Cp4.1LG12g04600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionreduced male fertility
LocationCp4.1LG12 : 4320596 .. 4324788 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCCATCCTGATAGACGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCGTAGAAATGTGTCTGCCTGTGGAGGTAAATGCCTATGTGTTTTTTAGCATCGTGATAGTGAGGAAATTAAAATTTTATTTTCTAGAAGTGATTTGAATATCTTAGTTCAGAAATTTAAATGTGAAGTTATTTCCCGACTTTTAGACTCTTTGAGCTAGATTGTGAAGTTGCATTAGTTTAGTACTGCCAAGGACTTGGAAGTAGTAAGAAATAAACAATTCGAGTTGTTTCTGTAAGATTCCGAAGCTCAAAGTGAACGTCTGCAGAGTTAAATCTACTCAGCATAAACTTGTTCGTTTTCTCCATCGGGAGAAAACGATGGAGAAGAAACGTTTATTTTTGTGATTTTAGAATTTGCAGACTGAATGTGACAATCGTTGTTGGAAACCACTAGGCGTTGATGAACACTTTCTGGAGCTCTATAAAGTTAATCGTAAGTACAGTTAGTAATATAAGTAGGATGCCAAATCTTCAGTATAGTTTGAAGTGATTTTTTTCACAAGGATCGAAGCAGTTACAGGACTTACATTTTTTACTTTTTTTATCTAAACACTTTCTGGAGCTCTATCTAAAGCTTGTTCAACACTAACATACTTTTTTATCACATAAAGTATTCCGAGTCTCCTAGTTTTCTTATTAACTTCATCTTTTACTTTTCTATGTATTGTTTCTTGGTTCTACTTATAAGATTTCAAACGTGATTGTTCTATCTTTTTACATATTCAATTTTAAACCAGTTATTATTTTCAGTTTTAAGTAATCGGAAGTTCATTTGTTACCATTAGTCTGGCTTAAGTTTGGTAGATCGGGAATAAGATTGATGAATCACGTGAATTAGAAACTGTTTCTATCAGTTTGAATATTTCATCGGAAACAGAGCTAAGGATTAATATGTAATTTAACCTTCCGTATGACAATTTCCGCGAATGAACATGAAAGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGGTAAGGATCGGATTCGAGTTCTTTGAGTTATGTATTCCTGCTCTGGTCAATACGTATTGCGTTTGCTTAACTATTCAATGATCTCTGGTCCAGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTCGACTCCTGTAAGTAATTAGGCGCGGATTGTACTTAAAAGTAAAACTATATGTCAAGGACCTGCTTAGCCACGGGTTCTATCTAATCTTATCATCACATCTTACCTAATAACTAGATATTCAAGCTTTATTCAACCATAACTCAAGTCATTATAGAGGGTGGAGGTAGTATAAACCTACTATCTCGAGATTCCAAGGAATAAACTCCCAAAGCAACTGTACTGCTACTTTCCATCATGTATAAAATAGACATTTAGTGATCCTGATTCCAATATACTAATTGAACTGTAGTTAGCTTCTTTACCACATTGTTTATTATTTATTTATTTATTTTAAATGAAATCAGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGGTATCAAGCTTGCTAAATGTTTTTATCATTTTCTTTCAATGGTTGTCATAACTTGATACTCTATTAACCTTTTCTTAAGTGAATTATATTCTAAATGGACTAATGTGACAGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAGGTATCCCTAGTAACCATTCTGTATCCCACTAAAATGTAGGAACCTCTTTTTATTTCGATTGTTGCAAGATCTTAGCCTGCAGTTGTATCATTTTGGTAATTGGTATGCCATACTGTGTTTAAAAATATTGGGGAATTCATAGGCTTATTTTCTTCCGAATTTCATTGAAAATTAGTTTAATCTTGTTTCCAATACCTTAGGAAAGTGGAAGATACTGGGAGCACATACTCCTAATCAGCTGCTAATCAACCTTAGTTCAGTTTTTTTAGTAAGGGTTTTAACACATCCAAACAAAAATTCATTCTACACGCATCGTCCAGAACCTAACCTGAAAATAGAATTTGTATTTCAAAATTGTAAGCAGTGGATGTATAGCTTCAGAAAGTTATCTACAATTTATTGGCTTTTGCTGATCTTGCTACTACTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGTATAGCACAGTCTTTCTATACTGAAATATTACCGTCTTATTATTATTGCTAGGTGCTTCTGAAAATGATTCCTGTAACATCTTTCCTACTCCTAAGTTTAATTATTTAGGATCTGTCCAGGAAAAGTAATTTTAATATAATACTAGATTACTCGTGAAATTCTTGAATTATTTATCCTTTTTGAAGAAAGTACTGCGCACTGCGCAAATTATATGCCATGGAAGGATGCTTTTTTTCTTTCTTTATCTAAAAATTATACTCGTATAGTGCAACCTGTTTCAGCATTTGCTTAGAAGATACTAAATTTCTATATTTAGGCTACGCCTAATGATTTAACATGTTACAAATACAACACAAGATCTGAGTTCAAATTATTGCAACATCCGTTAAGTTTGTAGACGTTGAATGTTGTTATATGACATACTTCTACGTCCAGAAAATATTGAGTTACTTCAGGAGATTCAATTATGAAAATTTATGGTGAAATTTGTCCCAAATGAATTGACAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGTAAATCGCCTCCAGTTTTATATGATATTTTAATTGGTGAGAAGTACTTTTCATTGTTTTAAAAGCATTTTCTAGAATTTTCAGTCTTTAGTCGACTCGATAGAAAGACCTTTACAAGTAATTAATTAGCATTATGCTAAATATGCATGTAGAAAAAGTTTTTTACTTCAAAATACTTGAAATAAGTGATTTTACCTCAATCATCTTGGTTAAACATGTAGATCACCGCGAAATGGGTGAGCTTCAATCGAAAGAGAAAAGTACTTTTAATCGATATGAAAAAAATTGTTATTAGCGACATGGAAAGCATTCCTAACTTGTCAATGCCTCCCTTAGTTGGTAACATTGGCGTAGTCTAGTGTTTGATTGAGAATGAGGTGTGATTTTGTAATGACGCATGCAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

mRNA sequence

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

Coding sequence (CDS)

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Homology
[Close]
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match: FB331_ARATH (Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2)

HSP 1 Score: 392.9 bits (1008), Expect = 3.7e-108
Identity = 189/343 (55.10%), Postives = 253/343 (73.76%), Query Frame = 1 

Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   K +R     I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRG----IRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+S G C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match: FB332_ARATH (Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 384.0 bits (985), Expect = 1.7e-105
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 1 

Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+S G C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0A0KD88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 1.4e-191
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0R0FUX3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 215/309 (69.58%), Postives = 252/309 (81.55%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AKFLDG+SL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKFLDGKSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF  DSSV +L+ERL    KI   ++ +  L S GCCVL NVKTGIWIADLQLVRC
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL EG+Q+GSW+YQ++GS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           KDSSTS + D KSW G   DWQPKAMI  +AVAVNT LQ+NEG+HVKY AM+AGA+GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

Query: 345 SIRISQQLL 353
           SIRISQQLL
Sbjct: 319 SIRISQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: A0A0B2Q811_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 214/309 (69.26%), Postives = 251/309 (81.23%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W++ D+WTE+AK LDG+SL+MLAA
Sbjct: 19  KRIRRS-KTICSCNSPRPPFLSAHSTFS--------WFEEDIWTEIAKSLDGKSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF R +M+D IWK+VCLRDLQVP P+  AF+W KLY S FDGSHSY+FRQQEKH+DW
Sbjct: 79  TSRWFRRAIMDDGIWKFVCLRDLQVPPPECVAFRWCKLYTSTFDGSHSYMFRQQEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF  DSSV +L+ERL    KI   ++ +  L S GCCVL NVKTGIWIADLQLVRC
Sbjct: 139 MRIGAFSFDSSVAVLAERLILPGKIRNGETMEKMLRSQGCCVLDNVKTGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL EG+Q+GSW+YQ++GS DI+K  + A+GAIFD+KHL
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLCEGFQNGSWDYQLVGSRDIKKRADGAAGAIFDMKHL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           KDSSTS + D KSW G   DWQPKAMI  +AVAVNT LQ+NEG+HVKY AM+AGA+GEVV
Sbjct: 259 KDSSTSAVFDYKSWIGRANDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGADGEVV 318

Query: 345 SIRISQQLL 353
           SIRISQQLL
Sbjct: 319 SIRISQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: D7UCQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.9e-120
Identity = 208/311 (66.88%), Postives = 251/311 (80.71%), Query Frame = 1 

Query: 43  MVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMML 102
           M KRMRR+ K I  C+SP + F                WY+ D+WTE+AK LDG+SL+ML
Sbjct: 1   MGKRMRRE-KSICCCNSPLAGF---------------SWYEEDIWTEIAKHLDGKSLVML 60

Query: 103 AATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHL 162
              ++WF+ L+MEDSIWK+ CLRDLQ+P PQHT   WIKLY SAFDGSHS++FRQ+EKH+
Sbjct: 61  GTKNKWFHCLIMEDSIWKFACLRDLQLPEPQHTFLNWIKLYASAFDGSHSFMFRQREKHI 120

Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLV 222
           DWMRIGAFF+DS + LL+E+L   +KIP+ ++   TLES G C+L+N+KTGIWIADLQLV
Sbjct: 121 DWMRIGAFFLDSPISLLAEKLSCPLKIPQGENLGKTLESCGFCILNNIKTGIWIADLQLV 180

Query: 223 RCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVK 282
           RCPVCDLNTCDGTMQTLDARHIELFL+EGY+DGSWEY+I+GSHDI+K  + AS  IFD+K
Sbjct: 181 RCPVCDLNTCDGTMQTLDARHIELFLSEGYRDGSWEYRIIGSHDIKKHADGASAGIFDIK 240

Query: 283 HLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGE 342
           HL DSSTS I +LKSW G   DWQPKAMITL+AVA+NT LQ+NEG+HVKYQAMKAG +GE
Sbjct: 241 HLNDSSTSEIFNLKSWVGKPNDWQPKAMITLHAVAINTNLQENEGLHVKYQAMKAGPDGE 295

Query: 343 VVSIRISQQLL 353
           VVS+RISQQLL
Sbjct: 301 VVSLRISQQLL 295

[Close]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match: M5X6Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-119
Identity = 216/319 (67.71%), Postives = 254/319 (79.62%), Query Frame = 1 

Query: 35  VVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFL 94
           V   +P  M KRMRR  K I SCSSPR T         +SA S+ CWY+ DVWTE+AK+L
Sbjct: 9   VTQPQPPQMQKRMRRT-KTICSCSSPRFT--------DNSAGSAFCWYEEDVWTEIAKYL 68

Query: 95  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYI 154
           DG+SL+MLA T  WF+ L+ME SIWKY CLRDLQVPAP H AF W  LYVSAFDGSHSY+
Sbjct: 69  DGKSLVMLATTCCWFHGLIMEGSIWKYACLRDLQVPAPLHVAFNWRNLYVSAFDGSHSYM 128

Query: 155 FRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGI 214
           FRQ+EKH+DWMRIGAF ++SS  LL+ERL +  K+P++D+    LE+ G CVL NVK GI
Sbjct: 129 FRQKEKHIDWMRIGAFSVESSEALLTERLRNPTKLPEEDTMQKMLEACGYCVLDNVKAGI 188

Query: 215 WIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESA 274
           WIADLQLVRCPVC+LNTCDGTMQTLDARHIELFL+EGYQ+GSWEY+ +GSHD++K  + A
Sbjct: 189 WIADLQLVRCPVCELNTCDGTMQTLDARHIELFLSEGYQNGSWEYEHIGSHDVKKHVDGA 248

Query: 275 SGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQA 334
           SGAIFD+KHL DS TS + +LKSW G   DWQPKA+ITL++VAVNT LQ NEG+ VKYQ 
Sbjct: 249 SGAIFDLKHLNDSPTS-VFNLKSWVGKPNDWQPKAIITLHSVAVNTNLQKNEGLQVKYQV 308

Query: 335 MKAGANGEVVSIRISQQLL 353
           M+AGA GEVVSIRISQQLL
Sbjct: 309 MRAGAGGEVVSIRISQQLL 317

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT5G36000.1 (AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1))

HSP 1 Score: 384.0 bits (985), Expect = 9.7e-107
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 1 

Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+S G C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT3G61730.1 (AT3G61730.1 reduced male fertility)

HSP 1 Score: 375.6 bits (963), Expect = 3.5e-104
Identity = 185/343 (53.94%), Postives = 248/343 (72.30%), Query Frame = 1 

Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   K +R     I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIVQSSDQKNGKILRG----IRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+S G C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match: AT3G62500.1 (AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1))

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-41
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 1 

Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVR 222
           DWM IGAF +DS   LL+E L  ++K+PK+ + +  L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKY---------------LQLVR 237

Query: 223 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKH 282
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 283 LKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK 331
            K+SS+SGIL+LKSWTG     QPKA+I  +AVAV+T L++NE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|449445830|ref|XP_004140675.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis sativus])

HSP 1 Score: 676.8 bits (1745), Expect = 2.1e-191
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 1 

Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|659120074|ref|XP_008459999.1| (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 633.3 bits (1632), Expect = 2.6e-178
Identity = 312/334 (93.41%), Postives = 321/334 (96.11%), Query Frame = 1 

Query: 23  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSS 82
           MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  ACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           +CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN 322
           QI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTGSR DWQPKAMITL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           TYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|747045396|ref|XP_011093782.1| (PREDICTED: probable F-box protein At3g61730 [Sesamum indicum])

HSP 1 Score: 450.7 bits (1158), Expect = 2.4e-123
Identity = 212/297 (71.38%), Postives = 245/297 (82.49%), Query Frame = 1 

Query: 57  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 116
           C SPRS++LT HS  S        WY+ DVWTE+AKFLDGRSL+MLA T +WF R++MED
Sbjct: 4   CVSPRSSYLTPHSIFS--------WYEEDVWTEIAKFLDGRSLVMLAVTCKWFNRIMMED 63

Query: 117 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 176
           S+WKY CLRDLQVP P   AFKW KLY +AFDGSH+Y+FRQQEKH+DWMRIGAF  DS  
Sbjct: 64  SVWKYACLRDLQVPDPGKVAFKWSKLYATAFDGSHAYMFRQQEKHIDWMRIGAFLFDSHA 123

Query: 177 VLLSERLGSQVKIPKQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 236
            LL+E L + ++IPK+ +T+N L+  GCC+L+N++TGIWIADLQLVRCPVCDL+TCDGTM
Sbjct: 124 ALLTENLIAPLRIPKEGATENMLQLKGCCLLNNIRTGIWIADLQLVRCPVCDLDTCDGTM 183

Query: 237 QTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLK 296
           QTLDARHIELFLNEGY DGSW+Y  LGSHDI+K  E ASG IFDV+HLKD STS I DLK
Sbjct: 184 QTLDARHIELFLNEGYHDGSWDYDTLGSHDIKKQAEGASGGIFDVEHLKDQSTSDIFDLK 243

Query: 297 SWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           SW G R DWQPKAMITL+AVAVNT LQDNEG+ VKY AM+AG +GEVVSIRISQQLL
Sbjct: 244 SWVGKRNDWQPKAMITLHAVAVNTNLQDNEGLQVKYHAMRAGKDGEVVSIRISQQLL 292

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|1009142532|ref|XP_015888772.1| (PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba])

HSP 1 Score: 450.7 bits (1158), Expect = 2.4e-123
Identity = 218/309 (70.55%), Postives = 258/309 (83.50%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           +R+RR  K I SC+SP STFL AHS+          WY+ DVWTE+ KFLDGRSL+MLAA
Sbjct: 19  RRLRRT-KTICSCNSPSSTFLNAHSNFF--------WYEIDVWTEITKFLDGRSLVMLAA 78

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           TSRWF+ L+ME+SIWKYVCLRDLQVPAP+  AF WI LY SAFDGSHSY+FRQ EKH+DW
Sbjct: 79  TSRWFHGLIMEESIWKYVCLRDLQVPAPRSVAFNWINLYASAFDGSHSYMFRQPEKHIDW 138

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF +DSSV LL+E+L + VKI  +D+ +N L+S G C+L+NVK GIWIADLQLVRC
Sbjct: 139 MRIGAFSIDSSVALLTEKLTAPVKISYEDNIENMLQSHGYCLLNNVKNGIWIADLQLVRC 198

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL+EGY DGSWEY+++GSHDI+K  + ASGAIFDV +L
Sbjct: 199 PVCDLNTCDGTMQTLDARHIELFLSEGYLDGSWEYELIGSHDIKKHADGASGAIFDVNYL 258

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           K +STS + +L SW G +TDWQPKA+ITL+AVAVNT LQ NEG+HVKY AM+AG +GEVV
Sbjct: 259 KATSTSAVFNLSSWIGKQTDWQPKAVITLHAVAVNTNLQKNEGLHVKYHAMRAGDDGEVV 318

Query: 345 SIRISQQLL 353
           SIR+SQQLL
Sbjct: 319 SIRVSQQLL 318

[Close]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: gi|502156898|ref|XP_004510686.1| (PREDICTED: probable F-box protein At3g61730 [Cicer arietinum])

HSP 1 Score: 446.4 bits (1147), Expect = 4.5e-122
Identity = 214/309 (69.26%), Postives = 252/309 (81.55%), Query Frame = 1 

Query: 45  KRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAA 104
           KR+RR  K I SC+SPR  FL+AHS+ S        W+D D+WTE+AKFLDG+SL+MLA 
Sbjct: 21  KRIRRT-KTICSCNSPRPPFLSAHSTFS--------WFDEDIWTEIAKFLDGKSLIMLAT 80

Query: 105 TSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDW 164
           T++WF R +M+D IWK+V LRDLQVP+PQ  AFKW KLY SAFDGSHSY FRQQEKH+DW
Sbjct: 81  TNKWFRRAIMDDGIWKFVSLRDLQVPSPQRVAFKWSKLYTSAFDGSHSYKFRQQEKHIDW 140

Query: 165 MRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES-GCCVLHNVKTGIWIADLQLVRC 224
           MRIGAF+ DSSV LL+ERL    ++ K++S +  L S GCC L N+K GIWIADLQLVRC
Sbjct: 141 MRIGAFYFDSSVALLTERLNFPGELRKEESMEKMLRSHGCCFLDNIKPGIWIADLQLVRC 200

Query: 225 PVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHL 284
           PVCDLNTCDGTMQTLDARHIELFL E YQ+GSWEY+++GSHDI+K  + A+GAIFDVKHL
Sbjct: 201 PVCDLNTCDGTMQTLDARHIELFLCEDYQNGSWEYELVGSHDIKKRADGAAGAIFDVKHL 260

Query: 285 KDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVV 344
           ++SSTS + D KSW G   DWQPKAMI  +AVAVNT LQDNEG+HVKYQAM+AG NGEVV
Sbjct: 261 ENSSTSAVFDYKSWIGKHNDWQPKAMIAFHAVAVNTNLQDNEGLHVKYQAMRAGTNGEVV 320

Query: 345 SIRISQQLL 353
           S+RISQQLL
Sbjct: 321 SMRISQQLL 320

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB331_ARATH3.7e-10855.10Probable F-box protein At3g61730 OS=Arabidopsis thaliana GN=RMF PE=1 SV=2[more]
FB332_ARATH1.7e-10557.76Probable F-box protein At5g36000 OS=Arabidopsis thaliana GN=At5g36000 PE=2 SV=2[more]
BLAST of Cp4.1LG12g04600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD88_CUCSA1.4e-19194.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087760 PE=4 SV=1[more]
A0A0R0FUX3_SOYBN2.0e-12169.58Uncharacterized protein OS=Glycine max GN=GLYMA_16G025000 PE=4 SV=1[more]
A0A0B2Q811_GLYSO1.7e-12069.26Putative F-box protein OS=Glycine soja GN=glysoja_013153 PE=4 SV=1[more]
D7UCQ1_VITVI3.9e-12066.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00900 PE=4 SV=... [more]
M5X6Y2_PRUPE1.5e-11967.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb007280mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g04600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G36000.19.7e-10757.76 BEST Arabidopsis thaliana protein match is: reduced male fertility (... [more]
AT3G61730.13.5e-10453.94 reduced male fertility[more]
AT3G62500.17.1e-4151.79 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (T... [more]
BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445830|ref|XP_004140675.1|2.1e-19194.08PREDICTED: probable F-box protein At3g61730 [Cucumis sativus][more]
gi|659120074|ref|XP_008459999.1|2.6e-17893.41PREDICTED: probable F-box protein At3g61730 [Cucumis melo][more]
gi|747045396|ref|XP_011093782.1|2.4e-12371.38PREDICTED: probable F-box protein At3g61730 [Sesamum indicum][more]
gi|1009142532|ref|XP_015888772.1|2.4e-12370.55PREDICTED: probable F-box protein At3g61730 [Ziziphus jujuba][more]
gi|502156898|ref|XP_004510686.1|4.5e-12269.26PREDICTED: probable F-box protein At3g61730 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04600.1Cp4.1LG12g04600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 85..145
score: 1.42
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 85..135
score: 3.
NoneNo IPR availablePANTHERPTHR15537FAMILY NOT NAMEDcoord: 54..329
score: 2.4E
NoneNo IPR availablePANTHERPTHR15537:SF3SUBFAMILY NOT NAMEDcoord: 54..329
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04600CmaCh17G005450Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04600CmoCh17G005230Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04600Bhi12G002061Wax gourdcpewgoB0184
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04600Wax gourdcpewgoB0174
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB163
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB166
Cp4.1LG12g04600Cucurbita pepo (Zucchini)cpecpeB172
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB898
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB901
Cp4.1LG12g04600Cucurbita maxima (Rimu)cmacpeB906
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB836
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB838
Cp4.1LG12g04600Cucurbita moschata (Rifu)cmocpeB842
Cp4.1LG12g04600Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g04600Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g04600Watermelon (97103) v1cpewmB155
Cp4.1LG12g04600Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g04600Cucumber (Gy14) v2cgybcpeB732
Cp4.1LG12g04600Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g04600Silver-seed gourdcarcpeB0117
Cp4.1LG12g04600Silver-seed gourdcarcpeB0119
Cp4.1LG12g04600Silver-seed gourdcarcpeB0120