Cp4.1LG12g07200 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g07200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Serine incorporator 3
Location	Cp4.1LG12 : 7064317 .. 7068341 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACCCGGTCGAGTCACCAGCCTAAGATAAGAGCGGCGTGAAGGGGTCAAATTGGAACGAGAGCTGTAAAGGAGACCAACGACAAAATACAAACCGAAGTGGGTTTCGAATCTTCATCTCCAGACGATCGTTCGAGTTGCTGGGAATTTTGTCCTCAAAATATCTTCTGAGGTAATTCTATGATCAATTTCTTGATTCTGCTGTAATTTAGTGTTCTTCCGCGTTACTTATCTCTGCAAAGGAAAACCCTTTAGGTCTTAACGATCACGGAAAAATCGAACAAGACGATATTGGTGTTGGTTTGAGGTTGATCAGAGGATTTGTTATTGGATTCATGTAGCTGCTTTTATTAATTGTTAATACGATTACCTCGATCATTTCTGGAAATAAATAGTTGTTCGGTTATGGAGAATTAGGTTTATTTGACGTACTTTTTCATTGGGTGATAACTTATTCGTCTAATTTAGGGTTTCGCTTACTTCACTTTTTGATAAAAATGTGAAGAGATTTACAATTTGATTTTCCATTGACTTGGGTCTGACTACTTGGCAGCTAAGCTTATAAACTGGTGCCAGTTTGAGGAAAAAAGATGTGGGCAGCATCTTGCCTTGCGTCGTGCTGTGCAGCTTGCGCATGTGATGCATGCCGTACGGTTGTTTCGAGTATTAGCCGTAGGTCTGCAAGGATTGCATACTGTGGCCTCTTCGCACTCTCTCTGATTGTTTCTTGGATTCTCAGAGAGGTCGCTGCTCCCCTTCTGGAGAAGATCCCTTGTGAGTCATGAATTTTCCTTTTCTTAAATGTCTATGGATTCGTAGAACAAGCAAGCGCTGATGGTCGAGTAATTTGTTTCTGTCCTAGCCACATCTTATCTTATGCTTATTTTGCAGAATCTAGATGGAATGCAAGAAACTTTCCTTTAGTGTAAAATAATATCTTATACATTGCGATCGGGTTCAAAGCGTTCACGAATTTTATATTTCCAAATGCATCTATTGCTCTTAGACATTAATGATGTCATATTGAGAGATGAGATCACTTTTATGATATCCCTTTTTTTTTTTTACAGATTACTTATTACTTATAATGTAGATATATTCTTATTATTCTAGAATCGTCTAGTGTAAATTGCTTGTGATTAATCAGCTGTTTTTTTAGCCAAGGGCATTTGTTATTGGCCATTTGGAAGCATTTTTTTCTGTTGCTTCTAATCATCAAGCTTGCGGTTTGTTATTTAGCTGCATTAAGTGGTACTTACTACTCAGAACCACTGTTGGATAATAATGAAATATTGTCAACTCTAAAAGGACTTCCTCCTGTCTCCAAACAAATCACATAGCTGGTTTGACTGATACTTTTGAAGTGTTTAACAGTTTTTTTTTTTTTAATGTATGTCTTCTTTCAGGGATTAATACTTTCCATGAAACACCTAGCAGAGATTGGTTTCAAACTGATGCAGTCTTGCGGGTTAGCTTGGGAAATTTTCTCTTCTTCACCATTCTATCTGTAATGATGGTTGGTGTAAAAAGTCAAAGGGATCCCCGTGATGGTATTCACCACGGTGGATGGATGGTGAAAGTTATTTGTTGGTTCCTTCTGGTGGTACTAATGTTTTTCATTCCAAATGAGATTATTGCCTTTTATGGTAAGAAATTATTTCAGCATGTCAGAAATTAGAATGATGTTTTACAAAGACTGTTCAAAATGGTTTAATTTGAGATACTTTTCCTTCTTCTTTCTTTAAAATGGTATTAACATATTCGACATTTCCAGAGTCTATATCAAAATTTGGCTCAGGACTGTTTCTTCTCGTCCAAGTTGTTCTTTTGCTGGATTTTGTTCACAGATGGAATGACACCTGGGTTGGATATGATGAGCAATTTTGGTTTGTTGACTTCTAGTTTCTTCTCTTGTCTCCTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCNTTTCTGTTATCTTGCAACATTTGTCTCGTCTGGATTTCTCTTTCACTGGTTCACACCATCAGGACATGACTGTGGGCTCAACACCTTCTTTATAGTCATGGCCCTAATTTTTGCGTTTGTTTTCACAGTTGTTGCACTACACCCTTCAGTAAGTATTTCCCTCTTTCATCTTGCATCAATCAAACTGTCTCATTAGAGGTCAATTCATGATTGTGCATATCTATATATATCTCCTTCCCCTTCCTCTCGTTTATCTTTTTGCCCTACAAATTAGAATTACTTTGTTCTCATTTTACCTCCATTGATGGGTAGCTGTAACTATAAGGCTCTTGATAATAGATTTGGCTAATGACCAAGTTGTTGTACCATGATACTCATTTCATTGTCTCTTGGTCATACCAGCTAGCGGTACAAGTTCAAACCTTTGGGTGAACTTAATACCAAAAATCCTTGATGCCTCCCAGGTTTGGGTCTTGAGGCAGTGCTGAGTGTCCTCGGGTATAGGGGAGACCGGTTATAAAAAATAAAAAATGAAAAATATAATAATAATAATGCCCTTCTTCTGGACAATGATACCGTATTGTAAGTTAATACAGTGGTTGGATCTCAATTTAAAAAATATTGTAAACCTGTGATGTGTATATATATATATATATATATATATATATGTTTTAGTGTTATAATCAAGTATGACGTGCATTTGGGGACTTTTTTAAATACAGAGGACCTCTTTCTTTTTGTCTCTTATTACTTTCATCTTGATGAAAAAAACAGGTTGGTGGCAGTGTTTTACCTGCATCAGTCATCTCGTTGTACTGCATGTATCTCTGTTACAGTGGGCTTGCTAGTGAACCAAGAGACTATGAATGTAATGGTCTCCACAAGCATTCCAAGGCTGTTTCTACTGGCACTCTTGCCTTGGGTCTTCTCACCACTGTTCTATCAGTAGTCTATTCTGCTGTTCGTGCTGGTTCTTCTACAACCTTGCTTTCTCCTCCAAGTTCACCCGGTGCGGGTAAGAGTCTGCTAAGTTATTTTACTATTACTATTATTATTATTTTGGCTTTTACAGTTCAGAAACACACAGTATTATATAAGGTTATGTTTTATGTGTTGATTTCAATTGTCTCAATGGAGATTGGGTTCACGTTCATACACAGAACTAACAAATCTTGAACTTTGGAAATTTCTACTATTGACTTCCTAAGAAGTGTGCATGATACTAATATTACATTAAGCAAGATATGATTGGGTGTACTTCCTTCAAACTTCTGGACATCGTAACCATTTTTTAAGTTGTTCATGACTTCTGTCTGTTGCCTCATATATTAATTTTATAGGCAACTTTGTTAAATTTCTTGTGGGACATGTCCTTTAACAGGGCGGGGAATCTCCATTTCAAGTGGGGAGAGAGATTTTCTCGCTCGATTTTGTTTGTAGCCTCTCGTGTATTAAGCTCGTTAGGTATGACATTCTTGGTTCTCTGTCAAATGGGCAGGAAAGCCATTGCTTCCATTGGAGAAGTCAGATGAGCACGAGGAAAAAGAGAAGGCAAAGCCAGTTACATATTCATATTCATTTTTCCACATCATCTTCTCTCTTGCTAGTATGTACTCAGCAATGCTCCTGACTGGATGGACTAGCTCTGTTGGCGGGAGTGGCAGGTTGGTCGATGTCGGGTGGTCATCCGTGTGGGTTCGGGTTGTGACTAGTTGGGCTACTGCAGCATTGTTCATCTGGTCTTTGATTGCCCCCGTCCTGTTTCCAGACCGGGACTTCTAGCGGCTTACTCGTCGAACTTGTGATGTCGATGTGTCTAAGTAAGTTCTATTGCGTGCACGTATGATGTACATGAAAATTTCCAGTGTGTATATGGTAAGCCTGGAGGATGGCTTTAAAACTGGACCTTGAACTTGTTTGGAAGACGTTATTCACTTGCATATGGTGACTTAAGAAAGTTATAATATAGACTCCAAAACAGTGCCTTGAGTGATTGATCCTGTGAGAAATTCTAACTTTTAAATAACAT

