Cp4.1LG12g04600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionreduced male fertility
LocationCp4.1LG12 : 4320596 .. 4324788 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCCATCCTGATAGACGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCGTAGAAATGTGTCTGCCTGTGGAGGTAAATGCCTATGTGTTTTTTAGCATCGTGATAGTGAGGAAATTAAAATTTTATTTTCTAGAAGTGATTTGAATATCTTAGTTCAGAAATTTAAATGTGAAGTTATTTCCCGACTTTTAGACTCTTTGAGCTAGATTGTGAAGTTGCATTAGTTTAGTACTGCCAAGGACTTGGAAGTAGTAAGAAATAAACAATTCGAGTTGTTTCTGTAAGATTCCGAAGCTCAAAGTGAACGTCTGCAGAGTTAAATCTACTCAGCATAAACTTGTTCGTTTTCTCCATCGGGAGAAAACGATGGAGAAGAAACGTTTATTTTTGTGATTTTAGAATTTGCAGACTGAATGTGACAATCGTTGTTGGAAACCACTAGGCGTTGATGAACACTTTCTGGAGCTCTATAAAGTTAATCGTAAGTACAGTTAGTAATATAAGTAGGATGCCAAATCTTCAGTATAGTTTGAAGTGATTTTTTTCACAAGGATCGAAGCAGTTACAGGACTTACATTTTTTACTTTTTTTATCTAAACACTTTCTGGAGCTCTATCTAAAGCTTGTTCAACACTAACATACTTTTTTATCACATAAAGTATTCCGAGTCTCCTAGTTTTCTTATTAACTTCATCTTTTACTTTTCTATGTATTGTTTCTTGGTTCTACTTATAAGATTTCAAACGTGATTGTTCTATCTTTTTACATATTCAATTTTAAACCAGTTATTATTTTCAGTTTTAAGTAATCGGAAGTTCATTTGTTACCATTAGTCTGGCTTAAGTTTGGTAGATCGGGAATAAGATTGATGAATCACGTGAATTAGAAACTGTTTCTATCAGTTTGAATATTTCATCGGAAACAGAGCTAAGGATTAATATGTAATTTAACCTTCCGTATGACAATTTCCGCGAATGAACATGAAAGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGGTAAGGATCGGATTCGAGTTCTTTGAGTTATGTATTCCTGCTCTGGTCAATACGTATTGCGTTTGCTTAACTATTCAATGATCTCTGGTCCAGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTCGACTCCTGTAAGTAATTAGGCGCGGATTGTACTTAAAAGTAAAACTATATGTCAAGGACCTGCTTAGCCACGGGTTCTATCTAATCTTATCATCACATCTTACCTAATAACTAGATATTCAAGCTTTATTCAACCATAACTCAAGTCATTATAGAGGGTGGAGGTAGTATAAACCTACTATCTCGAGATTCCAAGGAATAAACTCCCAAAGCAACTGTACTGCTACTTTCCATCATGTATAAAATAGACATTTAGTGATCCTGATTCCAATATACTAATTGAACTGTAGTTAGCTTCTTTACCACATTGTTTATTATTTATTTATTTATTTTAAATGAAATCAGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGGTATCAAGCTTGCTAAATGTTTTTATCATTTTCTTTCAATGGTTGTCATAACTTGATACTCTATTAACCTTTTCTTAAGTGAATTATATTCTAAATGGACTAATGTGACAGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAGGTATCCCTAGTAACCATTCTGTATCCCACTAAAATGTAGGAACCTCTTTTTATTTCGATTGTTGCAAGATCTTAGCCTGCAGTTGTATCATTTTGGTAATTGGTATGCCATACTGTGTTTAAAAATATTGGGGAATTCATAGGCTTATTTTCTTCCGAATTTCATTGAAAATTAGTTTAATCTTGTTTCCAATACCTTAGGAAAGTGGAAGATACTGGGAGCACATACTCCTAATCAGCTGCTAATCAACCTTAGTTCAGTTTTTTTAGTAAGGGTTTTAACACATCCAAACAAAAATTCATTCTACACGCATCGTCCAGAACCTAACCTGAAAATAGAATTTGTATTTCAAAATTGTAAGCAGTGGATGTATAGCTTCAGAAAGTTATCTACAATTTATTGGCTTTTGCTGATCTTGCTACTACTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGTATAGCACAGTCTTTCTATACTGAAATATTACCGTCTTATTATTATTGCTAGGTGCTTCTGAAAATGATTCCTGTAACATCTTTCCTACTCCTAAGTTTAATTATTTAGGATCTGTCCAGGAAAAGTAATTTTAATATAATACTAGATTACTCGTGAAATTCTTGAATTATTTATCCTTTTTGAAGAAAGTACTGCGCACTGCGCAAATTATATGCCATGGAAGGATGCTTTTTTTCTTTCTTTATCTAAAAATTATACTCGTATAGTGCAACCTGTTTCAGCATTTGCTTAGAAGATACTAAATTTCTATATTTAGGCTACGCCTAATGATTTAACATGTTACAAATACAACACAAGATCTGAGTTCAAATTATTGCAACATCCGTTAAGTTTGTAGACGTTGAATGTTGTTATATGACATACTTCTACGTCCAGAAAATATTGAGTTACTTCAGGAGATTCAATTATGAAAATTTATGGTGAAATTTGTCCCAAATGAATTGACAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGTAAATCGCCTCCAGTTTTATATGATATTTTAATTGGTGAGAAGTACTTTTCATTGTTTTAAAAGCATTTTCTAGAATTTTCAGTCTTTAGTCGACTCGATAGAAAGACCTTTACAAGTAATTAATTAGCATTATGCTAAATATGCATGTAGAAAAAGTTTTTTACTTCAAAATACTTGAAATAAGTGATTTTACCTCAATCATCTTGGTTAAACATGTAGATCACCGCGAAATGGGTGAGCTTCAATCGAAAGAGAAAAGTACTTTTAATCGATATGAAAAAAATTGTTATTAGCGACATGGAAAGCATTCCTAACTTGTCAATGCCTCCCTTAGTTGGTAACATTGGCGTAGTCTAGTGTTTGATTGAGAATGAGGTGTGATTTTGTAATGACGCATGCAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

