Cp4.1LG12g05710 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g05710
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPectin lyase-like superfamily protein, putative
LocationCp4.1LG12 : 7933419 .. 7935266 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAAACAAAACATTCTCGTTTACCATTTGTGCTTCCAAATTAAGACATTGCACCATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGTGAATCATAAACTTCAATCTTTTAATTTCGGAAAGAAAAAAAAAATTAAACATTTGATTTTCCACGTGGCAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGTAACTATAATTATGCATAATTCAATCACTTCTTATTTTAATAATAAATTAATTGTATTTAATTAATTAATTAATTTATTTATTTATTTTTGTGTAGTCGATTAAATTCTCGAAAGTGAACCATTCAATTGTTGATGGGCTGACTTCAATTAACAGCAAGGGCTTTCACACGACGGTGTTCAGATGCTACAATTTCACCGCAACCAACATGAACATTATGGCTCCGGGAAACAGCCCCAATACCGATGGAATGCACCTTAGCACCTCAACATTGATCAGCATCTCTAACAGCGTCATTGGCACCGGTGACGATTGTGTCTCTATTGGCCATAGTTGTGAGAAAGTCACCGTCACCAATATCACTTGTGGCCCTGGACATGGCATCAGTGTCGGTAGCTTGGGCAAGTATAAAACAGAGAGGAGTGTGTCGGACATTTTGGTGCAAAATTGCACCCTTTTCAACACCACCAATGGTGTCAGAATCAAGACATGGGCGGGCATGGTGACGGGGTCGGCCACGAGAATAACCTTCGACAACATTGTGATGGATAAAGTTAAAAACCCCATAATCATTGATCAAACCTACGGCACCAAGAAGAACAAGGTAACCACAACAAAAATGTTCTCTCCATGGTTTTGGTCTGAACTTCTTATTTTTTATTTATAAATCCAAGATCATTCTCTAAATTGGGGAATTTAAGAACTACAACTAATCTATGTAGGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAACATTAGTGTTCTTTTTTTACGTTGGATCCTTCGACCTTGGTGTCGTGTTTGGTTAGTGTTGACGGCCAAGCTTTCTTCATATAGTATTCCATTGTAAAATTGATTAAATTTAATCAATTTATAAAATCTCTCCTGAGATTATTAGTTTAATTTTACCTATATTTGAACTTGAATGCCACTG

mRNA sequence

AATCAAACAAAACATTCTCGTTTACCATTTGTGCTTCCAAATTAAGACATTGCACCATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAACATTAGTGTTCTTTTTTTACGTTGGATCCTTCGACCTTGGTGTCGTGTTTGGTTAGTGTTGACGGCCAAGCTTTCTTCATATAGTATTCCATTGTAAAATTGATTAAATTTAATCAATTTATAAAATCTCTCCTGAGATTATTAGTTTAATTTTACCTATATTTGAACTTGAATGCCACTG

Coding sequence (CDS)

ATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAA

Protein sequence

MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTTVSSCLNAKITTSGVQNPPACAV
Homology
[Close]
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-26
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 1 

Query: 69  GVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSR 128
           G F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVGPL F GPC+  
Sbjct: 39  GSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGPLNFTGPCKG- 98

Query: 129 PITVEIQGTVKATTDITQYSTT-EWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNK 188
            +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W  N C     
Sbjct: 99  DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD 158

Query: 189 CQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 244
           C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+N++  G S
Sbjct: 159 CKILPNS--LVMDFVNNGEVSGITLLNSKFF--HMNMYKCKDMLIKDVNVTAPGDS 208

[Close]
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.8e-25
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 1 

Query: 61  VDQNGNGDG-VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPL 120
           +D   +G G  F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVG L
Sbjct: 30  IDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGQL 89

Query: 121 VFAGPCQSRPITVEIQGTVKATTDITQYSTT-EWISIEDIIGFILTGSGVFDGQGPAAWP 180
            F GPC+   +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W 
Sbjct: 90  NFTGPCKG-DVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWS 149

Query: 181 YNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLS 240
            N C     C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+ ++
Sbjct: 150 KNSCTKKYDCKILPNS--LVMDFVNNGEVSGVTLLNSKFF--HMNMYQCKNMLIKDVTVT 208