mRNA sequence

CGAACCCGGTCGAGTCACCAGCCTAAGATAAGAGCGGCGTGAAGGGGTCAAATTGGAACGAGAGCTGTAAAGGAGACCAACGACAAAATACAAACCGAAGTGGGTTTCGAATCTTCATCTCCAGACGATCGTTCGAGTTGCTGGGAATTTTGTCCTCAAAATATCTTCTGAGCTAAGCTTATAAACTGGTGCCAGTTTGAGGAAAAAAGATGTGGGCAGCATCTTGCCTTGCGTCGTGCTGTGCAGCTTGCGCATGTGATGCATGCCGTACGGTTGTTTCGAGTATTAGCCGTAGGTCTGCAAGGATTGCATACTGTGGCCTCTTCGCACTCTCTCTGATTGTTTCTTGGATTCTCAGAGAGGTCGCTGCTCCCCTTCTGGAGAAGATCCCTTGGATTAATACTTTCCATGAAACACCTAGCAGAGATTGGTTTCAAACTGATGCAGTCTTGCGGGTTAGCTTGGGAAATTTTCTCTTCTTCACCATTCTATCTGTAATGATGGTTGGTGTAAAAAGTCAAAGGGATCCCCGTGATGGTATTCACCACGGTGGATGGATGGTGAAAGTTATTTGTTGGTTCCTTCTGGTGGTACTAATGTTTTTCATTCCAAATGAGATTATTGCCTTTTATGAGTCTATATCAAAATTTGGCTCAGGACTGTTTCTTCTCGTCCAAGTTGTTCTTTTGCTGGATTTTGTTCACAGATGGAATGACACCTGGGTTGGATATGATGAGCAATTTTGGTTTGTTGACTTCTAGTTTCTTCTCTTGTCTCCTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCNTTTCTGTTATCTTGCAACATTTGTCTCGTCTGGATTTCTCTTTCACTGGTTCACACCATCAGGACATGACTGTGGGCTCAACACCTTCTTTATAGTCATGGCCCTAATTTTTGCGTTTGTTTTCACAGTTGTTGCACTACACCCTTCAGTTGGTGGCAGTGTTTTACCTGCATCAGTCATCTCGTTGTACTGCATGTATCTCTGTTACAGTGGGCTTGCTAGTGAACCAAGAGACTATGAATGTAATGGTCTCCACAAGCATTCCAAGGCTGTTTCTACTGGCACTCTTGCCTTGGGTCTTCTCACCACTGTTCTATCAGTAGTCTATTCTGCTGTTCGTGCTGGTTCTTCTACAACCTTGCTTTCTCCTCCAAGTTCACCCGGTGCGGGAAAGCCATTGCTTCCATTGGAGAAGTCAGATGAGCACGAGGAAAAAGAGAAGGCAAAGCCAGTTACATATTCATATTCATTTTTCCACATCATCTTCTCTCTTGCTAGTATGTACTCAGCAATGCTCCTGACTGGATGGACTAGCTCTGTTGGCGGGAGTGGCAGGTTGGTCGATGTCGGGTGGTCATCCGTGTGGGTTCGGGTTGTGACTAGTTGGGCTACTGCAGCATTGTTCATCTGGTCTTTGATTGCCCCCGTCCTGTTTCCAGACCGGGACTTCTAGCGGCTTACTCGTCGAACTTGTGATGTCGATGTGTCTAAGTAAGTTCTATTGCGTGCACGTATGATGTACATGAAAATTTCCAGTGTGTATATGGTAAGCCTGGAGGATGGCTTTAAAACTGGACCTTGAACTTGTTTGGAAGACGTTATTCACTTGCATATGGTGACTTAAGAAAGTTATAATATAGACTCCAAAACAGTGCCTTGAGTGATTGATCCTGTGAGAAATTCTAACTTTTAAATAACAT