mRNA sequence

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

Coding sequence (CDS)

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Homology
[Close]
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match: FB331_ARATH (Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2)

HSP 1 Score: 392.9 bits (1008), Expect = 3.7e-108
Identity = 189/343 (55.10%), Postives = 253/343 (73.76%), Query Frame = 1 

Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   K +R     I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRG----IRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+S G C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match: FB332_ARATH (Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 384.0 bits (985), Expect = 1.7e-105
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 1 

Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+S G C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0A0KD88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 1.4e-191
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0R0FUX3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 215/309 (69.58%), Postives = 252/309 (81.55%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AKFLDG+SL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKFLDGKSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF  DSSV +L+ERL    KI   ++ +  L S GCCVL NVKTGIWIADLQLVRC
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL EG+Q+GSW+YQ++GS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           KDSSTS + D KSW G   DWQPKAMI  +AVAVNT LQ+NEG+HVKY AM+AGA+GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

Query: 345 SIRISQQLL 353
           SIRISQQLL
Sbjct: 319 SIRISQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0B2Q811_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 214/309 (69.26%), Postives = 251/309 (81.23%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AK LDG+SL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKSLDGKSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF  DSSV +L+ERL    KI   ++ +  L S GCCVL NVKTGIWIADLQLVRC
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL EG+Q+GSW+YQ++GS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           KDSSTS + D KSW G   DWQPKAMI  +AVAVNT LQ+NEG+HVKY AM+AGA+GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

Query: 345 SIRISQQLL 353
           SIRISQQLL
Sbjct: 319 SIRISQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: D7UCQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.9e-120
Identity = 208/311 (66.88%), Postives = 251/311 (80.71%), Query Frame = 1 

Query: 43  MVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMML 102
           M KRMRR+ K I  C+SP + F                WY+ D+WTE+AK LDG+SL+ML
Sbjct: 1   MGKRMRRE-KSICCCNSPLAGF---------------SWYEEDIWTEIAKHLDGKSLVML 60