Query: 241 YGGAS 244
             G S
Sbjct: 210 APGDS 208

[Close]
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 1 

Query: 61  VDQNGNGDG-VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPL 120
           +D   +G G  F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVG L
Sbjct: 30  IDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGQL 89

Query: 121 VFAGPCQSRPITVEIQGTVKATTDITQYSTT-EWISIEDIIGFILTGSGVFDGQGPAAWP 180
            F GPC+   +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W 
Sbjct: 90  NFTGPCKG-DVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWS 149

Query: 181 YNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLS 240
            N C     C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+ ++
Sbjct: 150 KNSCTKKYDCKILPNS--LVMDFVNNGEVSGVTLLNSKFF--HMNMYRCKDMLIKDVTVT 208

Query: 241 YGGAS 244
             G S
Sbjct: 210 APGDS 208

[Close]
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 1 

Query: 64  NGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAG 123
           N     V+++  +GA  +G T+  +AF+ TWI  C ++  PAT L+P+GTFL GP++FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC-DSPVPATLLVPKGTFLAGPVIFAG 104

Query: 124 PCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCK 183
           PC+S+ +TV + GT+ ATT  + Y+T EW   E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKSK-VTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 184 TNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 243
              +C   P + K++    + KN+     ++V        L   E V +++I L+   A 
Sbjct: 165 KKVQCNLPPTSLKFR----NMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLT-APAE 224

Query: 244 LRNTTTV--SSCLNAKITTSGVQNPPAC 270
             NT  +  S+  N  I  S +     C
Sbjct: 225 SPNTDGIHLSNADNVSILDSTIATGDDC 243

[Close]
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 61/195 (31.28%), Postives = 100/195 (51.28%), Query Frame = 1 

Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV +YGAK  G  D +QA M  W AAC +  GP+T LIP+G + +G +   GPC+   
Sbjct: 9   VFNVNDYGAKGAG--DISQAVMKAWKAACAS-QGPSTVLIPKGNYNMGEVAMQGPCKGSK 68

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I  +I G VKA  D +++ +  W+S   I G  ++G+G  DGQG  AW  N+C  N  C+
Sbjct: 69  IGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCK 128

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
               A   +   +    +R  ++ N  +      +  CE +  + + ++  G S+ NT  
Sbjct: 129 HA--AMNLRFDFLKHAMVRDITSLNSKMF--HINVLECEDITFQHVTVTAPGTSI-NTDG 188

Query: 250 VSSCLNAKITTSGVQ 265
           +   ++  +T +  +
Sbjct: 189 IHVGISKGVTITNTK 195

[Close]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match: A0A0A0K588_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G353000 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.4e-63
Identity = 130/209 (62.20%), Postives = 150/209 (71.77%), Query Frame = 1 

Query: 4   TRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI--------------------G 63
           TRNL L Q LL VF+WQCCA    +  D+TG  NR+ GI                     
Sbjct: 2   TRNLSLIQILLLVFAWQCCA---VVFYDITGTQNRLKGIVPTTNEQFLRPTEAPRRLGFN 61

Query: 64  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 123
           TL+N GG+V  +D+KA VD N NG  +F+V  +GAKANGKTDDAQAFMTTWIAACRNT G
Sbjct: 62  TLSNIGGTV--NDIKANVDLNENGVSIFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVG 121

Query: 124 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 183
           PA FLIP+GTFLVGP+ FAGPC+S PIT+E +GTVKATTDI+ YS+ EW S+EDI GFIL
Sbjct: 122 PAKFLIPQGTFLVGPVTFAGPCKSFPITLENEGTVKATTDISAYSSPEWFSVEDITGFIL 181

Query: 184 TGSGVFDGQGPAAWPYNDCKTNNKCQALP 193
           TGSGVFDGQG + W YNDCK NN CQ LP
Sbjct: 182 TGSGVFDGQGLSVWSYNDCKKNNLCQLLP 205

[Close]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match: A0A0A0KAZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398720 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-60
Identity = 129/209 (61.72%), Postives = 144/209 (68.90%), Query Frame = 1 

Query: 4   TRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI--------------------G 63
           TRN  L Q LL VF+ QCCA    I DDVTG  N + GI                     
Sbjct: 2   TRNFSLIQILLLVFACQCCA---VIFDDVTGTQNLLKGIVPKANKQFLRPAESPRHLGFS 61

Query: 64  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 123
           TL N GG V  +D+KA VD N NG  VF+V  +GAK +G+TDDA AFMTTWIAACRNT G
Sbjct: 62  TLPNIGGRV--NDIKANVDLNENGGSVFDVTKHGAKGDGETDDAHAFMTTWIAACRNTVG 121

Query: 124 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 183
           P  FLIP+GTFLVGP+ FAGPC+S PIT+E QGTVKATTDI+ YS+ EW SIEDI GFIL
Sbjct: 122 PTKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPEWFSIEDITGFIL 181

Query: 184 TGSGVFDGQGPAAWPYNDCKTNNKCQALP 193
           TGSGVFDGQG + WPYNDCK NN CQ LP
Sbjct: 182 TGSGVFDGQGLSVWPYNDCKKNNLCQLLP 205

[Close]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match: A0A0A0KMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-55
Identity = 112/162 (69.14%), Postives = 129/162 (79.63%), Query Frame = 1 

Query: 36  ANRMDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWI 95
           A R  G  TL + GG+V  +D+ A VD N NG  VF+V  +GAKA+GKTDDAQAFMTTWI
Sbjct: 23  APRHLGFNTLPDIGGTV--NDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWI 82

Query: 96  AACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISI 155
           AACRNT GPA FLIP+GTFLVGP+ FAGPC+S PIT+E QGTVKATTDI+ YS+ EW S+
Sbjct: 83  AACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSL 142

Query: 156 EDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKW 198
           EDI GFILTGSGVFDGQG + WPYNDCK NN CQ LP + K+
Sbjct: 143 EDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKF 182

[Close]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match: A0A151U4K7_CAJCA (Exopolygalacturonase clone GBGE184 family OS=Cajanus cajan GN=KK1_006903 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-55
Identity = 113/228 (49.56%), Postives = 143/228 (62.72%), Query Frame = 1 

Query: 67  GDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQ 126
           G  +F+V  +GA A+ KTD+  AF   W  AC+N++  A  LIP GTF     +FAGPC 
Sbjct: 39  GPAIFDVTKFGAVADDKTDNIDAFRAAWGEACKNSTTHAKVLIPAGTFRAAQTMFAGPCT 98

Query: 127 S-RPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCK-T 186
           S +PITVE+ GTVKA TD ++Y + EW + +DI GF+LTG GVFDGQG A+WP+NDCK T
Sbjct: 99  SPKPITVEVMGTVKANTDPSEYVSPEWFTFQDIDGFVLTGKGVFDGQGAASWPFNDCKQT 158

Query: 187 NNKCQALPN-----------------------ASKWKISDIHFKNIRGTSTTNVAVLLEC 246
              C  LP+                        S WKIS+IHF+NI+GT+ +NVAV LEC
Sbjct: 159 KGNCAPLPSKSYFCINMVCMTSNEVYKCMTPSTSVWKISNIHFRNIKGTTVSNVAVSLEC 218

Query: 247 SELFPCEGVELRDINLSYGGASLRNTTTVSSCLNAKITTSGVQNPPAC 270
           S   PCEGVE+ D++L+Y G  L NTT  SSC NAK    G+ NPP C
Sbjct: 219 STRNPCEGVEITDVDLTYAGRLLINTTFASSCFNAKAIFGGILNPPPC 266

[Close]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match: A0A0A0K5G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-55
Identity = 126/256 (49.22%), Postives = 159/256 (62.11%), Query Frame = 1 

Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAI-PDDVTGAANRMD------------------G 60
           MT +R L LFQ LL VF+WQC   +AAI  DD+    N +                   G
Sbjct: 1   MTISRILSLFQILLLVFAWQCYDKVAAIITDDIANLNNEIISTINQQLIPSPTATPGPLG 60

Query: 61  IGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNT 120
           + TL +   +V  D      D N NG+ VF+V  +GAKA+GKTDDAQAF TTWIAACRNT
Sbjct: 61  METLPDLDDTV-NDSNNTNNDLNENGESVFDVTKHGAKADGKTDDAQAFETTWIAACRNT 120

Query: 121 SGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGF 180
            GP   LIP+GT+LVGP+  AGPC+S PIT+E QG VKATTD+++YS+ EW SIEDI GF
Sbjct: 121 VGPVKILIPKGTYLVGPMTLAGPCKSFPITIENQGIVKATTDLSEYSSPEWFSIEDITGF 180

Query: 181 ILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLEC 238
           ILTGSGVFDGQG A W YNDCK+N  CQ LP + K+  S ++   + G ++ N       
Sbjct: 181 ILTGSGVFDGQGTAVWAYNDCKSNKDCQLLPISIKF--SGLNHTIVDGITSLNSKGF--H 240

[Close]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match: AT1G02790.1 (AT1G02790.1 polygalacturonase 4)

HSP 1 Score: 114.8 bits (286), Expect = 8.5e-26
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 1 

Query: 64  NGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAG 123
           N     V+++  +GA  +G T+  +AF+ TWI  C ++  PAT L+P+GTFL GP++FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC-DSPVPATLLVPKGTFLAGPVIFAG 104

Query: 124 PCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCK 183
           PC+S+ +TV + GT+ ATT  + Y+T EW   E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKSK-VTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 184 TNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 243
              +C   P + K++    + KN+     ++V        L   E V +++I L+   A 
Sbjct: 165 KKVQCNLPPTSLKFR----NMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLT-APAE 224

Query: 244 LRNTTTV--SSCLNAKITTSGVQNPPAC 270
             NT  +  S+  N  I  S +     C
Sbjct: 225 SPNTDGIHLSNADNVSILDSTIATGDDC 243

[Close]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match: AT2G15460.1 (AT2G15460.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 1 

Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match: AT2G15450.1 (AT2G15450.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 1 

Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match: AT2G15470.1 (AT2G15470.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-24
Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 1 

Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F G C++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGLCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match: AT1G43080.1 (AT1G43080.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.6e-24
Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 1 

Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ YG++ +GKTD+A AF + W  AC   SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  +        WI+   I    ++GSG  DGQG  +WP NDC  N  C 
Sbjct: 90  IEFVIDGTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCP 149

Query: 190 AL 192
            L
Sbjct: 150 KL 150

[Close]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: gi|700189405|gb|KGN44638.1| (hypothetical protein Csa_7G353000 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 6.2e-63
Identity = 130/209 (62.20%), Postives = 150/209 (71.77%), Query Frame = 1 

Query: 4   TRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI--------------------G 63
           TRNL L Q LL VF+WQCCA    +  D+TG  NR+ GI                     
Sbjct: 2   TRNLSLIQILLLVFAWQCCA---VVFYDITGTQNRLKGIVPTTNEQFLRPTEAPRRLGFN 61

Query: 64  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 123
           TL+N GG+V  +D+KA VD N NG  +F+V  +GAKANGKTDDAQAFMTTWIAACRNT G
Sbjct: 62  TLSNIGGTV--NDIKANVDLNENGVSIFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVG 121

Query: 124 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 183
           PA FLIP+GTFLVGP+ FAGPC+S PIT+E +GTVKATTDI+ YS+ EW S+EDI GFIL
Sbjct: 122 PAKFLIPQGTFLVGPVTFAGPCKSFPITLENEGTVKATTDISAYSSPEWFSVEDITGFIL 181

Query: 184 TGSGVFDGQGPAAWPYNDCKTNNKCQALP 193
           TGSGVFDGQG + W YNDCK NN CQ LP
Sbjct: 182 TGSGVFDGQGLSVWSYNDCKKNNLCQLLP 205

[Close]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: gi|659101498|ref|XP_008451635.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 135/255 (52.94%), Postives = 165/255 (64.71%), Query Frame = 1 

Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTG-----------------AANRMDGIG 60
           MT TR++ LFQ LL VF+WQCC  ++AI +D+                   AA    GI 
Sbjct: 1   MTITRDIGLFQILLWVFAWQCCDKVSAITNDIANLNYEIVSTINQQLPSPVAAPGPLGIE 60

Query: 61  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 120
           TL +    V  DD+    D NGNG  VF+V  +GAKA+GKTDDAQAF+TTWI ACRNT G
Sbjct: 61  TLPDLDNMV-NDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNTVG 120

Query: 121 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 180
           PA  LIPEGT+LVGP+  AGPC+S PIT+E QGTVKATTDI+QYS+ EW SIEDI GFIL
Sbjct: 121 PAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGFIL 180

Query: 181 TGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKW-KISDIHFKNIRGTSTTNVAVLLECS 238
           TGSGVFDGQG AAWPYNDCK NN CQ LP + K+ +++D     +   ++    +     
Sbjct: 181 TGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHM----- 240

[Close]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: gi|778708423|ref|XP_011656188.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 128/214 (59.81%), Postives = 150/214 (70.09%), Query Frame = 1 

Query: 4   TRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI--------------------G 63
           TRNL L Q +L  F+WQ CA    I +D+TG  N + GI                     
Sbjct: 2   TRNLSLIQIILLEFAWQSCA---VIFNDITGTQNLLKGIVPTTNKQFLRPAEAPRHLGFN 61

Query: 64  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 123
           TL + GG+V  +D+ A VD N NG  VF+V  +GAKA+GKTDDAQAFMTTWIAACRNT G
Sbjct: 62  TLPDIGGTV--NDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVG 121

Query: 124 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 183
           PA FLIP+GTFLVGP+ FAGPC+S PIT+E QGTVKATTDI+ YS+ EW S+EDI GFIL
Sbjct: 122 PAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSLEDITGFIL 181

Query: 184 TGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKW 198
           TGSGVFDGQG + WPYNDCK NN CQ LP + K+
Sbjct: 182 TGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKF 210

[Close]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: gi|700189728|gb|KGN44961.1| (hypothetical protein Csa_7G398720 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.8e-60
Identity = 129/209 (61.72%), Postives = 144/209 (68.90%), Query Frame = 1 

Query: 4   TRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI--------------------G 63
           TRN  L Q LL VF+ QCCA    I DDVTG  N + GI                     
Sbjct: 2   TRNFSLIQILLLVFACQCCA---VIFDDVTGTQNLLKGIVPKANKQFLRPAESPRHLGFS 61

Query: 64  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 123
           TL N GG V  +D+KA VD N NG  VF+V  +GAK +G+TDDA AFMTTWIAACRNT G
Sbjct: 62  TLPNIGGRV--NDIKANVDLNENGGSVFDVTKHGAKGDGETDDAHAFMTTWIAACRNTVG 121

Query: 124 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 183
           P  FLIP+GTFLVGP+ FAGPC+S PIT+E QGTVKATTDI+ YS+ EW SIEDI GFIL
Sbjct: 122 PTKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPEWFSIEDITGFIL 181

Query: 184 TGSGVFDGQGPAAWPYNDCKTNNKCQALP 193
           TGSGVFDGQG + WPYNDCK NN CQ LP
Sbjct: 182 TGSGVFDGQGLSVWPYNDCKKNNLCQLLP 205

[Close]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: gi|700195561|gb|KGN50738.1| (hypothetical protein Csa_5G222970 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 112/162 (69.14%), Postives = 129/162 (79.63%), Query Frame = 1 

Query: 36  ANRMDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWI 95
           A R  G  TL + GG+V  +D+ A VD N NG  VF+V  +GAKA+GKTDDAQAFMTTWI
Sbjct: 23  APRHLGFNTLPDIGGTV--NDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWI 82

Query: 96  AACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISI 155
           AACRNT GPA FLIP+GTFLVGP+ FAGPC+S PIT+E QGTVKATTDI+ YS+ EW S+
Sbjct: 83  AACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSL 142