Coding sequence (CDS)

ATGGCTGACCAATCAACCCCGCNTTTCTGTTATCTTGCAACATTTGTCTCGTCTGGATTTCTCTTTCACTGGTTCACACCATCAGGACATGACTGTGGGCTCAACACCTTCTTTATAGTCATGGCCCTAATTTTTGCGTTTGTTTTCACAGTTGTTGCACTACACCCTTCAGTTGGTGGCAGTGTTTTACCTGCATCAGTCATCTCGTTGTACTGCATGTATCTCTGTTACAGTGGGCTTGCTAGTGAACCAAGAGACTATGAATGTAATGGTCTCCACAAGCATTCCAAGGCTGTTTCTACTGGCACTCTTGCCTTGGGTCTTCTCACCACTGTTCTATCAGTAGTCTATTCTGCTGTTCGTGCTGGTTCTTCTACAACCTTGCTTTCTCCTCCAAGTTCACCCGGTGCGGGAAAGCCATTGCTTCCATTGGAGAAGTCAGATGAGCACGAGGAAAAAGAGAAGGCAAAGCCAGTTACATATTCATATTCATTTTTCCACATCATCTTCTCTCTTGCTAGTATGTACTCAGCAATGCTCCTGACTGGATGGACTAGCTCTGTTGGCGGGAGTGGCAGGTTGGTCGATGTCGGGTGGTCATCCGTGTGGGTTCGGGTTGTGACTAGTTGGGCTACTGCAGCATTGTTCATCTGGTCTTTGATTGCCCCCGTCCTGTTTCCAGACCGGGACTTCTAG

Protein sequence

MADQSTPXFCYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVISLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLLSPPSSPGAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF

Homology

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BLAST of Cp4.1LG12g07200 vs. Swiss-Prot
Match: SERIC_NEMVE (Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 89/254 (35.04%), Postives = 128/254 (50.39%), Query Frame = 1


Query: 13  ATFVSSGF-------LFHWFTPSGHD-CGLNTFFIVMALIFAFVFTVVALHPSVG----- 72
           ATF+  GF       L+ +FT S    C  N FFI   LI   + +V+A+HP V      
Sbjct: 203 ATFLMYGFCVAGIVCLYVYFTYSQESSCHTNKFFISFNLILCIIASVLAIHPKVQERLPT 262

Query: 73  GSVLPASVISLYCMYLCYSGLASEPRDYECNGLHK-HSKAVSTGTLAL-GLLTTVLSVVY 132
             +L ASVISLY +YL +S L+ +P D  CNG ++ H       + A+ G++   + VVY
Sbjct: 263 SGLLQASVISLYTVYLTWSALSFQP-DKNCNGFYETHITLAGMDSQAIIGVILMFVMVVY 322

Query: 133 SAVRAGSSTT-----LLSPPSSPGAGKPLLPLEKSDEHEEK---------------EKAK 192
           ++VR  SS+      + SP  S    K    L + DE                   ++  
Sbjct: 323 ASVRTASSSQVGKLGMSSPKHSSALDKETTVLSEGDETRSDVGLVEEGGEGRRVYDDEDG 382

Query: 193 PVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVRVVTSWATAALFI 232
            V YSYSF+H +  LAS+Y  M LT W   VG     +    ++VWV++ +SW    ++I
Sbjct: 383 GVAYSYSFYHFMLMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYI 442

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BLAST of Cp4.1LG12g07200 vs. Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.0e-21
Identity = 78/256 (30.47%), Postives = 124/256 (48.44%), Query Frame = 1


Query: 21  LFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSV-----GGSVLPASVISLYCMYL 80
           +FH++T    DC L+ FFI   L  A + T+ ++ PSV        +L +SV++ Y  YL
Sbjct: 235 MFHFYTNG--DCKLSNFFIGFNLALALLVTLTSMLPSVREALPSSGILQSSVVAAYATYL 294

Query: 81  -----------CYSGLASEP-----------------RDYECNGLHKHSKAVSTGTLALG 140
                      C+  +A  P                 +  EC G        +T  + +G
Sbjct: 295 VWSAVSGVPSTCHPLIAVAPLFLSSRGFLPPLPYVALKPAECGG----DAGTNTAAIVIG 354

Query: 141 LLTTVLSVVYSAVRAGSSTTLLSPPSSPGAGKPLLPLEKS----DEHEEKEKAKPVT--- 200
            L T +SV YS++R  S + L       G+ + +  ++      DE +E  + + V    
Sbjct: 355 ALLTFISVAYSSIRTSSKSQLGKLGLQQGSNENIYLMDDKAADFDEDDEDRRLQRVVDNE 414

Query: 201 -----YSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVRVVTSWATAAL 232
                YS+SFFH+ F++A++Y  M+LT W SS   +   +  GW+SVWV+VV+SW    L
Sbjct: 415 QDAVRYSWSFFHLTFAVAALYLMMVLTEWDSS--DADVRIGKGWASVWVQVVSSWVIFLL 474