Query: 103 AATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHL 162
              ++WF+ L+MEDSIWK+ CLRDLQ+P PQHT   WIKLY SAFDGSHS++FRQ+EKH+
Sbjct: 61  GTKNKWFHCLIMEDSIWKFACLRDLQLPEPQHTFLNWIKLYASAFDGSHSFMFRQREKHI 120

Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLV 222
           DWMRIGAFF+DS + LL+E+L   +KIP+ ++   TLES G C+L+N+KTGIWIADLQLV
Sbjct: 121 DWMRIGAFFLDSPISLLAEKLSCPLKIPQGENLGKTLESCGFCILNNIKTGIWIADLQLV 180

Query: 223 RCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVK 282
           RCPVCDLNTCDGTMQTLDARHIELFL+EGY+DGSWEY+I+GSHDI+K  + AS  IFD+K
Sbjct: 181 RCPVCDLNTCDGTMQTLDARHIELFLSEGYRDGSWEYRIIGSHDIKKHADGASAGIFDIK 240

Query: 283 HLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGE 342
           HL DSSTS I +LKSW G   DWQPKAMITL+AVA+NT LQ+NEG+HVKYQAMKAG +GE
Sbjct: 241 HLNDSSTSEIFNLKSWVGKPNDWQPKAMITLHAVAINTNLQENEGLHVKYQAMKAGPDGE 295

Query: 343 VVSIRISQQLL 353
           VVS+RISQQLL
Sbjct: 301 VVSLRISQQLL 295

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: M5X6Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-119
Identity = 216/319 (67.71%), Postives = 254/319 (79.62%), Query Frame = 1 

Query: 35  VVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFL 94
           V   +P  M KRMRR  K I SCSSPR T         +SA S+ CWY+ DVWTE+AK+L
Sbjct: 9   VTQPQPPQMQKRMRRT-KTICSCSSPRFT--------DNSAGSAFCWYEEDVWTEIAKYL 68

Query: 95  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYI 154
           DG+SL+MLA T  WF+ L+ME SIWKY CLRDLQVPAP H AF W  LYVSAFDGSHSY+
Sbjct: 69  DGKSLVMLATTCCWFHGLIMEGSIWKYACLRDLQVPAPLHVAFNWRNLYVSAFDGSHSYM 128

Query: 155 FRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGI 214
           FRQ+EKH+DWMRIGAF ++SS  LL+ERL +  K+P++D+    LE+ G CVL NVK GI
Sbjct: 129 FRQKEKHIDWMRIGAFSVESSEALLTERLRNPTKLPEEDTMQKMLEACGYCVLDNVKAGI 188

Query: 215 WIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESA 274
           WIADLQLVRCPVC+LNTCDGTMQTLDARHIELFL+EGYQ+GSWEY+ +GSHD++K  + A
Sbjct: 189 WIADLQLVRCPVCELNTCDGTMQTLDARHIELFLSEGYQNGSWEYEHIGSHDVKKHVDGA 248

Query: 275 SGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQA 334
           SGAIFD+KHL DS TS + +LKSW G   DWQPKA+ITL++VAVNT LQ NEG+ VKYQ 
Sbjct: 249 SGAIFDLKHLNDSPTS-VFNLKSWVGKPNDWQPKAIITLHSVAVNTNLQKNEGLQVKYQV 308

Query: 335 MKAGANGEVVSIRISQQLL 353
           M+AGA GEVVSIRISQQLL
Sbjct: 309 MRAGAGGEVVSIRISQQLL 317

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT5G36000.1 (AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1))

HSP 1 Score: 384.0 bits (985), Expect = 9.7e-107
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 1 

Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+S G C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT3G61730.1 (AT3G61730.1 reduced male fertility)

HSP 1 Score: 375.6 bits (963), Expect = 3.5e-104
Identity = 185/343 (53.94%), Postives = 248/343 (72.30%), Query Frame = 1 

Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   K +R     I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRG----IRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+S G C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT3G62500.1 (AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1))

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-41
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1 

Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVR 222
           DWM IGAF +DS   LL+E L  ++K+PK+ + +  L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKY---------------LQLVR 237

Query: 223 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKH 282
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 283 LKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK 331
            K+SS+SGIL+LKSWTG     QPKA+I  +AVAV+T L++NE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|449445830|ref|XP_004140675.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis sativus])

