Cp4.1LG12g04570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGermin-like protein 1
LocationCp4.1LG12 : 3900806 .. 3901720 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATTCAAAGCCAAAGCATATATAGGGTGCTTTGGTGTCTCACCCAAATCTCCAAGTGTTTGTGAAGATCAGCTCATCATGGCCGCCCCACTTTTGTTTCTCACCTTCCTGGCTATAACTTGTTGGGTTGCGTGGGCATCCGAGCCAAGCCCACTTCAAGATTTCTGTGTTGCAGATCTCAACAGTCCTGGTAAGCATTCCAAGTATACATATATATATATATATGCATCTATTTTTGGATGTCAATATTGATGATGCTTGTTTCATTGTGAGACAGTGAAAGTGAATGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAAGACTTCTTCTGGAGCGGATTGAATGTGGCAGCCGCCGTAAACAACCCGGTGGGATCCCAAGCAACTCCTGTCAGTGTTGCCCAAATCCCAGGGCTCAACACTCTTGGCATCTCCCTCGTTCGCATTGACTTCGCCCCACATGGCATCAACCCTCCCCACACGCACCCTCGTGCCACCGAAATCTTGACAGTCCTCGAAGGCACGCTCCTGGTCGGCTTCGTCACCTCCATCCCGGAAAACCGTCTCATAACCAAGACCATGAACAAGGGCGATGTGTTCGTGTTTCCTGTCGGTCTCATTCACTTCCAACAGAATATCGGGAATGGCTCTGCAGTCGCCCTTGCAGCTTTGAGCAGCCAAAACCCAGGTGTTATTCTCATTGCAAATGCAATTTTTGGATCAAACCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATCACCAACATTCAGGCTAAGTTTTAGACAGTGTTAAGATTTCATTTTGGGGTGGGGCGTGCTTTGTACTGACTGATCTTCACATATATATATATATATATATACACTTTTATTGATTTAGAAGTGAT

mRNA sequence

TTAATTCAAAGCCAAAGCATATATAGGGTGCTTTGGTGTCTCACCCAAATCTCCAAGTGTTTGTGAAGATCAGCTCATCATGGCCGCCCCACTTTTGTTTCTCACCTTCCTGGCTATAACTTGTTGGGTTGCGTGGGCATCCGAGCCAAGCCCACTTCAAGATTTCTGTGTTGCAGATCTCAACAGTCCTGTGAAAGTGAATGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAAGACTTCTTCTGGAGCGGATTGAATGTGGCAGCCGCCGTAAACAACCCGGTGGGATCCCAAGCAACTCCTGTCAGTGTTGCCCAAATCCCAGGGCTCAACACTCTTGGCATCTCCCTCGTTCGCATTGACTTCGCCCCACATGGCATCAACCCTCCCCACACGCACCCTCGTGCCACCGAAATCTTGACAGTCCTCGAAGGCACGCTCCTGGTCGGCTTCGTCACCTCCATCCCGGAAAACCGTCTCATAACCAAGACCATGAACAAGGGCGATGTGTTCGTGTTTCCTGTCGGTCTCATTCACTTCCAACAGAATATCGGGAATGGCTCTGCAGTCGCCCTTGCAGCTTTGAGCAGCCAAAACCCAGGTGTTATTCTCATTGCAAATGCAATTTTTGGATCAAACCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATCACCAACATTCAGGCTAAGTTTTAGACAGTGTTAAGATTTCATTTTGGGGTGGGGCGTGCTTTGTACTGACTGATCTTCACATATATATATATATATATATACACTTTTATTGATTTAGAAGTGAT

Coding sequence (CDS)

