Cp4.1LG12g06500 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGTATTAAGAATTTTAAAAATATTACAAGAAATTGAAACTAGGAAAAGGAAATAGAACAAATATAATTTGCTTTTGAACATAAAGCAGCAGAAGAAAGAAAACACGAAAATCAATCATCAACTAACAACTCCCAGATATTTCTAGAATTGTAAGGAATTAGACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTATGTGTCGACGAAAACTGATAACGGCTCGGGCACACCGATGGCGTAAGAGACCTGGACAATGCACCTCCGTGCAAGCCCACTGGCAACTATGCTCTTAGCAGCCTGCCTGACGATGTAGGCACCACTCCTATCGACCTTGGTGGGATCCTTTCCGGAGAAAGCACCACCACCGTGGGCTCCCCAACCACCGTAGGTGTCGATGATGATCTTGCGTCCGGTAAGACCTGCATCACCATGGGGACCGCCAATGACAAATCGGCCTGAGGGGTTAAGGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAGGACATGGCTAAGGGGCATCAATTCAGGGGTCTCGTCAGTGGCATAGCCAAACATATGGCCTTGGTCACCAGCGCCAATCTCCTCAGGGCGCTTTGTGAAGTGGCCGTGAACACCCTGAGCAATATCTGGGCTCTGCTGCTCAATGTTAACCAGGACCTTGCAATTGTCAGCATCAAGACCAACATCGTCGGAAACGAATCCAATTTCTCGGCATGTGTCACGGACAATCTTTTCGTAGTCCACATTGGCCTTGGTAGTGATCTCTCCAAAGACCATGACCATGTTGGTCTTACTGCAGGTCTCACATGCGACCTTGCTGTCAGGGTCCTGAGCTAGGCAAGCGTCGAGCACCGCATCAGAGATCTGGTCACAGAGCTTGTCGGGGTGACCCTCATTTACGGATTCAGAGGTAAATAGAAAGGTCTCCATCTCTGAAACATAACAAACACCATATTAGATCGTGTACAAAAATATTCAGTTCATTCATTATGTCAATTGTTAACCTTTCTGTTCCAATTTAGTCACATCAATTAGGCAGAAACATCTTGTATGTTGTTAAAGATTGGAAACAATCATCAGTTACAAGAGCAAGCTCGACGCATACTCATCTTGAAATCAAAACAGGATTACAGAAATCTGGGTGATACAAGCACAGATCAAAGCAACTTTTCGAAATTTTTAATGAATGGAATGACGCCATGGTTCGAAAGTAGCCTTGACAAATCTGAACAGTCCAACAGGGTTCGAAGGTAGGGAAACAAAATCAAACTTGGAAAATTCAAGATCTGTCCTGAGGAATCCTTAACAATTCGACTGGATCTACAATTCGACCACAGAGATCGTTCGCTACCAAATCGAATTACCAGCAACAATAAGAAATTGAGAAAACAAAAACAAAAACAAAAATCTTTGATCTAACCATGGATCTAGGGAATCCTAAAATTGTTACACGAAAACCGCGGGAAACCAGTACGCCGACATGATCTTTTTTCTTTTACTTACAAATCGGATCGTGCTATTCAACAAACAGTTTGTGGTGACAAACAAAAGCTGACAACCAAAACAGAGCTACCAGAGAAACATAAAGAAAAAGCCCCAAACACCCGAGATCCCGAATCTCAGAGAGCACAAAACAGTATCGAAGTTACAATCACTAGTTCCAGATGAATTCTTTTTTTAAAAAATGTCAGATCTGCAAGATTTCACATCTCAGAAAAAGAGAAACAGAGTTCATAGCAACATACAAGCACCAGACACCCGATTCAAACAAAATGAGTACCACTAGCTTACATAGCAGAAAAAAAAAACCCCAAATTCGTTCAGAAACCAGGAGAAAAAAGGGGAAATGAAGAACCACAAGCATGCTCAAAGCCTCATGAAATTAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAGAAAGAAATGGCAATGAACGAGCGGTAGAACAGAGCTCGCAAACCTGGTGATATCGGCTGCGTAGATCTGGAAGAGAGAAAGAATTTGAGCTAATACGCCAACCGAACCAGACCTCTGTAAGAAGGCGAAGCTCAACGGTACAAGG ATGGATAACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAGGACATGGCTAAGGGGCATCAATTCAGGGGTCTCGTCAGTGGCATAGCCAAACATATGGCCTTGGTCACCAGCGCCAATCTCCTCAGGGCGCTTTGTGAAGTGGCCGTGAACACCCTGAGCAATATCTGGGCTCTGCTGCTCAATGTTAACCAGGACCTTGCAATTGTCAGCATCAAGACCAACATCGTCGGAAACGAATCCAATTTCTCGGCATGTGTCACGGACAATCTTTTCGTAGTCCACATTGGCCTTGGTAGTGATCTCTCCAAAGACCATGACCATGTTGGTCTTACTGCAGGTCTCACATGCGACCTTGCTGTCAGGGTCCTGAGCTAGGCAAGCGTCGAGCACCGCATCAGAGATCTGGTCACAGAGCTTGTCGGGGTGACCCTCATTTACGGATTCAGAGGTAAATAGAAAGGTCTCCATCTCTGAAACATAACAAACACCATATTAGATCGTGTACAAAAATATTCAGTTCATTCATTATGTCAATTGTTAACCTTTCTGTTCCAATTTAGTCACATCAATTAGGCAGAAACATCTTGTATGTTGTTAAAGATTGGAAACAATCATCAGTTACAAGAGCAAGCTCGACGCATACTCATCTTGAAATCAAAACAGGATTACAGAAATCTGGGTGATACAAGCACAGATCAAAGCAACTTTTCGAAATTTTTAATGAATGGAATGACGCCATGGTTCGAAAGTAGCCTTGACAAATCTGAACAGTCCAACAGGGTTCGAAGGTAGGGAAACAAAATCAAACTTGGAAAATTCAAGATCTGTCCTGAGGAATCCTTAACAATTCGACTGGATCTACAATTCGACCACAGAGATCGTTCGCTACCAAATCGAATTACCAGCAACAATAAGAAATTGAGAAAACAAAAACAAAAACAAAAATCTTTGATCTAACCATGGATCTAGGGAATCCTAAAATTGTTACACGAAAACCGCGGGAAACCAGTACGCCGACATGATCTTTTTTCTTTTACTTACAAATCGGATCGTGCTATTCAACAAACAGTTTGTGGTGACAAACAAAAGCTGACAACCAAAACAGAGCTACCAGAGAAACATAAAGAAAAAGCCCCAAACACCCGAGATCCCGAATCTCAGAGAGCACAAAACAGTATCGAAGTTACAATCACTAGTTCCAGATGAATTCTTTTTTTAAAAAATGTCAGATCTGCAAGATTTCACATCTCAGAAAAAGAGAAACAGAGTTCATAGCAACATACAAGCACCAGACACCCGATTCAAACAAAATGAGTACCACTAGCTTACATAGCAGAAAAAAAAAACCCCAAATTCGTTCAGAAACCAGGAGAAAAAAGGGGAAATGAAGAACCACAAGCATGCTCAAAGCCTCATGAAATTAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAGAAAGAAATGGCAATGAACGAGCGGTAGAACAGAGCTCGCAAACCTGGTGATATCGGCTGCGTAGATCTGGAAGAGAGAAAGAATTTGAGCTAATACGCCAACCGAACCAGACCTCTGTAAGAAGGCGAAGCTCAACGGTACAAGG ATGGATAACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAG MDNQPDGMISLRLRLLPLEWLDNLPGEVRVLPSEVSICCCLQESPIATPLQIKVDGDHSGPEVEVLLHDFQDFLVGDLTGFVEDGLLVEVLLGDDGLDDMLFEVCSDLVVGDGLIVLGGDQNCVHTDGYHGAIVVVVLDSNLGLAIRSQPGAGAILSNFSETSAQLGG
BLAST of Cp4.1LG12g06500 vs. TrEMBL
Match: A0A0P0V1R5_ORYSJ (Os01g0323775 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0323775 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 7.2e-24 Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. TrEMBL
Match: J3KZC6_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20 Identity = 66/149 (44.30%), Postives = 88/149 (59.06%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. TrEMBL
Match: A0A0V0YYS2_9BILA (Uncharacterized protein (Fragment) OS=Trichinella patagoniensis GN=T12_14541 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. TrEMBL
Match: A0A0S3R8M6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G507600 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.5e-17 Identity = 45/86 (52.33%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. TrEMBL
Match: A0A0S3R8R5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G507800 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16 Identity = 46/86 (53.49%), Postives = 67/86 (77.91%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: gi|937895881|dbj|BAS71861.1| (Os01g0323775, partial [Oryza sativa Japonica Group]) HSP 1 Score: 118.6 bits (296), Expect = 1.0e-23 Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: gi|954326433|gb|KRY05292.1| (hypothetical protein T12_14541, partial [Trichinella patagoniensis]) HSP 1 Score: 104.0 bits (258), Expect = 2.6e-19 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: gi|965660578|dbj|BAT76997.1| (hypothetical protein VIGAN_01507600 [Vigna angularis var. angularis]) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 45/86 (52.33%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: gi|965660580|dbj|BAT76999.1| (hypothetical protein VIGAN_01507800 [Vigna angularis var. angularis]) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-16 Identity = 46/86 (53.49%), Postives = 67/86 (77.91%), Query Frame = 1
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: gi|673045543|ref|XP_008876732.1| (hypothetical protein H310_11742 [Aphanomyces invadans]) HSP 1 Score: 65.9 bits (159), Expect = 7.9e-08 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |