Cp4.1LG12g05330 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATAATAATAAATAGTTCCAACTGCTTGGCATTTATTTCTGTTTGTGAGGAATTAAATTTTTGCCCCAACTCCCTGATTTTCTAACCAAACACACTTCCATCCCGCTTTGAATTCCTTTTTGTTCACTCCAAATGCTCTGTTTCGGCCTGGGAAGCTCTCGTTTCTTCTTCTTGCTGAAAGAATGCAGCTGAAGCCAGCAGCTACGGCCATGGATGGCGATGGCGATGGCGATGGCGTGAGAAGCCATGTGAAAGTTATCGAGAGCGCTAGAAGAAGACTGCGATGGCCCTTTGATGGGTTTGTGAGGTTTTTGGGTTTGGCTTTTACTTTAGTTGCTGCTGTTGTTGTGGGTGTTGATAATGAGTCCAAGATTCTCTCTGTTACTCTCATTAAGAGCTTGCCTCCTATCCATTTTTATGCTTCGGCTAAGTGGCAGTACATGTCTGCTTTTAAGTAAGTTTTCGTTGTTTCGCTGTTGTTTGTGATGTTTTGAGATGCCTTCTTGGTGTTTGATGAAATGCCTCTATGAGAGTTTTTAGTGTTTAGAGTCAATTATTGCTGAGTTATACTTACTTTGTTCTGATACCGATCGAGCCTTGTGATTTTCTTCTACCCTATACGACATAATGGGTTCTTGTTGCGTTGTTTGGTTTGTAGTTTTAAGTCATAACGTTCTTCTAAGAATGATACTTACCTACTCGTCTCGTGGGTGGAAACTCACAATGACCATTGTTGTGAAATTATATATTAAGAGTCTGCTTGGAATGACTTTTTAAGTGTTAAAAATATATACTTTTTCGCGCGAAAATATGTTTTTAAGATTTGAAAAATCATTTCAAAATCGATATTATCTTTTTAGGATTTTCCCTCAAAGTGAGTGAGAGATTTTCAAACCCTCGTAAAGAGTGTTCTGTTCTTCTTCACAATCGATGTGAGATTTTCACACCCTCATAAGCATTCATTATTTCCTTCTACGTGCCCTTCTTCAAATGCCTACACTACAATATATTGTGTGATTCAACCTCATTTATGTTCCAAAAACGTTCTTTTCTTTTTGTATTTCGATCTTTTTTTGTGGTTGAACCTCTAATTTTCTTTCGCTTAGGTACTTTGTGGTGTCGAACTGCATAGCATGTGCTTATGCTGCAGTATCCTTGGTGTACTCGGTTAAGACTCGAGGTCAAAAAGACGATCAAATGAGGTCGATGTTGCTCATATCTTTTGACCTGATCATGGTGGGGCTATTGTTCTCTGCCGATGGTGCTGCTGCAGCCATCGGAGTCATCGGTCGAGATGGGAACTCGCATATGCATTGGATAAAAGTCTGTGGTTTCTTTGAAGGTTACTGTCACCACTTCACAGCTGCACTTGTCATCTCCATTGCTGGTTCTGTCATGTTTCTTTGTTTGGTTGTGCTTTCTGTTCTGAATCTTCACAAGAAATGAAATTAGGGGATTGAATGTTTTAGTTTGTTGGTTGGGAGTTACTAGATTTGACTTCAACCTAGAGTTAGTATGGATTGAAGTAAATATGCTCCTTCCGACTCGTTTGCGCATTTCATCGACTGGTGCAATGCTTATGATAACATATTAGAAATCATAATGAGATTTTGTGACGTGAGATTTTTGTTGAAATTCTGTGTAAAATAT ATAAATAATAATAAATAGTTCCAACTGCTTGGCATTTATTTCTGTTTGTGAGGAATTAAATTTTTGCCCCAACTCCCTGATTTTCTAACCAAACACACTTCCATCCCGCTTTGAATTCCTTTTTGTTCACTCCAAATGCTCTGTTTCGGCCTGGGAAGCTCTCGTTTCTTCTTCTTGCTGAAAGAATGCAGCTGAAGCCAGCAGCTACGGCCATGGATGGCGATGGCGATGGCGATGGCGTGAGAAGCCATGTGAAAGTTATCGAGAGCGCTAGAAGAAGACTGCGATGGCCCTTTGATGGGTTTGTGAGGTTTTTGGGTTTGGCTTTTACTTTAGTTGCTGCTGTTGTTGTGGGTGTTGATAATGAGTCCAAGATTCTCTCTGTTACTCTCATTAAGAGCTTGCCTCCTATCCATTTTTATGCTTCGGCTAAGTGGCAGTACATGTCTGCTTTTAAGTACTTTGTGGTGTCGAACTGCATAGCATGTGCTTATGCTGCAGTATCCTTGGTGTACTCGGTTAAGACTCGAGGTCAAAAAGACGATCAAATGAGGTCGATGTTGCTCATATCTTTTGACCTGATCATGGTGGGGCTATTGTTCTCTGCCGATGGTGCTGCTGCAGCCATCGGAGTCATCGGTCGAGATGGGAACTCGCATATGCATTGGATAAAAGTCTGTGGTTTCTTTGAAGGTTACTGTCACCACTTCACAGCTGCACTTGTCATCTCCATTGCTGGTTCTGTCATGTTTCTTTGTTTGGTTGTGCTTTCTGTTCTGAATCTTCACAAGAAATGAAATTAGGGGATTGAATGTTTTAGTTTGTTGGTTGGGAGTTACTAGATTTGACTTCAACCTAGAGTTAGTATGGATTGAAGTAAATATGCTCCTTCCGACTCGTTTGCGCATTTCATCGACTGGTGCAATGCTTATGATAACATATTAGAAATCATAATGAGATTTTGTGACGTGAGATTTTTGTTGAAATTCTGTGTAAAATAT