Cp4.1LG12g04280 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g04280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Golgi to ER traffic 4
Location	Cp4.1LG12 : 3207315 .. 3220833 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATAGTTTAATATATTCGAATATATTATAATGTTTAAATATAATTTTTATATATAAAAAAAAAATAGATATTTAAGAAAAAAACCCTAAAAAGTTTCCAAATAAGTTTTGTTATTGTGGTGGCAGATAAAACGATTTTAGTTTTGAAAAATACCATTTTTTGAGAGAGGGATATAAAAGGCTTATTATAATCACGTACCTCCATTTCTTCTTTTACACTTCTCAATCCAAGACGAAAACAAAAAGTCCCTGGTTTTGTTCTTCTTTCTTGAAGGATCATCAACTGAACGAATTCATTCTTCTGCCATCGTTATTCGAATCAAAATGAGCTCCCACCCGTTGCAGAAGACCATGTCCCGCGCGAGATCCAGGCGAATCGTGTTGCCTCCGGTTCAAGAGGTAATGAATGCTCCAAACTTGTTGTTACAGATCTTTTCCCTCCCTCTTCTTCATTGTTTACGTTGTTCAAGAACTATTTTCAGCCTTGAGTCGGAATTTGTGGTGGTATAAGAATTTTATGACTATATTTTTGTCATCGCGATTCATTTTCTTACCATTTCTTATGATTTGTTTGAAATGAAGAAATTGCATGACGTTTTGTTTTTGCGATTGCTATCAATTTCTGACCGGAAGCGAAGATAAGCGATACACTAATCATTGAGGATGTCGTGTTTGGATCAAAAGAATTTCAGTTTCGTGGATTATTTAATTTTAACTTTGTAATATACTCGTGGCATCATTGTTTTTAAATCACCCTTTTAGTTCATTCAGCAGAAGCCTTGTCCTCCAGTTAATATGTTCATTGTGTTTGTGTGTTTTTCTTGCTTTATAGCTGGTTTTAACCTCTCCCTCATTGAGAATCGATTAGTTTCTTTAGGCAAATGCATTGTTTTTTAACTGAGTCGAGGAATGTTTAGACTGCATTAACTTCTTTGAAACTGTGATTACAGCATATTATTAAAATAGAAGACGTTGTCGACAGTGGTGACTACTACGGTGCTCAACAGATGTACAAATCTGTCAGTGCAAGGTACAGTAATACCTTCTTCATTTGGTTTTGATCTTAAAAAAATAAATCCTTCCAAATTATTATGCAAAATGGGCACGTAGAAAGTGATTCTTACTAGTAGATAATTAATGGTGATTAGTTGATAACCAGTACTCCCAATGTCTCTGCTGCACTCCTAGTTAAACTGTTTATAACTGGCAATTTCTATCAATCACAAATAGTAATAGACATATACTTCTTCAATTATTGTTAAAACCACTGTCTTCACCCAAATGATTATGCAAAAAATGGGGAATCAAGAGGCATGTTATTGAACATGTGTTTGTCTCATTTCAGATACGTGGCTGCAGAAAGGTACTCAGAAGCCTTGGATATTCTTCAGTCAGGGGCTTGTACCCAGTTGAAACATGAGCAGGTCAAAGCTAGTTGCATCTTTTCTGCGTATGTAATTACTGGATTGAATGTTATTTTAGCATTTGTAGCACAGTGTATCCTTATTTTAAAATTCTGAATGGCGCTATTACTTAGGCTTTGAAATTAAATTTCATTTCGTAGCCATATTTGAAGTCCTCAACTCTTGAGAACTGGTAAAACTTGAAAGTATATTGGTTTAAATATTATTCATGAATGTAGACATGACACATTGATAATAAACCAAATTTCATCGAAACTATGAAATTGAAAGGGGTAAAAGCAACAAAAGAGTTAAGAAAACAATAGCTGAGGGGGAGTAATTGCAAGAAAGAAGGGAAAAAAAAAACAAGAAAATATTAAAGCTTTCGAGAGCTGAAAAACTAATGCTTCCATCCTTAGGATCCTTGTTTTCTTCTCCCCTTTTCTTTTTTTCTTTTTTCTTTTTAGACAAGAAACATAACTTTCATTGTAAAAAGTGAGAATACAAAAGGAGGGGGATATGAGATATCTCCACACACCAACGGGTTACAAAAAAGAAGCCCAGCTGGTGTAAATATGAGTTAGGCTATAATGAAAAAAAATTCCTTTTGAAGTAGAAGCAAAAAAGTAACCAAATCCCAAAAAACGCCCTTGTTAGTTTCTTAACCATGAAAAATTCTGGAATTTTGTTCGGACCACAGTCTCCAAGGGAGAGCAAATACACCATTGAACTATAGGATTTTAGTCTGAGCCTTAAACTGAGGGCTATCAATAAGTCGAAGGAGGACATCCGATGCTTTGTTGGGCCAACACCACTGCATATTGACCAATTTAAACAACATTTCCCAGCAATCAGCAGTAAACGGGCATGAAAGAAGAGATGCATCAAAGTTTCCTCACCTCTTTTATAAAGATAGCATTAGCTGTGGGAAGGGAAGAATTTCGATGTACTCTTTGGATTTTTCAGCAAGTATTCAGCCTCTCAAAAAAGAAAATCCACCAAAAGATCTTGGCCTTCTTAGGACACTAGGCTTGCCACGTAATATCAGATTTTTGTTTGTCCAAAGCCTCTTGATGCAAAATAAACTTGTGAAAAAAAAAAAGAAGAGATTTAACCTTCCTTTTCCAGCATTTGCACTTTCAAATCTTCTCTGTTTTTCGGTCTAAAAGCAAGTAAGTGGTTCAAGAGAGTTTCCCACTCTTCAATCTCCACATCAGTAAGATTCCTTCTAAACTTTTGATCCCATACACAATGAGAATCCTTGTTTTCTAAAATAGTCATTTAAATAAAAACTTTAAAATTGGAAGAAAAAAACTAAGCTTTTATATGCTGATGTACTATTCTCCCTTAAAAATAAAATAAAATAAATTATCTAACAAAAACAAGCCTTTCAAAAGGAAAGTAGTCATATCTTACAGATTTTTACTCGTATCATCTCAATCCTTGTCAACTCCAGCACCATAAGTTTGATGAGTATGGTCTGGAGAACTATAACCTTGTATTTAGTTTCTCCTTGGTTACCCTCCGATTTATTATTAGGGGTACATTTTCATCTTGGATCTTGTAGGGATGTTTGTTCTTAAAGCTCCAATCCTTTGGTTGGGTTTTCTTTTCGTTCTTTTCGATTTATGTGGTTCCCCCCTCCAAAGCCCTCCTCTTTGTTTTCTTCCTTGTGGAATGTTAAGAGTCCTAAGGATGGTTAGTTTCTTTGTCTAGTAGGCCTTGCATTGGTGGATTAGCACTATTGAATCTATTCAAATAGGTTTTTCCATGTTGTTGGGTCCGAAGTGGTGTGTTTTGTGTAAGTGTTTTTAAGAGTTTAGACAGTGTGCTGTGGAGTTCGTGTTTATGCCACCTTGATATGGGACACATTTTTTTGGAGACTTTTGGTCTTCTTTTGGTTTGTAGTTGTTCTTGTTGCTTGATGTCAGAAGAGATGCTATTCCATCCTTAATTCAGAGGGGCATGGGAGGAGCCCTGTGGAGAACAACCTTCTATTTTGTAGAACACTTGGTTCAAGAGAAATAGGACTTTTAGGGGTTGAAGATGTATAGGTGTAGCTGTGGACTATGACTAGGTTCAAAGGCTTTGTGTACTGATCCTTTGTCTATTATCATCATTTATCAATATTGGAGCGTCTTTTGTGATGGTGTTTTTTTTTTTCCTTTTTTCTGGCTTCTTTTGTTATTGACTGTTTTTTGTATTGCCTGCTTGTATATTCTTTCATTTGCTATGTGAACGTAGGGCTTTTTATTCATTTATTTTAAAGAGAAAGAAAAAAGGAAAAATAGCCTTCAACTTTTGTGCATAAGAGATAAACATAAAGATTTTATAATGTCGTTTTAGGGGGGTCAAATAAGTCTTTAGCAATGTTTCTAGCATCGTCATCGGCGACTATTTCTTTATACACTAGATTAGTAGTGAGTCCAATGCCGGCAAAGAAGCTATACTCCATTTAACTAGATTATTTCCTCCCTCCTTTGGAGGCCCTTTCCATGTGAAGTTTTGTATGCATTTTTCAAGGTCCTTAGTGACTTTCTTAGGGAATTTGAGAAGAAAAAGATAATAGAGATGGACACAAGATAATACCATTTTTGTAAGTGTCAACATCCTGCCTTTTGAGCAATCAAGAAAGATTACTCCTCATATAAAAACTCTAGCCAATTGGATCTAAGAATTCTCATGGATATGCAAACTCCTAGATCACAAATTCTAAAACCTTCAAATCCAGATGATTTCATCCCAAATGACTATAATTCTTAAACTATAAGTCATGGTAATTCAATCTAACAACCTTATTGAAGAATATTACCCTTAGGTCCAAAATAACCAAGAAGGCTAAACTAATAAAAATACTCCTAAACTTTTTACTTTTGTCTAAAAAATACTCAAACTTTCAAAAGTTTCAATAATACCTTAAACTTTCAAAAAAGTCTAAAAAATATCCTTACCGTTAGTTTTGGATGGAAACCGTTAGTACTTTGTTTCAAAAAGACCCTTGAACTTTAAAAAGTTTCCTCGATATCCTTCAACTTTTTTAAAAAGTTCAAAAATACCCTTACCATGAGTAATGTGTTTAAAAAATACCCAAGAAATTTTAAAAGACATCATTTGCCTTAAAAAAAAAAAAAAAAACCTTCTGTCAATATAACGAAAACCTTCTATCAACATCTCATAGATTATCTTCAAATTTTTTAATGTTACTTTTGAAAGTTCATATTCGTAAGTGTTTTTGAAACACGGTACTAACGGTAAGGGTATTTTAAATTTTTTTAAAAAGTTTAAAGATATTTTTTTTTTGTAGTTTTTAAAGAAGTTTTAGGGTATTAATTTTTTTTAAAAAAAAACTCAAAGTGTATTTTTGAAACACTTTTGAAACTTAAAGTGTGTTTTCTAAACACTTTGAAAAGTTAAAGGGTATTTTTGAAATCCTTTTGAAAGTAAGAGGGTTTTTTTTTAAACCTTTTTGAAAGTTAAAGTGTATTTTTGAAACAAAATATTAATGGTTTCCATCCAAAGCTAAATGTTAGGGTCTTTTTGAGATTTTCTGGAAGGTTTAAGGGTATTTTTGAGATTTTTTAAAAAAAAGTTTAAGGGTATTGTTTGGACTATTTTTTAAAGTTTAAGAGTATTATTGAAACTTTTGAAAGCTTTAGGGTAGGTTTGAGACAAAGTGCAAATTTCAAGGGTAGCTTATTAATTTAGCCCACCCAAGAACCCCAAAACGATAAGTAATCACCCTAAGGGAAAGTAAGATCCAGATTGCTTTGTTGATCAAATATCTCAAGGTAAGAAAACTTGTTTAAGATTTGAATCACTCCACAAGCAAGAAATCATGTCAAGCTTAAATGCAACCTAAATTACATAGGATTGCAAAGAAACTTAGCCATTGGTTAAAAGAAAGCACAAATGATATTTTTAAGTCTAGTTTACAAAAAACAATATACATGCTTTATATAGCCTCAAAATGAAACCTTTGACCTTTCAAGAGTTTAACCTTTGACCTTCCGTGAAATTAAGCCCATTTTCTCTGTGAAAAATCCTTGAACATGGGTCTTCCACTCTATTATTTCCTTGCTGAGAATACCAAATTTCTAAAGACCCTTTCTCGCCTTTTCTGGCCATCTCTATTTGAGATGATAAATCTGCTGTAAATCTTGGCAAAAAATTTCTTCATTGAGAGAGACCCCTTTCTGACCCCTGGTTCAGCCTACAATGATAGTGATTCTCCCATCTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTGTGGGTTTTTCAAATTTGTTTATTAAAATATCTGCATAAATGATCGATTAACATAGGATTTGTGTGGAAACAAACAATGCTTTTAGTGTTGAAAATGGGGAAAATGAAGTTCATATTTTTCATCAATTGAGTTGCAAATGGCTAACGGTTACTACTTTTCAGGTTACTTGTGGAGGAGAGCTTGCTGTGTTATTTGTGGAGACACTTGTTAAAGGCAAAGTTCCTTATGATGATAATAGTCTTGGTGGGTTCCTTTGACATGCTTGATTGTATTTCTTTTATAAGAGTATAGGTAGATATTGAGGATGTAACTTGGATCTTAGTAGTGCCATAATTGTAATTACATAGGAAGTTCTCAAAACCAGAAAAAAAATTACCTTTGAAGTTGGTCAGACTGGATGGTTAAATAGAGTGCGTTGGAGGCTTGAAAGTTAGGCAAAAATTTGGAATGCCCCATGGTGAGACTTGAGAGTGAAATAGCCCTTTTGAAAGGATATTGTTATTGTAATTTCTCATATTCAATTCTCTTAAATTGTTGTTTTCTAATGATCTGAATCCTATCATTTTTCCATTGCAGTTTTAGTGTTTGTTATTCAGTATTTGCATTTCAATTTTAGATTCAGTTTCTTTTTGTTAACTTCGTCGTATGTTCCTTATATTTCTTTCTAAGACGAGTCTATTTGAGGATTAATTTGGTAACCGCAATATGGAAGATTTTTTTTTTCATATCTTTACTACCTTTTATTGTCTACTGTTGTTTATGAAGTTCTAATGCCCATCTTTTCATGATTATGACGAACATTATGTTAGATCGTGTCAGGAAAATTTACCAGAATTTCCCTCAGATTCCATTGCCTCAACATTTTGGGGAAGATGATGATGTGCAACAACTTTCTGAAGCACTTGGTGCTGCAAAAACACGTGTAGAGGGATGTTCCTCTTTTCTGAAAGCAGCTTTAAAGTGAGCCATTGCCCATTTTCTTCCCAGTAATAATTAGTCATTTCTTTANACGTGTATTCTGAGTCACCAGAAGTGGTAGGTTTGACCGGGAATATCACTCTTTTAAGTACTTGTTTGTACTTGTTCTTTGTTTCTAAGAATTTGTGTTCTGTGTGTATCCACTTCATTTTAGAGGTAAATGACAGGTCTAATGTTACTTCAGTCCCTTTGGGGATAGAATAGTTGTGTTATTTCAGTGTCTAATGTCCATAATGTCTAGATTTTTTAGAATTGACTTATTGGACTTGTTAATAGAAACAAGATGTAGCATTTTGAGAAGGATTGTTGATTGATTTTTTAGCTAGCCTCTTAAACAATTTGGATAGTTTGCTTTATAGCCCAGCAAGACAGATCTTTTATGAGTATGTAATTTGGCAGTGCACGTTGTACTGCTGCTGTAATTTATTTTGCTAACAAGTTTATGAGAAGAATTTGCATGACCTTTCAATCATTCATTCAATATGATTGTTGAAGCGTGGTCCAGTAACATGAATTGTGAAACTGTTGTTGCTTGTCCACTTTGAATGGTTTATTAGAATCTTCCAGTATTCTACTTGTTGCAGGACATGACCAGAGTAACATATCACTTGGTTCGAGGAAATAACCCCAAGAAGTTTGCTTCTATGTTAGTGAATTTTATGGGCAAGGTTATAAGAGTTTTTCTTTATCTCTCATTTTTTAAGGATCAGTATGCAATCTTCATTCAGTCTCCGTACTTATTTCCATGGTTGAAGTAAGGTTTAAGTCGTGTATTATTCTAATTGCTCCTGAAATTATTATTTTCCTTAGGTGTACCTATTTTCTTTCACATAATTTGTGACCCTTGCATCTTTCGACAGTCATTTAGTTAGTACTTATGCAGCTATTAATCTATATTTTTCAAAGATAGTTTGATTTGATCTCTTATTTTCTAACGGTATGAAAAGATCTAATGATGATGACTATGGCAATGTCGGTGTCATTTTCATGGAAGAGAAAACATTTATAAAATATAATGTTAATTGATATTTTTTTAACAAATCATTAAAAATATTTGTAACAAAATTTGTAAATTAATAAGATATTGACATTTTTAAACAAGTTAAAGCCTTTTTTTTTTTTAATTAGTTTTTATCTTTGATATTTTGTTAATAGTACTTTATTTTGTCGATGGTTTCACTGTAGAATGAAAATATTGACATCATTGGTTATTTAAACCTTAAGTCTTGATTGTAGATAGTTGGAGTACAGGCTTTCTAGTGTTTGCTATGTTCATGAGTAGAAATAAGATTTTGTTATTCGTTGGAGACAGAAACAACAATAATATAATTTCTTGATATGATTAAATTACATACAACACCGGACTTCCCAAGCCATCGGAATTACAAGAAAAGTTTCCGATGGGATGTAAGATAAGAGGCAGCAAAATTCTTAAAGAATACGTATTTTTTACACCAGGACAACCAACAAAACTAATGAATCAAGATTATTTTTGTTGTTTATCTACTCGAGGTATTGTATTCTGTCCAGCGGATCATTTTGTCATCTGTTTTCTTGTTCTGTTTTCATTATTGAACTGAGCCAATGCTTTTTCCCTCCCTGCAGTGTTATCCAGGTGAAGATGATATGGCTATTGCACGGGCAGTTTTAATGTAAGACTATCAAAAAGTCACTTATAAGCCACCATTTGAAAATTCTCTTGGGTTAGTGTAAATTGGAGTGATAATGAACTAATTATATGGAAAAATATTGACACAGAAAATCTGTTGAAAATGATGGAATTTTTGTATTATGAGTATAGTTGCCAATAGTTTTAGTGGGTACATACTAAGCAATCAATTTTTAACTTTAATGAGTCAATTTTAAAAGTCAAGCTTTGGGGATTTTTATAATTATTGCAAATATTGCAATTTTATTATCAAATTTTCTTTGAAAATTGAATATGAGTAAATAACCAGCATTATGAACTTGCAAACCCTGGAACTATCAATTGATTCATGGTCCATGTGTTTTACTTTCATTAATACGGGTGTATAGAGTGAAGAATTGGAATTTTTGAGTTGTAAGGGTTAGATTGTCATTTCGACAATTCCAAAGCCACTAAAATGGAGCATGATTTCACTTGTGACTATACTTATATAAGACTAGAACTACTGTTTCATAGAGCAATGAGTACAGTTTTGTTCTACTAAGAGGTTTCCTTTTAAAGTGTCGAATAGTGTGTAGTTTGCACAAAAGAATTTGAGGATATTAGCCGTAGGTATTGTGGTGTATTGCCAAATCATTTCCCTTGGGTGTTGTATTTTGAGATATTATGGACCAAGCTATGAAACTATTGATAGACTGCAATTGGTTCATTACATGTAGCCTCTTAGTAGCCTTTGAGCGATGGTCCTTCTTGACATATATTTTTTCTCTGTGCTTTGGACGGCTAAAATTATATTTTTGGAGGTATTTGTTTGGCTAGGTGCTTGAAGAAATATTTGAAGATAGGATGTTATATATGTTTGTGCTTACTTATTGGAAACTTCAGAGATTTCCCCCTTTCTGTAAATGATAGACAGCAATTGGTTCATTACATGTAGCCCTCTTGAGCTTTCGCCCTCAAGTTTTTTCTCTCAAATTAATTGGGAACCGTGGGTAGTCTTGTGGGCTTGACAATAGTTCTCAATCTCATCCCAAATCCGAGAAATTAGGGAATAGGGTGAAGACAAAAGTTAAAATCCCTTGCGGGATCGGGAATTGGGAGGGATGTCATTGCAATTAAGCATGTCATTTCATGTCTTTGAACTTTTGTGATGACTGTAATGTCCGTGCTAATTTTCCTCTAGACCCATCTATCCTTCTTCTAACCTCTAAACACTGTGTTCCCCCGGTTTGAACTAGGAAACCGTTCCTACAAAGATTGAATGGAAGTCTTCCATGGAGGTTGACAAAAATCATAGAGGATGCGGAGTAAGAATAGTTGAGTTCCATAAAGATAATATTTACTTCATCTCCATCCATTGGCTTTGTGAAACCTTCCAGACACTTTTCTCAACTCTTCTCAACTTGTTCAAGGAGCTAAAACTTGAAAGTTTTATCTTCTAGGTTGAAAGGCTGATGACAAGCGAGTAAGTCTTGGGCTGCATAAATTTTATTATCTCTTCTTCGAAGAATAAGATAGATTGGCCTTCTTTCTTCAAACTTCTTGTACCATTATCTAGAGTGGTGGATGCCCCTAGTGCACCCTACATCACTCACTGAGCCTTTGTCCTATTTTGATTCCAATGACCTCATTTGAGGTTGCATATGTTGCTTAGAAGTGCCTTTTTCACAATGATCGGCTCAAAATTCAAAAAGCTTTGGAAAAAGTTACTTAGTCCCCTATTGCACCCTTAACCCTTTCCACCCTTACAAGGCCCTTTTAAGATATGAAATGCAGACCAAGTTTGACTGTGAGCAAAAAAAGGTAGGTAAGTGGTTGATGTATTTGAACTTTCTTTGGAGTTTTGGAGTGTGAACGAGCACTCGAACCAGTTGACATGCTGTCTTATTGAAATTGGATAAAAGTAAGGAAAATCTGTCTTCATCCGTTGAACTTGGAGATTTTTTAAACACATAGGCCTGGCACATTTAGGCTTTATGGATTGCCCCAAAAAGAATTCTAGAAAACTCAACATTTTGGAAGCCTTGATCAAGGTTATACACTTGGCATGAGATTTTGTTTCATAAGAGATTGTTCTCCTTTCCTCTAATGATTCATCAAGCTCTGTTGCGCTTGTTGCCCCTTTTGTTGATGCATGCTTGCTATCATTGTCACTCAAAATTGTACTGTTCCTTCCGAGCCAAAGGGACCAAGAAGATGCTCTAGTTAAGTGGATCCACATTATTCTTTTAACATTCTTGAACAGATGTCCCGTAGTGCAAATGAGCAGATTTTTGGATCCGTTGGTTCCATATTTCAATGGAAGGTGGAGGGGATAAATGCTCAGGAATCTCCGGCCTTACGGGCAATTGATTTGTGTTTCAGCATTCACCTTGCGAAGAGGGCACCATCAGGGTGAAAGAGAGAATTTTGTATCCTCCATTATATATGTGTGTCTACACACACATACACACACAACAGGTACAACTGTGATAGCCTCTACTCCATGTCCTAGCTCGTATGAGAGCTAAATTTGCCTCTATTGTTTGTCTCTTACCCTCAGCTTTCATCGAGCTAGCTTTTGATATTTCAAGAGTTTGCACCTTGAGCTCAAAGGCAAAGTTATCCCATAAAATGGCCCACTTGCCTGTTCCTTTTTTCCTCAACAATGGAAGAAAAATACTAAATAATTGATAAAAATGGAAAGAGAGGGATTTGAACCCTTATCATTTGGGGAAAAAAAATGTCTGAATTCTGTATCCTCTATTGTCTTTGGATGTAATATATAGTAGAATTATTGCTGCATCTAAAATGTTTGGGCATTCTTTTTGGATCTTTTCAGTTATTGTGATTTAAATGATTACATTCAAGGATGTAGACTTGCAGTTACCTTATCATCAAGTGTTCAAACAATTTTTCATCTCGCTGGTTAAGGGTAATTGACCACCTAGTTTAACTCCAACAATGCCCTCCAACTTGAAACAAAGCTCAAAGATTTTATACCTTAGAAAAGTATTATGGAATAGAAGACAGGATCGAAAACACATTAAATATTAAGAAAGAAGCCTTTTTTTCCCAGGACTTAAAATTATTTAATGTTCAATGAGAGTTCAGAGCTTCATCTCCGTTGGTGCATCCATATGGAATTTATTTCAGATTTTATGGTTCTAAACTGAAAAGAATGCTTTTTTCGTGATGTAGGTACTTGTCTCTTGGTAACCTAAGGGATGCTAATTGCCTCATTGATGAGTTAAAGAAGCAAGAAGAATGTGGTGAACTTGAGTTTCCTGATTCAGAATTGATTGAGTTTATCATCTATCTTTTGCTAACGTAAGATCCATTTTCTTTGTTTTGAATTAACTAGGCAACAGTATGTCTACTACAGCAGATGTAATGTGTGAAGTGGGAATAATGATGGCAATAAAATCAATTTAGCGAACAAAGATTAGCTCTTATATGGTTAAAGAACCATCAAATAGTGTATGATGTAAGAAGGCAACTCACAATCCTAGTAAATATATAATTATAGTGTGGCGGTTTGTGCTTTTTCAATATTGCCAAAACTCTTTGATATCTTTCAAATTTTCAAAAATACTTAAACGCACCCTTTCTATTGGAGGAAGTGGTAAGCAATTTTGTTTCTTTTTCTTTTCTTTTNTTCTTCGTCTTTGTCTTCTTCGTCTTCTTCGTCTTTGTCTTCTTCGTCTTCTTTTTCTTGTTCTTCTTCTTTCCTTAATATGTTTCTGAAATAGTGTTTCAATTGATTAATTAGAAGAACTCCCAGACACACTTAGTCTGGCTTGCTGGTTAAATTTTTAGTGTCAGTTCTTCTAGTTCTGTTCCCAGTATTGCAGTTGCCGGTAGATGCTTCTAGGATGGCATTTCGGCATAACTTAAAATATGCATTTGCAGGTTGCAGAGAGATGCTTTGCCTCTTTTCAATATGCTGAGGGCAAATTACAAGCCGAGTATCGAGAGAGAACCTTCCCTGAATGAGGTGCAACTCCTGTTACCGATACTTCGATAAATCAACACTTTTTGTAGAAAAAAATTGGTTGGAGTTGTATAATCGGATTTTAACTTTAGCATTTTGCTTCAGTTTCTTGATGAAATTGCAGAGAAGTTCTATGGAGTAAGGCGCAGAAATCCCTTGCAAGGGATCTTCGGAGATTTCTTGAAGGTGATTTTCTGTCTCATAATCTGTGTCCTATCGATTTAAATCTTCCTGAACTCTTATGCTTCTTCTATTTTGGTTTTTAAACTTTCGTGATATAGTTTTGATAAAAAGTTTAGAGACAAATAAAGCATTTGCATGTTGAGAGACTAAAATAGCTCGCTTGGAAGTCAAAACAAAAATTAATATGAAAAATCAAGAACCATAATGGAGTTTAAACCTAAGCGTTTAGACATTTGTAAAAATAATAATATAGAATGTAGCCATTGAAAGCTTTCTTGAGTGGTTTGTGTAACGATTTAGGTAGTCTTGATGGATGCAGTGCAATGGCTAATGCTCTGCCAGCTTCTTGTAGACTGAACTCTCTTCTCCTTAGTTTAGGCTCCAAGTTATTTTTTGGGTGGGGGATGGTCTTGTAGACTGAACTTTCTTCTCTTTAGTTTAGCTTCTAACTAGTGGCAACGAAGTTCTTGGTAATTAAGAATGGCTTAATTTTACTGTATCAATGAAAAATTTGTTTCCTTGTTTTCAACAAAAGAAGAATCTGACCATGGATTGTGCAGATGATGGGGTGATGACGATTGGCGAATAGCGAGGTCCAGTCAGCTTCCTACTACTGTTGGCTGGTAAAGCTTCTGTGCTTCCATGGTTCATTACAAAGATGGAATTGGATAAGCACATTTTGGATTGTTTTCCAAATATAGAAGGTCACACTTTCCCTTTCTTGCATGCACTGTTTGTTATTCTTTTATAAGTGACCTTTTTCCTTGAACATTGATGATGAATGACTTGAAAACTCTGCATTATTTAGCTTTATCCTTCCAAAACCTCTCTCTCTCTCTCTCCCTCGCTCTCGTGTGGAATCAAGTAATTTGGTTTGACTGGGTTTTGGGGGTAATCTATTGCAGCTTCTCCTTTTCACTTGCCCATCCAAAACTTTGCTCATGTGATGGGGTAAGTGCATGAATACTTTTCCCCCCTTGTGCAAGCCACTTTGAGATTAAGTACAAAGAACCAAATATCACTAACTTATGCAATGAAGTTGATAATGCAGGGATTAGTTGGTGA

mRNA sequence

TTAAAATAGTTTAATATATTCGAATATATTATAATGTTTAAATATAATTTTTATATATAAAAAAAAAATAGATATTTAAGAAAAAAACCCTAAAAAGTTTCCAAATAAGTTTTGTTATTGTGGTGGCAGATAAAACGATTTTAGTTTTGAAAAATACCATTTTTTGAGAGAGGGATATAAAAGGCTTATTATAATCACGTACCTCCATTTCTTCTTTTACACTTCTCAATCCAAGACGAAAACAAAAAGTCCCTGGTTTTGTTCTTCTTTCTTGAAGGATCATCAACTGAACGAATTCATTCTTCTGCCATCGTTATTCGAATCAAAATGAGCTCCCACCCGTTGCAGAAGACCATGTCCCGCGCGAGATCCAGGCGAATCGTGTTGCCTCCGGTTCAAGAGCATATTATTAAAATAGAAGACGTTGTCGACAGTGGTGACTACTACGGTGCTCAACAGATGTACAAATCTGTCAGTGCAAGATACGTGGCTGCAGAAAGGTACTCAGAAGCCTTGGATATTCTTCAGTCAGGGGCTTGTACCCAGTTGAAACATGAGCAGGTTACTTGTGGAGGAGAGCTTGCTGTGTTATTTGTGGAGACACTTGTTAAAGGCAAAGTTCCTTATGATGATAATAGTCTTGATCGTGTCAGGAAAATTTACCAGAATTTCCCTCAGATTCCATTGCCTCAACATTTTGGGGAAGATGATGATGTGCAACAACTTTCTGAAGCACTTGGTGCTGCAAAAACACGTGTAGAGGGATGTTCCTCTTTTCTGAAAGCAGCTTTAAAGTGAGCCATTGCCCATTTTCTTCCCAGTAATAATTAGTCATTTCTTTANACGTGTATTCTGAGTCACCAGAAGTGGACATGACCAGAGTAACATATCACTTGGTTCGAGGAAATAACCCCAAGAAGTTTGCTTCTATGTTAGTGAATTTTATGGGCAAGTGTTATCCAGGTGAAGATGATATGGCTATTGCACGGGCAGTTTTAATGTACTTGTCTCTTGGTAACCTAAGGGATGCTAATTGCCTCATTGATGAGTTAAAGAAGCAAGAAGAATGTGGTGAACTTGAGTTTCCTGATTCAGAATTGATTGAGTTTATCATCTATCTTTTGCTAACGTTGCAGAGAGATGCTTTGCCTCTTTTCAATATGCTGAGGGCAAATTACAAGCCGAGTATCGAGAGAGAACCTTCCCTGAATGAGTTTCTTGATGAAATTGCAGAGAAGTTCTATGGAGTAAGGCGCAGAAATCCCTTGCAAGGGATCTTCGGAGATTTCTTGAAGATGATGGGGTGATGACGATTGGCGAATAGCGAGGTCCAGTCAGCTTCCTACTACTGTTGGCTGGTAAAGCTTCTGTGCTTCCATGGTTCATTACAAAGATGGAATTGGATAAGCACATTTTGGATTGTTTTCCAAATATAGAAGGTCACACTTTCCCTTTCTTGCATGCACTGTTTGTTATTCTTTTATAAGTGACCTTTTTCCTTGAACATTGATGATGAATGACTTGAAAACTCTGCATTATTTAGCTTTATCCTTCCAAAACCTCTCTCTCTCTCTCTCCCTCGCTCTCGTGTGGAATCAAGTAATTTGGTTTGACTGGGTTTTGGGGGTAATCTATTGCAGCTTCTCCTTTTCACTTGCCCATCCAAAACTTTGCTCATGTGATGGGGTAAGTGCATGAATACTTTTCCCCCCTTGTGCAAGCCACTTTGAGATTAAGTACAAAGAACCAAATATCACTAACTTATGCAATGAAGTTGATAATGCAGGGATTAGTTGGTGA

Coding sequence (CDS)

ATGAGCTCCCACCCGTTGCAGAAGACCATGTCCCGCGCGAGATCCAGGCGAATCGTGTTGCCTCCGGTTCAAGAGCATATTATTAAAATAGAAGACGTTGTCGACAGTGGTGACTACTACGGTGCTCAACAGATGTACAAATCTGTCAGTGCAAGATACGTGGCTGCAGAAAGGTACTCAGAAGCCTTGGATATTCTTCAGTCAGGGGCTTGTACCCAGTTGAAACATGAGCAGGTTACTTGTGGAGGAGAGCTTGCTGTGTTATTTGTGGAGACACTTGTTAAAGGCAAAGTTCCTTATGATGATAATAGTCTTGATCGTGTCAGGAAAATTTACCAGAATTTCCCTCAGATTCCATTGCCTCAACATTTTGGGGAAGATGATGATGTGCAACAACTTTCTGAAGCACTTGGTGCTGCAAAAACACGTGTAGAGGGATGTTCCTCTTTTCTGAAAGCAGCTTTAAAGTGA