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BLAST of Cp4.1LG12g07200 vs. Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.6e-21
Identity = 80/264 (30.30%), Postives = 133/264 (50.38%), Query Frame = 1


Query: 11  YLATFVSSGFLFHWFT-PSGHDCGLNTFFIVMALIFAFVFTVVALHPSVG-----GSVLP 70
           Y+ + + +G L+ ++T P G  C  N FFI   LI   V +V+++HP +        +L 
Sbjct: 213 YILSIIFAGLLYTYYTKPDG--CTENKFFISFNLILCVVISVLSIHPKIQEHQPRSGLLQ 272

Query: 71  ASVISLYCMYLCYSGLASEPRDYECN-GLHKHSKAVSTGTLA------------------ 130
           +S+I+LY MYL +S +++EP D  CN GL      +++ TLA                  
Sbjct: 273 SSLITLYTMYLTWSAMSNEP-DRSCNPGLLSIITHMTSSTLAPANTTAPAPTPAVPLQSG 332

Query: 131 --------LGLLTTVLSVVYSAVRAGSSTTLLSPPSSPGAGKPLLPLEKSDEHEEKEKAK 190
                   +GLL  VLS+ YS++R  SS + +S  +  G+   +L    ++   ++E  +
Sbjct: 333 PSLNKENFIGLLVFVLSLSYSSIR-NSSNSQVSKLTLSGSDSVILRDTAANGASDEEDGR 392

Query: 191 P----------VTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVRVV 232
           P          V Y+YS FH++   AS+Y  M LT W S       +    W +VWV++ 
Sbjct: 393 PRRAVDNEREGVQYNYSMFHLMLCSASLYIMMTLTNWYSPDANFQSMTSK-WPAVWVKIS 452

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BLAST of Cp4.1LG12g07200 vs. Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20
Identity = 80/266 (30.08%), Postives = 128/266 (48.12%), Query Frame = 1


Query: 11  YLATFVSSGFLFHWFT-PSGHDCGLNTFFIVMALIFAFVFTVVALHPSVG-----GSVLP 70
           Y+ + +  G L+ ++T P G  C  N FFI + LI   V +++++HP +        +L 
Sbjct: 214 YILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQ 273

Query: 71  ASVISLYCMYLCYSGLASEPRDYECN-GLHKHSKAVSTGTLA------------------ 130
           +SVI+LY MYL +S +++EP D  CN  L      ++  TLA                  
Sbjct: 274 SSVITLYTMYLTWSAMSNEP-DRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSG 333

Query: 131 --------LGLLTTVLSVVYSAVR------------AGSSTTLLSPPSSPGAGKPLLPLE 190
                   +GL   VL ++YS++R            +GS + +L   ++ GA        
Sbjct: 334 SLLDSDNFIGLFVFVLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTTSGASDEEDGQP 393

Query: 191 KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVR 232
           +     EKE    V YSYS FH++  LAS+Y  M LT W S      + +   W +VWV+
Sbjct: 394 RRAVDNEKEG---VQYSYSLFHLMLCLASLYIMMTLTSWYSP-DAKFQSMTSKWPAVWVK 453

[Close]

BLAST of Cp4.1LG12g07200 vs. Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.6e-20
Identity = 79/266 (29.70%), Postives = 128/266 (48.12%), Query Frame = 1


Query: 11  YLATFVSSGFLFHWFT-PSGHDCGLNTFFIVMALIFAFVFTVVALHPSVG-----GSVLP 70
           Y+ + +  G L+ ++T P G  C  N FFI + LI   V +++++HP +        +L 
Sbjct: 214 YILSIICVGLLYTYYTKPDG--CTENKFFISINLILCVVASIISIHPKIQEHQPRSGLLQ 273

Query: 71  ASVISLYCMYLCYSGLASEPRDYECN-GLHKHSKAVSTGTLA------------------ 130
           +S+I+LY MYL +S +++EP D  CN  L      ++  TLA                  
Sbjct: 274 SSLITLYTMYLTWSAMSNEP-DRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSG 333

Query: 131 --------LGLLTTVLSVVYSAVR------------AGSSTTLLSPPSSPGAGKPLLPLE 190
                   +GL   VL ++YS++R            +GS + +L   ++ GA        
Sbjct: 334 SLLDSDNFIGLFVFVLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTTSGASDEEDGQP 393

Query: 191 KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWSSVWVR 232
           +     EKE    V YSYS FH++  LAS+Y  M LT W S      + +   W +VWV+
Sbjct: 394 RRAVDNEKEG---VQYSYSLFHLMLCLASLYIMMTLTSWYSP-DAKFQSMTSKWPAVWVK 453

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BLAST of Cp4.1LG12g07200 vs. TrEMBL
Match: A0A0A0K8K4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431410 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-115
Identity = 210/223 (94.17%), Postives = 219/223 (98.21%), Query Frame = 1


Query: 9   FCYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVI 68
           FCY+ATFVSSG LFHWFTP+GHDCGLNTFFIVM LIFAF+FTVVALHP+VGGSVLPASVI
Sbjct: 189 FCYVATFVSSGLLFHWFTPAGHDCGLNTFFIVMTLIFAFIFTVVALHPAVGGSVLPASVI 248

Query: 69  SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTL 128
           SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTL+LGLLTTVLSVVYSAVRAGSSTTL
Sbjct: 249 SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLSLGLLTTVLSVVYSAVRAGSSTTL 308

Query: 129 LSPPSSPGAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 188
           LSPPSSP AGKPLLPLEK+DEHEEKEK+KPVTYSYSFFHIIFSLASMYSAMLLTGWT+SV
Sbjct: 309 LSPPSSPRAGKPLLPLEKADEHEEKEKSKPVTYSYSFFHIIFSLASMYSAMLLTGWTTSV 368

