Cp4.1LG12g04170 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g04170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	mRNA, clone: RTFL01-46-D12
Location	Cp4.1LG12 : 3183611 .. 3187152 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATTTGTAATGGGAATTTCCGTGAAAAATATCAGCCTATGGATCGAAGTTTCATTTGCGTAAGAAGAAGATTGAAAATGAAGCTTCATGTACGAATAAATTCCCTTTTCACTCTAATTCAGATGGCTTATCAACAATTTACACTTCTTCTTCTTCTTCTTCTTCTTCTTCGATGGCTTTCAAATCGCCTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTGCTTCTGTGGAACAGAAATCCAGAGTTTAGATACCAAAGCTCCGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGGTGAGTTTACGTAACACTTGATTTTGTATTTTTGGTTTCTGTTGTGTGAATTCTCTAGGGCTTTATTTTTCTTGTGGATTTGGTGTATATATAGGAAGACATGAAATCTGGACTAGAATCGTTCATTTCTTGGTATATTTGCACGCACATGGATACATAAAGCTCCTTCAGTTTTCCTCTGCCAATTTGTATCCCTCAGTTAATCAAAAGCAAGATGGAAGATTCCAAATTAGTTACTCATCTTCATATTCCCTTTGACAGAGGCAGAGCCTGATGTTTTCTTGCTTTAGGGATAGCCAAAATTTTACATCTCTTATATATATATATATATATATACACACACACACACATATGCCAACCCCACAGCCCAAACTTTGGAGATTTCAAGGGTTTTTCTTATGAAGCTCATTTGAAATCAGTCTAATGGGCAAATTGCACCCTTCCTCCTCCCTTTCTGGCTGTGCCATGCTTCTTGAAACCAACGAGTCGGTTGGGGTCACTAAGCTCGGAAGGGGGTGGATTGTGAGGTCCCACCTCGGTTGAGGAGGAGAACGAAACATTCTTTATGAGGGTGTGAAAACTTCTCCCCTTGTAGATGCGTTTTAAAAATCTTAAGGGAAAACCTGAAAGAGAAATTCCAAAGAAGACAATATCTGCTAGTGATGGCCTGAGTTGTTACACCTACGATGAGACATCTCTCTGTCTTTTCAGGTGCTTGCAAGTCTTTTATGAAACAAATTCATCAAAAGAAAGGGAAAAGAACCCCACTTCAAAGAGTTACACAAAGACTCTACAATTGGGTAAAATGAGTATCTCTCAATTTGGATAAAAGAGATGAGAAACTATATAAATGAAAAGGAGAGAACATTTACACTAATTGTGTAACGGCCAAAGTCCACCGCTAGCAGATATTGTTCTTTCTGGGCTTTCCCTCGAGACTTTAAAACGCGTATGCTAGGAGAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTTCCCAACTAACGTGGGACTCTCACAAAGATCACAAATTCTTTGATTCCCTTCTTGCCAAGTTACTCAAAGTAACACCCTAGTAAGTGCATCCACAAGACTGTTTTTCCTTTTGATGTTATATGAAGCTTTCTGTTTACCATTTTTACCTCATTCTTGAATTTAGAATTTCTTGATTAAATTTGTTCATATGAAATTATGGGAACGATAAAAAGTTCTTATGGAGTTGCAATCTTTATCAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTAGTTTGAAGGTACAAATCAGGGATGCCTTGCCTCTTTAATGACTATTTGTTTATCTCAACAAGTTCTTTTATTCATCTTTTTTGGTCACAGAAACAAAACTTCCTTTGACAATGAAAGCTTACAACATAAATAGCATCTAATAAAGAAAATTTTGATACATCTCAAAAGAAACCCAAAAGTTCAACAAAAGAGTCAAGAGTTATAGAATAACTTAGAAACAAACATCAACACAAACATTGAAACTTGGCCAAGTCCCTGACCTTCCTCTAATCTCTGAACTTTTCATTATGATTCCTATTATTTCTTTCTAACCAAACTGTCAAACGTGTTTTGATTGCATTTGAATCATATTGTTCTTCATTGTGCTGATCAATATCCAAAAAAACGTGAAAGTTTCCAAAATCACCTGCTATATAATCACAAAACAGAAGTAAAGGTTCAAATTTCTCCTGATTTTCGGCGTAAAACCTACCAACTGAGCTGTAAGGACATATTTGGATCTCCTTCACAACATTTTAGCTGTATTTATACATTCAAGGCAAGAAGACCAGCAGAACAGTTTAAATATTATTGAAATAAATGGATATAACCCAATCATCTTTCTTTGTTGTATGTTTTTTCTTGGAAGTTCTTTTTTTCAAGGATCGCCGTTTCATTCAGGGTCTGGTAGTTTCATTGTGTCTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGGTTTGTAATATAGTCTGACAAATTTAGTTACTATGTGTTATTGAGATAACGAAATTGTAATATAGTCTGACCAATCTGTAATAGCCCAAGTCCACCGCTAGCCGAGGTTGTCCTTTTTGGATTTTCTCTTTTGGACTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTTGTGAGAGGTTTCCACACCTTTGTAAATAATACTTTGTTCTTTTCTCAACTGACGTGGGATCTCACAATCCACTTCCCTTAGGGACCAGCATCCTTGCTGGCACATTGCTCGATTTCTGGCTCTAATACCATTTGTAACAAAGTATTCCTTGTAAGGGTATGGAAACCTCTTCCTAGCAGACACGTTTTAAAATCTTGAGGGGTAGTTCAGAAGGAAAAGCTCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGGACACCTTATTTCCGTCTCCCTTCTCCCTCAGGACATGGAGTGCCTACTTTATTATAATTATTGTTTTGTTTCTTATTTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAATACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTCGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGCTCAGATTGCATGAATTTCGTGGCTTCAACACCTTCTGCTCCGCGCTTTTACCCAAACTTTTATTTAACCTAAATTGTGATATCTTCTTTGCTTCTACTTTTAACCTATATTTACTTCTTGTCTAGTTCCTAAACATATATGTTTATACTCTTGTAGTGTTATCTTTACTCCCGGTAAATTACTTATATCGTTTTATCCTTATTCATGGTAAACTTTTCTTTACTTAAACTTCTTATTGTCTTGTCTTATCTTTATTTATTGTGAAGCTTTCCTTACTTAGACTT