Protein sequence

MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDDVQQLSEALGAAKTRVEGCSSFLKAALK

Homology

[Close]

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot
Match: GET4_HUMAN (Golgi to ER traffic protein 4 homolog OS=Homo sapiens GN=GET4 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-09
Identity = 28/84 (33.33%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 29  KIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELAVL 88
           K+   V+ GDYY A QMY+++  RY++  +++EA +++ SGA     H Q     +L++L
Sbjct: 29  KLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQNSAADLSML 88

Query: 89  FVETLVKGKVPYDDNSLDRVRKIY 113
            +E+L K +V   D  L+ + K++
Sbjct: 89  VLESLEKAEVEVADELLENLAKVF 112

[Close]

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot
Match: GET4_MOUSE (Golgi to ER traffic protein 4 homolog OS=Mus musculus GN=Get4 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-09
Identity = 28/84 (33.33%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 29  KIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELAVL 88
           K+   V+ GDYY A QMY+++  RY++  +++EA +++ SGA     H Q     +L++L
Sbjct: 29  KLRASVEKGDYYEAHQMYRTLFFRYMSQSKHAEARELMYSGALLFFSHGQQNSAADLSML 88

Query: 89  FVETLVKGKVPYDDNSLDRVRKIY 113
            +E+L K +V   D  L+ + K++
Sbjct: 89  VLESLEKAEVDVADELLENLAKVF 112

[Close]

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot
Match: GET4_BOVIN (Golgi to ER traffic protein 4 homolog OS=Bos taurus GN=GET4 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.7e-09
Identity = 29/84 (34.52%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 29  KIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELAVL 88
           K+   V+ GDYY A QMY+++  RY+A  +++EA +++ SGA     H Q     +L++L
Sbjct: 28  KLRASVEKGDYYEAHQMYRTLFFRYMAQSKHAEARELMCSGALLFFSHGQQNSAADLSML 87

Query: 89  FVETLVKGKVPYDDNSLDRVRKIY 113
            +E+L K +V   D  L+ + K++
Sbjct: 88  VLESLEKAEVEVADELLESLAKLF 111

[Close]

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot
Match: GET4_CHICK (Golgi to ER traffic protein 4 homolog OS=Gallus gallus GN=GET4 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 28/84 (33.33%), Postives = 49/84 (58.33%), Query Frame = 1


Query: 29  KIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELAVL 88
           K+   V+ GDYY A QMY+++  RY++  +Y EA +++ SGA     H Q     +L++L
Sbjct: 29  KLRASVEKGDYYEAHQMYRTLFFRYMSQGKYVEARELMYSGALLFFSHNQQNSAADLSML 88

Query: 89  FVETLVKGKVPYDDNSLDRVRKIY 113
            +E+L K      D+ L+ + K++
Sbjct: 89  VLESLEKSDAKVTDDLLENLAKLF 112

[Close]

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot
Match: GET4_DICDI (Golgi to ER traffic protein 4 homolog OS=Dictyostelium discoideum GN=DDB_G0281815 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 28/89 (31.46%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 27  IIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSGACTQLKHEQVTCGGELA 86
           +  +E     G+YY   Q YK++  R+   ++Y E + +L+SG    L+++Q  C  +LA
Sbjct: 6   LANLEAKFTEGNYYDILQSYKALYNRFSTQKKYKETVTLLESGCNKFLEYKQWNCAADLA 65

Query: 87  VLFVETLVKGKVPYDDNSLDRVRKIYQNF 116
            L +E     K+ Y D S + + KI++NF
Sbjct: 66  KLLIECYKNFKIQYSDESKEPIIKIFKNF 94

[Close]

BLAST of Cp4.1LG12g04280 vs. TrEMBL
Match: A0A0A0KCK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108520 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.6e-78
Identity = 147/156 (94.23%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYS 60
           MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDV+D+GDYYGAQQMYKSVSARYVAAERYS
Sbjct: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVIDTGDYYGAQQMYKSVSARYVAAERYS 60

Query: 61  EALDILQSGACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPL 120
           EALDILQSGACTQLKHEQ+TCG ELAVLFV+TLVKGKVPYDDN+LDRVRKIY+NFPQIPL
Sbjct: 61  EALDILQSGACTQLKHEQITCGSELAVLFVDTLVKGKVPYDDNTLDRVRKIYKNFPQIPL 120

Query: 121 PQHFGEDDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           PQH GEDDD+QQLSEALGAAKTRVEGCSSFLKAALK
Sbjct: 121 PQHLGEDDDMQQLSEALGAAKTRVEGCSSFLKAALK 156

[Close]

BLAST of Cp4.1LG12g04280 vs. TrEMBL
Match: A0A061FUP9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_043075 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-55
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MS  + +R  LPPVQE+I K+E  ++ G++YGAQQMYKS+SARYV+A+RYSEALD+L SG
Sbjct: 1   MSGEKPKRATLPPVQENIDKLEKAINVGNFYGAQQMYKSISARYVSAQRYSEALDLLHSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDD 129
           AC QLKH QVTCG ELAVLFVETLVKGK+P+D++ LDRVRKIY+ FPQIP+P + G+DDD
Sbjct: 61  ACLQLKHGQVTCGAELAVLFVETLVKGKIPFDEDILDRVRKIYKMFPQIPVPSNLGDDDD 120

Query: 130 VQQLSEALGAAKTRVEGCSSFLKAALK 157
           VQ+L+EALGAAKTRVEGCSSFL+AA+K
Sbjct: 121 VQELTEALGAAKTRVEGCSSFLRAAIK 147

[Close]

BLAST of Cp4.1LG12g04280 vs. TrEMBL
Match: A0A061FMH7_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_043075 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-55
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MS  + +R  LPPVQE+I K+E  ++ G++YGAQQMYKS+SARYV+A+RYSEALD+L SG
Sbjct: 1   MSGEKPKRATLPPVQENIDKLEKAINVGNFYGAQQMYKSISARYVSAQRYSEALDLLHSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDD 129
           AC QLKH QVTCG ELAVLFVETLVKGK+P+D++ LDRVRKIY+ FPQIP+P + G+DDD
Sbjct: 61  ACLQLKHGQVTCGAELAVLFVETLVKGKIPFDEDILDRVRKIYKMFPQIPVPSNLGDDDD 120

Query: 130 VQQLSEALGAAKTRVEGCSSFLKAALK 157
           VQ+L+EALGAAKTRVEGCSSFL+AA+K
Sbjct: 121 VQELTEALGAAKTRVEGCSSFLRAAIK 147

[Close]

BLAST of Cp4.1LG12g04280 vs. TrEMBL
Match: A0A061FN90_THECC (Uncharacterized protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_043075 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-55
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MS  + +R  LPPVQE+I K+E  ++ G++YGAQQMYKS+SARYV+A+RYSEALD+L SG
Sbjct: 1   MSGEKPKRATLPPVQENIDKLEKAINVGNFYGAQQMYKSISARYVSAQRYSEALDLLHSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDD 129
           AC QLKH QVTCG ELAVLFVETLVKGK+P+D++ LDRVRKIY+ FPQIP+P + G+DDD
Sbjct: 61  ACLQLKHGQVTCGAELAVLFVETLVKGKIPFDEDILDRVRKIYKMFPQIPVPSNLGDDDD 120

Query: 130 VQQLSEALGAAKTRVEGCSSFLKAALK 157
           VQ+L+EALGAAKTRVEGCSSFL+AA+K
Sbjct: 121 VQELTEALGAAKTRVEGCSSFLRAAIK 147

[Close]

BLAST of Cp4.1LG12g04280 vs. TrEMBL
Match: B9SD29_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1068280 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-55
Identity = 110/150 (73.33%), Postives = 132/150 (88.00%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MSR R RR  LPPVQE+I K+E+V++ G+YYGAQQMYKS+SARY +A+RY EALD+L SG
Sbjct: 1   MSRERPRRANLPPVQENIEKLENVINEGNYYGAQQMYKSISARYSSAQRYFEALDLLHSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQH---FGE 129
           AC QLK+ QVTCG ELAVLFVETLVKGKVPYDDN+LDRVR+IY+ FPQIPLPQ    FG+
Sbjct: 61  ACLQLKNGQVTCGSELAVLFVETLVKGKVPYDDNTLDRVREIYKMFPQIPLPQRLDDFGD 120

Query: 130 DDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           D++VQQL+EA+GAAKTRVE CSSFL+AA++
Sbjct: 121 DEEVQQLTEAIGAAKTRVECCSSFLRAAIR 150

[Close]

BLAST of Cp4.1LG12g04280 vs. TAIR10
Match: AT5G63220.1 (AT5G63220.1 unknown protein)

HSP 1 Score: 177.6 bits (449), Expect = 6.1e-45
Identity = 88/150 (58.67%), Postives = 117/150 (78.00%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MSR R +R  LPPVQEHI K+  V++ G+YYGA QMYKS+SARYV A+R+SEALDIL SG
Sbjct: 1   MSRERIKR-ELPPVQEHIDKLRKVIEEGNYYGALQMYKSISARYVTAQRFSEALDILFSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHF---GE 129
           AC +L+H  V CG +LA+LFV+TLVK K P +D +LDR+R I++ FP++P+P H     +
Sbjct: 61  ACIELEHGLVNCGADLAILFVDTLVKAKSPCNDETLDRIRCIFKLFPRVPVPPHLVDVSD 120

Query: 130 DDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           D+DVQ L E+LG A++RVE  +SFL+AA+K
Sbjct: 121 DEDVQNLQESLGEARSRVENLTSFLRAAIK 149

[Close]

BLAST of Cp4.1LG12g04280 vs. NCBI nr
Match: gi|778712213|ref|XP_011656863.1| (PREDICTED: Golgi to ER traffic protein 4 homolog [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 5.2e-78
Identity = 147/156 (94.23%), Postives = 154/156 (98.72%), Query Frame = 1


Query: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYS 60
           MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDV+D+GDYYGAQQMYKSVSARYVAAERYS
Sbjct: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVIDTGDYYGAQQMYKSVSARYVAAERYS 60

Query: 61  EALDILQSGACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPL 120
           EALDILQSGACTQLKHEQ+TCG ELAVLFV+TLVKGKVPYDDN+LDRVRKIY+NFPQIPL
Sbjct: 61  EALDILQSGACTQLKHEQITCGSELAVLFVDTLVKGKVPYDDNTLDRVRKIYKNFPQIPL 120

Query: 121 PQHFGEDDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           PQH GEDDD+QQLSEALGAAKTRVEGCSSFLKAALK
Sbjct: 121 PQHLGEDDDMQQLSEALGAAKTRVEGCSSFLKAALK 156

[Close]

BLAST of Cp4.1LG12g04280 vs. NCBI nr
Match: gi|659119577|ref|XP_008459733.1| (PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77
Identity = 147/156 (94.23%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYS 60
           MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDV+D+GDYYGAQQMYKSVSARYVAAERYS
Sbjct: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVIDTGDYYGAQQMYKSVSARYVAAERYS 60

Query: 61  EALDILQSGACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPL 120
           EALDILQSGACTQLK EQ+TCG ELAVLFVETLVKGKVPYDDN+LDRVRKIY+NFPQIPL
Sbjct: 61  EALDILQSGACTQLKLEQITCGSELAVLFVETLVKGKVPYDDNTLDRVRKIYKNFPQIPL 120

Query: 121 PQHFGEDDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           PQH GEDDD+QQLSEALGAAKTRVEGCSSFLKAALK
Sbjct: 121 PQHLGEDDDMQQLSEALGAAKTRVEGCSSFLKAALK 156

[Close]

BLAST of Cp4.1LG12g04280 vs. NCBI nr
Match: gi|659119575|ref|XP_008459732.1| (PREDICTED: Golgi to ER traffic protein 4 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77
Identity = 147/156 (94.23%), Postives = 153/156 (98.08%), Query Frame = 1


Query: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYS 60
           MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDV+D+GDYYGAQQMYKSVSARYVAAERYS
Sbjct: 1   MSSHPLQKTMSRARSRRIVLPPVQEHIIKIEDVIDTGDYYGAQQMYKSVSARYVAAERYS 60

Query: 61  EALDILQSGACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPL 120
           EALDILQSGACTQLK EQ+TCG ELAVLFVETLVKGKVPYDDN+LDRVRKIY+NFPQIPL
Sbjct: 61  EALDILQSGACTQLKLEQITCGSELAVLFVETLVKGKVPYDDNTLDRVRKIYKNFPQIPL 120

Query: 121 PQHFGEDDDVQQLSEALGAAKTRVEGCSSFLKAALK 157
           PQH GEDDD+QQLSEALGAAKTRVEGCSSFLKAALK
Sbjct: 121 PQHLGEDDDMQQLSEALGAAKTRVEGCSSFLKAALK 156

[Close]

BLAST of Cp4.1LG12g04280 vs. NCBI nr
Match: gi|502118610|ref|XP_004496342.1| (PREDICTED: Golgi to ER traffic protein 4 homolog [Cicer arietinum])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 111/147 (75.51%), Postives = 130/147 (88.44%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MSR RS+RI LPPVQE++ K+E VV  G++YGAQQMYKS+SARYVAAERYSEALDIL SG
Sbjct: 1   MSRPRSKRIELPPVQENVDKLEKVVKDGNFYGAQQMYKSISARYVAAERYSEALDILYSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDD 129
           AC QL H QVTCG ELA+LFVETLVKGK+PYDD +LDR++KIY+ FP++PLPQH  + DD
Sbjct: 61  ACIQLAHAQVTCGAELALLFVETLVKGKIPYDDETLDRLKKIYEGFPRVPLPQHLWDVDD 120

Query: 130 VQQLSEALGAAKTRVEGCSSFLKAALK 157
           +QQLSE LG+AKTRVEGCSSFLKAA+K
Sbjct: 121 MQQLSENLGSAKTRVEGCSSFLKAAIK 147

[Close]

BLAST of Cp4.1LG12g04280 vs. NCBI nr
Match: gi|694410676|ref|XP_009333738.1| (PREDICTED: Golgi to ER traffic protein 4 homolog [Pyrus x bretschneideri])

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 1


Query: 10  MSRARSRRIVLPPVQEHIIKIEDVVDSGDYYGAQQMYKSVSARYVAAERYSEALDILQSG 69
           MSR R RR  LPP QE+I K+E VV+ G+YYGAQQMYKS+SARYVAA+R+SEA+DILQSG
Sbjct: 1   MSRERPRRGALPPAQENIEKLEKVVEEGNYYGAQQMYKSISARYVAAQRFSEAVDILQSG 60

Query: 70  ACTQLKHEQVTCGGELAVLFVETLVKGKVPYDDNSLDRVRKIYQNFPQIPLPQHFGEDDD 129
           AC QLKH QVTCG ELA LFVETLVKG+ PYDD +L RVRKIY+ FP+IP+PQ  G+ DD
Sbjct: 61  ACNQLKHGQVTCGAELAALFVETLVKGRFPYDDETLGRVRKIYKAFPRIPVPQQLGDLDD 120

Query: 130 VQQLSEALGAAKTRVEGCSSFLKAALK 157
           +QQLSE LG AKTRVEGCSSFLK+ALK
Sbjct: 121 MQQLSETLGEAKTRVEGCSSFLKSALK 147

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GET4_HUMAN	6.7e-09	33.33	Golgi to ER traffic protein 4 homolog OS=Homo sapiens GN=GET4 PE=1 SV=1	[more]
GET4_MOUSE	6.7e-09	33.33	Golgi to ER traffic protein 4 homolog OS=Mus musculus GN=Get4 PE=1 SV=2	[more]
GET4_BOVIN	8.7e-09	34.52	Golgi to ER traffic protein 4 homolog OS=Bos taurus GN=GET4 PE=2 SV=1	[more]
GET4_CHICK	1.5e-08	33.33	Golgi to ER traffic protein 4 homolog OS=Gallus gallus GN=GET4 PE=2 SV=1	[more]
GET4_DICDI	2.5e-08	31.46	Golgi to ER traffic protein 4 homolog OS=Dictyostelium discoideum GN=DDB_G028181...	[more]

BLAST of Cp4.1LG12g04280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCK7_CUCSA	3.6e-78	94.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108520 PE=4 SV=1	[more]
A0A061FUP9_THECC	1.9e-55	72.11	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_043075 PE=4 SV=1	[more]
A0A061FMH7_THECC	1.9e-55	72.11	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_043075 PE=4 SV=1	[more]
A0A061FN90_THECC	1.9e-55	72.11	Uncharacterized protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_043075 PE...	[more]
B9SD29_RICCO	5.6e-55	73.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1068280 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g04280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63220.1	6.1e-45	58.67	unknown protein	[more]

BLAST of Cp4.1LG12g04280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778712213\|ref\|XP_011656863.1\|	5.2e-78	94.23	PREDICTED: Golgi to ER traffic protein 4 homolog [Cucumis sativus]	[more]
gi\|659119577\|ref\|XP_008459733.1\|	4.4e-77	94.23	PREDICTED: Golgi to ER traffic protein 4 homolog isoform X2 [Cucumis melo]	[more]
gi\|659119575\|ref\|XP_008459732.1\|	4.4e-77	94.23	PREDICTED: Golgi to ER traffic protein 4 homolog isoform X1 [Cucumis melo]	[more]
gi\|502118610\|ref\|XP_004496342.1\|	2.3e-57	75.51	PREDICTED: Golgi to ER traffic protein 4 homolog [Cicer arietinum]	[more]
gi\|694410676\|ref\|XP_009333738.1\|	2.8e-55	74.83	PREDICTED: Golgi to ER traffic protein 4 homolog [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007317	UPF0363

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0045048	protein insertion into ER membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0071818	BAT3 complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04280.1	Cp4.1LG12g04280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007317	Uncharacterised protein family UPF0363	PANTHER	PTHR12875	UNCHARACTERIZED	coord: 4..124 score: 5.9E-48coord: 141..156 score: 5.9
IPR007317	Uncharacterised protein family UPF0363	PFAM	PF04190	DUF410	coord: 57..154 score: 2.7
None	No IPR available	PANTHER	PTHR12875:SF0	GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOG	coord: 4..124 score: 5.9E-48coord: 141..156 score: 5.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g04280	Cucsa.120720	Cucumber (Gy14) v1	cgycpeB0286
Cp4.1LG12g04280	CmaCh17G004970	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g04280	CmaCh08G008580	Cucurbita maxima (Rimu)	cmacpeB904
Cp4.1LG12g04280	CmoCh08G008270	Cucurbita moschata (Rifu)	cmocpeB840
Cp4.1LG12g04280	CmoCh17G004690	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g04280	Cla006679	Watermelon (97103) v1	cpewmB155
Cp4.1LG12g04280	Csa6G108520	Cucumber (Chinese Long) v2	cpecuB152
Cp4.1LG12g04280	MELO3C022239	Melon (DHL92) v3.5.1	cpemeB112
Cp4.1LG12g04280	ClCG06G002910	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g04280	CSPI06G08670	Wild cucumber (PI 183967)	cpecpiB154
Cp4.1LG12g04280	Lsi09G016410	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g04280	MELO3C022239.2	Melon (DHL92) v3.6.1	cpemedB138
Cp4.1LG12g04280	CsaV3_6G009040	Cucumber (Chinese Long) v3	cpecucB0176
Cp4.1LG12g04280	Bhi12G001927	Wax gourd	cpewgoB0174
Cp4.1LG12g04280	CsGy6G008770	Cucumber (Gy14) v2	cgybcpeB732
Cp4.1LG12g04280	Carg26668	Silver-seed gourd	carcpeB1250
Cp4.1LG12g04280	Carg13874	Silver-seed gourd	carcpeB0850

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g04280	Cp4.1LG17g03980	Cucurbita pepo (Zucchini)	cpecpeB159

The following block(s) are covering this gene:

None