Query: 189 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           GGSGRLVDVGW+SVWVRVVT WATAALFIWSLIAPVLFPDRDF
Sbjct: 369 GGSGRLVDVGWASVWVRVVTGWATAALFIWSLIAPVLFPDRDF 411

[Close]

BLAST of Cp4.1LG12g07200 vs. TrEMBL
Match: M5XC36_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006404mg PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.8e-105
Identity = 193/224 (86.16%), Postives = 209/224 (93.30%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LI  F+F +VALHP+V GS+LPASVIS
Sbjct: 174 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLICVFLFLIVALHPAVNGSILPASVIS 233

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC YLCYS LASEPR+YECNGLHKHSKAVSTGTL LGLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 234 MYCTYLCYSALASEPREYECNGLHKHSKAVSTGTLTLGLLTTVLSVVYSAVRAGSSTTLL 293

Query: 130 SPPSSP--GAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP  GAGKPLLPL+K+DEHEEKEKAKPV+YSYSFFHIIFSLASMYSAMLLTGWT+S
Sbjct: 294 SPPSSPRAGAGKPLLPLDKADEHEEKEKAKPVSYSYSFFHIIFSLASMYSAMLLTGWTTS 353

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           VG SG+LVDVGW SVWVR+VTSWATA LFIWSL+AP+LFP+R+F
Sbjct: 354 VGESGKLVDVGWPSVWVRIVTSWATAGLFIWSLLAPILFPEREF 397

[Close]

BLAST of Cp4.1LG12g07200 vs. TrEMBL
Match: M5WS67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006404mg PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.8e-105
Identity = 193/224 (86.16%), Postives = 209/224 (93.30%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LI  F+F +VALHP+V GS+LPASVIS
Sbjct: 190 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLICVFLFLIVALHPAVNGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC YLCYS LASEPR+YECNGLHKHSKAVSTGTL LGLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 MYCTYLCYSALASEPREYECNGLHKHSKAVSTGTLTLGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSP--GAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP  GAGKPLLPL+K+DEHEEKEKAKPV+YSYSFFHIIFSLASMYSAMLLTGWT+S
Sbjct: 310 SPPSSPRAGAGKPLLPLDKADEHEEKEKAKPVSYSYSFFHIIFSLASMYSAMLLTGWTTS 369

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           VG SG+LVDVGW SVWVR+VTSWATA LFIWSL+AP+LFP+R+F
Sbjct: 370 VGESGKLVDVGWPSVWVRIVTSWATAGLFIWSLLAPILFPEREF 413

[Close]

BLAST of Cp4.1LG12g07200 vs. TrEMBL
Match: A0A078JW41_BRANA (BnaAnng35710D protein OS=Brassica napus GN=BnaAnng35710D PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.5e-104
Identity = 191/223 (85.65%), Postives = 207/223 (92.83%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LIF FVF VV LHP+VGGS+LPASVIS
Sbjct: 190 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLIFVFVFAVVVLHPAVGGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
            YCMYLCYSGLASEPRDYECNGLHKHSKAVSTGT+ +GLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 FYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSPGAGKPLLPLE-KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 189
           SPP SP AGKPLLPL+ K++E EEKE+ KPVTYSY+FFHIIFSLASMYSAMLLTGW++SV
Sbjct: 310 SPPDSPRAGKPLLPLDGKAEEKEEKEQKKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSV 369

Query: 190 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           G SG+LVDVGW SVWVRVVTSWATA LFIWS++AP+LFPDR+F
Sbjct: 370 GESGKLVDVGWPSVWVRVVTSWATAGLFIWSVVAPILFPDREF 412

[Close]

BLAST of Cp4.1LG12g07200 vs. TrEMBL
Match: R0GXA7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009295mg PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.3e-104
Identity = 191/223 (85.65%), Postives = 206/223 (92.38%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LIF FVF +V LHP+VGGS+LPASVIS
Sbjct: 190 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLIFVFVFAIVVLHPTVGGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGT+ +GLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSPGAGKPLLPLE-KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 189
           SPP SP A KPLLPL+ K+DE EEKE  KPV+YSY+FFHIIFSLASMYSAMLLTGW++SV
Sbjct: 310 SPPDSPRAEKPLLPLDGKADEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSV 369

Query: 190 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           G SG+LVDVGW SVWVRVVTSWATA LFIWSL+AP+LFPDR+F
Sbjct: 370 GESGKLVDVGWPSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412

[Close]

BLAST of Cp4.1LG12g07200 vs. TAIR10
Match: AT1G16180.1 (AT1G16180.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 383.6 bits (984), Expect = 8.3e-107
Identity = 188/223 (84.30%), Postives = 206/223 (92.38%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SGFLFHWFTPSGHDCGLNTFFI+M LIF FVF +V LHP+VGGS+LPASVIS
Sbjct: 190 CYLATFVFSGFLFHWFTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           LYCMYLCYSGLASEPRDYECNGLH HSKAVSTGT+ +GLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 LYCMYLCYSGLASEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSPGAGKPLLPLE-KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 189
           SPP SP A KPLLP++ K++E EEKE  KPV+YSY+FFHIIFSLASMYSAMLLTGW++SV
Sbjct: 310 SPPDSPRAEKPLLPIDGKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSV 369

Query: 190 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           G SG+LVDVGW SVWVRVVTSWATA LFIWSL+AP+LFPDR+F
Sbjct: 370 GESGKLVDVGWPSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412

[Close]

BLAST of Cp4.1LG12g07200 vs. TAIR10
Match: AT3G06170.1 (AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 288.1 bits (736), Expect = 4.8e-78
Identity = 145/224 (64.73%), Postives = 180/224 (80.36%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CY+AT+  SG LF WF PSG DCGLN FFIVM +I AFVF ++ALHP+V GS+LPASVIS
Sbjct: 187 CYIATYTFSGILFIWFNPSGQDCGLNVFFIVMPMILAFVFAIIALHPAVNGSLLPASVIS 246