ATGGCCGCCCCACTTTTGTTTCTCACCTTCCTGGCTATAACTTGTTGGGTTGCGTGGGCATCCGAGCCAAGCCCACTTCAAGATTTCTGTGTTGCAGATCTCAACAGTCCTGTGAAAGTGAATGGCCTAGTTTGCAAGGATCCCAAGCTTGTGGAAGCCAAAGACTTCTTCTGGAGCGGATTGAATGTGGCAGCCGCCGTAAACAACCCGGTGGGATCCCAAGCAACTCCTGTCAGTGTTGCCCAAATCCCAGGGCTCAACACTCTTGGCATCTCCCTCGTTCGCATTGACTTCGCCCCACATGGCATCAACCCTCCCCACACGCACCCTCGTGCCACCGAAATCTTGACAGTCCTCGAAGGCACGCTCCTGGTCGGCTTCGTCACCTCCATCCCGGAAAACCGTCTCATAACCAAGACCATGAACAAGGGCGATGTGTTCGTGTTTCCTGTCGGTCTCATTCACTTCCAACAGAATATCGGGAATGGCTCTGCAGTCGCCCTTGCAGCTTTGAGCAGCCAAAACCCAGGTGTTATTCTCATTGCAAATGCAATTTTTGGATCAAACCCGGACATCTCCACCGATATCCTTGCAAAGGCCTTCCAAACCGATCCCGCTATTATCACCAACATTCAGGCTAAGTTTTAG

Protein sequence

MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSGLNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF
Homology
[Close]
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72
Identity = 143/213 (67.14%), Postives = 163/213 (76.53%), Query Frame = 1 

Query: 5   LLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG-LNV 64
           LL    L +  W A AS+PSPLQDFCVADLNSPV+VNG VCK+P    A DFF +  L+ 
Sbjct: 9   LLVAALLGLASWKAIASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDK 68

Query: 65  AAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTL 124
               NN VGS  T V+V Q+PGLNTLGIS+ R+DFAP G+NPPHTHPRATEI TVLEGTL
Sbjct: 69  PRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTL 128

Query: 125 LVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIG-NGSAVALAALSSQNPGVILIA 184
            VGFVTS P+NRL++K +NKGDVFVFP GLIHFQ N   +  AVA+AALSSQNPGVI IA
Sbjct: 129 YVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIA 188

Query: 185 NAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           NA+FGSNP IS DIL KAFQ D  II  +QA+F
Sbjct: 189 NAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221

[Close]
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.4e-72
Identity = 140/216 (64.81%), Postives = 165/216 (76.39%), Query Frame = 1 

Query: 1   MAAPLLFL-TFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWS 60
           MA+   FL   LA++   A+AS+PS LQDFCVAD  S V VNG  CKDP  +  +DFF+S
Sbjct: 1   MASTWFFLLALLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFS 60

Query: 61  GLNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVL 120
           GL++A   +N  GS  T V+VAQI GLNTLGISL R+D+AP+G+NPPH HPRATEILT+L
Sbjct: 61  GLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTIL 120

Query: 121 EGTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVI 180
           EG+L VGFVTS PEN+L TK +NKGDVFVFP GLIHFQ N G    +ALAALSSQNPGVI
Sbjct: 121 EGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVI 180

Query: 181 LIANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
            IANA+FGS P IS DILAKAFQ +  I+  IQA+F
Sbjct: 181 TIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216

[Close]
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71
Identity = 133/196 (67.86%), Postives = 156/196 (79.59%), Query Frame = 1 

Query: 20  ASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSGLNVAAAVNNPVGSQATPVS 79
           AS+PS LQD CVAD  S V+VNG+ CKD + V A+DFF+SGL++A    N  GS  T V+
Sbjct: 28  ASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVN 87

Query: 80  VAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTLLVGFVTSIPENRLITK 139
           VAQ+PGLNTLGISL RID+A HG+NPPHTHPRATEILTVLEG+L VGFVTS PEN+L TK
Sbjct: 88  VAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTK 147

Query: 140 TMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIANAIFGSNPDISTDILAK 199
            +NKGDVFVFP GL+HFQ N G   AVA+ ALSSQNPGVI +ANA+FGS P I+ DILAK
Sbjct: 148 VINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAK 207

Query: 200 AFQTDPAIITNIQAKF 216
           AFQ +  ++  IQAKF
Sbjct: 208 AFQVEKTVVDQIQAKF 223

[Close]
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.9e-71
Identity = 140/212 (66.04%), Postives = 161/212 (75.94%), Query Frame = 1 

Query: 5   LLFLTFLAITC-WVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSGLNV 64
           L  +  LA+ C   A AS+P  LQDFCV D  S V+VNG  CKD K V A DFF+SGL++
Sbjct: 12  LAVVALLALWCSHGAIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHM 71

Query: 65  AAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTL 124
           A    N  GS  T V+VAQIPGLNT+G+SLVRID+AP+G+NPPHTHPRATEI TVLEG+L
Sbjct: 72  AGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSL 131

Query: 125 LVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIAN 184
            VGFV S PEN+L TK +NKGDVFVFP GL+HFQ N G  +AVALAALSSQNPGVI + N
Sbjct: 132 YVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGN 191

Query: 185 AIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           A+FGS P IS DILAKAFQ D  II  IQA+F
Sbjct: 192 AVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223

[Close]
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-69
Identity = 137/213 (64.32%), Postives = 162/213 (76.06%), Query Frame = 1 

Query: 5   LLFLTFLAITCWVAWASEPSPLQDFCVADLNSP--VKVNGLVCKDPKLVEAKDFFWSGLN 64
           L  L+ LA+T  +A AS+PS LQDFCV+   S   V VNG  CKDPKLV A DFF+SGL 
Sbjct: 9   LAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68

Query: 65  VAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGT 124
            A  + +PVGS  T V+V  + GLNTLGISLVRID+A +G NPPHTHPRATEIL V +GT
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGT 128

Query: 125 LLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIA 184
           LLVGFVTS P+NRL +K +N+GDVFVFP GLIHFQ NIG   AVA AALSSQNPGVI IA
Sbjct: 129 LLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 185 NAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           N +FG+NP I+  ILAKAFQ +P ++ ++Q KF
Sbjct: 189 NTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match: A0A0A0KIX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-92
Identity = 176/215 (81.86%), Postives = 189/215 (87.91%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MA+ L FLTFLAITC +A AS+PSPLQDFCVAD NSPVKVNG+VCKDP  VEAKDF  SG
Sbjct: 1   MASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           LNVA   NN VGS  TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVLE
Sbjct: 61  LNVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS PENRLITKT+NKGDVFVFP+GLIHFQQNIG G AVA+AALSSQNPGVI 
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           IANA+FGS PDIST+ILAKAFQTD AII NIQ+KF
Sbjct: 181 IANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match: A0A0A0KKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.6e-92
Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MAA   FLTF A+TC +A AS+PSPLQDFCVAD NSPVKVNG VCKDP +VEAKDFF SG
Sbjct: 1   MAASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           LNVA   NNPVGS  TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVLE
Sbjct: 61  LNVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS  ENRLITKT+NKGDVFVFPVGL+HFQQNIG G AVA+AALSSQNPGVI 
Sbjct: 121 GTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           IANA+FGS PDI T+ILAKAFQTD AII NIQ+KF
Sbjct: 181 IANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match: A0A0A0KIB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88
Identity = 171/216 (79.17%), Postives = 188/216 (87.04%), Query Frame = 1 

Query: 1   MAAPLLFLTF-LAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWS 60
           MA+ LLF  F L I+  +++AS+PSPLQDFCVAD NSPVKVNGLVCK+P LVEAKDFF+S
Sbjct: 1   MASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFS 60

Query: 61  GLNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVL 120
           GL+VA   N P GSQ TPV+V QIPGLNTLGISL RID+AP GIN PHTHPRATEILTVL
Sbjct: 61  GLHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVI 180
           EG LLVGF+TS PENRLITKT++KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGVI
Sbjct: 121 EGKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVI 180

Query: 181 LIANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
            IANA+FGS PDI TDILAKAFQTDPA IT IQAKF
Sbjct: 181 TIANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

[Close]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match: A0A0A0KKW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525540 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.9e-85
Identity = 157/215 (73.02%), Postives = 183/215 (85.12%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           ++  +LFL+FLA+TC +  AS+PSPLQDFCVAD N+PVK+NG+VCKDPKLVEAKDFF SG
Sbjct: 3   ISTQVLFLSFLALTCSIGLASDPSPLQDFCVADPNNPVKLNGIVCKDPKLVEAKDFFRSG 62

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           L+V    NN  GSQ TP S+ QIPGLNTLGISL R+DFAP+ I  PHTHPRATEILT+LE
Sbjct: 63  LHVPGDTNNSAGSQITPASIVQIPGLNTLGISLARLDFAPNSIVTPHTHPRATEILTLLE 122

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS PENRLITKT+NKGDVFVFP+GLIHF QNI +  AVA+ A SSQNPG++ 
Sbjct: 123 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFHQNIAHRPAVAIVAFSSQNPGIVT 182

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           I N++FGS PDI T+ILAKAFQT+PAII NIQ+KF
Sbjct: 183 IENSVFGSKPDIPTNILAKAFQTNPAIIANIQSKF 217

[Close]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match: M5X6A4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026076mg PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.6e-81
Identity = 152/215 (70.70%), Postives = 178/215 (82.79%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MA+  L L FLAITC +A AS+PS LQDFCVAD  + V VNG VCKD KLV+A DFF+SG
Sbjct: 1   MASQFLLLAFLAITCAIASASDPSSLQDFCVADSKASVLVNGFVCKDSKLVDANDFFFSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           L++A   +N VGS+ TPV+  QIPGLNTLGIS+VRID+AP GINPPHTHPRATE+LTVLE
Sbjct: 61  LHLAGNTSNAVGSRVTPVNAVQIPGLNTLGISIVRIDYAPWGINPPHTHPRATEVLTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           G+L VGFVTS PEN LITK + KGDVFVFPVGL+HFQQN+G G+AVA+AAL+SQNPGVI 
Sbjct: 121 GSLKVGFVTSNPENHLITKVLRKGDVFVFPVGLVHFQQNVGYGNAVAIAALNSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           +ANA+FGS PDIS D+LAKAFQ D   + N Q+KF
Sbjct: 181 VANAVFGSKPDISADVLAKAFQVDKNRVYNFQSKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-70
Identity = 137/213 (64.32%), Postives = 162/213 (76.06%), Query Frame = 1 

Query: 5   LLFLTFLAITCWVAWASEPSPLQDFCVADLNSP--VKVNGLVCKDPKLVEAKDFFWSGLN 64
           L  L+ LA+T  +A AS+PS LQDFCV+   S   V VNG  CKDPKLV A DFF+SGL 
Sbjct: 9   LAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68

Query: 65  VAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGT 124
            A  + +PVGS  T V+V  + GLNTLGISLVRID+A +G NPPHTHPRATEIL V +GT
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGT 128

Query: 125 LLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIA 184
           LLVGFVTS P+NRL +K +N+GDVFVFP GLIHFQ NIG   AVA AALSSQNPGVI IA
Sbjct: 129 LLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 185 NAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           N +FG+NP I+  ILAKAFQ +P ++ ++Q KF
Sbjct: 189 NTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match: AT5G38930.1 (AT5G38930.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 4.9e-69
Identity = 136/213 (63.85%), Postives = 159/213 (74.65%), Query Frame = 1 

Query: 5   LLFLTFLAITCWVAWASEPSPLQDFCVADLNSP--VKVNGLVCKDPKLVEAKDFFWSGLN 64
           L  L+ LA+T  +  AS+PS LQDFCV+  +S   V VNG  CKDPKLV A DFF+ GL 
Sbjct: 9   LAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQ 68

Query: 65  VAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGT 124
            A  + +PVGS  T V+V  + GLNTLGISLVRID+A  G NPPHTHPRATEIL V  GT
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGT 128

Query: 125 LLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIA 184
           LLVGFVTS P+NRL TK +N+GDVFVFP GLIHFQ NIG   AVA AALSSQNPGVI IA
Sbjct: 129 LLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 185 NAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
             +FG+NP I+ +ILAKAFQ DP ++ ++Q KF
Sbjct: 189 PTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221

[Close]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 4.9e-69
Identity = 135/208 (64.90%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 12  AITCWVAWASEPSPLQDFCVADLNSPVK---VNGLVCKDPKLVEAKDFFWSGLNVAAAV- 71
           A T   A AS+PSPLQDFC+  +N+P     VNG  CKDPKLV A DF++SGL+ A    
Sbjct: 14  ASTLPFAIASDPSPLQDFCIG-VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTE 73

Query: 72  NNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTLLVGF 131
           ++PVGS  T V+V QIPGLNTLGISLVRID+  +G NPPHTHPRATEIL V EGTL VGF
Sbjct: 74  SSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGF 133

Query: 132 VTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIANAIFG 191
            +S PENRL  KT+NKGDVFVFP GLIHFQ NIG   AVA A+LSSQNPGVI+I N +FG
Sbjct: 134 FSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFG 193

Query: 192 SNPDISTDILAKAFQTDPAIITNIQAKF 216
           S P I  ++LAKAFQ DP +I  +Q KF
Sbjct: 194 SKPPIDPNVLAKAFQLDPKVIIQLQKKF 220

[Close]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match: AT5G39110.1 (AT5G39110.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 257.3 bits (656), Expect = 8.4e-69
Identity = 133/214 (62.15%), Postives = 161/214 (75.23%), Query Frame = 1 

Query: 5   LLFLTFLAITCWVAWASEPSPLQDFCVA--DLNSPVKVNGLVCKDPKLVEAKDFFWSGLN 64
           L+ +T  A+    A A++PSPLQDFCVA  DL + V VNG  CKDPK  +A+DFF+SGLN
Sbjct: 7   LILITLSALVISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLN 66

Query: 65  VAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGT 124
            A   NN V S  T V+V QIPGLNTLGISLVRID+AP+G NPPHTHPRATEIL ++EGT
Sbjct: 67  QAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGT 126

Query: 125 LLVGFVTSIPE-NRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILI 184
           L VGFV+S  + NRL  K +N GDVFVFP+G+IHFQ NIG   AVA A LSSQN GVI I
Sbjct: 127 LYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITI 186

Query: 185 ANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           A+ +FGS P I+ DILA+AFQ D  ++ +++AKF
Sbjct: 187 ADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220

[Close]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match: AT5G39190.1 (AT5G39190.1 germin-like protein 2)

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-67
Identity = 128/198 (64.65%), Postives = 152/198 (76.77%), Query Frame = 1 

Query: 20  ASEPSPLQDFCVA-DLNSPVKVNGLVCKDPKLVEAKDFFWSGLNVAAAVNNPVGSQATPV 79
           A +PSPLQDFCVA D    V VNG  CKDPK V+AKDFF+SGLNV    NN VGS  T V
Sbjct: 22  AYDPSPLQDFCVAIDDLKGVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTV 81

Query: 80  SVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLEGTLLVGFVTSIPE-NRLI 139
           +V QIPGLNT+GISLVRID+APHG NPPHTHPR +EIL ++EGTL VGFV+S  + NRL 
Sbjct: 82  NVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLF 141

Query: 140 TKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVILIANAIFGSNPDISTDIL 199
            K ++ GDVFVFP+G+IHFQ N+G   AVA A LSSQN GVI IAN +FGSNP I  ++L
Sbjct: 142 AKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELL 201

Query: 200 AKAFQTDPAIITNIQAKF 216
           A+AFQ D +++  +QAKF
Sbjct: 202 ARAFQLDASVVKELQAKF 219

[Close]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match: gi|449433678|ref|XP_004134624.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.7e-92
Identity = 176/215 (81.86%), Postives = 189/215 (87.91%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MA+ L FLTFLAITC +A AS+PSPLQDFCVAD NSPVKVNG+VCKDP  VEAKDF  SG
Sbjct: 1   MASQLFFLTFLAITCSIALASDPSPLQDFCVADPNSPVKVNGVVCKDPNAVEAKDFSMSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           LNVA   NN VGS  TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVLE
Sbjct: 61  LNVAGDTNNFVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS PENRLITKT+NKGDVFVFP+GLIHFQQNIG G AVA+AALSSQNPGVI 
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           IANA+FGS PDIST+ILAKAFQTD AII NIQ+KF
Sbjct: 181 IANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match: gi|449433660|ref|XP_004134615.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MAA   FLTF A+TC +A AS+PSPLQDFCVAD NSPVKVNG VCKDP +VEAKDFF SG
Sbjct: 1   MAASAFFLTFFALTCSIALASDPSPLQDFCVADKNSPVKVNGFVCKDPNVVEAKDFFMSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           LNVA   NNPVGS  TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVLE
Sbjct: 61  LNVAGDTNNPVGSVVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS  ENRLITKT+NKGDVFVFPVGL+HFQQNIG G AVA+AALSSQNPGVI 
Sbjct: 121 GTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           IANA+FGS PDI T+ILAKAFQTD AII NIQ+KF
Sbjct: 181 IANAVFGSKPDIPTNILAKAFQTDSAIIANIQSKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match: gi|659078083|ref|XP_008439540.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 345.9 bits (886), Expect = 5.1e-92
Identity = 174/215 (80.93%), Postives = 190/215 (88.37%), Query Frame = 1 

Query: 1   MAAPLLFLTFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWSG 60
           MA+ L FL FLAIT  +A AS+PSPLQDFCVAD N+PVKVNG+VCKDP  VEAKDFF SG
Sbjct: 1   MASQLFFLAFLAITSSIALASDPSPLQDFCVADPNNPVKVNGVVCKDPNAVEAKDFFMSG 60

Query: 61  LNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVLE 120
           LNVA   NN VGS+ TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVLE
Sbjct: 61  LNVAGDTNNLVGSKVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVLE 120

Query: 121 GTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVIL 180
           GTLLVGFVTS PENRLITKT+NKGDVFVFP+GLIHFQQNIG+G AVA+AALSSQNPGVI 
Sbjct: 121 GTLLVGFVTSNPENRLITKTLNKGDVFVFPIGLIHFQQNIGHGPAVAIAALSSQNPGVIT 180

Query: 181 IANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
           IANA+FGS PDI+T+ILAKAFQTD AII NIQAKF
Sbjct: 181 IANAVFGSKPDIATNILAKAFQTDSAIIANIQAKF 215

[Close]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match: gi|659078081|ref|XP_008439539.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 8.7e-92
Identity = 174/216 (80.56%), Postives = 189/216 (87.50%), Query Frame = 1 

Query: 1   MAAPLLFL-TFLAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWS 60
           MAAP+  L TF A+TC +A AS+PSPLQDFCVAD N+PVKVNG VCKDP +VEAKDFF S
Sbjct: 1   MAAPVFILITFFALTCSIALASDPSPLQDFCVADRNNPVKVNGFVCKDPNVVEAKDFFMS 60

Query: 61  GLNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVL 120
           GLNVA   NNPVGS  TP +V QIPGLNTLGIS+VRID+AP GIN PHTHPRATEILTVL
Sbjct: 61  GLNVAGDTNNPVGSAVTPANVVQIPGLNTLGISMVRIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVI 180
           EGTLLVGFVTS  ENRLITKT+NKGDVFVFPVGL+HFQQNIG G AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLITKTLNKGDVFVFPVGLVHFQQNIGYGPAVAIAALSSQNPGVI 180

Query: 181 LIANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
            IANA+FGS PDIST+ILAKAFQTD AII NIQ+KF
Sbjct: 181 TIANAVFGSKPDISTNILAKAFQTDSAIIANIQSKF 216

[Close]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match: gi|449433714|ref|XP_004134642.1| (PREDICTED: putative germin-like protein 2-1 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 171/216 (79.17%), Postives = 188/216 (87.04%), Query Frame = 1 

Query: 1   MAAPLLFLTF-LAITCWVAWASEPSPLQDFCVADLNSPVKVNGLVCKDPKLVEAKDFFWS 60
           MA+ LLF  F L I+  +++AS+PSPLQDFCVAD NSPVKVNGLVCK+P LVEAKDFF+S
Sbjct: 1   MASQLLFSAFFLLISFSISFASDPSPLQDFCVADPNSPVKVNGLVCKNPSLVEAKDFFFS 60

Query: 61  GLNVAAAVNNPVGSQATPVSVAQIPGLNTLGISLVRIDFAPHGINPPHTHPRATEILTVL 120
           GL+VA   N P GSQ TPV+V QIPGLNTLGISL RID+AP GIN PHTHPRATEILTVL
Sbjct: 61  GLHVAKDTNTPTGSQVTPVNVVQIPGLNTLGISLARIDYAPWGINAPHTHPRATEILTVL 120

Query: 121 EGTLLVGFVTSIPENRLITKTMNKGDVFVFPVGLIHFQQNIGNGSAVALAALSSQNPGVI 180
           EG LLVGF+TS PENRLITKT++KGDVFVFPVGLIHFQQNIG+  AVA+AALSSQNPGVI
Sbjct: 121 EGKLLVGFITSNPENRLITKTLHKGDVFVFPVGLIHFQQNIGHHRAVAIAALSSQNPGVI 180

Query: 181 LIANAIFGSNPDISTDILAKAFQTDPAIITNIQAKF 216
            IANA+FGS PDI TDILAKAFQTDPA IT IQAKF
Sbjct: 181 TIANAVFGSKPDIPTDILAKAFQTDPATITKIQAKF 216

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL82_ORYSJ1.5e-7267.14Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1[more]
GL21_ORYSJ3.4e-7264.81Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600... [more]
GL23_ORYSJ1.3e-7167.86Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800... [more]
GL22_ORYSJ4.9e-7166.04Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700... [more]
GL111_ARATH3.5e-6964.32Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 P... [more]
BLAST of Cp4.1LG12g04570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIX1_CUCSA1.2e-9281.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525580 PE=3 SV=1[more]
A0A0A0KKX1_CUCSA1.6e-9280.93Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525590 PE=3 SV=1[more]
A0A0A0KIB9_CUCSA1.1e-8879.17Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525600 PE=3 SV=1[more]
A0A0A0KKW4_CUCSA1.9e-8573.02Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525540 PE=3 SV=1[more]
M5X6A4_PRUPE1.6e-8170.70Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026076mg PE=3 SV=1[more]
BLAST of Cp4.1LG12g04570 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38940.12.0e-7064.32 RmlC-like cupins superfamily protein[more]
AT5G38930.14.9e-6963.85 RmlC-like cupins superfamily protein[more]
AT5G38960.14.9e-6964.90 RmlC-like cupins superfamily protein[more]
AT5G39110.18.4e-6962.15 RmlC-like cupins superfamily protein[more]
AT5G39190.11.6e-6764.65 germin-like protein 2[more]
BLAST of Cp4.1LG12g04570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433678|ref|XP_004134624.1|1.7e-9281.86PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
gi|449433660|ref|XP_004134615.1|2.3e-9280.93PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
gi|659078083|ref|XP_008439540.1|5.1e-9280.93PREDICTED: putative germin-like protein 2-1 [Cucumis melo][more]
gi|659078081|ref|XP_008439539.1|8.7e-9280.56PREDICTED: putative germin-like protein 2-1 [Cucumis melo][more]
gi|449433714|ref|XP_004134642.1|1.5e-8879.17PREDICTED: putative germin-like protein 2-1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR019780Germin_Mn-BS
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04570.1Cp4.1LG12g04570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 107..127
score: 3.5E-28coord: 139..159
score: 3.5E-28coord: 172..187
score: 3.5
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 60..205
score: 1.8
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 59..209
score: 1.9
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 23..214
score: 6.49
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 22..214
score: 7.5
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 102..115
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..215
score: 5.4E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04570Wax gourdcpewgoB0174
Cp4.1LG12g04570Cucurbita pepo (Zucchini)cpecpeB163
Cp4.1LG12g04570Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04570Cucurbita maxima (Rimu)cmacpeB898
Cp4.1LG12g04570Cucurbita maxima (Rimu)cmacpeB906
Cp4.1LG12g04570Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04570Cucurbita moschata (Rifu)cmocpeB836
Cp4.1LG12g04570Cucurbita moschata (Rifu)cmocpeB842
Cp4.1LG12g04570Wild cucumber (PI 183967)cpecpiB154
Cp4.1LG12g04570Wild cucumber (PI 183967)cpecpiB151
Cp4.1LG12g04570Cucumber (Chinese Long) v2cpecuB149
Cp4.1LG12g04570Cucumber (Chinese Long) v2cpecuB152
Cp4.1LG12g04570Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g04570Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g04570Watermelon (97103) v1cpewmB155
Cp4.1LG12g04570Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g04570Cucumber (Gy14) v2cgybcpeB729
Cp4.1LG12g04570Cucumber (Gy14) v2cgybcpeB732
Cp4.1LG12g04570Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g04570Silver-seed gourdcarcpeB0117
Cp4.1LG12g04570Cucumber (Chinese Long) v3cpecucB0173
Cp4.1LG12g04570Cucumber (Chinese Long) v3cpecucB0176