Cp4.1LG12g05840 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDUF538 family protein
LocationCp4.1LG12 : 7954478 .. 7956409 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTCAAATATGGTGCTGATGATAGTCTTCTAAGCTGAAAATTGGCCGCATCAGAGACTGCTTTGTGGATTACTCATACATAAAGGTTTGCATGAGCTTCCCCCATAAGATCTTACAAATGGTAATTTATCATTTGCCATTCTTTAATGATAATCTTCCATTCATACAGGATAGAGTAGTAAATTCTGGGGTTTAGCCCTTGGAAGTGCAATGAATGATCTCTGGTTCATAGTTTAAACTGCTGTGTTTGTTCAATCTTTGTAATTTGTTGAATCGCATGATTTATAATGTGGAAGAAGAGTAAGGAATTGGAGATGTTTGTGTGGTAGTTGCAATAAATTAATAAAGGTTAAATGATATGTTTGGTATTGTTGTAGGGTACCTAATCCGTGTCCAAACTTCTAGATTTGTACATTTAGTTCTCGTAAATTTTTTTATTTCGTGTCTAATAATTGTTTTACGGTTAAGTTTATGACCTATTAGATAGAACTTCGAAAGTTCACGAACCCATTATCAAAAGCTTACAAGTCTACTAGCTATTTTTTTCGAAGTAGACTTAAAGTTTAGAAATTTGTTAAAATTATAGGGTCTATTTGGGAATGACATTTTTCTTTGCTCCGTTTGTGTTTGAACGGGTATGAAATTAACTTTTCAAGTACTTAAAATAGTGTTTTGCTTGTAAGGACTTGAAAAGATCATTCTAAAAGAACCTTGTACTAGTAGTCGTGTCTATCCATTGGCCTTGCGTTATCCTTTGGTAGCTGATAATTTCATTTTAACGACCAAGTCGTTAAAGTAACTTTTGAAAATTCTATTCTTCAAGTCACATTTTAGAGAAGAAAATGAGAAATTAAGAACGTTTTAGAGAGAAAAGAATTAAGAGAGTATTCAAAAAATAAGAAAAAAAAATGAAGAATTGTTAGTAAGGTGAGAAAGTAAATAAAAATGTGTACCTAAACTATTTATATTTTATGTCTATATACAAACCATAAAAACTTAAAAAAAAAATGTTTTCTATGGATTGCTGTCTGAAGTGTAAGGGTAAACTCGGACTCAGATAGGATAGGATTGTGCGCGTTGGGCCCTTTGGGTGTCATATTTTGGCCGAGTTTACCATACCTCCAGCCCTTAAACGGTATAAATGTTATTTTTGTATAGTGTATCTTTTAATTTTTGAGTGTAGTGTATCTTTTAATTTTTTAAAAAATTATAGTTATTTTTATTAATTTAGTATGTAATTATATAAATTTTAAATAAATTTATATAAAAATACGTGGGGGTATTTTGGATAATTTGACTAAAAAGATTTCCCCTTTGTAAAAGTCATTGAAGAATTAAATCCTCCATCTTCGCTCTCAATCCAAATCAATCAGAGCTCAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACCTCAGAAATCGAAGGAGATGAGTTTCTCAAAACTTATGGCTTCTCTTCTCTTCCTTGCTTTCGTTTCATTCTCGAGCCCTCTCGTCTCTGCTCAAAAAGCTCTTACCGCTTACGATATTATCCAACAGTACGGCTTCCCTGTCGGCATTCTTCCCCTCGGAGTAACCGGCTACAAATTGGACAGAGACACCGGATCATTCAGCCTCTTTTTGGATCAAAAGTGTAAATTCGCGATCGATTCGTACGAACTGGAGTACAAACCTACCGTCACGGGCGTGATTTCCCAAGGAAAACTCTCCAAACTGAAAGGTGTTTCTGTTAAGATCTTGATCCTGTGGTTCAGCATCGTGGAAGTCGTTAGCGATGGTGACGAACTCGGATTCTCCGTCGGGATTGCGTCTGCTAATTTTCCGATTGACAGTTTCTATGAGTCGCCTCAGTGTGGATGTGGATTTGACTGCAATAAGGTTGGGAGCTTGGTTTCGGCTTCTTGA

mRNA sequence

ATGGAGAGCTCAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACCTCAGAAATCGAAGGAGATGAGTTTCTCAAAACTTATGGCTTCTCTTCTCTTCCTTGCTTTCGTTTCATTCTCGAGCCCTCTCGTCTCTGCTCAAAAAGCTCTTACCGCTTACGATATTATCCAACAGTACGGCTTCCCTGTCGGCATTCTTCCCCTCGGAGTAACCGGCTACAAATTGGACAGAGACACCGGATCATTCAGCCTCTTTTTGGATCAAAAGTGTAAATTCGCGATCGATTCGTACGAACTGGAGTACAAACCTACCGTCACGGGCGTGATTTCCCAAGGAAAACTCTCCAAACTGAAAGGTGTTTCTGTTAAGATCTTGATCCTGTGGTTCAGCATCGTGGAAGTCGTTAGCGATGGTGACGAACTCGGATTCTCCGTCGGGATTGCGTCTGCTAATTTTCCGATTGACAGTTTCTATGAGTCGCCTCAGTGTGGATGTGGATTTGACTGCAATAAGGTTGGGAGCTTGGTTTCGGCTTCTTGA

Coding sequence (CDS)

ATGGAGAGCTCAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACCTCAGAAATCGAAGGAGATGAGTTTCTCAAAACTTATGGCTTCTCTTCTCTTCCTTGCTTTCGTTTCATTCTCGAGCCCTCTCGTCTCTGCTCAAAAAGCTCTTACCGCTTACGATATTATCCAACAGTACGGCTTCCCTGTCGGCATTCTTCCCCTCGGAGTAACCGGCTACAAATTGGACAGAGACACCGGATCATTCAGCCTCTTTTTGGATCAAAAGTGTAAATTCGCGATCGATTCGTACGAACTGGAGTACAAACCTACCGTCACGGGCGTGATTTCCCAAGGAAAACTCTCCAAACTGAAAGGTGTTTCTGTTAAGATCTTGATCCTGTGGTTCAGCATCGTGGAAGTCGTTAGCGATGGTGACGAACTCGGATTCTCCGTCGGGATTGCGTCTGCTAATTTTCCGATTGACAGTTTCTATGAGTCGCCTCAGTGTGGATGTGGATTTGACTGCAATAAGGTTGGGAGCTTGGTTTCGGCTTCTTGA

Protein sequence

MESSVKKKKKKKKKKKKKKKKKPQKSKEMSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIASANFPIDSFYESPQCGCGFDCNKVGSLVSAS
Homology
[Close]
BLAST of Cp4.1LG12g05840 vs. Swiss-Prot
Match: Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 27/95 (28.42%), Postives = 56/95 (58.95%), Query Frame = 1 

Query: 61  DIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKCKFAI-DSYELEYKPTVTGVISQG 120
           +++++Y  P+GI P   T Y+ D +T   ++ +   C+    DS  L++  TVTG + +G
Sbjct: 56  ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115

Query: 121 KLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGI 155
           KL+ ++G+  K++I W  +  + +D  ++ F+ G+
Sbjct: 116 KLTDVEGIKTKVMI-WVKVTSISTDASKVYFTAGM 149

[Close]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match: A0A0A0K7U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398110 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.6e-54
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 1 

Query: 43  FVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKCKFAID 102
           +VS +  +V  ++ALTAYDI+QQYGFPVGILP+G TGY+L+R TG FSL+L QKCKF ID
Sbjct: 5   WVSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID 64

Query: 103 SYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIASANFPID 162
           SYELEYK T+ GVIS+G++ KLKGVSVKI +LW SIVEVV+DGD+L FSVGIASANFP+D
Sbjct: 65  SYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLD 124

Query: 163 SFYESPQCGCGFDC-NKVGSLVSAS 187
           SFYESP+CGCGFDC N  GSLVSAS
Sbjct: 125 SFYESPRCGCGFDCDNGAGSLVSAS 149

[Close]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match: A0A0D2QRM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127500 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.9e-48
Identity = 92/152 (60.53%), Postives = 114/152 (75.00%), Query Frame = 1 

Query: 35  MASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLD 94
           + S++FL  VS  + L SA   L+AY ++QQY FP GILP GV+GY+L+R TG FS  L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 95  QKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGI 154
             C F IDSYEL YK T+ GVIS G+++ LKGVSVK+L  W  IV+V+ DGDE+ FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 155 ASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 187
           ASANFPID+FYESPQCGCGFDCN+  +  +AS
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCNRFNAFAAAS 154

[Close]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match: A0A0K9QGP0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180730 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.9e-44
Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 1 

Query: 32  SKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSL 91
           S    ++L L  +S S+   +   A TAY+I++ Y FP G+LP GVTGY+LDRDTG F +
Sbjct: 3   SSTTTTVLLLFILSLSTATAATSYAPTAYEILKSYDFPAGLLPTGVTGYELDRDTGKFKV 62

Query: 92  FLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFS 151
           FL + CKF+I+ Y+LEYK T+TGVIS G+L KLKG+SVK+L+LW +IVEV +   EL FS
Sbjct: 63  FLPETCKFSIEGYDLEYKSTITGVISSGRLYKLKGISVKVLLLWLNIVEVDNKHGELQFS 122

Query: 152 VGIASANFPIDSFYESPQCGCGFDCN--KVGSLVSAS 187
           VGI SANFP++ F ESP CGCGFDCN   + +LVS+S
Sbjct: 123 VGIMSANFPVEGFEESPSCGCGFDCNGANLAALVSSS 159

[Close]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match: A0A0D2R182_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091000 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.9e-44
Identity = 90/150 (60.00%), Postives = 114/150 (76.00%), Query Frame = 1 

Query: 38  LLFLAFVSF--SSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQ 97
           LLFL  +S   SS  V+    L+AY  +QQY FPVGILP GV GY+L+R+TG FS +L  
Sbjct: 8   LLFLILISLPASSFAVADDDNLSAYQALQQYDFPVGILPNGVVGYELNRETGEFSAYLSG 67

Query: 98  KCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIA 157
            CKF IDSY+L Y+ T+ GVIS G+++ LKGVSVKIL  W +I EV+ +GD++ FSVGIA
Sbjct: 68  ACKFDIDSYQLSYESTIKGVISPGRITNLKGVSVKILFFWLNIGEVIHNGDQMEFSVGIA 127

Query: 158 SANFPIDSFYESPQCGCGFDCNKVGSLVSA 186
           SANFPID+FYESPQCGCGF+CN + +L S+
Sbjct: 128 SANFPIDNFYESPQCGCGFNCNGLNALASS 157

[Close]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match: A0A061DQP6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004685 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 35  MASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLD 94
           + S++ L  +S  +   S  + L+AY ++QQY FP+GILP GV GY+L+RDTG FS +L+
Sbjct: 3   LRSVILLILISLPASFASTDEKLSAYQVLQQYDFPIGILPEGVIGYELNRDTGEFSAYLN 62

Query: 95  QKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGI 154
             C F I+SY+L YK TV GVIS+G+++KL GVSVK+L  W +IVE+   GDEL FSVGI
Sbjct: 63  GTCSFPIESYDLSYKSTVQGVISRGRITKLNGVSVKVLFFWLNIVELSRHGDELEFSVGI 122

Query: 155 ASANFPIDSFYESPQCGCGFDCNKVGSLVSA 186
           ASA+FPID+F+ESPQCGCG  CN++   VS+
Sbjct: 123 ASASFPIDNFFESPQCGCGLYCNQLNGFVSS 153

[Close]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match: AT1G02816.1 (AT1G02816.1 Protein of unknown function, DUF538)

HSP 1 Score: 167.2 bits (422), Expect = 9.9e-42
Identity = 81/147 (55.10%), Postives = 102/147 (69.39%), Query Frame = 1 

Query: 34  LMASLLFLAFVSFSSPLVSAQK---ALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFS 93
           L  S+ F       SPL++A       TAY ++Q Y FPVGILP GV  Y LD+ TG F 
Sbjct: 4   LPISIFFFFLFCIPSPLIAAANDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFH 63

Query: 94  LFLDQKCKFAID-SYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELG 153
            + ++ C FA+  SY+L+YK T++G IS+ K++KL GV VK+L LW +IVEV+ +GDEL 
Sbjct: 64  AYFNKSCSFALQGSYQLDYKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELE 123

Query: 154 FSVGIASANFPIDSFYESPQCGCGFDC 177
           FSVGI SANF ID FYESPQCGCGFDC
Sbjct: 124 FSVGITSANFEIDEFYESPQCGCGFDC 150

[Close]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match: AT4G02370.1 (AT4G02370.1 Protein of unknown function, DUF538)

HSP 1 Score: 157.5 bits (397), Expect = 7.8e-39
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 1 

Query: 34  LMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFL 93
           L+AS LFL+ ++ +    +     TAY ++Q Y FPVGILP GV  Y LD  TG F  + 
Sbjct: 7   LIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYF 66

Query: 94  DQKCKF-AIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSV 153
           +  C F  + SY+L YK T++G IS+ KL KL GV VK+L LW +IVEV+ +GDE+ FSV
Sbjct: 67  NDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSV 126

Query: 154 GIASANFPIDSFYESPQCGCGFDC 177
           GI SANF I  F ESPQCGCGF+C
Sbjct: 127 GITSANFAIQEFLESPQCGCGFEC 150

[Close]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match: AT4G02360.1 (AT4G02360.1 Protein of unknown function, DUF538)

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-38
Identity = 79/149 (53.02%), Postives = 101/149 (67.79%), Query Frame = 1 

Query: 29  MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 88
           MS      S++F  F + S   VS QK  TAYD ++ Y  P GILP GV  Y+L+  TG+
Sbjct: 1   MSLDANTCSIVFFLFFTVSFA-VSGQKP-TAYDAVKLYNLPPGILPKGVVDYELNPKTGN 60

Query: 89  FSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDEL 148
           F ++ +  C+F I SY+L+YK T++GVIS G +  LKGVSVK+L  W +I EV  DG +L
Sbjct: 61  FKVYFNDTCEFTIQSYQLKYKSTISGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGADL 120

Query: 149 GFSVGIASANFPIDSFYESPQCGCGFDCN 178
            FSVGIASA+FP  +F ESPQCGCGFDCN
Sbjct: 121 DFSVGIASASFPAANFEESPQCGCGFDCN 147

[Close]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match: AT1G02813.1 (AT1G02813.1 Protein of unknown function, DUF538)

HSP 1 Score: 135.2 bits (339), Expect = 4.2e-32
Identity = 64/139 (46.04%), Postives = 95/139 (68.35%), Query Frame = 1 

Query: 38  LLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKC 97
           ++FL  +S +S  VS QK  + Y +++ Y  P GILP GV  Y L+R TG F +  +  C
Sbjct: 5   IIFLLLLS-TSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTC 64

Query: 98  KFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIASA 157
           +F+IDSY+++YKP ++G+I++G++ +L GVSVK+L  W +I EV  DGD++ F VG AS 
Sbjct: 65  QFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASE 124

Query: 158 NFPIDSFYESPQCGCGFDC 177
            F    F +SP+CGCGF+C
Sbjct: 125 EFSSKYFVDSPKCGCGFNC 142

[Close]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match: AT5G19590.1 (AT5G19590.1 Protein of unknown function, DUF538)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 1 

Query: 29  MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 88
           M  S  + S+L L  +S   P    +K   A+  +  +GFP+G+LPL V  Y L++ +G 
Sbjct: 1   MKISLFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGD 60

Query: 89  FSLFLDQKCKFAI--DSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGD 148
           FSLFL+  CK  +  D+Y   Y   VTG ISQGK+++L+G+ V+     +SI  + S GD
Sbjct: 61  FSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGD 120

Query: 149 ELGFSVGIASANFPIDSFYESPQC 171
            L F V   +A +P  +F ES  C
Sbjct: 121 NLVFEVAGITAKYPSKNFDESLDC 144

[Close]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match: gi|659101339|ref|XP_008451556.1| (PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-61
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 1 

Query: 29  MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 88
           MSFSKL+ASLL LA +S S+ L+S  K LTAYDI+QQYGFPVGILP+G TGY+L+R TG 
Sbjct: 1   MSFSKLLASLLLLASISLSTSLISDPKTLTAYDILQQYGFPVGILPIGATGYELNRATGE 60

Query: 89  FSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDEL 148
           FSL+L+Q+CKF IDSYELEYK TV GVISQG++ KLKGVSVKI++LW SIVEVV+DGD+L
Sbjct: 61  FSLYLNQRCKFKIDSYELEYKSTVQGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGDDL 120

Query: 149 GFSVGIASANFPIDSFYESPQCGCGFDC-NKVGSLVSAS 187
            FSVGIASANFP+DSFYESP+CGCGFDC N  GSLVSAS
Sbjct: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 159

[Close]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match: gi|778728081|ref|XP_004136020.2| (PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 3.5e-57
Identity = 128/188 (68.09%), Postives = 159/188 (84.57%), Query Frame = 1 

Query: 3   SSVKKKKKKK---KKKKKKKKKKPQKSKEMSFSKLMASLLFLAFVSFSSPLVSAQKALTA 62
           SS++ KK+     ++++ +++ + ++SK+MSFSKLMASLL LA +S S+ LVS  +ALTA
Sbjct: 13  SSIQIKKRNSSELEEEETRRRGRRRRSKKMSFSKLMASLLLLASISLSTSLVSDPEALTA 72

Query: 63  YDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKCKFAIDSYELEYKPTVTGVISQG 122
           YDI+QQYGFPVGILP+G TGY+L+R TG FSL+L QKCKF IDSYELEYK T+ GVIS+G
Sbjct: 73  YDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDSYELEYKSTLQGVISKG 132

Query: 123 KLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIASANFPIDSFYESPQCGCGFDC-NK 182
           ++ KLKGVSVKI +LW SIVEVV+DGD+L FSVGIASANFP+DSFYESP+CGCGFDC N 
Sbjct: 133 RIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRCGCGFDCDNG 192

Query: 183 VGSLVSAS 187
            GSLVSAS
Sbjct: 193 AGSLVSAS 200

[Close]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match: gi|700189716|gb|KGN44949.1| (hypothetical protein Csa_7G398110 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 8.1e-54
Identity = 107/145 (73.79%), Postives = 126/145 (86.90%), Query Frame = 1 

Query: 43  FVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLDQKCKFAID 102
           +VS +  +V  ++ALTAYDI+QQYGFPVGILP+G TGY+L+R TG FSL+L QKCKF ID
Sbjct: 5   WVSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID 64

Query: 103 SYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGIASANFPID 162
           SYELEYK T+ GVIS+G++ KLKGVSVKI +LW SIVEVV+DGD+L FSVGIASANFP+D
Sbjct: 65  SYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLD 124

Query: 163 SFYESPQCGCGFDC-NKVGSLVSAS 187
           SFYESP+CGCGFDC N  GSLVSAS
Sbjct: 125 SFYESPRCGCGFDCDNGAGSLVSAS 149

[Close]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match: gi|823188091|ref|XP_012490398.1| (PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 92/152 (60.53%), Postives = 114/152 (75.00%), Query Frame = 1 

Query: 35  MASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGSFSLFLD 94
           + S++FL  VS  + L SA   L+AY ++QQY FP GILP GV+GY+L+R TG FS  L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 95  QKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDELGFSVGI 154
             C F IDSYEL YK T+ GVIS G+++ LKGVSVK+L  W  IV+V+ DGDE+ FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 155 ASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 187
           ASANFPID+FYESPQCGCGFDCN+  +  +AS
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCNRFNAFAAAS 154

[Close]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match: gi|1021482901|ref|XP_016184484.1| (PREDICTED: uncharacterized protein LOC107626181 [Arachis ipaensis])

HSP 1 Score: 187.2 bits (474), Expect = 2.6e-44
Identity = 90/159 (56.60%), Postives = 119/159 (74.84%), Query Frame = 1 

Query: 32  SKLMASLLFLAFVSFSSPL----VSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTG 91
           +K + SLLF  F   SS      +   + L+AYD++QQYGFPVG+LP G+ GY L+++TG
Sbjct: 6   TKFLFSLLFFLFSLKSSSSHASSIHEDEKLSAYDVLQQYGFPVGLLPKGIIGYALNKETG 65

Query: 92  SFSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDE 151
            F+ ++D  C F+I+ Y L+YK T+TGVI+QG+L  LKGVSVKIL+LW +IVEV  DGDE
Sbjct: 66  EFAAYMDATCSFSIEGYTLKYKSTITGVITQGRLYNLKGVSVKILLLWLNIVEVKRDGDE 125

Query: 152 LGFSVGIASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 187
           + FSVGIASANF +++FYESPQCGCGFDC  V +L  +S
Sbjct: 126 IQFSVGIASANFGVENFYESPQCGCGFDCVTVNTLPLSS 164

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5161_ARATH2.1e-0928.42Uncharacterized protein At5g01610 OS=Arabidopsis thaliana GN=At5g01610 PE=1 SV=1[more]
BLAST of Cp4.1LG12g05840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7U0_CUCSA5.6e-5473.79Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398110 PE=4 SV=1[more]
A0A0D2QRM0_GOSRA7.9e-4860.53Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127500 PE=4 SV=1[more]
A0A0K9QGP0_SPIOL6.9e-4456.69Uncharacterized protein OS=Spinacia oleracea GN=SOVF_180730 PE=4 SV=1[more]
A0A0D2R182_GOSRA6.9e-4460.00Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091000 PE=4 SV=1[more]
A0A061DQP6_THECC2.0e-4355.63Uncharacterized protein OS=Theobroma cacao GN=TCM_004685 PE=4 SV=1[more]
BLAST of Cp4.1LG12g05840 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02816.19.9e-4255.10 Protein of unknown function, DUF538[more]
AT4G02370.17.8e-3952.78 Protein of unknown function, DUF538[more]
AT4G02360.13.9e-3853.02 Protein of unknown function, DUF538[more]
AT1G02813.14.2e-3246.04 Protein of unknown function, DUF538[more]
AT5G19590.12.5e-2138.19 Protein of unknown function, DUF538[more]
BLAST of Cp4.1LG12g05840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101339|ref|XP_008451556.1|1.8e-6176.10PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo][more]
gi|778728081|ref|XP_004136020.2|3.5e-5768.09PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus][more]
gi|700189716|gb|KGN44949.1|8.1e-5473.79hypothetical protein Csa_7G398110 [Cucumis sativus][more]
gi|823188091|ref|XP_012490398.1|1.1e-4760.53PREDICTED: uncharacterized protein At5g01610-like [Gossypium raimondii][more]
gi|1021482901|ref|XP_016184484.1|2.6e-4456.60PREDICTED: uncharacterized protein LOC107626181 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007493DUF538
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05840.1Cp4.1LG12g05840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007493Protein of unknown function DUF538GENE3DG3DSA:2.30.240.10coord: 42..177
score: 4.8
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 59..164
score: 2.4
IPR007493Protein of unknown function DUF538unknownSSF141562At5g01610-likecoord: 27..176
score: 3.66
NoneNo IPR availablePANTHERPTHR31676FAMILY NOT NAMEDcoord: 31..179
score: 2.3
NoneNo IPR availablePANTHERPTHR31676:SF27F22D16.19 PROTEINcoord: 31..179
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05840Cucsa.205480Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g05840CmaCh17G010800Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05840CmaCh08G004300Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05840CmoCh08G004240Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05840CmoCh17G010530Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05840Cla015091Watermelon (97103) v1cpewmB131
Cp4.1LG12g05840Csa7G398100Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05840MELO3C015993Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05840ClCG09G005650Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05840CSPI07G17550Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05840Lsi02G024110Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05840MELO3C015993.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05840CsaV3_7G029340Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g05840Bhi09G000724Wax gourdcpewgoB0210
Cp4.1LG12g05840CsGy7G015980Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05840Carg12095Silver-seed gourdcarcpeB0801
Cp4.1LG12g05840Carg07166Silver-seed gourdcarcpeB0158
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g05840Cp4.1LG17g07250Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05840Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g05840Wax gourdcpewgoB0171
Cp4.1LG12g05840Wax gourdcpewgoB0193
Cp4.1LG12g05840Cucurbita pepo (Zucchini)cpecpeB193
Cp4.1LG12g05840Cucumber (Gy14) v1cgycpeB0185
Cp4.1LG12g05840Cucumber (Gy14) v1cgycpeB0669
Cp4.1LG12g05840Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05840Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g05840Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05840Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g05840Wild cucumber (PI 183967)cpecpiB140
Cp4.1LG12g05840Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g05840Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g05840Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g05840Watermelon (Charleston Gray)cpewcgB132
Cp4.1LG12g05840Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g05840Watermelon (97103) v1cpewmB138
Cp4.1LG12g05840Watermelon (97103) v1cpewmB141
Cp4.1LG12g05840Watermelon (97103) v1cpewmB153
Cp4.1LG12g05840Melon (DHL92) v3.5.1cpemeB144
Cp4.1LG12g05840Melon (DHL92) v3.5.1cpemeB146
Cp4.1LG12g05840Cucumber (Gy14) v2cgybcpeB309
Cp4.1LG12g05840Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g05840Silver-seed gourdcarcpeB1070
Cp4.1LG12g05840Silver-seed gourdcarcpeB1143