Cp4.1LG12g05880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g05880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Syntaxin, putative
Location	Cp4.1LG12 : 7883999 .. 7887646 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAAGGCCCGCCTGAATCCTGATCTGTTTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCGCGAAATTTCTTCATTCCGGGGGGAGTTGTTCAATGTTCGATTCGAACATTGAATTCTTCAATTCATTTCATTTTTACGCAGGAACTGACTCGAGTTTTTCGATTCTGATCATTCTTGAACTCTCTACTCACTGATTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGGTATAGAGTCTTTTTTTTTGTTCTAGCTTTTCTTCCAAAGTTCTTTTGCATTTTTCTTTTATTAAATTTGGTCTAGTAAGTGCATAAATTGCTTGTGCTGAATTATTTTCTTAGCGATGTGGAGTATCTGGATGGAAAATTGAACTTCTACTCTGACATTCAATTAAAAGATTTTTCTTATTTGCGTCAGTGAAGTTTTCTTGCATCAAACGCGTATTTGTGACTTCCTTTTTCTAGAGTAGTTCTGGTGAAATTTTGAAGAGCAGATAAGAAGACATCATCAACGCATTCTTGCCACCCCGCCCCCCATACCTACTTGGAGTTGAAGAATTGTAATTCTTCGAACTGCTTGACAAAATCATACCTCAGCAGGAAATGCCAATATAGGTTTCTTGACAATATTTCATTAATTAACTGAGTGAATGGTGTCAAGACTCGGATAGTGAAGGTTAATGAATTAAGTTTACCAAAATGTCCGGTACTGAGCATTGAAGGCACACATTTCAAATGGTTGATGATCATAGGGAGGTTTAACTTTTAACTTACAATGGATCTGCTTAGAATTTGAAGGTTTCTGTCTGAGTAATTTAGCAAAATATTAACTCGTACTCTCCTGACTGTAATATTGTATCTGAGGTGCAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGGTATGCTTGATTCTCACTAATTTTTTTTGCTTAATACTATGAATGATCCGACTTTGTATCTGAGTCATAGTTGGTCTTTTAGTAATTGCTTTCTGTTATTGCGTTTTTTCTATCTGTTGTTCTTTGTCGTTGGACCTTTTTTGTGCCACCGGGAAACTAATGTATGAAGTTCCTATAGACTTTTCACCTCCCTGAGAGTGTTTCTTGATTCTGGTTTTCAGGGTCTTTTAACAATTTGTTCCTTTTTGTGATGGATTGACTCCTTTTCTTAACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGTTTGTGCCCTGTGTTCAAACGGACCTATGAAAACTTTCTGAAAAAAAGAAGATTTCATCTGATTAGTTGGCTTGGTAGTTGGGGTATTTAAAATGAGTTTCATCTTTTTGTTCCCACCTTATAATTTTCTTGTACTTGTCACCAATCTATTAAAAATGTGTTAGATATAGTATGAAGAAACTTCTTTTCTGTTATGACAACTCTCTTCTCATTTCATTTGTTCATTCGTCTATCATTCTAGGATTATACTTTTCTTGGTAAAATCTGTAATTTGGTCAATAGTAAGTAATCTTTCGGGAGTCTCATCAATTGAAACAGTGTTATTTTTAGTGAGGTTTGATTACTTTTGTATTGCAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGTATGTGCTGATCTCTTTGGTTACCTGGGAATTTCAAGTCTGAACTTTTCTTATGCAAGGGATGATTTTTGAGAACTCGAAGCACAAATTAACATGTTATTTTTTTTAACTCCAAATGTTTTTTACTGTCAAATCTTTTTGGATGTTCCATGTTGATAAGTGGATATTGCTTCAGTGGTTGGTTTTGTTAATCATATGCCTGAGTTAAATGTCATATTGTTTTGGATGCTAGGATAGCATATTGCCATTTGATAATTCTTTTGGGTGTGGTTTTTATGATACAATATATCATTGTCTCTCACTTCTCCTTGATTGGTACTTCTGTGTGGGATCAGGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTATGGAAGGTTCTTGTATCGGAGTTGCGAGACGAACTATTCACAATGTGATAAATATAAGTCTTTTTATTATGTGTAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGTAAAGACCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGTTTGTCAATCTGGGTTTACAATCAACTAATGAACGTTGTGATTTTATCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGTGATCCAAAAACTGAGATATCAAATAGTTCAAGAGTTTTGAGAATTGTATTTGTTTCCTCACCGTTCTCTACCATAATTTTTATCTCTCTTAAAAAATTATTAGAATTCATAGCCAAATTCCGAAATAAAAGGTTTCGAAAACCCATTGTATAAAGTAGATGAGTTCTTAGGTAAAAGTAATGTTTATAAACTTCTAAAACTAAATGATTATCAAATGTGAGCCGAATTCCCAAAATAAAAAACAATTTAAGTTTTTTCTTTCAAAACTAGGCATGGGTTTAGAAAACCCATCGTATAATTTGATAAGTTCTTAGGTAAAAGTAATGTTTATAAACTTCTCAACCTAAATGAGTCGAACATTTCATATTATTGGTGGTTTAATGATGATTTTGGTGAAAAGATAAGGGATGATGGTGGGATGTTTTGCCATCTGCAGGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGATAGAATATCTCAATTAGTTGAGTGTTTTGTTGAGAATT

mRNA sequence

CAACAAGGCCCGCCTGAATCCTGATCTGTTTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCGCGAAATTTCTTCATTCCGGGGGGAGTTGTTCAATGTTCGATTCGAACATTGAATTCTTCAATTCATTTCATTTTTACGCAGGAACTGACTCGAGTTTTTCGATTCTGATCATTCTTGAACTCTCTACTCACTGATTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGATAGAATATCTCAATTAGTTGAGTGTTTTGTTGAGAATT

Coding sequence (CDS)

ATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGA

Protein sequence

MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSKITVICREESEEWRNGEVCNGACYYVFHNAGSVDTEGDNYVTNVALWLVADKDFDNCMRLVSSKQVPFLSCIILRVSNVSLLK

Homology

[Close]

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot
Match: SYP42_ARATH (Syntaxin-42 OS=Arabidopsis thaliana GN=SYP42 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-91
Identity = 190/290 (65.52%), Postives = 228/290 (78.62%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGS-SGPVIEMVSSSLLRSKRSSDYAPLSTED 60
           MATRNRT  +R+HRDA KS RAPLS SA+ S  GPVIEMVS S  RS  SS YAPL++ D
Sbjct: 1   MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSS-YAPLNSYD 60

Query: 61  PGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTI 120
           PGPSSSDA  +G+PPAWVDDSEEIT NI ++R KM EL KAHSKALMP+F D K     +
Sbjct: 61  PGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREV 120

Query: 121 EALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLK 180
           E LT EIT+LL+ SEKRL+ +S+ G SE+ ++RKNVQRSLAT+LQNLSM+LRR+QS YLK
Sbjct: 121 EMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLK 180

Query: 181 HLQQQKEGHDGIDLEINLNGSRT-LQDDDRYDEFGTNEHQTMTFGMDAQHIQG-REKEIK 240
            LQQQKEG D +DLE N+NG  + L ++D     G +EHQT+    + QH+   RE+EI+
Sbjct: 181 RLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKL-KEGQHVSAEREREIQ 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           QV+ SVN+LAQIMKDLS LVIDQGTIVDRID+N+QNV+ SVEEGYKQLQK
Sbjct: 241 QVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQK 288

[Close]

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot
Match: SYP41_ARATH (Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.5e-88
Identity = 188/292 (64.38%), Postives = 233/292 (79.79%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSA-----AGSSGPVIEMVSSSLLRSKRSSDYAPL 60
           MATRNRT  FR++R++++SVRAPLSSS+     +G  GPVIEM S+SLL   RS  YAP+
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRS--YAPI 60

Query: 61  STEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKED 120
           STEDPG SS  A+ VGLPPAWVD SEEI+VNI + R KMAEL KAH+KALMPSF DGKED
Sbjct: 61  STEDPGTSSKGAITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 120

Query: 121 QNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQS 180
           Q+ IE+LTQEIT LLK SEK+L+++S++G SED ++RKNVQRSLAT+LQ LSM+LR++QS
Sbjct: 121 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 180

Query: 181 MYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKE 240
            YLK L+QQKE  DG+DLE+NL+ +R   ++D + +   NEHQ        +    REKE
Sbjct: 181 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 240

Query: 241 IKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           I+QVV+SVN+LAQIMKDLS LVIDQGTIVDRID+NI+NVA +VE+G KQLQK
Sbjct: 241 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot
Match: SYP43_ARATH (Syntaxin-43 OS=Arabidopsis thaliana GN=SYP43 PE=2 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 1.9e-86
Identity = 188/321 (58.57%), Postives = 236/321 (73.52%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSS-------------GPVIEMVSSSLLRSK 60
           MATRNRT  FR++R++++SVRAP+ SS++ +              GPVIEM S+SLL   
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60

Query: 61  RSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMP 120
           RS  YAP+STEDPG SS   + VGLPP WVD SEEI+V I + R KMAEL KAH+KALMP
Sbjct: 61  RS--YAPVSTEDPGNSSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 120

Query: 121 SFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLS 180
           SF DGKEDQ+ IE LTQE+T LLK SEK+L+++S+ G SED ++RKNVQRSLAT+LQNLS
Sbjct: 121 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 180

Query: 181 MDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQ 240
           M+LR++QS YLK L+ QKE  DG DLE+NLNGSR   +DD +D+   +EHQ        +
Sbjct: 181 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 240

Query: 241 HIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 299
               REKEI+QVV+SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA++V++G KQLQK
Sbjct: 241 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 300

[Close]

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot
Match: STX16_HUMAN (Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 5.5e-25
Identity = 92/300 (30.67%), Postives = 150/300 (50.00%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAG--SSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATR  T  F   R+     R  L+   +   +S P+     ++ L        A +S  
Sbjct: 1   MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI 60

Query: 61  DPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKAL-MPSFADGKEDQN 120
              P ++  +    PP WVD  +EI  ++ +I++KM EL   H K L  P+  D  E+++
Sbjct: 61  SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTG---SSEDISIRKNVQRSLATELQNLSMDLRRRQ 180
            IE  TQEIT L    ++ ++ + S     S ++  +  NV  SLA  LQ LS   R  Q
Sbjct: 121 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 180

Query: 181 SMYLKHLQQQKE-GHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGRE 240
           S YLK ++ ++E      D  + L       DD+     G  E Q +    +   ++ RE
Sbjct: 181 SGYLKRMKNREERSQHFFDTSVPLMDDG---DDNTLYHRGFTEDQLVLVEQNTLMVEERE 240

Query: 241 KEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           +EI+Q+V+S+++L +I +DL  ++++QGT++DRID+N++      E+G KQL K     K
Sbjct: 241 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQK 297

[Close]

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot
Match: STX16_MOUSE (Syntaxin-16 OS=Mus musculus GN=Stx16 PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-25
Identity = 90/301 (29.90%), Postives = 150/301 (49.83%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAG--SSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATR  T  F   R+     R  L+   +   +S P+     ++ L        A +S  
Sbjct: 1   MATRRLTDAFLLLRNNSIQTRQLLAEQVSSHTTSSPLHSRSIAAELDELADDRMALVSGI 60

Query: 61  DPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKAL-MPSFADGKEDQN 120
              P ++  +    PP WVD  +EI  ++ +I++KM EL   H K L  P+  D  E+++
Sbjct: 61  SLDPEAAIGVTKRSPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTG----SSEDISIRKNVQRSLATELQNLSMDLRRR 180
            IE  TQE+T L    ++ ++ + S      S ++  + +NV  SLA  LQ LS   R  
Sbjct: 121 AIEITTQEVTQLFHRCQRAVQALPSRARRACSEQEERLLRNVVASLAQALQELSTSFRHA 180

Query: 181 QSMYLKHLQQQKE-GHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGR 240
           QS YLK ++ ++E      D  + L       DD      G  + Q +    +   ++ R
Sbjct: 181 QSDYLKRMKNREERSQHFFDTPVPLMDDG---DDATLYGQGFTDDQLVLVEQNTLMVEER 240

Query: 241 EKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLS 294
           E+EI+Q+V+S+++L +I +DL  ++++QGT++DRID+N++      E+G KQL K     
Sbjct: 241 EREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCVKTEDGLKQLHKAEQYQ 298

[Close]

BLAST of Cp4.1LG12g05880 vs. TrEMBL
Match: A0A0A0K7Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405900 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.2e-134
Identity = 265/293 (90.44%), Postives = 275/293 (93.86%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADG+ED++TIE
Sbjct: 61  GPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGEEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLK 
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKR 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+R LQ+DD YDEFGTNE+QTMT  +D +HIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRALQEDDGYDEFGTNENQTMT--LDGKHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 291

[Close]

BLAST of Cp4.1LG12g05880 vs. TrEMBL
Match: B9SAX1_RICCO (Syntaxin, putative OS=Ricinus communis GN=RCOM_1180040 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.1e-104
Identity = 219/336 (65.18%), Postives = 265/336 (78.87%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSS--AAGSSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATRNRT  F++HRDAVKSVRAPLSSS  A+GS+GPVIEMVS+S LRSK +S YAPLSTE
Sbjct: 1   MATRNRTLHFKKHRDAVKSVRAPLSSSSSASGSNGPVIEMVSTSFLRSKHAS-YAPLSTE 60

Query: 61  DPGPSSS-DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQN 120
           DPGPSSS DA  +GLPPAWVDDSEE++ NI +IR KMAELVKAH+KALMPSF DG++DQ 
Sbjct: 61  DPGPSSSSDAFTIGLPPAWVDDSEEVSANIQRIRIKMAELVKAHAKALMPSFGDGEDDQR 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMY 180
            IE LT+EIT+LL+ SEKRL+K+S++ S ED ++RKNVQRSLAT+LQNLS+DLRRRQS Y
Sbjct: 121 MIETLTREITDLLRKSEKRLQKLSASESPEDSNVRKNVQRSLATDLQNLSVDLRRRQSTY 180

Query: 181 LKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIK 240
           LK LQQQKEGHDG+D E+N N ++   +DD +++ G +E+Q        Q  + RE+EI 
Sbjct: 181 LKRLQQQKEGHDGVDFEMNSNENKFRYEDDEFNDVGFSEYQLTKLKKSKQLSEEREREIN 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKV-----LSLS 300
           QVV SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA SVEEG+KQLQK       +  
Sbjct: 241 QVVASVHELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLQKYDVGYPGAGG 300

Query: 301 KITVICREESEEWRNGEVCNGACYYVFHNAGSVDTE 329
           K+T        E RNG+VCN A +YVF +A + D +
Sbjct: 301 KVTA-------ERRNGDVCNSASHYVFRHASTPDPQ 328

[Close]

BLAST of Cp4.1LG12g05880 vs. TrEMBL
Match: W9RL30_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007470 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.3e-102
Identity = 211/289 (73.01%), Postives = 242/289 (83.74%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MA RNRT QFR+HRDAVKSVRAPLSSSA  S GPVIEMVS+SLL   RSS YAPLSTE+P
Sbjct: 1   MAARNRTVQFRKHRDAVKSVRAPLSSSAVASGGPVIEMVSASLLGPNRSS-YAPLSTEEP 60

Query: 61  GPSSS--DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNT 120
           GPSSS  DA  V LPP WVDDSEEI VNI + R KM ELVKAH+KALMPSF DG+EDQ+T
Sbjct: 61  GPSSSRRDAFTVRLPPDWVDDSEEIAVNIQRARIKMGELVKAHAKALMPSFGDGREDQHT 120

Query: 121 IEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYL 180
           IE LTQEIT+LL+ SEKRL+K S++GSSED ++RKNVQRSLAT+LQNLSMDLRR+QS YL
Sbjct: 121 IETLTQEITDLLRRSEKRLQKFSASGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYL 180

Query: 181 KHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQ 240
           K L+QQKEGHDG+DLE+NLN +R+  +DD + + G NEHQ           + RE+EIKQ
Sbjct: 181 KGLRQQKEGHDGVDLEMNLNDNRSRLEDDEFGDMGFNEHQMAKLKKSELLTEEREREIKQ 240

Query: 241 VVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           VV+SVNELAQIMKDLS+LVIDQGTIVDRID+NIQ+V+ASVEEG KQLQK
Sbjct: 241 VVQSVNELAQIMKDLSSLVIDQGTIVDRIDYNIQSVSASVEEGLKQLQK 288

[Close]

BLAST of Cp4.1LG12g05880 vs. TrEMBL
Match: A0A067K7J5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13981 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 7.3e-101
Identity = 204/287 (71.08%), Postives = 237/287 (82.58%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRT QF++HRDAVKSVR+PLSSSA+ S GPVIEMVS+S LRS  +S YAPLSTE+P
Sbjct: 1   MATRNRTMQFKKHRDAVKSVRSPLSSSASSSRGPVIEMVSTSFLRSNHTS-YAPLSTEEP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
            PSSSDA  +GLPP WVDDSEEI  NI  +R KMAELVKAH+KALMPSF DGKEDQ TIE
Sbjct: 61  VPSSSDAFTIGLPPDWVDDSEEIAANIQLVRTKMAELVKAHAKALMPSFGDGKEDQRTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT++IT+LL+ SEKRL+K+S++ S ED ++RKNVQRSLAT+LQN+SMDLRRRQS YLK 
Sbjct: 121 ALTRDITDLLRKSEKRLQKLSASESPEDSNVRKNVQRSLATDLQNISMDLRRRQSTYLKR 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQ+EG+DG+D EINLN  +   +D    + G NEHQ +         + RE+EIKQVV
Sbjct: 181 LQQQREGYDGVDFEINLNEKKFRYEDGESSDMGFNEHQMIKLKKSEHLTEEREREIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
            SVNELAQIMKDLS LVIDQGTIVDRID+NIQNVA SVEEG+KQLQK
Sbjct: 241 SSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVANSVEEGFKQLQK 286

[Close]

BLAST of Cp4.1LG12g05880 vs. TrEMBL
Match: A0A061DS27_THECC (Syntaxin of plants 42 isoform 1 OS=Theobroma cacao GN=TCM_004740 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 6.2e-100
Identity = 204/288 (70.83%), Postives = 235/288 (81.60%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLST-ED 60
           MATRNRT Q+++HRDA+KSVRAPLSSSA+ S GPVIEMV++S LRS R S Y PLST ED
Sbjct: 1   MATRNRTVQYKKHRDALKSVRAPLSSSASRSGGPVIEMVNASFLRSNRPS-YTPLSTEED 60

Query: 61  PGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTI 120
           PGPSSS A  +GLPP W+DDSEEI  NI + + KMAELVKAHSKALMPSF DGKEDQ  I
Sbjct: 61  PGPSSSGAFTIGLPPVWIDDSEEIAANIQRAKVKMAELVKAHSKALMPSFGDGKEDQRAI 120

Query: 121 EALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLK 180
           E LT+EIT+LL+ SEKRL+K+SS GSSED ++RKNVQRSLAT+LQ+LSMDLRR+QS YL+
Sbjct: 121 EGLTKEITDLLRKSEKRLQKLSSNGSSEDSNLRKNVQRSLATDLQSLSMDLRRKQSTYLR 180

Query: 181 HLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQV 240
            LQQQKEG DG+DLE+NLN +R   +D  + + G NEHQ             RE+EI QV
Sbjct: 181 RLQQQKEGQDGVDLELNLNENRNRLEDSEFSDVGFNEHQMSKLKQSEFSTLEREREITQV 240

Query: 241 VKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           VKSVNELAQIMKDLS LVIDQGTIVDRID+NIQNVA SVEEG+KQLQK
Sbjct: 241 VKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR10
Match: AT4G02195.1 (AT4G02195.1 syntaxin of plants 42)

HSP 1 Score: 337.8 bits (865), Expect = 8.5e-93
Identity = 190/290 (65.52%), Postives = 228/290 (78.62%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGS-SGPVIEMVSSSLLRSKRSSDYAPLSTED 60
           MATRNRT  +R+HRDA KS RAPLS SA+ S  GPVIEMVS S  RS  SS YAPL++ D
Sbjct: 1   MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSS-YAPLNSYD 60

Query: 61  PGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTI 120
           PGPSSSDA  +G+PPAWVDDSEEIT NI ++R KM EL KAHSKALMP+F D K     +
Sbjct: 61  PGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREV 120

Query: 121 EALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLK 180
           E LT EIT+LL+ SEKRL+ +S+ G SE+ ++RKNVQRSLAT+LQNLSM+LRR+QS YLK
Sbjct: 121 EMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLK 180

Query: 181 HLQQQKEGHDGIDLEINLNGSRT-LQDDDRYDEFGTNEHQTMTFGMDAQHIQG-REKEIK 240
            LQQQKEG D +DLE N+NG  + L ++D     G +EHQT+    + QH+   RE+EI+
Sbjct: 181 RLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKL-KEGQHVSAEREREIQ 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           QV+ SVN+LAQIMKDLS LVIDQGTIVDRID+N+QNV+ SVEEGYKQLQK
Sbjct: 241 QVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQK 288

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR10
Match: AT5G26980.1 (AT5G26980.1 syntaxin of plants 41)

HSP 1 Score: 326.2 bits (835), Expect = 2.6e-89
Identity = 188/292 (64.38%), Postives = 233/292 (79.79%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSA-----AGSSGPVIEMVSSSLLRSKRSSDYAPL 60
           MATRNRT  FR++R++++SVRAPLSSS+     +G  GPVIEM S+SLL   RS  YAP+
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRS--YAPI 60

Query: 61  STEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKED 120
           STEDPG SS  A+ VGLPPAWVD SEEI+VNI + R KMAEL KAH+KALMPSF DGKED
Sbjct: 61  STEDPGTSSKGAITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 120

Query: 121 QNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQS 180
           Q+ IE+LTQEIT LLK SEK+L+++S++G SED ++RKNVQRSLAT+LQ LSM+LR++QS
Sbjct: 121 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 180

Query: 181 MYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKE 240
            YLK L+QQKE  DG+DLE+NL+ +R   ++D + +   NEHQ        +    REKE
Sbjct: 181 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 240

Query: 241 IKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           I+QVV+SVN+LAQIMKDLS LVIDQGTIVDRID+NI+NVA +VE+G KQLQK
Sbjct: 241 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR10
Match: AT3G05710.2 (AT3G05710.2 syntaxin of plants 43)

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-87
Identity = 188/321 (58.57%), Postives = 236/321 (73.52%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSS-------------GPVIEMVSSSLLRSK 60
           MATRNRT  FR++R++++SVRAP+ SS++ +              GPVIEM S+SLL   
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60

Query: 61  RSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMP 120
           RS  YAP+STEDPG SS   + VGLPP WVD SEEI+V I + R KMAEL KAH+KALMP
Sbjct: 61  RS--YAPVSTEDPGNSSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 120

Query: 121 SFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLS 180
           SF DGKEDQ+ IE LTQE+T LLK SEK+L+++S+ G SED ++RKNVQRSLAT+LQNLS
Sbjct: 121 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 180

Query: 181 MDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQ 240
           M+LR++QS YLK L+ QKE  DG DLE+NLNGSR   +DD +D+   +EHQ        +
Sbjct: 181 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 240

Query: 241 HIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 299
               REKEI+QVV+SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA++V++G KQLQK
Sbjct: 241 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 300

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: gi|659101273|ref|XP_008451520.1| (PREDICTED: syntaxin-42 isoform X1 [Cucumis melo])

HSP 1 Score: 493.4 bits (1269), Expect = 3.4e-136
Identity = 268/293 (91.47%), Postives = 276/293 (94.20%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADGKED++TIE
Sbjct: 61  GPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+RT Q+DD YDEFGTNE+QTMT  +D QHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRTFQEDDGYDEFGTNENQTMT--LDGQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 291

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: gi|659101275|ref|XP_008451521.1| (PREDICTED: syntaxin-42 isoform X2 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 2.5e-134
Identity = 267/293 (91.13%), Postives = 275/293 (93.86%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GP SSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADGKED++TIE
Sbjct: 61  GP-SSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+RT Q+DD YDEFGTNE+QTMT  +D QHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRTFQEDDGYDEFGTNENQTMT--LDGQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 290

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: gi|449436455|ref|XP_004136008.1| (PREDICTED: syntaxin-42 isoform X1 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 3.2e-134
Identity = 265/293 (90.44%), Postives = 275/293 (93.86%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADG+ED++TIE
Sbjct: 61  GPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGEEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLK 
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKR 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+R LQ+DD YDEFGTNE+QTMT  +D +HIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRALQEDDGYDEFGTNENQTMT--LDGKHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 291

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: gi|778728167|ref|XP_011659380.1| (PREDICTED: syntaxin-42 isoform X2 [Cucumis sativus])

HSP 1 Score: 480.7 bits (1236), Expect = 2.3e-132
Identity = 264/293 (90.10%), Postives = 274/293 (93.52%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GP SSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADG+ED++TIE
Sbjct: 61  GP-SSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGEEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLK 
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKR 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+R LQ+DD YDEFGTNE+QTMT  +D +HIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRALQEDDGYDEFGTNENQTMT--LDGKHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 290

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: gi|223537702|gb|EEF39325.1| (syntaxin, putative [Ricinus communis])

HSP 1 Score: 388.3 bits (996), Expect = 1.6e-104
Identity = 219/336 (65.18%), Postives = 265/336 (78.87%), Query Frame = 1


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSS--AAGSSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATRNRT  F++HRDAVKSVRAPLSSS  A+GS+GPVIEMVS+S LRSK +S YAPLSTE
Sbjct: 1   MATRNRTLHFKKHRDAVKSVRAPLSSSSSASGSNGPVIEMVSTSFLRSKHAS-YAPLSTE 60

Query: 61  DPGPSSS-DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQN 120
           DPGPSSS DA  +GLPPAWVDDSEE++ NI +IR KMAELVKAH+KALMPSF DG++DQ 
Sbjct: 61  DPGPSSSSDAFTIGLPPAWVDDSEEVSANIQRIRIKMAELVKAHAKALMPSFGDGEDDQR 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMY 180
            IE LT+EIT+LL+ SEKRL+K+S++ S ED ++RKNVQRSLAT+LQNLS+DLRRRQS Y
Sbjct: 121 MIETLTREITDLLRKSEKRLQKLSASESPEDSNVRKNVQRSLATDLQNLSVDLRRRQSTY 180

Query: 181 LKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIK 240
           LK LQQQKEGHDG+D E+N N ++   +DD +++ G +E+Q        Q  + RE+EI 
Sbjct: 181 LKRLQQQKEGHDGVDFEMNSNENKFRYEDDEFNDVGFSEYQLTKLKKSKQLSEEREREIN 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKV-----LSLS 300
           QVV SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA SVEEG+KQLQK       +  
Sbjct: 241 QVVASVHELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLQKYDVGYPGAGG 300

Query: 301 KITVICREESEEWRNGEVCNGACYYVFHNAGSVDTE 329
           K+T        E RNG+VCN A +YVF +A + D +
Sbjct: 301 KVTA-------ERRNGDVCNSASHYVFRHASTPDPQ 328

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g05880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYP42_ARATH	1.5e-91	65.52	Syntaxin-42 OS=Arabidopsis thaliana GN=SYP42 PE=1 SV=1	[more]
SYP41_ARATH	4.5e-88	64.38	Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1	[more]
SYP43_ARATH	1.9e-86	58.57	Syntaxin-43 OS=Arabidopsis thaliana GN=SYP43 PE=2 SV=2	[more]
STX16_HUMAN	5.5e-25	30.67	Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3	[more]
STX16_MOUSE	7.1e-25	29.90	Syntaxin-16 OS=Mus musculus GN=Stx16 PE=1 SV=3	[more]

BLAST of Cp4.1LG12g05880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Y7_CUCSA	2.2e-134	90.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405900 PE=3 SV=1	[more]
B9SAX1_RICCO	1.1e-104	65.18	Syntaxin, putative OS=Ricinus communis GN=RCOM_1180040 PE=3 SV=1	[more]
W9RL30_9ROSA	2.3e-102	73.01	Uncharacterized protein OS=Morus notabilis GN=L484_007470 PE=3 SV=1	[more]
A0A067K7J5_JATCU	7.3e-101	71.08	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13981 PE=3 SV=1	[more]
A0A061DS27_THECC	6.2e-100	70.83	Syntaxin of plants 42 isoform 1 OS=Theobroma cacao GN=TCM_004740 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g05880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02195.1	8.5e-93	65.52	syntaxin of plants 42	[more]
AT5G26980.1	2.6e-89	64.38	syntaxin of plants 41	[more]
AT3G05710.2	1.1e-87	58.57	syntaxin of plants 43	[more]

BLAST of Cp4.1LG12g05880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101273\|ref\|XP_008451520.1\|	3.4e-136	91.47	PREDICTED: syntaxin-42 isoform X1 [Cucumis melo]	[more]
gi\|659101275\|ref\|XP_008451521.1\|	2.5e-134	91.13	PREDICTED: syntaxin-42 isoform X2 [Cucumis melo]	[more]
gi\|449436455\|ref\|XP_004136008.1\|	3.2e-134	90.44	PREDICTED: syntaxin-42 isoform X1 [Cucumis sativus]	[more]
gi\|778728167\|ref\|XP_011659380.1\|	2.3e-132	90.10	PREDICTED: syntaxin-42 isoform X2 [Cucumis sativus]	[more]
gi\|223537702\|gb\|EEF39325.1\|	1.6e-104	65.18	syntaxin, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport
GO:0006886	intracellular protein transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005484	SNAP receptor activity
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR010989	SNARE
IPR006012	Syntaxin/epimorphin_CS
IPR006011	Syntaxin_N
IPR000727	T_SNARE_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0009306	protein secretion
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:1900150	regulation of defense response to fungus
biological_process	GO:0010200	response to chitin
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g05880.1	Cp4.1LG12g05880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 221..288 score: 2.3
IPR000727	Target SNARE coiled-coil homology domain	PROFILE	PS50192	T_SNARE	coord: 226..288 score: 17
IPR006011	Syntaxin, N-terminal domain	SMART	SM00503	SynN_4	coord: 67..182 score: 2.2
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 232..271 scor
IPR010989	t-SNARE	unknown	SSF47661	t-snare proteins	coord: 72..281 score: 7.85
None	No IPR available	GENE3D	G3DSA:1.20.58.70		coord: 72..281 score: 8.5
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 3..287 score: 2.5E
None	No IPR available	PANTHER	PTHR19957:SF108	SUBFAMILY NOT NAMED	coord: 3..287 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g05880	Cucsa.205270	Cucumber (Gy14) v1	cgycpeB0579
Cp4.1LG12g05880	CmaCh17G010600	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g05880	CmoCh17G010310	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g05880	Cla015110	Watermelon (97103) v1	cpewmB131
Cp4.1LG12g05880	Csa7G405900	Cucumber (Chinese Long) v2	cpecuB161
Cp4.1LG12g05880	MELO3C015953	Melon (DHL92) v3.5.1	cpemeB118
Cp4.1LG12g05880	ClCG09G005420	Watermelon (Charleston Gray)	cpewcgB126
Cp4.1LG12g05880	CSPI07G17860	Wild cucumber (PI 183967)	cpecpiB163
Cp4.1LG12g05880	Lsi02G024410	Bottle gourd (USVL1VR-Ls)	cpelsiB113
Cp4.1LG12g05880	MELO3C015953.2	Melon (DHL92) v3.6.1	cpemedB145
Cp4.1LG12g05880	CsaV3_7G029670	Cucumber (Chinese Long) v3	cpecucB0188
Cp4.1LG12g05880	Bhi09G000773	Wax gourd	cpewgoB0210
Cp4.1LG12g05880	CsGy7G016320	Cucumber (Gy14) v2	cgybcpeB906
Cp4.1LG12g05880	Carg07148	Silver-seed gourd	carcpeB0158

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g05880	Wax gourd	cpewgoB0171
Cp4.1LG12g05880	Cucurbita pepo (Zucchini)	cpecpeB157
Cp4.1LG12g05880	Cucumber (Gy14) v1	cgycpeB0185
Cp4.1LG12g05880	Cucurbita maxima (Rimu)	cmacpeB260
Cp4.1LG12g05880	Cucurbita maxima (Rimu)	cmacpeB465
Cp4.1LG12g05880	Cucurbita maxima (Rimu)	cmacpeB902
Cp4.1LG12g05880	Cucurbita moschata (Rifu)	cmocpeB224
Cp4.1LG12g05880	Cucurbita moschata (Rifu)	cmocpeB425
Cp4.1LG12g05880	Cucurbita moschata (Rifu)	cmocpeB839
Cp4.1LG12g05880	Wild cucumber (PI 183967)	cpecpiB141
Cp4.1LG12g05880	Cucumber (Chinese Long) v2	cpecuB139
Cp4.1LG12g05880	Bottle gourd (USVL1VR-Ls)	cpelsiB116
Cp4.1LG12g05880	Watermelon (Charleston Gray)	cpewcgB134
Cp4.1LG12g05880	Watermelon (97103) v1	cpewmB141
Cp4.1LG12g05880	Melon (DHL92) v3.5.1	cpemeB146
Cp4.1LG12g05880	Cucumber (Gy14) v2	cgybcpeB904
Cp4.1LG12g05880	Melon (DHL92) v3.6.1	cpemedB172
Cp4.1LG12g05880	Silver-seed gourd	carcpeB0801
Cp4.1LG12g05880	Silver-seed gourd	carcpeB1070
Cp4.1LG12g05880	Silver-seed gourd	carcpeB1143
Cp4.1LG12g05880	Cucumber (Chinese Long) v3	cpecucB0162