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC Y+CY+GL+SEP DY CNGL+K SKAV+  TL LG+LTTVLSV+YSA+RAGSSTT L
Sbjct: 247 VYCAYVCYTGLSSEPHDYVCNGLNK-SKAVNASTLILGMLTTVLSVLYSALRAGSSTTFL 306

Query: 130 SPPSSPGAG--KPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP +G    LL   +  +   + +A+PV+YSYSFFHIIF+LASMY+AMLL+GWT S
Sbjct: 307 SPPSSPRSGVKDALLGDPEDGKKSGEAEARPVSYSYSFFHIIFALASMYAAMLLSGWTDS 366

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
              S  L+DVGW+SVWV++ T W TA L+IW+LIAP++ PDR+F
Sbjct: 367 -SESATLIDVGWTSVWVKICTGWVTAGLYIWTLIAPLILPDREF 408

[Close]

BLAST of Cp4.1LG12g07200 vs. TAIR10
Match: AT3G24460.1 (AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 68/219 (31.05%), Postives = 105/219 (47.95%), Query Frame = 1


Query: 11  YLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVISL 70
           Y    V    ++ W+ P    C LN FFI   L    + T +ALHP V    L  +++ L
Sbjct: 199 YTVCIVGVILMYIWYAPDS-SCLLNIFFITWTLFLIQLMTSIALHPKVNAGYLTPALMGL 258

Query: 71  YCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLLS 130
           Y +++C+  + SEP    CN       A S  T  L +++ V++++   +   S+     
Sbjct: 259 YVVFICWCAIRSEPVGESCN----RKAAASNRTDWLTIISFVVALLAMVIATFST----- 318

Query: 131 PPSSPGAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGG 190
                G        +K +  +E+E    V Y Y FFH +F+  +MY AMLL GW +    
Sbjct: 319 -----GIDSQCFQFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPM 378

Query: 191 SGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDR 230
               +DVGW+S WVRVV  W    ++IW L+AP++   R
Sbjct: 379 KKWTIDVGWTSTWVRVVNEWLAVCVYIWMLVAPLILKSR 402

[Close]

BLAST of Cp4.1LG12g07200 vs. TAIR10
Match: AT2G33205.1 (AT2G33205.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 1


Query: 21  LFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGG-SVLPASVISLYCMYLCYSG 80
           + ++F  +   CGLN FFI   +I   V  V++LH  V    +L + +++ Y ++LC+S 
Sbjct: 218 VMYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASYIVFLCWSA 277

Query: 81  LASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLLSPPSSPGAGK 140
           + SEP   +CN   ++S   +  T  L  L  + ++V +               S G   
Sbjct: 278 IRSEPSHTKCNAHTQNSH--TDWTTILSFLIAIGAIVMATF-------------STGIDS 337

Query: 141 PLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGW 200
                 K +  EE +    + YSY FFH++FSL +MY AML   W  S       +DVGW
Sbjct: 338 ESFRFRKDEAKEEDD----IPYSYGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGW 397

Query: 201 SSVWVRVVTSWATAALFIWSLIAPVL 226
           +S WV++V  W  AA+++W LIAP++
Sbjct: 398 TSTWVKIVNEWFAAAIYLWKLIAPIV 404

[Close]

BLAST of Cp4.1LG12g07200 vs. TAIR10
Match: AT4G13345.1 (AT4G13345.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 108.2 bits (269), Expect = 6.8e-24
Identity = 62/209 (29.67%), Postives = 98/209 (46.89%), Query Frame = 1


Query: 21  LFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVISLYCMYLCYSGL 80
           ++ W+ P    C LN FFI   L    + T ++LHP +    L  +++ LY +++C+  +
Sbjct: 202 MYIWYVPEP-SCLLNIFFITWTLFLIQLMTSISLHPKINAGFLTPALMGLYVVFICWCAI 261

Query: 81  ASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLLSPPSSPGAGKP 140
            SEP    CN   + S      T+ +  +  +L++V +               S G    
Sbjct: 262 RSEPVGETCNRKAEGSSRTDWLTI-ISFVVALLAMVIATF-------------STGVDSQ 321

Query: 141 LLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSVGGSGRLVDVGWS 200
                K + HEE      + Y Y FFH +F+  +MY AMLL GW          +DVGW+
Sbjct: 322 CFQFRKDENHEEDA----IPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWT 381

Query: 201 SVWVRVVTSWATAALFIWSLIAPVLFPDR 230
           S WVR+V  W    ++IW L+AP++   R
Sbjct: 382 STWVRIVNEWLAVGVYIWMLVAPMVLKSR 391

[Close]

BLAST of Cp4.1LG12g07200 vs. NCBI nr
Match: gi|778728890|ref|XP_011659493.1| (PREDICTED: probable serine incorporator [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.7e-115
Identity = 210/223 (94.17%), Postives = 219/223 (98.21%), Query Frame = 1


Query: 9   FCYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVI 68
           FCY+ATFVSSG LFHWFTP+GHDCGLNTFFIVM LIFAF+FTVVALHP+VGGSVLPASVI
Sbjct: 189 FCYVATFVSSGLLFHWFTPAGHDCGLNTFFIVMTLIFAFIFTVVALHPAVGGSVLPASVI 248

Query: 69  SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTL 128
           SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTL+LGLLTTVLSVVYSAVRAGSSTTL
Sbjct: 249 SLYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLSLGLLTTVLSVVYSAVRAGSSTTL 308

Query: 129 LSPPSSPGAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 188
           LSPPSSP AGKPLLPLEK+DEHEEKEK+KPVTYSYSFFHIIFSLASMYSAMLLTGWT+SV
Sbjct: 309 LSPPSSPRAGKPLLPLEKADEHEEKEKSKPVTYSYSFFHIIFSLASMYSAMLLTGWTTSV 368