HSP 1 Score: 676.8 bits (1745), Expect = 2.1e-191
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|659120074|ref|XP_008459999.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 633.3 bits (1632), Expect = 2.6e-178
Identity = 312/334 (93.41%), Postives = 321/334 (96.11%), Query Frame = 1 

Query: 23  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSS 82
           MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  ACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           +CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN 322
           QI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTGSR DWQPKAMITL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|747045396|ref|XP_011093782.1| (PREDICTED: probable F-box protein At3g61730 [Sesamum indicum])

HSP 1 Score: 450.7 bits (1158), Expect = 2.4e-123
Identity = 212/297 (71.38%), Postives = 245/297 (82.49%), Query Frame = 1 

Query: 57  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 116
           C SPRS++LT HS  S        WY+ DVWTE+AKFLDGRSL+MLA T +WF R++MED
Sbjct: 4   CVSPRSSYLTPHSIFS--------WYEEDVWTEIAKFLDGRSLVMLAVTCKWFNRIMMED 63

Query: 117 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 176
           S+WKY CLRDLQVP P   AFKW KLY +AFDGSH+Y+FRQQEKH+DWMRIGAF  DS  
Sbjct: 64  SVWKYACLRDLQVPDPGKVAFKWSKLYATAFDGSHAYMFRQQEKHIDWMRIGAFLFDSHA 123

Query: 177 VLLSERLGSQVKIPKQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 236
            LL+E L + ++IPK+ +T+N L+  GCC+L+N++TGIWIADLQLVRCPVCDL+TCDGTM
Sbjct: 124 ALLTENLIAPLRIPKEGATENMLQLKGCCLLNNIRTGIWIADLQLVRCPVCDLDTCDGTM 183

Query: 237 QTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLK 296
           QTLDARHIELFLNEGY DGSW+Y  LGSHDI+K  E ASG IFDV+HLKD STS I DLK
Sbjct: 184 QTLDARHIELFLNEGYHDGSWDYDTLGSHDIKKQAEGASGGIFDVEHLKDQSTSDIFDLK 243

Query: 297 SWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           SW G R DWQPKAMITL+AVAVNT LQDNEG+ VKY AM+AG +GEVVSIRISQQLL
Sbjct: 244 SWVGKRNDWQPKAMITLHAVAVNTNLQDNEGLQVKYHAMRAGKDGEVVSIRISQQLL 292

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|1009142532|ref|XP_015888772.1| (PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba])

HSP 1 Score: 450.7 bits (1158), Expect = 2.4e-123
Identity = 218/309 (70.55%), Postives = 258/309 (83.50%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           +R+RR  K I SC+SP STFL AHS+          WY+ DVWTE+ KFLDGRSL+MLAA
Sbjct: 19  RRLRRT-KTICSCNSPSSTFLNAHSNFF--------WYEIDVWTEITKFLDGRSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF+ L+ME+SIWKYVCLRDLQVPAP+  AF WI LY SAFDGSHSY+FRQ EKH+DW
Sbjct: 79  TSRWFHGLIMEESIWKYVCLRDLQVPAPRSVAFNWINLYASAFDGSHSYMFRQPEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF +DSSV LL+E+L + VKI  +D+ +N L+S G C+L+NVK GIWIADLQLVRC
Sbjct: 139 MRIGAFSIDSSVALLTEKLTAPVKISYEDNIENMLQSHGYCLLNNVKNGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL+EGY DGSWEY+++GSHDI+K  + ASGAIFDV +L
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLSEGYLDGSWEYELIGSHDIKKHADGASGAIFDVNYL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           K +STS + +L SW G +TDWQPKA+ITL+AVAVNT LQ NEG+HVKY AM+AG +GEVV
Sbjct: 259 KATSTSAVFNLSSWIGKQTDWQPKAVITLHAVAVNTNLQKNEGLHVKYHAMRAGDDGEVV 318

Query: 345 SIRISQQLL 353
           SIR+SQQLL
Sbjct: 319 SIRVSQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|502156898|ref|XP_004510686.1| (PREDICTED: probable F-box protein At3g61730 [Cicer arietinum])