Query: 156 EDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKW 198
           EDI GFILTGSGVFDGQG + WPYNDCK NN CQ LP + K+
Sbjct: 143 EDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKF 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g05710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR3_MAIZE2.1e-2636.36Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1[more]
PGLR2_MAIZE8.8e-2534.59Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1[more]
PGLR1_MAIZE1.5e-2434.59Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1[more]
PGLR1_ARATH1.5e-2433.65Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1[more]
PGLR2_PLAAC1.2e-2131.28Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
BLAST of Cp4.1LG12g05710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K588_CUCSA4.4e-6362.20Uncharacterized protein OS=Cucumis sativus GN=Csa_7G353000 PE=3 SV=1[more]
A0A0A0KAZ2_CUCSA2.6e-6061.72Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398720 PE=3 SV=1[more]
A0A0A0KMA6_CUCSA2.0e-5569.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222970 PE=3 SV=1[more]
A0A151U4K7_CAJCA3.3e-5549.56Exopolygalacturonase clone GBGE184 family OS=Cajanus cajan GN=KK1_006903 PE=3 SV... [more]
A0A0A0K5G0_CUCSA4.4e-5549.22Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1[more]
BLAST of Cp4.1LG12g05710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02790.18.5e-2633.65 polygalacturonase 4[more]
AT2G15460.11.4e-2533.17 Pectin lyase-like superfamily protein[more]
AT2G15450.11.4e-2533.17 Pectin lyase-like superfamily protein[more]
AT2G15470.12.1e-2432.67 Pectin lyase-like superfamily protein[more]
AT1G43080.14.6e-2441.80 Pectin lyase-like superfamily protein[more]
BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189405|gb|KGN44638.1|6.2e-6362.20hypothetical protein Csa_7G353000 [Cucumis sativus][more]
gi|659101498|ref|XP_008451635.1|1.2e-6152.94PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|778708423|ref|XP_011656188.1|1.7e-6059.81PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|700189728|gb|KGN44961.1|3.8e-6061.72hypothetical protein Csa_7G398720 [Cucumis sativus][more]
gi|700195561|gb|KGN50738.1|2.8e-5569.14hypothetical protein Csa_5G222970 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g05710.1Cp4.1LG12g05710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 103..194
score: 3.0
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 70..184
score: 4.11E-27coord: 186..270
score: 4.54
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 68..194
score: 1.4E-30coord: 195..269
score: 2.0
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 4..193
score: 1.0
NoneNo IPR availablePANTHERPTHR31375:SF16SUBFAMILY NOT NAMEDcoord: 4..193
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g05710Cucsa.205390Cucumber (Gy14) v1cgycpeB0579
Cp4.1LG12g05710CmaCh17G010710Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g05710CmoCh17G010420Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g05710Cla015081Watermelon (97103) v1cpewmB138
Cp4.1LG12g05710ClCG09G005740Watermelon (Charleston Gray)cpewcgB132
Cp4.1LG12g05710Lsi02G024190Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g05710MELO3C015981.2Melon (DHL92) v3.6.1cpemedB145
Cp4.1LG12g05710CsaV3_7G029460Cucumber (Chinese Long) v3cpecucB0188
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g05710Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g05710Cucurbita pepo (Zucchini)cpecpeB193
Cp4.1LG12g05710Cucumber (Gy14) v1cgycpeB0185
Cp4.1LG12g05710Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g05710Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g05710Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g05710Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g05710Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g05710Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g05710Wild cucumber (PI 183967)cpecpiB141
Cp4.1LG12g05710Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g05710Cucumber (Chinese Long) v2cpecuB139
Cp4.1LG12g05710Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g05710Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g05710Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g05710Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g05710Watermelon (97103) v1cpewmB131
Cp4.1LG12g05710Watermelon (97103) v1cpewmB141
Cp4.1LG12g05710Melon (DHL92) v3.5.1cpemeB118
Cp4.1LG12g05710Melon (DHL92) v3.5.1cpemeB146
Cp4.1LG12g05710Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g05710Melon (DHL92) v3.6.1cpemedB172
Cp4.1LG12g05710Silver-seed gourdcarcpeB0158
Cp4.1LG12g05710Silver-seed gourdcarcpeB0801
Cp4.1LG12g05710Silver-seed gourdcarcpeB1070
Cp4.1LG12g05710Silver-seed gourdcarcpeB1143
Cp4.1LG12g05710Cucumber (Chinese Long) v3cpecucB0162
Cp4.1LG12g05710Wax gourdcpewgoB0171
Cp4.1LG12g05710Wax gourdcpewgoB0193
Cp4.1LG12g05710Wax gourdcpewgoB0210