mRNA sequence

TGAATTTGTAATGGGAATTTCCGTGAAAAATATCAGCCTATGGATCGAAGTTTCATTTGCGTAAGAAGAAGATTGAAAATGAAGCTTCATGTACGAATAAATTCCCTTTTCACTCTAATTCAGATGGCTTATCAACAATTTACACTTCTTCTTCTTCTTCTTCTTCTTCTTCGATGGCTTTCAAATCGCCTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTGCTTCTGTGGAACAGAAATCCAGAGTTTAGATACCAAAGCTCCGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTAGTTTGAAGGGTCTGGTAGTTTCATTGTGTCTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAATACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTCGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGCTCAGATTGCATGAATTTCGTGGCTTCAACACCTTCTGCTCCGCGCTTTTACCCAAACTTTTATTTAACCTAAATTGTGATATCTTCTTTGCTTCTACTTTTAACCTATATTTACTTCTTGTCTAGTTCCTAAACATATATGTTTATACTCTTGTAGTGTTATCTTTACTCCCGGTAAATTACTTATATCGTTTTATCCTTATTCATGGTAAACTTTTCTTTACTTAAACTTCTTATTGTCTTGTCTTATCTTTATTTATTGTGAAGCTTTCCTTACTTAGACTT

Coding sequence (CDS)

ATGGCTTTCAAATCGCCTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTGCTTCTGTGGAACAGAAATCCAGAGTTTAGATACCAAAGCTCCGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTAGTTTGAAGGGTCTGGTAGTTTCATTGTGTCTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAATACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTCGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGCTCAGATTGCATGA

Protein sequence

MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVTALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA

Homology

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BLAST of Cp4.1LG12g04170 vs. TrEMBL
Match: A0A0A0KFP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108540 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.6e-74
Identity = 156/233 (66.95%), Postives = 188/233 (80.69%), Query Frame = 1