HSP 1 Score: 446.4 bits (1147), Expect = 4.5e-122
Identity = 214/309 (69.26%), Postives = 252/309 (81.55%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W+D D+WTE+AKFLDG+SL+MLA 
Sbjct: 21  KRIRRT-KTICSCNSPRPPFLSAHSTFS--------WFDEDIWTEIAKFLDGKSLIMLAT 80

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           T++WF R +M+D IWK+V LRDLQVP+PQ  AFKW KLY SAFDGSHSY FRQQEKH+DW
Sbjct: 81  TNKWFRRAIMDDGIWKFVSLRDLQVPSPQRVAFKWSKLYTSAFDGSHSYKFRQQEKHIDW 140

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF+ DSSV LL+ERL    ++ K++S +  L S GCC L N+K GIWIADLQLVRC
Sbjct: 141 MRIGAFYFDSSVALLTERLNFPGELRKEESMEKMLRSHGCCFLDNIKPGIWIADLQLVRC 200

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL E YQ+GSWEY+++GSHDI+K  + A+GAIFDVKHL
Sbjct: 201 PVCDLNTCDGTMQTLDARHIELFLCEDYQNGSWEYELVGSHDIKKRADGAAGAIFDVKHL 260

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           ++SSTS + D KSW G   DWQPKAMI  +AVAVNT LQDNEG+HVKYQAM+AG NGEVV
Sbjct: 261 ENSSTSAVFDYKSWIGKHNDWQPKAMIAFHAVAVNTNLQDNEGLHVKYQAMRAGTNGEVV 320

Query: 345 SIRISQQLL 353
           S+RISQQLL
Sbjct: 321 SMRISQQLL 320

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB331_ARATH3.7e-10855.10Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2[more]
FB332_ARATH1.7e-10557.76Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2[more]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD88_CUCSA1.4e-19194.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1[more]
A0A0R0FUX3_SOYBN2.0e-12169.58Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1[more]
A0A0B2Q811_GLYSO1.7e-12069.26Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1[more]
D7UCQ1_VITVI3.9e-12066.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=... [more]
M5X6Y2_PRUPE1.5e-11967.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G36000.19.7e-10757.76 BEST Arabidopsis thaliana protein match is: reduced male fertility (... [more]
AT3G61730.13.5e-10453.94 reduced male fertility[more]
AT3G62500.17.1e-4151.79 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (T... [more]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445830|ref|XP_004140675.1|2.1e-19194.08PREDICTED: probable F-box protein At3g61730 [Cucumis sativus][more]
gi|659120074|ref|XP_008459999.1|2.6e-17893.41PREDICTED: probable F-box protein At3g61730 [Cucumis melo][more]
gi|747045396|ref|XP_011093782.1|2.4e-12371.38PREDICTED: probable F-box protein At3g61730 [Sesamum indicum][more]
gi|1009142532|ref|XP_015888772.1|2.4e-12370.55PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba][more]
gi|502156898|ref|XP_004510686.1|4.5e-12269.26PREDICTED: probable F-box protein At3g61730 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04600.1Cp4.1LG12g04600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 85..145
score: 1.42
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 85..135
score: 3.
NoneNo IPR availablePANTHERPTHR15537FAMILY NOT NAMEDcoord: 54..329
score: 2.4E
NoneNo IPR availablePANTHERPTHR15537:SF3SUBFAMILY NOT NAMEDcoord: 54..329
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04600CmaCh17G005450Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04600CmoCh17G005230Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04600Bhi12G002061Wax gourdcpewgoB0184
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB898
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB901
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB906
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB836
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB838
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB842
Cp4.1LG12g04600Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g04600Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g04600Watermelon (97103) v1cpewmB155
Cp4.1LG12g04600Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g04600Cucumber (Gy14) v2cgybcpeB732
Cp4.1LG12g04600Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g04600Silver-seed gourdcarcpeB0117
Cp4.1LG12g04600Silver-seed gourdcarcpeB0119
Cp4.1LG12g04600Silver-seed gourdcarcpeB0120
Cp4.1LG12g04600Wax gourdcpewgoB0174
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB163
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB166
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB172