Cp4.1LG12g06070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g06070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein trm112, putative
LocationCp4.1LG12 : 7753827 .. 7758204 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCATATATTTTCATATTAAATAAATCCTGCCGCGAACGCTACTCTCTCTCTCTCCCCCAACAGGCTGCTTCAAGTGAAGCTTACTCTCCCAATATTGAACCCTAAACCCTCCCAGATCGCGAAGCGCAAATTTAGACGAGTTTCCACCGGTAGATGGTGGCGGCCGCAATCAGAACACCATAAGCAGTTCCTATCATCTTGTACCATCCGATCGCTTCGATCTTCTTCGGTAAGAACTCTGAGTTCTTTTCTAGATCCACCGTTTTCTTTGATTTTCGATTTTTTTTCGTTGGATTGTACGTATGTTTAATGTATGCGTTCTCTTTTGTCTCTTATTTGTTGAATTGGTGATTTGTACTCTTTCCGTTTTGGATTTTTTGGATTTGAATTTGATTTCGGGTAGGTGCAAGGGCTGGTTTTCTGTGCATTTTTTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGGGGATGGATTTGAGAGACTGCGATGGATGGTGTGGTGTTGAGTTTGATTGTATTTCATGGGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGAAAATAAGCCAAAAAGGAGCAATCCATCAGAGCCGTTTTACTGGAATGGGGTGTTGGATGATGGAAGTCTCACATCGATTACTTTAGGGAATGATCATGAGTTTATAAGTGAGGAATACTAACTCCATTGGCATGAGGCATTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGTCATGTTCGTCTAACCTGGGGTGCTCCATACAGCAGAGGAGGGGAGGATTAGATTAGTATATTAGCAGAGATACATAACAATATGAATAAAAAGATAGCATAAGAACCAAAATCAATGAGTTTCTGTGATACATTACTTCAAAGATGAGGGAGGTTACAATTCCTTTTGGGTGTTTGGAACTAGAAAATTTTATGGTTATTTCTTATTTTAAACCATTCAAGCCCTTTTGCTGTAGAATAGATCAACCCAGTTCCCGCTTTTTCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCTGGCCGATCATTCCGCTGGCATCTTGCATTCACGCCTCTGTTTGACTGCCGCTCGGGGTTATATTTGTAGATTATATTAAGGAGATATTTCATCGAGTTGAAATTTGCCTGATTCATTAGATACATGTTAGTCAAAACAGGTTTTGAGATAATTTGTTTGATTTATAGATATCCAATAGACTTTTCATGGAATAAATGCTCTCATAAATGATTAGATTGTGTGTTAACACTCTTTTTTAGACAGGAATTTTGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGAAAAAGATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGGTATCCCCAATTTGCTTCTTCACGAGGACGAAGTATGAGTTCGAGTTCCATAATGTATGAATTCCTCCGTTATATTCAGTGAGAGAAAGCAAGTTTCCAGAATTCATATCTGGATGTTTATGTGAATTGGAAAATTAGGATTGAAGCTAATTTATTATTTACTAAAAATAGTCCATTTTTATTTTAACTTTTCAGCTGTGTGACATTTTTTAACGGTTGAATTTGATGAAATTAAAAGTTTATGATAAAAATGGATATAACGTGACAAGTTCATCAATTTTTACTTTAAGCTTTTATAAACTTACTAATTTTATATAATATCATATTTTGTAAACTATATATATAATAAAATTTTAGTTTTTATTTTTTAACTAATTTTTTAAAAATTAAATCAAAGGGTAAAAATGGTAATATATATATATATATATTAAAAAAAAAAAACTAATTTTTGATATATTTTAATACTAAATAAAAGCTTGTTGACGTGTTCAAGTGGACCCTACTCTCTCTTATAGGCGCAAATTGGGACTCAAGTTTCCACCGATAAAAAGCCGAAGGCCGCACTCCGAAGACCATAACAGTTCCTATCATCTGGCGCCATCCGGTTGCTTCTCGATCTCCCTGGTAAGAACTCGGAGTTCTCTAGATCCATCCTTCTCTTTGATTTTCGATCTTTTGTCTCTACCTTGTTTATTTTTTAATCTTTGGTGTGTGATTTCGTGCTTTAATTTGGTCTGATTATACGTACGTTGAATGAATGGGTTTTCTTTTGTCTCTTATTTGTTGAAATGGGGATTTGTACTCTTTTCGTTTTGGATTTTCTGGATTTGAATTTGATTTGGGGTATATGCAAGGGCTGGTTTTCTGTGCTTTTTGTTTTTCTTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGTATAGATTTGAGAGACTGCGATGGATGGTGTGGTGTTTAGTTTGATGGAATTTCATGGGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGTAAATAAGCCAAAAGGCAGCAATCCATCTGAGCCCTTTTACTGGAACGGGGAACGTAGTACAGCAGAGGAGGGGAGGATGAGAAATTTAGTCCACAGCTGCAAGAAAGAGGGTAGATTAGTATATTACCAGAGATACATAATAGCATCAATAAAGATAGCTTGATTAAGATGGCCAGCCATCATCCGTTGTTGCTTTTTCTTCATTTCCCATAAGAACCAAAATCAATGAGTTTCTGTGATAGATTACTTTCAAAGATGAGAAGGTGTCTCGTAGATGATGACCCCTTTTGGCTATTTTGTAGTGCATTTGACTTGATGGAAACAGCAACGACTTTTAGGGGATCAATATAACTTGGGAGGAGGTTTGATCTCTAGGGAGGCCACACTTCCTTTTGGGTGTTTGTAACTATTAAATTTTATGGTTATTTCTTCTTATAAACCATTGGAGCCCTTTTTCTGTAAGGCTTTTGCCTTTTGTCTTGGCCTTTGGCTTGGGCTGATTTCTTTTGTGTTGTGTATTGCCCATTTGCATATTCTTTCATTTTCTTCGTTTAATCATTTATGATGATCATAACAATAAATGAAGCCTAGTTTCCTTCACTTCGTTTCCTAAGTAGGGAGGGATGTTATTGCTTTTTAAAGGATGAGAGTCCTCTTTGAACTTGCCCTTGCCCTTGCCCTTGCAAATATTGTGTTCAAGTTTCCTTGTTCTAATAAGTGTTCGCCTTCGATATCTTGGGCAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAGATCTTACACTCTATCATGATATTGTTGAACACATTCACCAGTTTGTTTATCATTTTTTGAAAACCTCTTTGTTTTGCTCTTTGGATTAGAGATGATGACCTGTTTATCTTTTGCATCAGTTTCTACAAATAAGATATGAGAGAGATTTTGGTGGACTTAATAATAAACCTTATTTCATGATTTATTAGTCTTTTGTGCATCATCAGAGCCAAAAGGCTATCCTGGAATTGTGCAATGCAGTGATGTTTATGGAGGGCATAGAGTATTTGTTATGATTTGCTAGACATTTGTGGATCCCTTCCAGCGTTCGACCTTGGTGGAGTGCTTGATTTGGTCAAATGAACATTGGTTGTGAAATCAATCCATATATTTCAATGCATACAATTTCTTTTCCCTATGGAATTATTGCTTAGCTCAGACGGGAGAAAATGTGAACTTTATTTGTGCATTTAGAACCAGAAATGTTAGCTGTTTGTCGAATTCTTCCTTGATTATGAAATGATGAACGATATATGCAGCACTTGTGTGTCGCTTTTGAGTGGTTTGGCTAAGAATCGTGTAACTCGATTGCAATCATGATAACCTAGAACAAAAATTGAAATTTGAATTGTCAAAGTTGTGAGGATTGTTTATTCGATTTT

mRNA sequence

TTTTTCATATATTTTCATATTAAATAAATCCTGCCGCGAACGCTACTCTCTCTCTCTCCCCCAACAGGCTGCTTCAAGTGAAGCTTACTCTCCCAATATTGAACCCTAAACCCTCCCAGATCGCGAAGCGCAAATTTAGACGAGTTTCCACCGGTAGATGGTGGCGGCCGCAATCAGAACACCATAAGCAGTTCCTATCATCTTGTACCATCCGATCGCTTCGATCTTCTTCGGAATTTTGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGAAAAAGATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAGATCTTACACTCTATCATGATATTGTTGAACACATTCACCAGTTTGTTTATCATTTTTTGAAAACCTCTTTGTTTTGCTCTTTGGATTAGAGATGATGACCTGTTTATCTTTTGCATCAGTTTCTACAAATAAGATATGAGAGAGATTTTGGTGGACTTAATAATAAACCTTATTTCATGATTTATTAGTCTTTTGTGCATCATCAGAGCCAAAAGGCTATCCTGGAATTGTGCAATGCAGTGATGTTTATGGAGGGCATAGAGTATTTGTTATGATTTGCTAGACATTTGTGGATCCCTTCCAGCGTTCGACCTTGGTGGAGTGCTTGATTTGGTCAAATGAACATTGGTTGTGAAATCAATCCATATATTTCAATGCATACAATTTCTTTTCCCTATGGAATTATTGCTTAGCTCAGACGGGAGAAAATGTGAACTTTATTTGTGCATTTAGAACCAGAAATGTTAGCTGTTTGTCGAATTCTTCCTTGATTATGAAATGATGAACGATATATGCAGCACTTGTGTGTCGCTTTTGAGTGGTTTGGCTAAGAATCGTGTAACTCGATTGCAATCATGATAACCTAGAACAAAAATTGAAATTTGAATTGTCAAAGTTGTGAGGATTGTTTATTCGATTTT

Coding sequence (CDS)

ATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAG

Protein sequence

MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEKKMAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Homology
[Close]
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match: T112A_ARATH (Multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.7e-41
Identity = 81/124 (65.32%), Postives = 105/124 (84.68%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPETGR+FPVNK    +L  
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match: T112B_ARATH (Multifunctional methyltransferase subunit TRM112-like protein At1g78190 OS=Arabidopsis thaliana GN=At1g78190 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.7e-38
Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+K    +L  
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match: TR112_MOUSE (Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus GN=Trmt112 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.7e-24
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  LV A+ T
Sbjct: 1   MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADT 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVL 117
           +  AE+P+E          FL++ HH LLE+ + EG L CPE+GR FP+++    +L
Sbjct: 61  LNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNML 117

[Close]
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match: TR112_BOVIN (Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus GN=TRMT112 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 50/117 (42.74%), Postives = 78/117 (66.67%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           MRLLTHN+LSS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW  L++A+  
Sbjct: 1   MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADH 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVL 117
           +   ++P+E       + +FL++ HH LLE+ + EG L CPE+GR FP+++    +L
Sbjct: 61  LHLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNML 117

[Close]
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match: TR112_HUMAN (Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens GN=TRMT112 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.0e-21
Identity = 47/122 (38.52%), Postives = 80/122 (65.57%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVN-GFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV + GFPLR++  +V    V+FNP+F+  M  K+EW   ++A+  
Sbjct: 1   MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADN 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLE 120
           +   ++P+       ++ +FL+  HH LLE+ + EG L CPE+GR FP+++    +L  E
Sbjct: 61  LRLIQVPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSE 120

Query: 121 KK 122
           ++
Sbjct: 121 EE 122

[Close]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match: A0A0A0LPH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368930 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.3e-54
Identity = 106/122 (86.89%), Postives = 112/122 (91.80%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNK    +L  E 
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match: A0A067JTJ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00456 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.2e-49
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEKV+EKQVDFNPDFLK+MF KIEWK LVDA+RTM
Sbjct: 1   MRLLTHNMLSSNIKGVSNGFPLRVEVEKVIEKQVDFNPDFLKHMFPKIEWKALVDAARTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           G+AELPE+AESSMLDS +FL++FHHALLELHLEEGAL+CPET RRFPVNK    +L  E 
Sbjct: 61  GFAELPEDAESSMLDSDEFLKKFHHALLELHLEEGALVCPETDRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match: A0A067LB86_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15786 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-48
Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV NGFPLRIEVEKV EK+VDFNPDFL++MF KIEWK LVDA RTM
Sbjct: 1   MRLLTHNMLSSNIKGVTNGFPLRIEVEKVTEKEVDFNPDFLRHMFPKIEWKALVDAGRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GY ELPEE E SMLDS +FL++FHHALLELHLEEGAL+CPETGR+FPVNK    +L LE 
Sbjct: 61  GYNELPEEVELSMLDSDEFLRKFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLLED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match: F6HV21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01740 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-48
Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEK+VEKQVDFN DFLKNMF+KIEWK L DA++TM
Sbjct: 13  MRLLTHNMLSSNIKGVTNGFPLRVEVEKMVEKQVDFNADFLKNMFTKIEWKALFDAAQTM 72

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GY +LP EAESSMLDS +FL++FHHALLELHLEEGALICPETGRRFPVNK    +L  E 
Sbjct: 73  GYTDLPAEAESSMLDSDEFLKKFHHALLELHLEEGALICPETGRRFPVNKGIPNMLLHED 132

Query: 121 KM 123
           ++
Sbjct: 133 EV 134

[Close]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match: A0A059CEH2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01128 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-48
Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPL I VEKV+EK V+ NPDFLKNMF+KIEWK LVDASR+M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLGIVVEKVIEKPVEMNPDFLKNMFAKIEWKALVDASRSM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GY ELPE+A+SSMLDS DFLQRFHHALLELHLEEGAL+CPETGR+FPVNK    +L  E 
Sbjct: 61  GYTELPEQADSSMLDSVDFLQRFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match: AT1G22270.1 (AT1G22270.1 Trm112p-like protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42
Identity = 81/124 (65.32%), Postives = 105/124 (84.68%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPETGR+FPVNK    +L  
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match: AT1G78190.1 (AT1G78190.1 Trm112p-like protein)

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-39
Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+K    +L  
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match: AT5G61310.1 (AT5G61310.1 Cytochrome c oxidase subunit Vc family protein)

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 

Query: 122 MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 181
           MA  ++AH TLKGPSVVKE++ G+ + L AG  WKMH WNEQRK R FYDLLE+GEIGVV
Sbjct: 1   MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 182 VDEE 186
           V EE
Sbjct: 61  VTEE 64

[Close]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match: AT2G47380.1 (AT2G47380.1 Cytochrome c oxidase subunit Vc family protein)

HSP 1 Score: 94.4 bits (233), Expect = 8.1e-20
Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 1 

Query: 122 MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 181
           MA  +VAH TLKGPSVVKE+  G+ + L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 182 VDEE 186
             EE
Sbjct: 61  AAEE 64

[Close]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match: AT5G40382.1 (AT5G40382.1 Cytochrome c oxidase subunit Vc family protein)

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-15
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1 

Query: 126 RVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE 185
           ++     KGPSVVKEI+ G+ +    G  WKMH WN QR+ + FYDLLEKGEI VVV++E
Sbjct: 6   KIGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVEDE 65

[Close]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: gi|659088164|ref|XP_008444834.1| (PREDICTED: TRM112-like protein At1g22270 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-54
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNK    +L  E 
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: gi|449469867|ref|XP_004152640.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 106/122 (86.89%), Postives = 112/122 (91.80%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNK    +L  E 
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: gi|802761569|ref|XP_012089822.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Jatropha curcas])

HSP 1 Score: 202.6 bits (514), Expect = 6.0e-49
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEKV+EKQVDFNPDFLK+MF KIEWK LVDA+RTM
Sbjct: 1   MRLLTHNMLSSNIKGVSNGFPLRVEVEKVIEKQVDFNPDFLKHMFPKIEWKALVDAARTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           G+AELPE+AESSMLDS +FL++FHHALLELHLEEGAL+CPET RRFPVNK    +L  E 
Sbjct: 61  GFAELPEDAESSMLDSDEFLKKFHHALLELHLEEGALVCPETDRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: gi|1009138404|ref|XP_015886569.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Ziziphus jujuba])

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-48
Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNML+SNIKGV NGFPLRIEVEK +EKQVDFNP+FLKNMF+KI WK LVDASR M
Sbjct: 1   MRLLTHNMLASNIKGVTNGFPLRIEVEKAIEKQVDFNPEFLKNMFTKIHWKALVDASRIM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           G+AELPEEA+SSML+S DFL+ FHHALLELHLEEGAL+CPETGRRFPVNK    +L  E 
Sbjct: 61  GFAELPEEADSSMLESDDFLRNFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

[Close]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: gi|802569413|ref|XP_012067870.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Jatropha curcas])

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-48
Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGV NGFPLRIEVEKV EK+VDFNPDFL++MF KIEWK LVDA RTM
Sbjct: 1   MRLLTHNMLSSNIKGVTNGFPLRIEVEKVTEKEVDFNPDFLRHMFPKIEWKALVDAGRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GY ELPEE E SMLDS +FL++FHHALLELHLEEGAL+CPETGR+FPVNK    +L LE 
Sbjct: 61  GYNELPEEVELSMLDSDEFLRKFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLLED 120

Query: 121 KM 123
           ++
Sbjct: 121 EV 122

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g06070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
T112A_ARATH2.7e-4165.32Multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Arabi... [more]
T112B_ARATH4.7e-3862.90Multifunctional methyltransferase subunit TRM112-like protein At1g78190 OS=Arabi... [more]
TR112_MOUSE8.7e-2444.44Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus GN... [more]
TR112_BOVIN1.6e-2242.74Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus GN=T... [more]
TR112_HUMAN9.0e-2138.52Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens GN... [more]
BLAST of Cp4.1LG12g06070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPH5_CUCSA7.3e-5486.89Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368930 PE=4 SV=1[more]
A0A067JTJ8_JATCU4.2e-4979.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00456 PE=4 SV=1[more]
A0A067LB86_JATCU1.6e-4878.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15786 PE=4 SV=1[more]
F6HV21_VITVI3.5e-4878.69Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01740 PE=4 SV=... [more]
A0A059CEH2_EUCGR3.5e-4878.69Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01128 PE=4 SV=1[more]
BLAST of Cp4.1LG12g06070 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22270.11.5e-4265.32 Trm112p-like protein[more]
AT1G78190.12.7e-3962.90 Trm112p-like protein[more]
AT5G61310.17.3e-2168.75 Cytochrome c oxidase subunit Vc family protein[more]
AT2G47380.18.1e-2067.19 Cytochrome c oxidase subunit Vc family protein[more]
AT5G40382.17.8e-1555.00 Cytochrome c oxidase subunit Vc family protein[more]
BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088164|ref|XP_008444834.1|3.6e-5487.70PREDICTED: TRM112-like protein At1g22270 [Cucumis melo][more]
gi|449469867|ref|XP_004152640.1|1.1e-5386.89PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|802761569|ref|XP_012089822.1|6.0e-4979.51PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|1009138404|ref|XP_015886569.1|1.7e-4878.69PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|802569413|ref|XP_012067870.1|2.3e-4878.69PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005746mitochondrial respiratory chain
Vocabulary: INTERPRO
TermDefinition
IPR008432COX5C
IPR005651Trm112-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005746 mitochondrial respiratory chain
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g06070.1Cp4.1LG12g06070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005651Uncharacterised protein family UPF0434/Trm112PFAMPF03966Trm112pcoord: 3..110
score: 2.4
IPR008432Cytochrome c oxidase subunit 5cPRODOMPD019231coord: 123..184
score: 1.0
NoneNo IPR availablePANTHERPTHR12773:SF0TRM112-LIKE PROTEINcoord: 2..110
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g06070CmaCh17G010350Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g06070CmaCh08G004690Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g06070CmoCh17G010110Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g06070Cla015141Watermelon (97103) v1cpewmB131
Cp4.1LG12g06070Csa7G407690Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g06070MELO3C015922Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g06070ClCG09G005070Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g06070CSPI07G18160Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g06070Lsi02G024790Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g06070MELO3C015922.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g06070CsaV3_7G029980Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g06070Bhi09G000676Wax gourdcpewgoB0201
Cp4.1LG12g06070CsGy7G016630Cucumber (Gy14) v2cgybcpeB904
Cp4.1LG12g06070Carg13380Silver-seed gourdcarcpeB0631
Cp4.1LG12g06070Carg07126Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g06070Cp4.1LG17g07490Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g06070Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g06070Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g06070Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g06070Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g06070Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g06070Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g06070Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g06070Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g06070Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g06070Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g06070Watermelon (97103) v1cpewmB139
Cp4.1LG12g06070Watermelon (97103) v1cpewmB141
Cp4.1LG12g06070Melon (DHL92) v3.5.1cpemeB146
Cp4.1LG12g06070Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g06070Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g06070Silver-seed gourdcarcpeB1070
Cp4.1LG12g06070Silver-seed gourdcarcpeB1143
Cp4.1LG12g06070Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g06070Wax gourdcpewgoB0171
Cp4.1LG12g06070Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g06070Cucumber (Gy14) v1cgycpeB0185