Query: 189 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           GGSGRLVDVGW+SVWVRVVT WATAALFIWSLIAPVLFPDRDF
Sbjct: 369 GGSGRLVDVGWASVWVRVVTGWATAALFIWSLIAPVLFPDRDF 411

[Close]

BLAST of Cp4.1LG12g07200 vs. NCBI nr
Match: gi|595934413|ref|XP_007215457.1| (hypothetical protein PRUPE_ppa006404mg [Prunus persica])

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 193/224 (86.16%), Postives = 209/224 (93.30%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LI  F+F +VALHP+V GS+LPASVIS
Sbjct: 190 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLICVFLFLIVALHPAVNGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC YLCYS LASEPR+YECNGLHKHSKAVSTGTL LGLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 MYCTYLCYSALASEPREYECNGLHKHSKAVSTGTLTLGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSP--GAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP  GAGKPLLPL+K+DEHEEKEKAKPV+YSYSFFHIIFSLASMYSAMLLTGWT+S
Sbjct: 310 SPPSSPRAGAGKPLLPLDKADEHEEKEKAKPVSYSYSFFHIIFSLASMYSAMLLTGWTTS 369

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           VG SG+LVDVGW SVWVR+VTSWATA LFIWSL+AP+LFP+R+F
Sbjct: 370 VGESGKLVDVGWPSVWVRIVTSWATAGLFIWSLLAPILFPEREF 413

[Close]

BLAST of Cp4.1LG12g07200 vs. NCBI nr
Match: gi|595934406|ref|XP_007215456.1| (hypothetical protein PRUPE_ppa006404mg [Prunus persica])

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 193/224 (86.16%), Postives = 209/224 (93.30%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIVM LI  F+F +VALHP+V GS+LPASVIS
Sbjct: 174 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVMTLICVFLFLIVALHPAVNGSILPASVIS 233

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC YLCYS LASEPR+YECNGLHKHSKAVSTGTL LGLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 234 MYCTYLCYSALASEPREYECNGLHKHSKAVSTGTLTLGLLTTVLSVVYSAVRAGSSTTLL 293

Query: 130 SPPSSP--GAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP  GAGKPLLPL+K+DEHEEKEKAKPV+YSYSFFHIIFSLASMYSAMLLTGWT+S
Sbjct: 294 SPPSSPRAGAGKPLLPLDKADEHEEKEKAKPVSYSYSFFHIIFSLASMYSAMLLTGWTTS 353

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           VG SG+LVDVGW SVWVR+VTSWATA LFIWSL+AP+LFP+R+F
Sbjct: 354 VGESGKLVDVGWPSVWVRIVTSWATAGLFIWSLLAPILFPEREF 397

[Close]

BLAST of Cp4.1LG12g07200 vs. NCBI nr
Match: gi|645245398|ref|XP_008228861.1| (PREDICTED: probable serine incorporator [Prunus mume])

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-104
Identity = 192/224 (85.71%), Postives = 208/224 (92.86%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATFV SG LFHWFTPSGHDCGLNTFFIV  LI  F+F +VALHP+V GS+LPASVIS
Sbjct: 190 CYLATFVFSGLLFHWFTPSGHDCGLNTFFIVTTLICVFLFLIVALHPAVNGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
           +YC YLCYS LASEPR+YECNGLHKHSKAVSTGTL LGLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 MYCTYLCYSALASEPREYECNGLHKHSKAVSTGTLTLGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSP--GAGKPLLPLEKSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSS 189
           SPPSSP  GAGKPLLPL+K+DEHEEKEKAKPV+YSYSFFHIIFSLASMYSAMLLTGWT+S
Sbjct: 310 SPPSSPRAGAGKPLLPLDKADEHEEKEKAKPVSYSYSFFHIIFSLASMYSAMLLTGWTTS 369

Query: 190 VGGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           VG SG+LVDVGW SVWVR+VTSWATA LFIWSL+AP+LFP+R+F
Sbjct: 370 VGESGKLVDVGWPSVWVRIVTSWATAGLFIWSLLAPILFPEREF 413

[Close]

BLAST of Cp4.1LG12g07200 vs. NCBI nr
Match: gi|922553192|ref|XP_013604597.1| (PREDICTED: serine incorporator 3-like [Brassica oleracea var. oleracea])

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-104
Identity = 192/223 (86.10%), Postives = 207/223 (92.83%), Query Frame = 1


Query: 10  CYLATFVSSGFLFHWFTPSGHDCGLNTFFIVMALIFAFVFTVVALHPSVGGSVLPASVIS 69
           CYLATF+ SG LFHWFTPSGHDCGLNTFFIVM LIF FVF VV LHP+VGGS+LPASVIS
Sbjct: 190 CYLATFLFSGLLFHWFTPSGHDCGLNTFFIVMTLIFVFVFAVVVLHPAVGGSILPASVIS 249

Query: 70  LYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTLALGLLTTVLSVVYSAVRAGSSTTLL 129
            YCMYLCYSGLASEPRDYECNGLHKHSKAVSTGT+ +GLLTTVLSVVYSAVRAGSSTTLL
Sbjct: 250 FYCMYLCYSGLASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLL 309

Query: 130 SPPSSPGAGKPLLPLE-KSDEHEEKEKAKPVTYSYSFFHIIFSLASMYSAMLLTGWTSSV 189
           SPP SP AGKPLLPL+ K++E EEKE+ KPVTYSY+FFHIIFSLASMYSAMLLTGW++SV
Sbjct: 310 SPPDSPRAGKPLLPLDGKAEEKEEKEQKKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSV 369

