Cp4.1LG12g05920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGATA transcription factor 23-like protein
LocationCp4.1LG12 : 7842449 .. 7843834 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCGAGGCTCGTACATAATTATGAAGAAAAATAGTCTCCCCTAACCCAGAAATGGACGTGGGATTCGATACAGGAAGATGAAGAATAACAATGGGGGAGTGAATAAGGGCGAAAAGTGGAAGAAAAAATAGGAGCCAGAATCGGTGAAGGTTCTAGGCACATCTACAACCACGCGACAAGACACAAAAATAATAATTAAAAAAATATGGAATAACCCAGAACTTACCACTCCAAGTACACGTGGACGCTGTGCTGTCCACGCCACGTACTCCACCCGCCACGTGCCATTTCCTCTTCCCATCTCTAGAAACTCCGCCTCTTTCCTTTTTAACCTCGCCGCAAACCGGAATTCGGAAGTCATAAACCATGACATCCAGATTGACGGCGATCGCATCGAAACGGAATTGGTCCTTCTCTCTGGCCCAGTTCCAACGTCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCCGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGGTATTTCTTCTTTCTCTTATCATATAATGATCTACAAGCGCTTTTCATGGAAGCAATATTTTGAACTTTTGTTCTGTTTTTGTAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAAGCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCATTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAGGAAGAAGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTGGACACGCGGAAGCCGATCACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATGTGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCGAAGAGCGAAGGAGATTTGGAAACAAAATGCGATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGGGCTCTGCGTGGTGAACAGTTTTAAATAGTGTTGTAATTTTAATAAAACTTAAAATCCGATGTGGGAGAAGGGAGGTCGGTTGATTTATACCCTGCGTCTTTCACCCGACTCGTATTCTAATCCGATGTGGGAGAACCAAGATGAATCGCGCACGATTGTTGGCACGTGCGAATAGGGTTAAAATAATGGTCAATTTTTGGCACGTCTTTTGATGATGGATGGTTCCGTAGAAGCTAAA

mRNA sequence

ATGAGTCGAGGCTCGTACATAATTATGAAGAAAAATAGTCTCCCCTAACCCAGAAATGGACGTGGGATTCGATACAGGAAGATGAAGAATAACAATGGGGGAGTGAATAAGGGCGAAAAGTGGAAGAAAAAATAGGAGCCAGAATCGGTGAAGGTTCTAGGCACATCTACAACCACGCGACAAGACACAAAAATAATAATTAAAAAAATATGGAATAACCCAGAACTTACCACTCCAAGTACACGTGGACGCTGTGCTGTCCACGCCACGTACTCCACCCGCCACGTGCCATTTCCTCTTCCCATCTCTAGAAACTCCGCCTCTTTCCTTTTTAACCTCGCCGCAAACCGGAATTCGGAAGTCATAAACCATGACATCCAGATTGACGGCGATCGCATCGAAACGGAATTGGTCCTTCTCTCTGGCCCAGTTCCAACGTCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCCGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAAGCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCATTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAGGAAGAAGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTGGACACGCGGAAGCCGATCACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATGTGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCGAAGAGCGAAGGAGATTTGGAAACAAAATGCGATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGGGCTCTGCGTGGTGAACAGTTTTAAATAGTGTTGTAATTTTAATAAAACTTAAAATCCGATGTGGGAGAAGGGAGGTCGGTTGATTTATACCCTGCGTCTTTCACCCGACTCGTATTCTAATCCGATGTGGGAGAACCAAGATGAATCGCGCACGATTGTTGGCACGTGCGAATAGGGTTAAAATAATGGTCAATTTTTGGCACGTCTTTTGATGATGGATGGTTCCGTAGAAGCTAAA

Coding sequence (CDS)

ATGACATCCAGATTGACGGCGATCGCATCGAAACGGAATTGGTCCTTCTCTCTGGCCCAGTTCCAACGTCTCAGGCGATGTGGTTTGACGACATGTCGTACCGCTGACCCTTCCGTTCATGCCAACGACGACAACCACCCCGCCGTTCCATCCGGTGAACCAGAGCAATCACAGGATAATTTAGAGCCAGACAGTGCGAAAGCCAATTACGAAAGAGACGATTCCAAACAGGGAGATTCAAATGGGCCGTTTGCGCCACCGAAGGCTCAATACGCCTCCTCCCCTCGCTTAGAAACCACGCCGGTCGCCCAGGCCTCGAAGCCTATCACTCAACAAAAAAGAGCTCACAGTACGGTACTAGCCGACGTCAGCTGCATCGGCTTCGACGGCGGGCCATTTCCCGCTGAGGAAAAAAACAGAGAAAAAGACCGTAAAGAACAGGAAGAAGACGAAAGAGAATACTACAAGCACCACAAGGCATCGCCGTTAGCCGAGATCGAGTTTGTGGACACGCGGAAGCCGATCACTAGAGCGACGGACGGGACGGCGTACGACGGCGGCGGTAAGGATGTGATAGGGTGGTTACCGGAGCAGGAGGATACAGTGGATGATTCTCTTCGAAGAGCGAAGGAGATTTGGAAACAAAATGCGATGCGCGGGGATCCCGATGCTCCGCAGTCGAGAGTTCTTAGGGCTCTGCGTGGTGAACAGTTTTAA

Protein sequence

MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTCRTADPSVHANDDNHPAVPSGEPEQSQDNLEPDSAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKPITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALRGEQF
Homology
[Close]
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match: A0A0A0K9G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405970 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89
Identity = 185/244 (75.82%), Postives = 199/244 (81.56%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLT--TCRTADPSVHANDD---NHPAVPSGEPE 60
           M S L AIA K NW+F + QFQ LRR GLT  T RTADPS+HANDD   N PAV SGEPE
Sbjct: 31  MQSTLRAIAPKSNWAFWVTQFQSLRRGGLTLTTSRTADPSLHANDDDDDNDPAVLSGEPE 90

Query: 61  QSQDNLEPDSAKANYER-DDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKR 120
           +SQDNLEPD+AKANY+R DD KQGDS GPF  P AQ+ASSPRLETT V QASKPITQQKR
Sbjct: 91  RSQDNLEPDNAKANYDRRDDPKQGDSKGPFGKPTAQHASSPRLETTVVGQASKPITQQKR 150

Query: 121 AHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKP 180
           AHS  + DVSCIG  GGP    ++NR  + KE+EED R+YYKHHKASPLAEIEF DTRKP
Sbjct: 151 AHS--IDDVSCIGVYGGPLEQGKENRTTEMKEEEEDNRDYYKHHKASPLAEIEFADTRKP 210

Query: 181 ITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALR 239
           ITRATDGTAYDG    VIGWLPEQ DTVDDSLRRA EIWKQNAMRGDPDAPQSRVLRALR
Sbjct: 211 ITRATDGTAYDGESGTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALR 270

[Close]
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match: A0A059AY79_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01072 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.8e-52
Identity = 131/252 (51.98%), Postives = 170/252 (67.46%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTC---RTADPSVHAND---DNHPAVPSGEP 60
           M SRL AIA     + +  + +   R GL +    RTADP VHA +   +  PAV SGEP
Sbjct: 1   MRSRLVAIAGSSYRAATGYRRREAARRGLASVSAGRTADPDVHAKERESEVKPAVFSGEP 60

Query: 61  EQSQDNLEPD---SAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQ 120
           E+++   EPD   + K + E +  K    + PFAPP+  +++SPRL++TPV    +P  Q
Sbjct: 61  EETRKVYEPDPKPAMKRDVEPEHPKARGDSEPFAPPRPPHSTSPRLQSTPVNNPVEPNYQ 120

Query: 121 QKR--AHSTVLADVSCIGFDGGPFP-AEEKNREK-DRKEQEEDEREYYKHHKASPLAEIE 180
           QKR  A +T L +VSC G DG P+P  +E+NR + +R E +ED+REY+ HHKASPL+EI+
Sbjct: 121 QKRNKAPATPLENVSCAGLDGSPWPEGDEQNRSRGNRGEADEDDREYFAHHKASPLSEIK 180

Query: 181 FVDTRKPITRATDGTAYD---GGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDA 237
           F DTRKPITRATDGTA     GG  DV+GW PEQ DT +++L RA  IWK++AMRGDPDA
Sbjct: 181 FADTRKPITRATDGTADSASYGGAPDVVGWRPEQLDTAEEALMRAARIWKESAMRGDPDA 240

[Close]
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match: B9RNI8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348200 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.5e-48
Identity = 123/247 (49.80%), Postives = 164/247 (66.40%), Query Frame = 1 

Query: 3   SRLTAIASKRNWSFSLA---QFQRLRRCGLTTCRTADPSVHANDDNH---PAVPSGEPEQ 62
           SRL A A++      LA   Q  + R   + T RT DP+V++ + N    PAV SG+PE+
Sbjct: 4   SRLAAAATRFYRLLYLARHNQAAQRRFAAVATGRTGDPAVYSEERNRELKPAVYSGDPEE 63

Query: 63  SQDNLEPDSAKANYERD---DSKQGDSNGPFA--PPKAQYASSPRLETTPVAQASKPITQ 122
           +++  EP+SAK + E +   + +   S G  A  PP+  +ASSPRL +  V    +P  Q
Sbjct: 64  TENKYEPESAKRDVESEAETEYRTTSSKGTEALTPPRPPHASSPRLVSIGVNNPVEPHIQ 123

Query: 123 QKRAHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDT 182
           QKR +ST L + SC G DG P+P   K +EK  +E++EDE EYY+HHKASPL+EIE  DT
Sbjct: 124 QKRENST-LEETSCAGLDGTPWP---KQKEKG-EEEDEDENEYYRHHKASPLSEIEIADT 183

Query: 183 RKPITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLR 239
           RKPITRATDG+A  G G+DVIGWLPEQ +T ++++ RA+ IW +NA RGDPD+PQ RVLR
Sbjct: 184 RKPITRATDGSADAGKGRDVIGWLPEQLETAEETMERARRIWTENATRGDPDSPQGRVLR 243

[Close]
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match: A0A067K8W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13990 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.5e-48
Identity = 118/245 (48.16%), Postives = 154/245 (62.86%), Query Frame = 1 

Query: 3   SRLTAIASKRNWSFSLAQFQRLRR--CGLTTCRTADPSVHANDDNH---PAVPSGEPEQS 62
           SRL   A++      LAQ Q  +R     +T R ADP + + + +    P VPSGEPE++
Sbjct: 4   SRLATTATRLYRILFLAQNQARQRGFAASSTGRVADPDIFSTERDRELKPTVPSGEPEET 63

Query: 63  QDNLEPDSAKANYERD---DSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKR 122
           +D+ EP++AK   E +   + +      P A  K  YASSPRLE+  V     P  QQKR
Sbjct: 64  RDHYEPETAKRGTEAEAETEHRTSKETEPLAQSKLPYASSPRLESIGVNHPLDPYVQQKR 123

Query: 123 AHSTVLAD-VSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRK 182
            +STV A+ +SC G DG P P +++       + EEDE EYY+HHKASPL+EI+  DTR 
Sbjct: 124 ENSTVTAEEISCAGLDGTPLPEDKET------QGEEDENEYYRHHKASPLSEIKMADTRT 183

Query: 183 PITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRAL 239
           PI RATD TA  G G+DVIGWLPEQ DT +++L RA+ IW +NAMRGDPD+P  R+LR L
Sbjct: 184 PIRRATDSTADAGLGRDVIGWLPEQLDTAEEALERARRIWMENAMRGDPDSPHGRILREL 242

[Close]
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match: D7U2F0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01080 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.8e-47
Identity = 125/240 (52.08%), Postives = 155/240 (64.58%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRR---CGLTTCRTADPSVHANDDNHPAVPSGEPEQS 60
           M SRL A A+     FSLA+ + + R       + RTADP ++  +   P +   +    
Sbjct: 1   MQSRLAAKATTSYRVFSLARNRAMPRGPASAPNSGRTADPEIYTAN---PGIKE-DLVHP 60

Query: 61  QDNLEPDSAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHS 120
           +DN + D ++   E  D K      PF PPK  YA+SPRLETT V +   PITQQKR+ S
Sbjct: 61  RDNDKIDDSQQRTE--DVKPSKETVPFVPPKPPYAASPRLETTGVNRPLDPITQQKRSIS 120

Query: 121 TVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKPITR 180
           T   D  C G DG P P  E+  ++ R+ +EED R YY HHKASPL+EIE VDTRKPITR
Sbjct: 121 T---DAICAGVDGTPLPNNEEGEQRRREVEEEDYRAYYSHHKASPLSEIEVVDTRKPITR 180

Query: 181 ATDGTAYD-GGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALRGE 237
           ATDGT  D  G K VIGWLPEQ DT +++L+RA EIWKQ+AMRGDPD+PQSRVLRALRG+
Sbjct: 181 ATDGTYGDHEGDKVVIGWLPEQLDTAEEALQRANEIWKQSAMRGDPDSPQSRVLRALRGD 231

[Close]
BLAST of Cp4.1LG12g05920 vs. TAIR10
Match: AT1G02700.1 (AT1G02700.1 unknown protein)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 120/246 (48.78%), Postives = 152/246 (61.79%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTCRTADPSVHA-NDDNHPAVPSGEPEQSQD 60
           M SRL A AS           +RL     T+ RTADP +HA ND   PA+   +PE   D
Sbjct: 3   MQSRLLAFASAARSRVRPIAQRRLAFGSSTSGRTADPEIHAGNDGADPAIYPRDPEGMDD 62

Query: 61  NLEPDSAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTV 120
              P +A      D  +      P  PPK+  A++ +LE+TPV   S+P  QQKR +ST 
Sbjct: 63  VANPKTAAEEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHFQQKRKNSTA 122

Query: 121 ----LADVSCIGFDGGPFPAEEKNREKDRKEQEEDE--REYYKHHKASPLAEIEFVDTRK 180
               L  VSC G DG P+P +E   E+ R+ ++E E  +E+YKHHKASPL+EIEF DTRK
Sbjct: 123 SPPSLDSVSCAGLDGSPWPRDEGEVEEQRRREDETESDQEFYKHHKASPLSEIEFADTRK 182

Query: 181 PITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDA-PQSRVLRA 239
           PIT+ATDGTAY   GKDVIGWLPEQ DT ++SL +A  I+K+NA RGDP+  P SR+LR 
Sbjct: 183 PITQATDGTAYP-AGKDVIGWLPEQLDTAEESLMKATMIFKRNAERGDPETFPHSRILRE 242

[Close]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match: gi|659101266|ref|XP_008451516.1| (PREDICTED: uncharacterized protein LOC103492778 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 3.1e-90
Identity = 188/250 (75.20%), Postives = 203/250 (81.20%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTCRTADPSVHANDD--NHPAVPSGEPEQSQ 60
           M SRL AIA + NW+  + QFQ LRR GLTT RTADPSVHANDD  N P+V SGEPE+SQ
Sbjct: 1   MQSRLRAIAPRSNWALWVTQFQGLRRGGLTTGRTADPSVHANDDDENDPSVLSGEPERSQ 60

Query: 61  DNLEPDSAKANYE-RDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHS 120
           DNLEPD+AKANYE RDD KQGDSNGPF P KAQ+ASSPRLETT V QASKPITQQKRAHS
Sbjct: 61  DNLEPDNAKANYEGRDDPKQGDSNGPFGPSKAQHASSPRLETTVVGQASKPITQQKRAHS 120

Query: 121 TVLADVSCIGFDGGPFPAEEKNRE---KDRKEQEE------DEREYYKHHKASPLAEIEF 180
             + DVSCIG  GGP    +++R    KD++E+EE      D R+YYKHHKASPLAEIEF
Sbjct: 121 VAIDDVSCIGVYGGPLEEGKESRTTEMKDKEEEEEEIEEIEDNRDYYKHHKASPLAEIEF 180

Query: 181 VDTRKPITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSR 239
           VDTRKPITRATDGTA  G GK VIGWLPEQ DTVDDSLRRA EIWKQNAMRGDPDAPQSR
Sbjct: 181 VDTRKPITRATDGTADYGDGKTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSR 240

[Close]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match: gi|778728177|ref|XP_011659381.1| (PREDICTED: uncharacterized protein LOC105436175 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 185/244 (75.82%), Postives = 199/244 (81.56%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLT--TCRTADPSVHANDD---NHPAVPSGEPE 60
           M S L AIA K NW+F + QFQ LRR GLT  T RTADPS+HANDD   N PAV SGEPE
Sbjct: 1   MQSTLRAIAPKSNWAFWVTQFQSLRRGGLTLTTSRTADPSLHANDDDDDNDPAVLSGEPE 60

Query: 61  QSQDNLEPDSAKANYER-DDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKR 120
           +SQDNLEPD+AKANY+R DD KQGDS GPF  P AQ+ASSPRLETT V QASKPITQQKR
Sbjct: 61  RSQDNLEPDNAKANYDRRDDPKQGDSKGPFGKPTAQHASSPRLETTVVGQASKPITQQKR 120

Query: 121 AHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKP 180
           AHS  + DVSCIG  GGP    ++NR  + KE+EED R+YYKHHKASPLAEIEF DTRKP
Sbjct: 121 AHS--IDDVSCIGVYGGPLEQGKENRTTEMKEEEEDNRDYYKHHKASPLAEIEFADTRKP 180

Query: 181 ITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALR 239
           ITRATDGTAYDG    VIGWLPEQ DTVDDSLRRA EIWKQNAMRGDPDAPQSRVLRALR
Sbjct: 181 ITRATDGTAYDGESGTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALR 240

[Close]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match: gi|700189759|gb|KGN44992.1| (hypothetical protein Csa_7G405970 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 185/244 (75.82%), Postives = 199/244 (81.56%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLT--TCRTADPSVHANDD---NHPAVPSGEPE 60
           M S L AIA K NW+F + QFQ LRR GLT  T RTADPS+HANDD   N PAV SGEPE
Sbjct: 31  MQSTLRAIAPKSNWAFWVTQFQSLRRGGLTLTTSRTADPSLHANDDDDDNDPAVLSGEPE 90

Query: 61  QSQDNLEPDSAKANYER-DDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKR 120
           +SQDNLEPD+AKANY+R DD KQGDS GPF  P AQ+ASSPRLETT V QASKPITQQKR
Sbjct: 91  RSQDNLEPDNAKANYDRRDDPKQGDSKGPFGKPTAQHASSPRLETTVVGQASKPITQQKR 150

Query: 121 AHSTVLADVSCIGFDGGPFPAEEKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKP 180
           AHS  + DVSCIG  GGP    ++NR  + KE+EED R+YYKHHKASPLAEIEF DTRKP
Sbjct: 151 AHS--IDDVSCIGVYGGPLEQGKENRTTEMKEEEEDNRDYYKHHKASPLAEIEFADTRKP 210

Query: 181 ITRATDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALR 239
           ITRATDGTAYDG    VIGWLPEQ DTVDDSLRRA EIWKQNAMRGDPDAPQSRVLRALR
Sbjct: 211 ITRATDGTAYDGESGTVIGWLPEQVDTVDDSLRRATEIWKQNAMRGDPDAPQSRVLRALR 270

[Close]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match: gi|702435439|ref|XP_010069876.1| (PREDICTED: uncharacterized protein LOC104456721 [Eucalyptus grandis])

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 131/252 (51.98%), Postives = 170/252 (67.46%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTC---RTADPSVHAND---DNHPAVPSGEP 60
           M SRL AIA     + +  + +   R GL +    RTADP VHA +   +  PAV SGEP
Sbjct: 1   MRSRLVAIAGSSYRAATGYRRREAARRGLASVSAGRTADPDVHAKERESEVKPAVFSGEP 60

Query: 61  EQSQDNLEPD---SAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQ 120
           E+++   EPD   + K + E +  K    + PFAPP+  +++SPRL++TPV    +P  Q
Sbjct: 61  EETRKVYEPDPKPAMKRDVEPEHPKARGDSEPFAPPRPPHSTSPRLQSTPVNNPVEPNYQ 120

Query: 121 QKR--AHSTVLADVSCIGFDGGPFP-AEEKNREK-DRKEQEEDEREYYKHHKASPLAEIE 180
           QKR  A +T L +VSC G DG P+P  +E+NR + +R E +ED+REY+ HHKASPL+EI+
Sbjct: 121 QKRNKAPATPLENVSCAGLDGSPWPEGDEQNRSRGNRGEADEDDREYFAHHKASPLSEIK 180

Query: 181 FVDTRKPITRATDGTAYD---GGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDA 237
           F DTRKPITRATDGTA     GG  DV+GW PEQ DT +++L RA  IWK++AMRGDPDA
Sbjct: 181 FADTRKPITRATDGTADSASYGGAPDVVGWRPEQLDTAEEALMRAARIWKESAMRGDPDA 240

[Close]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match: gi|1009148402|ref|XP_015891918.1| (PREDICTED: uncharacterized protein LOC107426299 [Ziziphus jujuba])

HSP 1 Score: 207.2 bits (526), Expect = 3.1e-50
Identity = 119/236 (50.42%), Postives = 153/236 (64.83%), Query Frame = 1 

Query: 1   MTSRLTAIASKRNWSFSLAQFQRLRRCGLTTCRTADPSVHAND-DNHPAVPSGEPEQSQD 60
           M SRL A A +       +Q  R         RTADPSVHA D  + P + SG+PE++Q+
Sbjct: 1   MQSRLVATARRSTCWVIPSQSFRRALASAANKRTADPSVHAKDYGDDPVILSGDPEETQN 60

Query: 61  NLEPDSAKANYERDDSKQGDSNGPFAPPKAQYASSPRLETTPVAQASKPITQQKRAHSTV 120
             EP  AK     ++    +   P APPK  Y SSPRLE++ V Q   P  QQ+R+HST 
Sbjct: 61  VAEPKPAKKQTHTEEHWPSNGTDPLAPPKPPYPSSPRLESSGVNQPLDPAHQQERSHSTA 120

Query: 121 LADVSCIGFDGGPFPAE-EKNREKDRKEQEEDEREYYKHHKASPLAEIEFVDTRKPITRA 180
           L  VSC+G DG P P + E+ +E+D   ++ ++++Y++HHKASPL+EIE  DTRKPITRA
Sbjct: 121 LEGVSCVGLDGTPLPNDKEEEKERDEGAEQGNDKDYFEHHKASPLSEIEMADTRKPITRA 180

Query: 181 TDGTAYDGGGKDVIGWLPEQEDTVDDSLRRAKEIWKQNAMRGDPDAPQSRVLRALR 235
           TDGTA    GKDVIGW PEQ DT D++L+R   I+ +NAMRGDP AP SRVLRALR
Sbjct: 181 TDGTADYVLGKDVIGWRPEQLDTADEALKRGTRIFMENAMRGDPTAPHSRVLRALR 236

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g05920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9G7_CUCSA1.1e-8975.82Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405970 PE=4 SV=1[more]
A0A059AY79_EUCGR8.8e-5251.98Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01072 PE=4 SV=1[more]
B9RNI8_RICCO3.5e-4849.80Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348200 PE=4 SV=1[more]
A0A067K8W4_JATCU4.5e-4848.16Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13990 PE=4 SV=1[more]
D7U2F0_VITVI3.8e-4752.08Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01080 PE=4 SV=... [more]
BLAST of Cp4.1LG12g05920 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02700.13.7e-4948.78 unknown protein[more]
BLAST of Cp4.1LG12g05920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101266|ref|XP_008451516.1|3.1e-9075.20PREDICTED: uncharacterized protein LOC103492778 [Cucumis melo][more]
gi|778728177|ref|XP_011659381.1|1.5e-8975.82PREDICTED: uncharacterized protein LOC105436175 [Cucumis sativus][more]
gi|700189759|gb|KGN44992.1|1.5e-8975.82hypothetical protein Csa_7G405970 [Cucumis sativus][more]
gi|702435439|ref|XP_010069876.1|1.3e-5151.98PREDICTED: uncharacterized protein LOC104456721 [Eucalyptus grandis][more]
gi|1009148402|ref|XP_015891918.1|3.1e-5050.42PREDICTED: uncharacterized protein LOC107426299 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0016114 terpenoid biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05920.1Cp4.1LG12g05920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35985FAMILY NOT NAMEDcoord: 2..238
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05920Cucsa.205240Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g05920CmaCh17G010530Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05920CmoCh17G010260Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05920Cla015117Watermelon (97103) v1cpewmB131
Cp4.1LG12g05920Csa7G405970Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05920MELO3C015946Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05920ClCG09G005330Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05920CSPI07G17930Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05920Lsi02G024490Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05920MELO3C015946.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05920CsaV3_7G029750Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05920Bhi09G000783Wax gourdcpewgoB0210
Cp4.1LG12g05920CsGy7G016390Cucumber (Gy14) v2cgybcpeB906
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05920Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g05920Wax gourdcpewgoB0171
Cp4.1LG12g05920Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g05920Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g05920Cucumber (Gy14) v1cgycpeB0185
Cp4.1LG12g05920Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05920Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g05920Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05920Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05920Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g05920Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05920Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g05920Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g05920Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g05920Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g05920Watermelon (97103) v1cpewmB141
Cp4.1LG12g05920Melon (DHL92) v3.5.1cpemeB146
Cp4.1LG12g05920Cucumber (Gy14) v2cgybcpeB904
Cp4.1LG12g05920Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g05920Silver-seed gourdcarcpeB0158
Cp4.1LG12g05920Silver-seed gourdcarcpeB1070
Cp4.1LG12g05920Silver-seed gourdcarcpeB1143