ATGCAGCTGAAGCCAGCAGCTACGGCCATGGATGGCGATGGCGATGGCGATGGCGTGAGAAGCCATGTGAAAGTTATCGAGAGCGCTAGAAGAAGACTGCGATGGCCCTTTGATGGGTTTGTGAGGTTTTTGGGTTTGGCTTTTACTTTAGTTGCTGCTGTTGTTGTGGGTGTTGATAATGAGTCCAAGATTCTCTCTGTTACTCTCATTAAGAGCTTGCCTCCTATCCATTTTTATGCTTCGGCTAAGTGGCAGTACATGTCTGCTTTTAAGTACTTTGTGGTGTCGAACTGCATAGCATGTGCTTATGCTGCAGTATCCTTGGTGTACTCGGTTAAGACTCGAGGTCAAAAAGACGATCAAATGAGGTCGATGTTGCTCATATCTTTTGACCTGATCATGGTGGGGCTATTGTTCTCTGCCGATGGTGCTGCTGCAGCCATCGGAGTCATCGGTCGAGATGGGAACTCGCATATGCATTGGATAAAAGTCTGTGGTTTCTTTGAAGGTTACTGTCACCACTTCACAGCTGCACTTGTCATCTCCATTGCTGGTTCTGTCATGTTTCTTTGTTTGGTTGTGCTTTCTGTTCTGAATCTTCACAAGAAATGA MQLKPAATAMDGDGDGDGVRSHVKVIESARRRLRWPFDGFVRFLGLAFTLVAAVVVGVDNESKILSVTLIKSLPPIHFYASAKWQYMSAFKYFVVSNCIACAYAAVSLVYSVKTRGQKDDQMRSMLLISFDLIMVGLLFSADGAAAAIGVIGRDGNSHMHWIKVCGFFEGYCHHFTAALVISIAGSVMFLCLVVLSVLNLHKK
BLAST of Cp4.1LG12g05330 vs. Swiss-Prot
Match: CSPL8_VITVI (CASP-like protein 1E1 OS=Vitis vinifera GN=VIT_07s0104g01350 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.6e-47 Identity = 103/191 (53.93%), Postives = 135/191 (70.68%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. Swiss-Prot
Match: CSPL5_VITVI (CASP-like protein 1E2 OS=Vitis vinifera GN=VIT_05s0020g01820 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.9e-36 Identity = 84/190 (44.21%), Postives = 124/190 (65.26%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. Swiss-Prot
Match: CSPL7_POPTR (CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2) HSP 1 Score: 145.2 bits (365), Expect = 7.8e-34 Identity = 77/166 (46.39%), Postives = 113/166 (68.07%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. Swiss-Prot
Match: CSPL6_SOYBN (CASP-like protein 1E1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33 Identity = 74/166 (44.58%), Postives = 109/166 (65.66%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. Swiss-Prot
Match: CSPL5_SOYBN (CASP-like protein 1E2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32 Identity = 76/187 (40.64%), Postives = 114/187 (60.96%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TrEMBL
Match: A0A0A0K573_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_7G394000 PE=3 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 3.6e-86 Identity = 169/201 (84.08%), Postives = 180/201 (89.55%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TrEMBL
Match: A0A061DQ55_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_004547 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.8e-45 Identity = 98/187 (52.41%), Postives = 134/187 (71.66%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TrEMBL
Match: V4TVB5_9ROSI (CASP-like protein OS=Citrus clementina GN=CICLE_v10023477mg PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.9e-44 Identity = 100/190 (52.63%), Postives = 137/190 (72.11%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TrEMBL