Query: 1   MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++    +      G EI++L T  P     FDLGPVPS  EVDAAVT
Sbjct: 1   MAFKSSSQVLSTSHSTDNTSNSLRHGGREIETLPTPFPN----FDLGPVPSAVEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLC 120
           AL+SLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY+LL KGF+W+L DP+ KGLV+SLC
Sbjct: 61  ALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLRKGFKWILIDPTFKGLVISLC 120

Query: 121 LDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELI 180
           LDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK G++ G+VILSWILQMS +KI EL+
Sbjct: 121 LDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELL 180

Query: 181 QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA 234
           +NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+R QIA
Sbjct: 181 ENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228

[Close]

BLAST of Cp4.1LG12g04170 vs. TrEMBL
Match: A0A061DUF9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005630 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.0e-37
Identity = 98/229 (42.79%), Postives = 135/229 (58.95%), Query Frame = 1


Query: 7   PVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPK----SLHKFDLGPVPSRAEVDAAVTAL 66
           P  +S+ + C  + C+       ++++D K  K    S + F LGPVPS+ EV+ AV AL
Sbjct: 47  PSTASSSSTCHGEICR------RLEAVDGKENKTATGSFNNFVLGPVPSKPEVEDAVAAL 106

Query: 67  QSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLD 126
           Q+ +    S     KWLQPL++S DS    S+G       F  LL +PS+K LVV+L  D
Sbjct: 107 QNFIHRVSSSTPQMKWLQPLLDSCDSRRWQSQGLGRAYDAFSLLLKEPSVKRLVVALSSD 166

Query: 127 KNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQN 186
           K +WDAI+ N +V KL ELP     NG   +S   AD+G VIL WIL M+  KI EL+  
Sbjct: 167 KALWDAIRKNELVRKLCELPHPAVENGRACNSTVEADLGKVILQWILDMTKAKITELVMK 226

Query: 187 FVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQ 232
           F  LLN  F   G EK   E R+++DE I+SS +LS++I+LIV+V+R Q
Sbjct: 227 FQSLLNEVFQTRGSEKPDEETRDQLDETIRSSLLLSIVILLIVIVARVQ 269

[Close]

BLAST of Cp4.1LG12g04170 vs. TrEMBL
Match: A0A0D2TBP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G087400 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-32
Identity = 93/229 (40.61%), Postives = 134/229 (58.52%), Query Frame = 1


Query: 7   PVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPK----SLHKFDLGPVPSRAEVDAAVTAL 66
           P  SS+ ++C  + CK       ++ +D    K    S + F LGPVPS+ EV+ A+ AL
Sbjct: 47  PSSSSSSSSCQNEICK------RLEVVDGNENKIGTGSFNNFILGPVPSKPEVETALAAL 106

Query: 67  QSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLD 126
            + +    S     KWL+PL++S  S  L  +G   +  GF  LLT+PS+K LVVS+  D
Sbjct: 107 HNYIHGISSSTPEFKWLKPLLDSCHSRGLLCQGLGRVYDGFILLLTEPSVKRLVVSISSD 166

Query: 127 KNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQN 186
           K VWDAIKNN +V KL +LP     NG  G+S   A+  + IL WIL  +  K+ EL+  
Sbjct: 167 KAVWDAIKNNELVRKLLDLPLPAVENGRPGNSSGEAEPDNDILQWILDFAKAKVTELVLK 226

Query: 187 FVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQ 232
           F  LLN  F    +EK   E R +++E+I+SS +LS++I+LIV+V+R Q
Sbjct: 227 FQSLLNEVFRSGKREKPNEETRGQLEEEIRSSLILSIVILLIVIVARVQ 269

[Close]

BLAST of Cp4.1LG12g04170 vs. TrEMBL
Match: M5XP28_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023094mg PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.3e-25
Identity = 83/222 (37.39%), Postives = 127/222 (57.21%), Query Frame = 1


Query: 24  CFCGTE--------IQSLDTKAPKSLHKFDLGPVPSRAEVDAAVTALQSLLQEYFSIESL 83
           CFCG+E            D +A  S      GPVPS+ EV  A+TAL + +Q   S +  
Sbjct: 47  CFCGSESCRKLELAYGKEDKRASGSNLSSVFGPVPSQFEVQNAITALLNFMQGITSSQPE 106

Query: 84  SKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLDKNVWDAIKNNGIV 143
            +WLQ +++   +  L S G + + + FQ L TDP +K LVVSL  DK +W+A+ NN +V
Sbjct: 107 FQWLQQILDCCVTRKLLSYGQRRVHEAFQLLQTDPCVKRLVVSLSSDKALWEAVTNNELV 166

Query: 144 EKLQE-----LPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQNFVVLLNNA 203
           +KLQE     LPSSE       + +P  ++ + I+ WI+ ++  KI +LI+ F  L+N  
Sbjct: 167 KKLQEPIFLGLPSSE-------NEEP--ELSTRIMRWIMDVTKAKIMQLIETFQSLVNEM 226

Query: 204 FL---FPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSR 230
           FL    P  E   A+  ++ + K++SS +LS++I+LIVVV+R
Sbjct: 227 FLPPETPPSENPTADDEDQFEAKVRSSLLLSVVILLIVVVTR 259

[Close]

BLAST of Cp4.1LG12g04170 vs. TrEMBL
Match: A0A151R374_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_041891 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 76/188 (40.43%), Postives = 113/188 (60.11%), Query Frame = 1


Query: 48  PVPSRAEVDAAVTALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLL 107
           PVPS+ EV  A+++LQ    E+    S S  +Q +  SY   I++S GY+ L   FQ L 
Sbjct: 50  PVPSQREVQDAMSSLQ----EFMRAASSSSTVQQISGSYGQRIVNSHGYKRLYDAFQLLQ 109

Query: 108 TDPSLKGLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGA----DIGSV 167
            DP++K LVVSL  DK +WDA+ +  + +KL ELP S      + S +P      +IG  
Sbjct: 110 DDPAIKRLVVSLSSDKALWDAVMSKVLHQKLLELPDS------VESRRPQIPELNEIGIH 169

Query: 168 ILSWILQMSLTKIWELIQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIML 227
           +LSW L +   KI ELI++F  L+N+ F     E    +   E+DEK++SSF+LS++I+L
Sbjct: 170 VLSWTLDIIKGKILELIESFQSLVNDLFQCSRMENTTTDDATELDEKVRSSFLLSIVILL 227

Query: 228 IVVVSRAQ 232
           IV+V+R+Q
Sbjct: 230 IVIVARSQ 227

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BLAST of Cp4.1LG12g04170 vs. TAIR10
Match: AT4G25170.2 (AT4G25170.2 Uncharacterised conserved protein (UCP012943))

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12
Identity = 49/167 (29.34%), Postives = 87/167 (52.10%), Query Frame = 1


Query: 71  SIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLDKNVWDAIK 130
           S  S S W++P ++   S  L    Y  +   F  L T+PS++ +VVSL  DK VW+A+ 
Sbjct: 191 SFGSDSDWMEPSMHLCHSRTLKPHAYDQVYNAFDLLRTEPSVQKMVVSLSSDKAVWEAVM 250

Query: 131 NNGIVEKLQELPSS--EGGNGNLGSSKPGADIGSVILSWILQMSLTKIWEL---IQNFVV 190
           NN +V ++++L ++       N   +    +  +  + W+   ++ K  E+   I   V 
Sbjct: 251 NNDVVREIRDLYNNGISQDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVKITKVVT 310

Query: 191 LLNNAFLFPG--KEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRA 231
            L N +   G   +   A+    ++EK+ +S +LS+I+ML+V+VSRA
Sbjct: 311 ELFNCYNGDGVNNKGKDAKFNNWLEEKLTTSVLLSIIVMLVVMVSRA 357

[Close]

BLAST of Cp4.1LG12g04170 vs. TAIR10
Match: AT5G61490.1 (AT5G61490.1 Uncharacterised conserved protein (UCP012943))

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 56/190 (29.47%), Postives = 98/190 (51.58%), Query Frame = 1


Query: 50  PSRAEVDAAVTALQSLLQEYFSIES---LSK-----WLQPLVNSYDSSILHSRGYQLLCK 109
           P   EVD A +ALQ +  +    ES   LS+     W++P +   ++S+L       L  
Sbjct: 75  PELDEVDDAFSALQLMFNDDDDEESGDQLSESEFVDWIEPSLQLCNTSLLQPFMLDRLYD 134

Query: 110 GFQWLLTDPSLKGLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIG 169
            F    TDPS++ +V+SL  DK VWDA+ NN +V +L  + ++E    + GS+       
Sbjct: 135 AFHVFQTDPSVQRMVMSLTSDKAVWDAVMNNEVVREL--ISNAERSEEDSGSA------- 194

Query: 170 SVILSWILQMSLTKIWELIQNFVVLLNNAF-LFPGKEK-LKAEKREEIDEKIQSSFVLSL 229
           +  L  + + S  KI + ++     + + F + PG E  + A       EK+Q + +L++
Sbjct: 195 ANFLRRLFERSAVKIMDAMERVTKYVTDLFNVVPGDETVVLASGAAPKMEKLQMTVLLAI 254

[Close]

BLAST of Cp4.1LG12g04170 vs. NCBI nr
Match: gi|659119571|ref|XP_008459730.1| (PREDICTED: uncharacterized protein LOC103498772 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 170/233 (72.96%), Postives = 195/233 (83.69%), Query Frame = 1


Query: 1   MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++ G +T  S   G EI++L T  P     FDLGPVPS  EV+AAV 
Sbjct: 1   MAFKSSSEVLSTSHSTG-NTSNSLRHGREIEALPTPFPN----FDLGPVPSPLEVEAAVA 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLC 120
           ALQSLLQE+FS+ES+SKWLQPL+NS  SSILHSRGYQLLCKGFQW+LTDP+ KGLV+SLC
Sbjct: 61  ALQSLLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFKGLVISLC 120

Query: 121 LDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELI 180
           LDK+VW+AI+N+GIVEKLQELPSS GGNGN GSSK G D G+VILSWILQ+SLTKI ELI
Sbjct: 121 LDKDVWNAIRNHGIVEKLQELPSS-GGNGNTGSSKQGPDFGNVILSWILQISLTKIRELI 180

Query: 181 QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA 234
           +NFV LLNNAF FPGKEKLK EK++EIDEKIQSS VLSL++MLIVVV+R QIA
Sbjct: 181 ENFVSLLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

[Close]

BLAST of Cp4.1LG12g04170 vs. NCBI nr
Match: gi|449445465|ref|XP_004140493.1| (PREDICTED: uncharacterized protein LOC101205732 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 5.2e-74
Identity = 156/233 (66.95%), Postives = 188/233 (80.69%), Query Frame = 1


Query: 1   MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++    +      G EI++L T  P     FDLGPVPS  EVDAAVT
Sbjct: 1   MAFKSSSQVLSTSHSTDNTSNSLRHGGREIETLPTPFPN----FDLGPVPSAVEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLC 120
           AL+SLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY+LL KGF+W+L DP+ KGLV+SLC
Sbjct: 61  ALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLRKGFKWILIDPTFKGLVISLC 120

Query: 121 LDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELI 180
           LDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK G++ G+VILSWILQMS +KI EL+
Sbjct: 121 LDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFSKIRELL 180

Query: 181 QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA 234
           +NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+R QIA
Sbjct: 181 ENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228

[Close]

BLAST of Cp4.1LG12g04170 vs. NCBI nr
Match: gi|590723559|ref|XP_007052218.1| (Uncharacterized protein TCM_005630 [Theobroma cacao])

HSP 1 Score: 162.5 bits (410), Expect = 8.6e-37
Identity = 98/229 (42.79%), Postives = 135/229 (58.95%), Query Frame = 1


Query: 7   PVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPK----SLHKFDLGPVPSRAEVDAAVTAL 66
           P  +S+ + C  + C+       ++++D K  K    S + F LGPVPS+ EV+ AV AL
Sbjct: 47  PSTASSSSTCHGEICR------RLEAVDGKENKTATGSFNNFVLGPVPSKPEVEDAVAAL 106

Query: 67  QSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLD 126
           Q+ +    S     KWLQPL++S DS    S+G       F  LL +PS+K LVV+L  D
Sbjct: 107 QNFIHRVSSSTPQMKWLQPLLDSCDSRRWQSQGLGRAYDAFSLLLKEPSVKRLVVALSSD 166

Query: 127 KNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQN 186
           K +WDAI+ N +V KL ELP     NG   +S   AD+G VIL WIL M+  KI EL+  
Sbjct: 167 KALWDAIRKNELVRKLCELPHPAVENGRACNSTVEADLGKVILQWILDMTKAKITELVMK 226

Query: 187 FVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQ 232
           F  LLN  F   G EK   E R+++DE I+SS +LS++I+LIV+V+R Q
Sbjct: 227 FQSLLNEVFQTRGSEKPDEETRDQLDETIRSSLLLSIVILLIVIVARVQ 269

[Close]

BLAST of Cp4.1LG12g04170 vs. NCBI nr
Match: gi|823186007|ref|XP_012489718.1| (PREDICTED: uncharacterized protein LOC105802559 [Gossypium raimondii])

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 93/229 (40.61%), Postives = 134/229 (58.52%), Query Frame = 1


Query: 7   PVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPK----SLHKFDLGPVPSRAEVDAAVTAL 66
           P  SS+ ++C  + CK       ++ +D    K    S + F LGPVPS+ EV+ A+ AL
Sbjct: 47  PSSSSSSSSCQNEICK------RLEVVDGNENKIGTGSFNNFILGPVPSKPEVETALAAL 106

Query: 67  QSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSLCLD 126
            + +    S     KWL+PL++S  S  L  +G   +  GF  LLT+PS+K LVVS+  D
Sbjct: 107 HNYIHGISSSTPEFKWLKPLLDSCHSRGLLCQGLGRVYDGFILLLTEPSVKRLVVSISSD 166

Query: 127 KNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELIQN 186
           K VWDAIKNN +V KL +LP     NG  G+S   A+  + IL WIL  +  K+ EL+  
Sbjct: 167 KAVWDAIKNNELVRKLLDLPLPAVENGRPGNSSGEAEPDNDILQWILDFAKAKVTELVLK 226

Query: 187 FVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQ 232
           F  LLN  F    +EK   E R +++E+I+SS +LS++I+LIV+V+R Q
Sbjct: 227 FQSLLNEVFRSGKREKPNEETRGQLEEEIRSSLILSIVILLIVIVARVQ 269

[Close]

BLAST of Cp4.1LG12g04170 vs. NCBI nr
Match: gi|694395786|ref|XP_009373201.1| (PREDICTED: uncharacterized protein LOC103962244 [Pyrus x bretschneideri])

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 92/238 (38.66%), Postives = 137/238 (57.56%), Query Frame = 1


Query: 6   PPVVSSTCNNCGCD----TCKSCFCGTEIQSLDTKAPK-SLHKFDLGPVPSRAEVDAAVT 65
           P   S T + C CD    TC+        Q  D +A + SL     GPVPSR EV+ A+ 
Sbjct: 38  PITPSCTGSYCFCDSGSETCRK-------QEQDKRASRTSLLSSVFGPVPSRFEVENAIL 97

Query: 66  ALQSLLQEYFSIE-SLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLKGLVVSL 125
           AL S LQ   S   S  +WLQP+++S  +  L S G+  +   FQ L TDPS+K +VVSL
Sbjct: 98  ALLSFLQGITSSSHSELQWLQPILDSCVTRKLLSYGHGKVYDAFQSLQTDPSVKRMVVSL 157

Query: 126 CLDKNVWDAIKNNGIVEKLQELPSSE----GGNGNL-GSSKPGADIGSVILSWILQMSLT 185
             D+ +WDA+ NN +V+KL+E PSS+    G  G L  SS    +    ++ WI+ ++  
Sbjct: 158 SSDRALWDAVTNNELVKKLREPPSSDLSVCGNEGLLPQSSNQEPEFAKRVMRWIMDITRA 217

Query: 186 KIWELIQNFVVLLNNAFLFPGKEKLK---AEKREEIDEKIQSSFVLSLIIMLIVVVSR 230
           K+ ELI+ F  L+ + FL P   + K   A  +++ +EK++SS +L+++I+LIVVV+R
Sbjct: 218 KVMELIEQFQSLVTDIFLPPETLQEKNPTANDKDQFEEKVRSSLLLTVVILLIVVVAR 268

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04170 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g04170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFP6_CUCSA	3.6e-74	66.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108540 PE=4 SV=1	[more]
A0A061DUF9_THECC	6.0e-37	42.79	Uncharacterized protein OS=Theobroma cacao GN=TCM_005630 PE=4 SV=1	[more]
A0A0D2TBP1_GOSRA	1.5e-32	40.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G087400 PE=4 SV=1	[more]
M5XP28_PRUPE	5.3e-25	37.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023094mg PE=4 SV=1	[more]
A0A151R374_CAJCA	1.5e-24	40.43	Uncharacterized protein OS=Cajanus cajan GN=KK1_041891 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g04170 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25170.2	3.5e-12	29.34	Uncharacterised conserved protein (UCP012943)	[more]
AT5G61490.1	1.1e-10	29.47	Uncharacterised conserved protein (UCP012943)	[more]

BLAST of Cp4.1LG12g04170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119571\|ref\|XP_008459730.1\|	1.8e-82	72.96	PREDICTED: uncharacterized protein LOC103498772 [Cucumis melo]	[more]
gi\|449445465\|ref\|XP_004140493.1\|	5.2e-74	66.95	PREDICTED: uncharacterized protein LOC101205732 [Cucumis sativus]	[more]
gi\|590723559\|ref\|XP_007052218.1\|	8.6e-37	42.79	Uncharacterized protein TCM_005630 [Theobroma cacao]	[more]
gi\|823186007\|ref\|XP_012489718.1\|	2.2e-32	40.61	PREDICTED: uncharacterized protein LOC105802559 [Gossypium raimondii]	[more]
gi\|694395786\|ref\|XP_009373201.1\|	1.2e-25	38.66	PREDICTED: uncharacterized protein LOC103962244 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04170.1	Cp4.1LG12g04170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33625	FAMILY NOT NAMED	coord: 46..233 score: 1.5
None	No IPR available	PANTHER	PTHR33625:SF2	SUBFAMILY NOT NAMED	coord: 46..233 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g04170	Cucsa.120700	Cucumber (Gy14) v1	cgycpeB0286
Cp4.1LG12g04170	CmaCh17G004950	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g04170	CmoCh17G004660	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g04170	Cla006676	Watermelon (97103) v1	cpewmB155
Cp4.1LG12g04170	Csa6G108540	Cucumber (Chinese Long) v2	cpecuB152
Cp4.1LG12g04170	MELO3C022236	Melon (DHL92) v3.5.1	cpemeB112
Cp4.1LG12g04170	ClCG06G002940	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g04170	CSPI06G08690	Wild cucumber (PI 183967)	cpecpiB154
Cp4.1LG12g04170	Lsi09G016380	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g04170	MELO3C022236.2	Melon (DHL92) v3.6.1	cpemedB138
Cp4.1LG12g04170	CsaV3_6G009060	Cucumber (Chinese Long) v3	cpecucB0176
Cp4.1LG12g04170	Bhi12G001925	Wax gourd	cpewgoB0174
Cp4.1LG12g04170	CsGy6G008790	Cucumber (Gy14) v2	cgybcpeB732
Cp4.1LG12g04170	Carg26666	Silver-seed gourd	carcpeB1250

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g04170	Silver-seed gourd	carcpeB0850
Cp4.1LG12g04170	Cucurbita pepo (Zucchini)	cpecpeB159
Cp4.1LG12g04170	Cucurbita maxima (Rimu)	cmacpeB904
Cp4.1LG12g04170	Cucurbita moschata (Rifu)	cmocpeB840