Cp4.1LG12g05990 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein trm112, putative
LocationCp4.1LG12 : 7848388 .. 7850605 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTGCTTGACGTGTTCATTGAACTCTATTCTCCAATAGACAAAACCCTAATCTCCCGGGAGCCGCAATTCGAAGAACCCGAACATCTGGCGCCATTCGATCGCTTTGCTTCGATCTCCTCCGGTAAGAACTCTGAGTTCTTCTCTAGATCATCCGTTCTCTTTGATTTTCGATCTTTATCTCTACCCTGTTTTTTTATTTTATATTTTATTTTATTTTTTTTATTTAAATTTATGGTGTTTGATTTCGTGCTTTAATTTCGTCTGATTATATGTATGTTGAATGTGTTCGTTCTCTTTTGTCTCATATTTGTTGGATGTTTTTGGATTTGAATTTGATTTGTAGTAGGTGCAAGGGCTGGTTTTCTGTGCCTTTTGTTTTGATTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGGGTAAGGATTTGAGAGACTGCGATGGATGGTGTGGTGTTTAGTTTGATTGTATTTCTTGGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGTAAATAAGCCGAAAGGCAGCAATCCATCAGAGCCGTTTTACTGGAATGGGGAACATAGAGCAGAGGACGGGAGGATGAGAATAGTATATTAGGAGAGATACATAATAATATGAATAAAAAGATAGCATAAGAACCAAAATCAATGAGTTTCTGTGATACATTACTTCAAAGATGAGGGAGGTGACTCGTAAATGATGGCCCCTTTGTTGAGGATTATTGGGAGTGAGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAATGAGGAATACTATCTACATTGGTATGAGGCCTTTTGGGGAAGCACGAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCGTACCATTGTGGACATATGTGATTCCTAACACCCGCTTATTTTGTAGTGCATTTGACTTGATGGAAACAGAACAACTTTTAGGGGATCAATATAACTTGGGAGGAGGTTTGATCTTTAGGGTTTAGGGTTAATTCTTATTTTGAACCATTGGAGCCCTTTTTCTGTAGAGGCTTTTGCGTTTTGTCTTGGCCTTTGGCTTGGGCTGATTTCTTTTGTGTTGTGTGTTGCCCATTTGCATATTCTTTCATGTTTTGAGCTATAATTTGTTTGATTTACTAGATATTAAAGAGACTTCATAGAAGTTGTTTAGAATATTCTATAATGTGATGCAACTAGTTTTTACAATAATTATTATTTATCATGGAATAGATGTTCTGGTAAATAAATGATTAGATTGTGTGCTAATTTATTTAATAAAAACCTACGCAGCTTCAACAGACAGGAATTTAGAATTGGTAGCCATCATCTTGTGCTAGAGCGCCGCTAACACATTCTGATACCAAATAGCTAACAGAGAGGCGAAAGAGCATAGTAAAAAGATGAGGCTACTTACCCACAACATGCTCTCCTCCAACATCAAGGGTGTTGTCAATGGCTTCCCTCTCCGAATCGAGGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCCGACTTCCTCAAGAACATGTTCTCCAAGATCGAATGGAAGCCCCTCGTCGATGCCTCTTGCGCTATGGGCTATGCTGAGCTTCCCGAGGAGGCCGAGTCGTCGATGCTCGATTCCCATGACTTTCTGCAACGATTCCACCATGCGCTTCTGGAGCTACATCTTGAGGAAGGCGCTCTTATTTGCCCGGAGACTGCCCGTCGATTTCCCGTCAATAAAGGTATCCCCAATTTGCTTCTTCACGAAGACGAGGTCTGAGTTTGAGATTTTATGAATTCCTCTGTTTTCGATTGTTGAATTCGGTGCGAGCAAGCGAGTTTTTAGAATTCATCTCTGGATGTTCTTGTGAATTGGAAAATTAGGGTTTATGCCTTTGGCCAGGCCATGAATGCGACTGAAAATATCTTTGTGACTACAAATTTTTGACGATAAATTAGATGTGGACATTTACCGAAAATATCTAGAATAAACGTGGAAATCTGTCTCTAGTAGGCTTTTTTTTTTTATTTTTTTTTTTTATTTTTTTTTTTATTAACTAAATGTCTTTTAAACTGTGAGGTTGATGGCTTGGCTATATGTAACCGGTCAAAAGTATGAAATATCGGCTAGCAGTGAATTTGAATTCTTTTGAACTCGTTAATGAGATAGACAACACATGAGATCGCTTGCCATGCTCAGAAAGTCAATGAAACTGTT

mRNA sequence

TGCTGCTTGACGTGTTCATTGAACTCTATTCTCCAATAGACAAAACCCTAATCTCCCGGGAGCCGCAATTCGAAGAACCCGAACATCTGGCGCCATTCGATCGCTTTGCTTCGATCTCCTCCGAGAGGCGAAAGAGCATAGTAAAAAGATGAGGCTACTTACCCACAACATGCTCTCCTCCAACATCAAGGGTGTTGTCAATGGCTTCCCTCTCCGAATCGAGGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCCGACTTCCTCAAGAACATGTTCTCCAAGATCGAATGGAAGCCCCTCGTCGATGCCTCTTGCGCTATGGGCTATGCTGAGCTTCCCGAGGAGGCCGAGTCGTCGATGCTCGATTCCCATGACTTTCTGCAACGATTCCACCATGCGCTTCTGGAGCTACATCTTGAGGAAGGCGCTCTTATTTGCCCGGAGACTGCCCGTCGATTTCCCGTCAATAAAGGTATCCCCAATTTGCTTCTTCACGAAGACGAGACAACACATGAGATCGCTTGCCATGCTCAGAAAGTCAATGAAACTGTT

Coding sequence (CDS)

ATGAGGCTACTTACCCACAACATGCTCTCCTCCAACATCAAGGGTGTTGTCAATGGCTTCCCTCTCCGAATCGAGGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCCGACTTCCTCAAGAACATGTTCTCCAAGATCGAATGGAAGCCCCTCGTCGATGCCTCTTGCGCTATGGGCTATGCTGAGCTTCCCGAGGAGGCCGAGTCGTCGATGCTCGATTCCCATGACTTTCTGCAACGATTCCACCATGCGCTTCTGGAGCTACATCTTGAGGAAGGCGCTCTTATTTGCCCGGAGACTGCCCGTCGATTTCCCGTCAATAAAGGTATCCCCAATTTGCTTCTTCACGAAGACGAGACAACACATGAGATCGCTTGCCATGCTCAGAAAGTCAATGAAACTGTT

Protein sequence

MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAMGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHEDETTHEIACHAQKVNETV
Homology
[Close]
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match: T112A_ARATH (Multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.7e-46
Identity = 87/123 (70.73%), Postives = 109/123 (88.62%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ + +M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLH 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPET R+FPVNKGIPN+LLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match: T112B_ARATH (Multifunctional methyltransferase subunit TRM112-like protein At1g78190 OS=Arabidopsis thaliana GN=At1g78190 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.7e-43
Identity = 84/123 (68.29%), Postives = 104/123 (84.55%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD + +M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLH 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPET R+F V+KGIPN+LLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match: TR112_MOUSE (Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus GN=Trmt112 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-28
Identity = 57/123 (46.34%), Postives = 85/123 (69.11%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCA 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  LV A+  
Sbjct: 1   MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADT 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHE 120
           +  AE+P+E          FL++ HH LLE+ + EG L CPE+ R FP+++GIPN+LL++
Sbjct: 61  LNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLND 120

Query: 121 DET 123
           +ET
Sbjct: 121 EET 123

[Close]
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match: TR112_BOVIN (Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus GN=TRMT112 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27
Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCA 60
           MRLLTHN+LSS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW  L++A+  
Sbjct: 1   MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADH 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHE 120
           +   ++P+E       + +FL++ HH LLE+ + EG L CPE+ R FP+++GIPN+LL +
Sbjct: 61  LHLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSD 120

Query: 121 DET 123
           +ET
Sbjct: 121 EET 123

[Close]
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match: TR112_HUMAN (Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens GN=TRMT112 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-25
Identity = 53/123 (43.09%), Postives = 85/123 (69.11%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVN-GFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCA 60
           M+LLTHN+LSS+++GV + GFPLR++  +V    V+FNP+F+  M  K+EW   ++A+  
Sbjct: 1   MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADN 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHE 120
           +   ++P+       ++ +FL+  HH LLE+ + EG L CPE+ R FP+++GIPN+LL E
Sbjct: 61  LRLIQVPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSE 120

Query: 121 DET 123
           +ET
Sbjct: 121 EET 123

[Close]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match: A0A0A0LPH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368930 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.6e-59
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDAS  M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match: A0A067JTJ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00456 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.2e-54
Identity = 103/121 (85.12%), Postives = 114/121 (94.21%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEKV+EKQVDFNPDFLK+MF KIEWK LVDA+  M
Sbjct: 1   MRLLTHNMLSSNIKGVSNGFPLRVEVEKVIEKQVDFNPDFLKHMFPKIEWKALVDAARTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           G+AELPE+AESSMLDS +FL++FHHALLELHLEEGAL+CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GFAELPEDAESSMLDSDEFLKKFHHALLELHLEEGALVCPETDRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match: A0A059CEH2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01128 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.5e-53
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV+NGFPL I VEKV+EK V+ NPDFLKNMF+KIEWK LVDAS +M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLGIVVEKVIEKPVEMNPDFLKNMFAKIEWKALVDASRSM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GY ELPE+A+SSMLDS DFLQRFHHALLELHLEEGAL+CPET R+FPVNKGIPN+LLHED
Sbjct: 61  GYTELPEQADSSMLDSVDFLQRFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match: F6HV21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01740 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.6e-53
Identity = 102/121 (84.30%), Postives = 111/121 (91.74%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEK+VEKQVDFN DFLKNMF+KIEWK L DA+  M
Sbjct: 13  MRLLTHNMLSSNIKGVTNGFPLRVEVEKMVEKQVDFNADFLKNMFTKIEWKALFDAAQTM 72

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GY +LP EAESSMLDS +FL++FHHALLELHLEEGALICPET RRFPVNKGIPN+LLHED
Sbjct: 73  GYTDLPAEAESSMLDSDEFLKKFHHALLELHLEEGALICPETGRRFPVNKGIPNMLLHED 132

Query: 121 E 122
           E
Sbjct: 133 E 133

[Close]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match: V4V5H5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003351mg PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-52
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV NGFPL IEVEKV+EKQVDFNPDFLKN+F KIEW+ LV AS +M
Sbjct: 1   MRLLTHNMLSSNIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSM 60

Query: 61  GYAELPEEA-ESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHE 120
           GYAELPEE+ ESSMLDS DFL++FHHALLELHLEEGAL+CPET R+FPVNKGIPN+LLHE
Sbjct: 61  GYAELPEESPESSMLDSDDFLRKFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHE 120

Query: 121 DE 122
           DE
Sbjct: 121 DE 122

[Close]
BLAST of Cp4.1LG12g05990 vs. TAIR10
Match: AT1G22270.1 (AT1G22270.1 Trm112p-like protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-47
Identity = 87/123 (70.73%), Postives = 109/123 (88.62%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ + +M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLH 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPET R+FPVNKGIPN+LLH
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]
BLAST of Cp4.1LG12g05990 vs. TAIR10
Match: AT1G78190.1 (AT1G78190.1 Trm112p-like protein)

HSP 1 Score: 175.3 bits (443), Expect = 2.7e-44
Identity = 84/123 (68.29%), Postives = 104/123 (84.55%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD + +M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLH 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPET R+F V+KGIPN+LLH
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EDE 122
           EDE
Sbjct: 121 EDE 123

[Close]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match: gi|659088164|ref|XP_008444834.1| (PREDICTED: TRM112-like protein At1g22270 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDAS  M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALICPETNRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match: gi|449469867|ref|XP_004152640.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV+NGFPLRIEVEKVVEK VDFNPDFLKNMFSKIEWKPLVDAS  M
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GYAELPEEA++SMLDSHDFLQRFHHALLELHLEEGAL CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GYAELPEEADASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match: gi|802761569|ref|XP_012089822.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Jatropha curcas])

HSP 1 Score: 218.8 bits (556), Expect = 6.0e-54
Identity = 103/121 (85.12%), Postives = 114/121 (94.21%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV NGFPLR+EVEKV+EKQVDFNPDFLK+MF KIEWK LVDA+  M
Sbjct: 1   MRLLTHNMLSSNIKGVSNGFPLRVEVEKVIEKQVDFNPDFLKHMFPKIEWKALVDAARTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           G+AELPE+AESSMLDS +FL++FHHALLELHLEEGAL+CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GFAELPEDAESSMLDSDEFLKKFHHALLELHLEEGALVCPETDRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match: gi|1009138404|ref|XP_015886569.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Ziziphus jujuba])

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-53
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNML+SNIKGV NGFPLRIEVEK +EKQVDFNP+FLKNMF+KI WK LVDAS  M
Sbjct: 1   MRLLTHNMLASNIKGVTNGFPLRIEVEKAIEKQVDFNPEFLKNMFTKIHWKALVDASRIM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           G+AELPEEA+SSML+S DFL+ FHHALLELHLEEGAL+CPET RRFPVNKGIPN+LLHED
Sbjct: 61  GFAELPEEADSSMLESDDFLRNFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

[Close]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match: gi|657997403|ref|XP_008391084.1| (PREDICTED: TRM112-like protein At1g22270 [Malus domestica])

HSP 1 Score: 215.7 bits (548), Expect = 5.1e-53
Identity = 102/121 (84.30%), Postives = 110/121 (90.91%), Query Frame = 1 

Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASCAM 60
           MRLLTHNMLSSNIKGV NGFPLRIE+EKVVEKQV+FNPDFLKNMF KIEWK LV+AS +M
Sbjct: 1   MRLLTHNMLSSNIKGVTNGFPLRIEIEKVVEKQVEFNPDFLKNMFPKIEWKALVNASHSM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120
           GY ELPEE E S LDS DFL +FHHALLELHLEEGAL+CPET RRFPV+KGIPN+LLHED
Sbjct: 61  GYVELPEEVEPSRLDSEDFLHKFHHALLELHLEEGALVCPETGRRFPVSKGIPNMLLHED 120

Query: 121 E 122
           E
Sbjct: 121 E 121

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
T112A_ARATH2.7e-4670.73Multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Arabi... [more]
T112B_ARATH4.7e-4368.29Multifunctional methyltransferase subunit TRM112-like protein At1g78190 OS=Arabi... [more]
TR112_MOUSE7.3e-2846.34Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus GN... [more]
TR112_BOVIN6.2e-2745.53Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus GN=T... [more]
TR112_HUMAN4.5e-2543.09Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens GN... [more]
BLAST of Cp4.1LG12g05990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPH5_CUCSA9.6e-5992.56Uncharacterized protein OS=Cucumis sativus GN=Csa_2G368930 PE=4 SV=1[more]
A0A067JTJ8_JATCU4.2e-5485.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00456 PE=4 SV=1[more]
A0A059CEH2_EUCGR3.5e-5384.30Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01128 PE=4 SV=1[more]
F6HV21_VITVI4.6e-5384.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01740 PE=4 SV=... [more]
V4V5H5_9ROSI1.7e-5284.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003351mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g05990 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22270.11.5e-4770.73 Trm112p-like protein[more]
AT1G78190.12.7e-4468.29 Trm112p-like protein[more]
BLAST of Cp4.1LG12g05990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088164|ref|XP_008444834.1|4.7e-5993.39PREDICTED: TRM112-like protein At1g22270 [Cucumis melo][more]
gi|449469867|ref|XP_004152640.1|1.4e-5892.56PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|802761569|ref|XP_012089822.1|6.0e-5485.12PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|1009138404|ref|XP_015886569.1|1.7e-5384.30PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g222... [more]
gi|657997403|ref|XP_008391084.1|5.1e-5384.30PREDICTED: TRM112-like protein At1g22270 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005651Trm112-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0005977 glycogen metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0019156 isoamylase activity
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05990.1Cp4.1LG12g05990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005651Uncharacterised protein family UPF0434/Trm112PFAMPF03966Trm112pcoord: 3..111
score: 1.9
NoneNo IPR availableGENE3DG3DSA:2.20.25.10coord: 87..120
score: 3.
NoneNo IPR availableunknownSSF158997Trm112p-likecoord: 87..123
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05990CmaCh17G010570Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05990CmoCh17G010290Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05990Carg07146Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05990Cucumber (Gy14) v2cgybcpeB904
Cp4.1LG12g05990Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05990Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05990Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g05990Silver-seed gourdcarcpeB0801
Cp4.1LG12g05990Silver-seed gourdcarcpeB1070
Cp4.1LG12g05990Silver-seed gourdcarcpeB1143
Cp4.1LG12g05990Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g05990Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05990Wax gourdcpewgoB0171
Cp4.1LG12g05990Wax gourdcpewgoB0210
Cp4.1LG12g05990Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g05990Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g05990Cucumber (Gy14) v1cgycpeB0185
Cp4.1LG12g05990Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g05990Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05990Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g05990Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05990Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05990Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g05990Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05990Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g05990Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05990Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g05990Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05990Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05990Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g05990Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05990Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g05990Watermelon (97103) v1cpewmB131
Cp4.1LG12g05990Watermelon (97103) v1cpewmB141
Cp4.1LG12g05990Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05990Melon (DHL92) v3.5.1cpemeB146