Match: A0A067HH41_CITSI (CASP-like protein OS=Citrus sinensis GN=CISIN_1g036940mg PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.9e-43 Identity = 99/190 (52.11%), Postives = 137/190 (72.11%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TrEMBL
Match: I1NB15_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_19G207000 PE=3 SV=2) HSP 1 Score: 183.0 bits (463), Expect = 3.7e-43 Identity = 98/197 (49.75%), Postives = 138/197 (70.05%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 132.5 bits (332), Expect = 2.9e-31 Identity = 70/160 (43.75%), Postives = 107/160 (66.88%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TAIR10
Match: AT4G15620.1 (AT4G15620.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 128.6 bits (322), Expect = 4.2e-30 Identity = 67/160 (41.88%), Postives = 105/160 (65.62%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TAIR10
Match: AT4G20390.1 (AT4G20390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 81.6 bits (200), Expect = 6.0e-16 Identity = 49/177 (27.68%), Postives = 92/177 (51.98%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 78.6 bits (192), Expect = 5.0e-15 Identity = 54/166 (32.53%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14 Identity = 47/160 (29.38%), Postives = 84/160 (52.50%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. NCBI nr
Match: gi|659101127|ref|XP_008451440.1| (PREDICTED: CASP-like protein VIT_07s0104g01350 [Cucumis melo]) HSP 1 Score: 333.2 bits (853), Expect = 3.2e-88 Identity = 170/198 (85.86%), Postives = 181/198 (91.41%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. NCBI nr
Match: gi|449436553|ref|XP_004136057.1| (PREDICTED: CASP-like protein 1E1 [Cucumis sativus]) HSP 1 Score: 325.9 bits (834), Expect = 5.1e-86 Identity = 169/201 (84.08%), Postives = 180/201 (89.55%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. NCBI nr
Match: gi|225436787|ref|XP_002268702.1| (PREDICTED: CASP-like protein 1E1 [Vitis vinifera]) HSP 1 Score: 189.5 bits (480), Expect = 5.7e-45 Identity = 103/191 (53.93%), Postives = 135/191 (70.68%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. NCBI nr
Match: gi|590718340|ref|XP_007050797.1| (CASP protein GSVIVT01010992001, putative [Theobroma cacao]) HSP 1 Score: 188.7 bits (478), Expect = 9.8e-45 Identity = 98/187 (52.41%), Postives = 134/187 (71.66%), Query Frame = 1
BLAST of Cp4.1LG12g05330 vs. NCBI nr
Match: gi|147794365|emb|CAN69352.1| (hypothetical protein VITISV_023954 [Vitis vinifera]) HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43 Identity = 101/191 (52.88%), Postives = 133/191 (69.63%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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