Query: 190 GGSGRLVDVGWSSVWVRVVTSWATAALFIWSLIAPVLFPDRDF 232
           G SG+LVDVGW SVWVRVVTSWATA LFIWSLIAP+LFPDR+F
Sbjct: 370 GESGKLVDVGWPSVWVRVVTSWATAGLFIWSLIAPILFPDREF 412

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SERIC_NEMVE	3.0e-26	35.04	Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1	[more]
SERIC_MONBE	5.0e-21	30.47	Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1	[more]
SERC3_BOVIN	6.6e-21	30.30	Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1	[more]
SERC3_PONAB	2.5e-20	30.08	Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1	[more]
SERC3_HUMAN	5.6e-20	29.70	Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2	[more]

BLAST of Cp4.1LG12g07200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8K4_CUCSA	1.9e-115	94.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431410 PE=4 SV=1	[more]
M5XC36_PRUPE	1.8e-105	86.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006404mg PE=4 SV=1	[more]
M5WS67_PRUPE	1.8e-105	86.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006404mg PE=4 SV=1	[more]
A0A078JW41_BRANA	1.5e-104	85.65	BnaAnng35710D protein OS=Brassica napus GN=BnaAnng35710D PE=4 SV=1	[more]
R0GXA7_9BRAS	3.3e-104	85.65	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009295mg PE=4 SV=1	[more]

BLAST of Cp4.1LG12g07200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16180.1	8.3e-107	84.30	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT3G06170.1	4.8e-78	64.73	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT3G24460.1	1.5e-26	31.05	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT2G33205.1	4.0e-24	32.04	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT4G13345.1	6.8e-24	29.67	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]

BLAST of Cp4.1LG12g07200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728890\|ref\|XP_011659493.1\|	2.7e-115	94.17	PREDICTED: probable serine incorporator [Cucumis sativus]	[more]
gi\|595934413\|ref\|XP_007215457.1\|	2.5e-105	86.16	hypothetical protein PRUPE_ppa006404mg [Prunus persica]	[more]
gi\|595934406\|ref\|XP_007215456.1\|	2.5e-105	86.16	hypothetical protein PRUPE_ppa006404mg [Prunus persica]	[more]
gi\|645245398\|ref\|XP_008228861.1\|	1.3e-104	85.71	PREDICTED: probable serine incorporator [Prunus mume]	[more]
gi\|922553192\|ref\|XP_013604597.1\|	1.6e-104	86.10	PREDICTED: serine incorporator 3-like [Brassica oleracea var. oleracea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005016	TDE1/TMS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07200.1	Cp4.1LG12g07200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005016	Serine incorporator/TMS membrane protein	PANTHER	PTHR10383	SERINE INCORPORATOR	coord: 10..231 score: 1.2E
IPR005016	Serine incorporator/TMS membrane protein	PFAM	PF03348	Serinc	coord: 9..230 score: 1.0
None	No IPR available	PANTHER	PTHR10383:SF25	SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN	coord: 10..231 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g07200	Cucsa.106000	Cucumber (Gy14) v1	cgycpeB0229
Cp4.1LG12g07200	CmaCh17G009050	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g07200	CmaCh08G005840	Cucurbita maxima (Rimu)	cmacpeB902
Cp4.1LG12g07200	CmoCh08G005750	Cucurbita moschata (Rifu)	cmocpeB839
Cp4.1LG12g07200	Cla015314	Watermelon (97103) v1	cpewmB131
Cp4.1LG12g07200	Csa7G431410	Cucumber (Chinese Long) v2	cpecuB161
Cp4.1LG12g07200	MELO3C023477	Melon (DHL92) v3.5.1	cpemeB123
Cp4.1LG12g07200	ClCG09G003420	Watermelon (Charleston Gray)	cpewcgB126
Cp4.1LG12g07200	CSPI07G20020	Wild cucumber (PI 183967)	cpecpiB163
Cp4.1LG12g07200	Lsi02G026550	Bottle gourd (USVL1VR-Ls)	cpelsiB113
Cp4.1LG12g07200	MELO3C023477.2	Melon (DHL92) v3.6.1	cpemedB150
Cp4.1LG12g07200	CsaV3_7G031800	Cucumber (Chinese Long) v3	cpecucB0188
Cp4.1LG12g07200	Bhi09G000442	Wax gourd	cpewgoB0201
Cp4.1LG12g07200	CsGy7G018300	Cucumber (Gy14) v2	cgybcpeB906
Cp4.1LG12g07200	Carg13496	Silver-seed gourd	carcpeB0631
Cp4.1LG12g07200	Carg18727	Silver-seed gourd	carcpeB0493

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g07200	Cp4.1LG17g08550	Cucurbita pepo (Zucchini)	cpecpeB157

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g07200	Cucumber (Gy14) v2	cgybcpeB308
Cp4.1LG12g07200	Silver-seed gourd	carcpeB1144
Cp4.1LG12g07200	Cucurbita pepo (Zucchini)	cpecpeB181
Cp4.1LG12g07200	Cucurbita pepo (Zucchini)	cpecpeB185
Cp4.1LG12g07200	Cucurbita maxima (Rimu)	cmacpeB260
Cp4.1LG12g07200	Cucurbita maxima (Rimu)	cmacpeB465
Cp4.1LG12g07200	Cucurbita moschata (Rifu)	cmocpeB224
Cp4.1LG12g07200	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g07200	Cucurbita moschata (Rifu)	cmocpeB425
Cp4.1LG12g07200	Wild cucumber (PI 183967)	cpecpiB138
Cp4.1LG12g07200	Cucumber (Chinese Long) v2	cpecuB137
Cp4.1LG12g07200	Bottle gourd (USVL1VR-Ls)	cpelsiB116
Cp4.1LG12g07200	Watermelon (Charleston Gray)	cpewcgB134
Cp4.1LG12g07200	Melon (DHL92) v3.5.1	cpemeB133