Cp4.1LG12g03900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g03900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein BPS1, chloroplastic
LocationCp4.1LG12 : 2767587 .. 2768588 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGACCACAGGAACCACACAGACAGTTTTTCCCCTTTGGGAATCCTTTCCGCACGATATCTCCCAAAGGTTCGAATTTTTCTTCAAAACTCACCGCAATATTGAATGATTTTGAGAGAAACCTTGCTGAAAGATTAAGAAAGCTCCATCCATCTAGTAAGGATGATGTTCTTAGCCTTTCTTGGATGATATTAGCTATGGAGTTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTAGAGCTCCCTGTGACTGATTGGAACGAGAAATGGATCGATGTCTATTTGGACATCAGTGTGAAATTACTCGACGTCTGCAACGTTGTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGAGTCTGCAGACTCAAAGCGTCTCACCCGAGCCTGTGCTTCCTTAGATGAATGGAGACTGAACATTAGCACGACAAACTCTAGAATTAAGAATTGTTGTGTAATCTTAGACAGCCTTGTAGAATCTCTTGATCTTCCAAAAGTTAAGAACTCAGCCAAGGGTAAGGTTCTAATGCACGCATTGTACGGGGTCAAGGTACAGACAGTTTTCGTGTGCAGTGTCTTTGCCTCAACCTTCTTAGGTTCCCCAAAACTCTTCGATCTGAAAATTGCCGCTACATATTCGTGGGGACAAACTTTCTCCTCCTTGCAAAGTGATGTAAATAGTGAAATTAGAAGTATATACTCCCATGGAAAGTTTACCCCTCTGAAGGAGCTTGAAGCTATTGATCAATGTGTGGGCAAGCTTCATCAAATGATCCCAGAGAATCCTGAAGTCGAAGAAGTTCAACCGCTGAAGAACGTCATATCCGAGTTGGGAGGAAAGGCAGAGAAACTATCAGAAGGTGTACATTTGCTGTCGAAGGAAGTCGACAACTTTTTCCAGATTGTTTTGGCAGGGCGTGATGCATTGCTTTCAAACCTAAGGAAGGGTTAG

mRNA sequence

ATGAGCCGACCACAGGAACCACACAGACAGTTTTTCCCCTTTGGGAATCCTTTCCGCACGATATCTCCCAAAGGTTCGAATTTTTCTTCAAAACTCACCGCAATATTGAATGATTTTGAGAGAAACCTTGCTGAAAGATTAAGAAAGCTCCATCCATCTAGTAAGGATGATGTTCTTAGCCTTTCTTGGATGATATTAGCTATGGAGTTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTAGAGCTCCCTGTGACTGATTGGAACGAGAAATGGATCGATGTCTATTTGGACATCAGTGTGAAATTACTCGACGTCTGCAACGTTGTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGAGTCTGCAGACTCAAAGCGTCTCACCCGAGCCTGTGCTTCCTTAGATGAATGGAGACTGAACATTAGCACGACAAACTCTAGAATTAAGAATTGTTGTGTAATCTTAGACAGCCTTGTAGAATCTCTTGATCTTCCAAAAGTTAAGAACTCAGCCAAGGGTAAGGTTCTAATGCACGCATTGTACGGGGTCAAGGTACAGACAGTTTTCGTGTGCAGTGTCTTTGCCTCAACCTTCTTAGGTTCCCCAAAACTCTTCGATCTGAAAATTGCCGCTACATATTCGTGGGGACAAACTTTCTCCTCCTTGCAAAGTGATGTAAATAGTGAAATTAGAAGTATATACTCCCATGGAAAGTTTACCCCTCTGAAGGAGCTTGAAGCTATTGATCAATGTGTGGGCAAGCTTCATCAAATGATCCCAGAGAATCCTGAAGTCGAAGAAGTTCAACCGCTGAAGAACGTCATATCCGAGTTGGGAGGAAAGGCAGAGAAACTATCAGAAGGTGTACATTTGCTGTCGAAGGAAGTCGACAACTTTTTCCAGATTGTTTTGGCAGGGCGTGATGCATTGCTTTCAAACCTAAGGAAGGGTTAG

Coding sequence (CDS)

ATGAGCCGACCACAGGAACCACACAGACAGTTTTTCCCCTTTGGGAATCCTTTCCGCACGATATCTCCCAAAGGTTCGAATTTTTCTTCAAAACTCACCGCAATATTGAATGATTTTGAGAGAAACCTTGCTGAAAGATTAAGAAAGCTCCATCCATCTAGTAAGGATGATGTTCTTAGCCTTTCTTGGATGATATTAGCTATGGAGTTGCTTTGTGAAACTCACAGTGATGTTAAAAATCTTATCAAGGAGTTAGAGCTCCCTGTGACTGATTGGAACGAGAAATGGATCGATGTCTATTTGGACATCAGTGTGAAATTACTCGACGTCTGCAACGTTGTTAGCTCAGAGCTTTCACACTTGAACCAAAGCAACCTCATGCTCCGATGCATCACCCATAATTTGGAGTCTGCAGACTCAAAGCGTCTCACCCGAGCCTGTGCTTCCTTAGATGAATGGAGACTGAACATTAGCACGACAAACTCTAGAATTAAGAATTGTTGTGTAATCTTAGACAGCCTTGTAGAATCTCTTGATCTTCCAAAAGTTAAGAACTCAGCCAAGGGTAAGGTTCTAATGCACGCATTGTACGGGGTCAAGGTACAGACAGTTTTCGTGTGCAGTGTCTTTGCCTCAACCTTCTTAGGTTCCCCAAAACTCTTCGATCTGAAAATTGCCGCTACATATTCGTGGGGACAAACTTTCTCCTCCTTGCAAAGTGATGTAAATAGTGAAATTAGAAGTATATACTCCCATGGAAAGTTTACCCCTCTGAAGGAGCTTGAAGCTATTGATCAATGTGTGGGCAAGCTTCATCAAATGATCCCAGAGAATCCTGAAGTCGAAGAAGTTCAACCGCTGAAGAACGTCATATCCGAGTTGGGAGGAAAGGCAGAGAAACTATCAGAAGGTGTACATTTGCTGTCGAAGGAAGTCGACAACTTTTTCCAGATTGTTTTGGCAGGGCGTGATGCATTGCTTTCAAACCTAAGGAAGGGTTAG

Protein sequence

MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLSLSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSHLNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDLPKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPKLFDLKIAATYSWGQTFSSLQSDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAEKLSEGVHLLSKEVDNFFQIVLAGRDALLSNLRKG
Homology
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BLAST of Cp4.1LG12g03900 vs. Swiss-Prot
Match: BPS1_ARATH (Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-91
Identity = 177/333 (53.15%), Postives = 239/333 (71.77%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           M+RPQ+P R FFPFGNPF+ +S K S  SSKL  +LN+FE NLA  + KL P  K D+L+
Sbjct: 1   MARPQDPPRGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDILT 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           +SWM  AME LCETH+ +K LI +LELPV+DW +KW+DVYLDISVKLLD+CN  SSEL+ 
Sbjct: 61  VSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L+L+   HNLE+   + L++A +SLD W+ +I + N RI+NC  IL SLV++L+L
Sbjct: 121 LNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLNL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGKVLM ALYGVKV+T+++  VFA+ F GS + L  L ++    W Q+F  +Q
Sbjct: 181 PKVKNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFMEVQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENP-EVEEVQPLKNVISELGGKA 300
           + +N+EI++I+     T LKELEA+   V KL+  I +   +   +QPLK+ ++EL    
Sbjct: 241 NTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTEL---- 300

Query: 301 EKLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
              S G+ L+SKEVD FF+I+L+GRD LL NLR
Sbjct: 301 ---SNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

[Close]
BLAST of Cp4.1LG12g03900 vs. Swiss-Prot
Match: U496D_ORYSJ (UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.9e-64
Identity = 134/297 (45.12%), Postives = 183/297 (61.62%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSR     R FFP GNPFR + P G++ S KL  +L  +E  LA  LRKL P +  DVL+
Sbjct: 1   MSRAHGSPRSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLT 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LA++ L E H+++ NLI +LELPV+DW++KW+D+YL+ SVKLLD+C  +SSELS 
Sbjct: 61  LSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSR 120

Query: 121 LNQSNLMLRCITHNLES----ADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVE 180
           L+Q  L+L+   H L S       ++L RA  SL EW   +    +R+ +C   L  L  
Sbjct: 121 LDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELAG 180

Query: 181 SLDLPKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTF 240
           +L L KVKNSAKGKVLM ALYG++  TVFVCS+F +   GSPK L +L +   + W Q F
Sbjct: 181 NLSLMKVKNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAF 240

Query: 241 SSLQSDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVIS 293
           + L + V+ E+    S G    +KELE ++ C  +LH +   +   EE   L N +S
Sbjct: 241 NDLHTAVSEELTRQLSGGSVAAVKELEEVEACARRLHVLASTSQLEEEAANLANAVS 297

[Close]
BLAST of Cp4.1LG12g03900 vs. Swiss-Prot
Match: U496D_ORYSI (UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 7.7e-63
Identity = 132/297 (44.44%), Postives = 181/297 (60.94%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSR     R FFP GNPFR + P G++ S KL  +L  +E  LA  LRKL P +  DVL+
Sbjct: 1   MSRAHGSPRSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLT 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LA++ L E H+++ NLI +LELPV+DW++KW+D+YL+ SVKLLD+C  +SSELS 
Sbjct: 61  LSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSR 120

Query: 121 LNQSNLMLRCITHNLES----ADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVE 180
           L+Q  L+L+   H L S       ++L RA  SL EW   +     R+ +C   L  L  
Sbjct: 121 LDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCPRLVSCSATLQELAG 180

Query: 181 SLDLPKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTF 240
           +L L KVKNS KGKVLM ALYG++  TVFVCS+F +   GSPK L +L +   + W Q F
Sbjct: 181 NLSLMKVKNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAF 240

Query: 241 SSLQSDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVIS 293
           + L + V+ E+    + G    +KELE ++ C  +LH +   +   EE   L N +S
Sbjct: 241 NDLHTAVSEELTRQLAGGSVAAVKELEEVEACAKRLHVLASTSQLEEEAANLANAVS 297

[Close]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match: A0A0A0K878_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006740 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 2.6e-150
Identity = 275/327 (84.10%), Postives = 293/327 (89.60%), Query Frame = 1 

Query: 5   QEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLSLSWM 64
           + P RQFFPFGNPFR  SPKGSN  SKL  ILN FER+LAERL+KLHPS +DDVLSLSWM
Sbjct: 6   EPPRRQFFPFGNPFRMRSPKGSNLPSKLVDILNAFERSLAERLQKLHPSGEDDVLSLSWM 65

Query: 65  ILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSHLNQS 124
           ILAMELLCETHSDVKNLIKEL+LPV DWNEK IDVYLDISVKLLDVCN +SSELSHLNQS
Sbjct: 66  ILAMELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNALSSELSHLNQS 125

Query: 125 NLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDLPKVK 184
           NLMLRC+ HNL+SADS+RL RA  SL EWR NI+TT+SRIK+CCVILDSLVESLDLPK+K
Sbjct: 126 NLMLRCVIHNLDSADSERLARARTSLKEWRQNITTTSSRIKSCCVILDSLVESLDLPKIK 185

Query: 185 NSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPKLFDLKIAATYSWGQTFSSLQSDVNS 244
           NSAKGKVLM ALYGVKVQTVFVCSVFAS FL SPKLFDL IA TY WGQTFSSLQ+DVNS
Sbjct: 186 NSAKGKVLMQALYGVKVQTVFVCSVFASAFLSSPKLFDLDIANTYLWGQTFSSLQNDVNS 245

Query: 245 EIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAEKLSEG 304
           EIRSIY+ GKFTPLKELEAIDQCVGKL QMIPE PEVEE Q LKN ISELGGK EKLS+ 
Sbjct: 246 EIRSIYARGKFTPLKELEAIDQCVGKLQQMIPEKPEVEEAQLLKNSISELGGKTEKLSKD 305

Query: 305 VHLLSKEVDNFFQIVLAGRDALLSNLR 332
           +H L+KEVDNFFQIVLAGRDALLSNLR
Sbjct: 306 LHSLTKEVDNFFQIVLAGRDALLSNLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match: M5X0G6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007896mg PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-112
Identity = 211/334 (63.17%), Postives = 255/334 (76.35%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR FF FGNPFR ISPKGS+ S KL A+LN FE  LA RLRKL+P  KDDVLS
Sbjct: 1   MSRPQEPHRPFFHFGNPFRMISPKGSHLSPKLVALLNTFEETLAGRLRKLNPKDKDDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LAME LC TH+D+K LI E++LPV+DW+EKWIDVYLDISVKLLDVC   SSE+S 
Sbjct: 61  LSWMKLAMESLCGTHNDIKTLISEIDLPVSDWDEKWIDVYLDISVKLLDVCIAFSSEISR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L L+C+ HNL+S  S +  RA +SLD WR +I + N R++NC  ILD LVESLDL
Sbjct: 121 LNQGHLFLQCVLHNLDSTSSNQFIRARSSLDGWRHHIGSKNPRVENCSTILDKLVESLDL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGS-PKLFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGK+LM A+YGVKV TV VCSVFA+ F GS  KL DL +A TY W Q F+  Q
Sbjct: 181 PKVKNSAKGKLLMRAMYGVKVLTVSVCSVFAAAFSGSAKKLLDLNVAETYLWAQAFNDFQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
            +VN EIR+++S G+F  LKELEA+D  V +L+  I +   + E +  ++ IS+L  KA+
Sbjct: 241 GNVNGEIRNVFSSGRFMVLKELEAVDGIVKELYPKIQDGVGLAEGKEFRSSISDLESKAQ 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLRKG 334
           KLS+G+ LL+KEVD FFQI+L GRDALLS LR G
Sbjct: 301 KLSQGLDLLTKEVDGFFQILLTGRDALLSKLRSG 334

[Close]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match: F6I657_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02020 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108
Identity = 203/332 (61.14%), Postives = 251/332 (75.60%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR  FPFGNPFR I PKGS  S +L ++LNDFE  LAERLRKL P   +DVLS
Sbjct: 76  MSRPQEPHRPSFPFGNPFRMILPKGSYLSPRLLSLLNDFENTLAERLRKLKPKGTEDVLS 135

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
            SWM LAMELLCE H D+K LI +LELPV DW++KWIDVYLD SVKLLD+C  +SSELS 
Sbjct: 136 CSWMKLAMELLCEIHKDIKILITDLELPVCDWDDKWIDVYLDNSVKLLDICIALSSELSR 195

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L+L+C+  NL++A  K+L RA +SLD WR +I + N +++NC  ILDSL ES++L
Sbjct: 196 LNQGHLLLQCVLRNLDTASPKQLVRARSSLDSWRQHIGSKNPKLQNCLTILDSLAESINL 255

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSP-KLFDLKIAATYSWGQTFSSLQ 240
           PK+KNSAKGKVLM A+YGV+V TVFVCSVFA+ F GS  KL DL +A T+ W + F+ LQ
Sbjct: 256 PKIKNSAKGKVLMRAMYGVRVGTVFVCSVFAAAFTGSANKLIDLHVADTFLWSEAFTDLQ 315

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           S VN EIR+ +S G+ T LKELEA+D  + KL+ M+ +     E    +N +S+LG   E
Sbjct: 316 SYVNVEIRNTFSSGRVTVLKELEAVDTSINKLYPMVQDGVGPAEDGTFQNSVSDLGKSVE 375

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
           KLSEG+ LL+K+VD FFQ+VL GRDALL NLR
Sbjct: 376 KLSEGLDLLTKDVDGFFQMVLTGRDALLCNLR 407

[Close]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match: B9RDW6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1616310 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 203/333 (60.96%), Postives = 253/333 (75.98%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MS PQEPHR FF FGNPFR +SPKGS  + +L ++LN FE  L ERL+KL P  KDDVLS
Sbjct: 1   MSTPQEPHRPFFSFGNPFRMMSPKGSQLTPRLLSLLNAFEETLVERLKKLIPKDKDDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           L+WM  AME LCETH+D+K LI +LELPV +W+EKWIDVYLDISVKLLD+C   SSELS 
Sbjct: 61  LTWMKSAMESLCETHTDIKTLITDLELPVANWDEKWIDVYLDISVKLLDICIAFSSELSR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L+L+C+ HNLES  SK+  RA ASLD WR +IS+ N R++NC  IL++L  SL+L
Sbjct: 121 LNQGHLLLQCVLHNLESNTSKQFVRASASLDSWRQHISSKNQRVENCRSILENLRGSLNL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGKVLM A+YGVKVQTVF+CSVFA+ F  S K L  L ++ T  W Q FS LQ
Sbjct: 181 PKVKNSAKGKVLMRAMYGVKVQTVFLCSVFAAAFSNSSKNLLVLDVSDTIKWAQAFSDLQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           +++N EIR  + HGKFT LKEL+A+D  V KL+ MI +     EV+  +N +S+L   +E
Sbjct: 241 TNLNVEIREKFCHGKFTVLKELDAVDSIVKKLYPMIQDGVGPVEVEAFENSVSDLRKGSE 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLRK 333
           KLS+G+ LL+K+VD FF+IVL+GRDALL  LR+
Sbjct: 301 KLSQGLDLLAKQVDGFFKIVLSGRDALLCKLRE 333

[Close]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match: B9GQC2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16410g PE=4 SV=2)

HSP 1 Score: 396.7 bits (1018), Expect = 2.7e-107
Identity = 205/332 (61.75%), Postives = 247/332 (74.40%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR FFPFGNPFR +S KGS  S +L ++LN FE  LA RLRKL+P  K DVLS
Sbjct: 1   MSRPQEPHRPFFPFGNPFRMLSSKGSQLSPRLLSLLNAFEDALAARLRKLNPKDKYDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           L+WM LAME LCETH+D+K L  EL+LPVTDW+EKWIDVYLDISVKLLD+C   SSEL  
Sbjct: 61  LAWMKLAMESLCETHTDIKTLTTELDLPVTDWDEKWIDVYLDISVKLLDICVAFSSELLR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +LML+C  HNLES  S++L RA +S+D WR +I + N R++NC  ILD LV+SL L
Sbjct: 121 LNQGHLMLQCALHNLESNTSEKLVRARSSIDSWRQHIGSKNPRLENCKSILDGLVDSLSL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGKVLM A+YGVK+ TVFVCSV A+ F G+ K L DL +A T  W Q FS LQ
Sbjct: 181 PKVKNSAKGKVLMQAMYGVKIHTVFVCSVLATVFSGNSKNLLDLDVANTTMWVQAFSDLQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           ++VN  IR I+S  KFT LKEL+ +D  V  L+ MI +     E +   N  S+LG +AE
Sbjct: 241 TNVNGGIRDIFSQRKFTALKELDEVDTAVKNLYPMIQDGTRPIEAEAFSNSFSDLGRRAE 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
           KLS+G+  L+K VD FF+IVL+GRDALL NLR
Sbjct: 301 KLSQGLDFLTKVVDGFFKIVLSGRDALLCNLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. TAIR10
Match: AT2G46080.1 (AT2G46080.1 Protein BYPASS related (InterPro:IPR008511))

HSP 1 Score: 374.8 bits (961), Expect = 5.6e-104
Identity = 188/332 (56.63%), Postives = 248/332 (74.70%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQ+P R FFPFGNPFR +S KGS+ S  L ++LN FE  L ERL+KL P +KDD+L+
Sbjct: 1   MSRPQDPPRGFFPFGNPFRMLSSKGSDLSPWLLSLLNGFELRLEERLKKLMPKNKDDILT 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LAME LCETH ++  LI +L+LPV+DW EKW+DVYL+ISV+LLD+CN  SSEL+ 
Sbjct: 61  LSWMKLAMESLCETHKNINTLITDLQLPVSDWEEKWVDVYLNISVRLLDLCNAFSSELTR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L L+C+ HNL+S   ++  +A +SLD WR +++T N RI+NC  +LDSLV+SL L
Sbjct: 121 LNQGDLFLKCVLHNLQSDSGEKYLQARSSLDSWRQHVNTNNPRIENCRAVLDSLVKSLSL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNS KGKVLM A YGVKVQTV++CSVF + +  S K LFDL ++    W + F+ +Q
Sbjct: 181 PKVKNSPKGKVLMRAFYGVKVQTVYICSVFTAAWSDSTKDLFDLPVSEKPLWAKVFTDMQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           S VN+EIR + S G+ T LKELE++D  V KL+ MI +  +  EV+  K+ + ELG +AE
Sbjct: 241 SVVNAEIRDMLSSGRTTILKELESVDASVEKLYPMIQDGVDPVEVEFFKDNVMELGTQAE 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
           KLS+G+  L +EVD+FF++ L GRD LL NLR
Sbjct: 301 KLSQGLDQLLEEVDSFFKLTLRGRDVLLCNLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. TAIR10
Match: AT1G01550.1 (AT1G01550.1 Protein of unknown function (DUF793))

HSP 1 Score: 337.8 bits (865), Expect = 7.6e-93
Identity = 177/333 (53.15%), Postives = 239/333 (71.77%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           M+RPQ+P R FFPFGNPF+ +S K S  SSKL  +LN+FE NLA  + KL P  K D+L+
Sbjct: 1   MARPQDPPRGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDILT 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           +SWM  AME LCETH+ +K LI +LELPV+DW +KW+DVYLDISVKLLD+CN  SSEL+ 
Sbjct: 61  VSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L+L+   HNLE+   + L++A +SLD W+ +I + N RI+NC  IL SLV++L+L
Sbjct: 121 LNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLNL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGKVLM ALYGVKV+T+++  VFA+ F GS + L  L ++    W Q+F  +Q
Sbjct: 181 PKVKNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFMEVQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENP-EVEEVQPLKNVISELGGKA 300
           + +N+EI++I+     T LKELEA+   V KL+  I +   +   +QPLK+ ++EL    
Sbjct: 241 NTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTEL---- 300

Query: 301 EKLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
              S G+ L+SKEVD FF+I+L+GRD LL NLR
Sbjct: 301 ---SNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

[Close]
BLAST of Cp4.1LG12g03900 vs. TAIR10
Match: AT4G01360.1 (AT4G01360.1 unknown protein)

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-52
Identity = 128/329 (38.91%), Postives = 194/329 (58.97%), Query Frame = 1 

Query: 16  NPFRTISPKGSN--FSSKLTAILNDFERNLAERLRKLHPSSKDDVLSLSWMILAMELLCE 75
           NPF+ +  K +N   S KL ++LN+FE NL   +R+L P  K+D++S+SWMI AM+ LCE
Sbjct: 10  NPFKILFTKKNNARLSPKLLSLLNNFETNLTVSIRELVPKDKNDIVSVSWMIQAMQSLCE 69

Query: 76  THSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSHLNQSNLMLRCITH 135
           TH  ++ L+K+LE+PV+D  E +I ++ D S+K  ++CN  +SE+ HL   NL+L+    
Sbjct: 70  THKSIRTLVKDLEVPVSDLEENFIYIFSDFSLK-RELCNAFTSEIYHLEHGNLLLKFAFS 129

Query: 136 NLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLD-------LPKVKNS 195
            LE+     L R       W  ++ + N  I+N   +L  LVES+D         K K S
Sbjct: 130 KLETNSGNILQR-------WNQHMVSKNPSIENWGAVLSRLVESMDHHHHISKKGKKKYS 189

Query: 196 AKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYS---WGQTFSSLQSDV 255
           A+GKVL+  LYGVKV+T+++ SVF ++F GS K LF L I        W Q F  LQ+ +
Sbjct: 190 AEGKVLLRVLYGVKVKTLYIFSVFDASFSGSSKNLFYLTIPKEMEELPWVQAFMELQNTI 249

Query: 256 NSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPE-NPEVEEVQPLKNVISELGGKAEKL 315
           N EI++ +    FT +K+LEA++  V KL+  + E +  +  V+PL+  + E       L
Sbjct: 250 NPEIKNTFLSDGFTVIKDLEAVETGVKKLYTAVQEGSVPILLVEPLEKSVIE-------L 309

Query: 316 SEGVHLLSKEVDNFFQIVLAGRDALLSNL 331
           SE   L+SKE     ++V++ RDALL +L
Sbjct: 310 SERFELVSKETRCLSKMVISARDALLESL 323

[Close]
BLAST of Cp4.1LG12g03900 vs. TAIR10
Match: AT3G61500.2 (AT3G61500.2 unknown protein)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 1 

Query: 31  KLTAILNDFERNLAERLRKLHPSSKDDVLSLSWMILAMELLCETHSDVKNLIKELELPVT 90
           K   +LN+FE +L ERL+KL P + D++L+L WMILAMELL +TH+D+  LI +L+L   
Sbjct: 25  KKNLLLNNFESSLTERLKKLIPQNTDEILTLPWMILAMELLYDTHNDINILITDLKLHYM 84

Query: 91  DWNEK--WIDVYLDISVKLLDVCNVVSSELSHLNQSNLMLRCITHNLESADSKRLTRACA 150
             +E   W + Y++I+ KLLD+CN   S L H+N   + L+ + H LE       T  C+
Sbjct: 85  TDSEHGYWFENYMNINTKLLDLCNAFMSLLRHMNHGIVCLKFLRHKLEMKSEDLCTEICS 144

Query: 151 SLDEWRLNISTTNSRIKNCCVILDSLVESLDLPK 183
           +LD WR NI+   + I  C  +L   VESL+  K
Sbjct: 145 ALDSWRENIT---AEISKCREVLGRYVESLNFHK 175

[Close]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match: gi|659116634|ref|XP_008458175.1| (PREDICTED: protein BPS1, chloroplastic [Cucumis melo])

HSP 1 Score: 552.0 bits (1421), Expect = 7.2e-154
Identity = 284/332 (85.54%), Postives = 302/332 (90.96%), Query Frame = 1 

Query: 1   MSRPQEP-HRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVL 60
           MSR +EP +RQFFPFGNPFR  SPKGSN  SKL  ILN FER+LAERL+KLHPSS+DDVL
Sbjct: 1   MSRLREPPNRQFFPFGNPFRMRSPKGSNLPSKLVDILNAFERSLAERLQKLHPSSEDDVL 60

Query: 61  SLSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELS 120
           SLSWMILAMELLCETHSDVKNLIKEL+LPV DWNEK IDVYLDISVKLLDVCN VSSELS
Sbjct: 61  SLSWMILAMELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNAVSSELS 120

Query: 121 HLNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLD 180
           HLNQSNLMLRC+ HNL+SADS+RLTRA  SL+EWR NISTT+SRIKNCCVILDSLVESLD
Sbjct: 121 HLNQSNLMLRCVIHNLDSADSERLTRARTSLEEWRQNISTTSSRIKNCCVILDSLVESLD 180

Query: 181 LPKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPKLFDLKIAATYSWGQTFSSLQ 240
           LPK+KNSAKGKVLM ALYGVKVQTVFVCSVFAS FL SPKLFDL IA TY WGQTFSSLQ
Sbjct: 181 LPKIKNSAKGKVLMRALYGVKVQTVFVCSVFASAFLSSPKLFDLDIANTYLWGQTFSSLQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           +DVNSEIR+IY+ GKFTPLKELEAIDQCVGKLHQMIPE PEVE+ Q LKN ISELGGK E
Sbjct: 241 NDVNSEIRNIYTSGKFTPLKELEAIDQCVGKLHQMIPEKPEVEDAQLLKNSISELGGKTE 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
           KLSE +H L+KEVDNFFQIVLAGRDALLSNLR
Sbjct: 301 KLSEDLHSLTKEVDNFFQIVLAGRDALLSNLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match: gi|449441412|ref|XP_004138476.1| (PREDICTED: protein BPS1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 3.7e-150
Identity = 275/327 (84.10%), Postives = 293/327 (89.60%), Query Frame = 1 

Query: 5   QEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLSLSWM 64
           + P RQFFPFGNPFR  SPKGSN  SKL  ILN FER+LAERL+KLHPS +DDVLSLSWM
Sbjct: 6   EPPRRQFFPFGNPFRMRSPKGSNLPSKLVDILNAFERSLAERLQKLHPSGEDDVLSLSWM 65

Query: 65  ILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSHLNQS 124
           ILAMELLCETHSDVKNLIKEL+LPV DWNEK IDVYLDISVKLLDVCN +SSELSHLNQS
Sbjct: 66  ILAMELLCETHSDVKNLIKELDLPVPDWNEKLIDVYLDISVKLLDVCNALSSELSHLNQS 125

Query: 125 NLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDLPKVK 184
           NLMLRC+ HNL+SADS+RL RA  SL EWR NI+TT+SRIK+CCVILDSLVESLDLPK+K
Sbjct: 126 NLMLRCVIHNLDSADSERLARARTSLKEWRQNITTTSSRIKSCCVILDSLVESLDLPKIK 185

Query: 185 NSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPKLFDLKIAATYSWGQTFSSLQSDVNS 244
           NSAKGKVLM ALYGVKVQTVFVCSVFAS FL SPKLFDL IA TY WGQTFSSLQ+DVNS
Sbjct: 186 NSAKGKVLMQALYGVKVQTVFVCSVFASAFLSSPKLFDLDIANTYLWGQTFSSLQNDVNS 245

Query: 245 EIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAEKLSEG 304
           EIRSIY+ GKFTPLKELEAIDQCVGKL QMIPE PEVEE Q LKN ISELGGK EKLS+ 
Sbjct: 246 EIRSIYARGKFTPLKELEAIDQCVGKLQQMIPEKPEVEEAQLLKNSISELGGKTEKLSKD 305

Query: 305 VHLLSKEVDNFFQIVLAGRDALLSNLR 332
           +H L+KEVDNFFQIVLAGRDALLSNLR
Sbjct: 306 LHSLTKEVDNFFQIVLAGRDALLSNLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match: gi|802694994|ref|XP_012083325.1| (PREDICTED: protein BPS1, chloroplastic [Jatropha curcas])

HSP 1 Score: 414.8 bits (1065), Expect = 1.4e-112
Identity = 212/332 (63.86%), Postives = 259/332 (78.01%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR FF FGNPFR ISPKGS  S +L ++LN FE  LAERLRKL+P  K+DVLS
Sbjct: 1   MSRPQEPHRPFFSFGNPFRMISPKGSQLSPRLLSLLNAFEETLAERLRKLNPKDKNDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           L+WM LAME LCETH+D+K LI  LELPVTDW+EKWID+YLDISVKLLD+C   SSEL+ 
Sbjct: 61  LTWMKLAMETLCETHADIKTLITNLELPVTDWDEKWIDLYLDISVKLLDICIAFSSELAR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L+L+C+ HNLES  SK+  RA +SLD WR +IS+ N+RI+NC  ILD LV SL+L
Sbjct: 121 LNQGHLLLQCVLHNLESDASKQFVRARSSLDSWRQHISSKNTRIQNCRSILDDLVRSLNL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGSPK-LFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGKVLM A+YGVKVQTVFVCSVFA+ F GS K L DL +  T  W Q +S+LQ
Sbjct: 181 PKVKNSAKGKVLMRAMYGVKVQTVFVCSVFAAAFSGSSKNLSDLDVPDTILWAQAYSNLQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
           ++VN EIR I+S GKFT LKEL+A+D    KL+ +I +  +  EV+  KN +S+L   AE
Sbjct: 241 TNVNMEIREIFSSGKFTVLKELDAVDLIAKKLYPLIQDGVQAVEVEAFKNSVSDLKKGAE 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLR 332
           KLS+G+ LL+  VD FF++VL+GRDALL +LR
Sbjct: 301 KLSQGLDLLANGVDGFFKVVLSGRDALLCSLR 332

[Close]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match: gi|596002099|ref|XP_007218220.1| (hypothetical protein PRUPE_ppa007896mg [Prunus persica])

HSP 1 Score: 414.1 bits (1063), Expect = 2.4e-112
Identity = 211/334 (63.17%), Postives = 255/334 (76.35%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR FF FGNPFR ISPKGS+ S KL A+LN FE  LA RLRKL+P  KDDVLS
Sbjct: 1   MSRPQEPHRPFFHFGNPFRMISPKGSHLSPKLVALLNTFEETLAGRLRKLNPKDKDDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LAME LC TH+D+K LI E++LPV+DW+EKWIDVYLDISVKLLDVC   SSE+S 
Sbjct: 61  LSWMKLAMESLCGTHNDIKTLISEIDLPVSDWDEKWIDVYLDISVKLLDVCIAFSSEISR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L L+C+ HNL+S  S +  RA +SLD WR +I + N R++NC  ILD LVESLDL
Sbjct: 121 LNQGHLFLQCVLHNLDSTSSNQFIRARSSLDGWRHHIGSKNPRVENCSTILDKLVESLDL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGS-PKLFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGK+LM A+YGVKV TV VCSVFA+ F GS  KL DL +A TY W Q F+  Q
Sbjct: 181 PKVKNSAKGKLLMRAMYGVKVLTVSVCSVFAAAFSGSAKKLLDLNVAETYLWAQAFNDFQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
            +VN EIR+++S G+F  LKELEA+D  V +L+  I +   + E +  ++ IS+L  KA+
Sbjct: 241 GNVNGEIRNVFSSGRFMVLKELEAVDGIVKELYPKIQDGVGLAEGKEFRSSISDLESKAQ 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLRKG 334
           KLS+G+ LL+KEVD FFQI+L GRDALLS LR G
Sbjct: 301 KLSQGLDLLTKEVDGFFQILLTGRDALLSKLRSG 334

[Close]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match: gi|657968556|ref|XP_008375979.1| (PREDICTED: protein BPS1, chloroplastic-like [Malus domestica])

HSP 1 Score: 409.5 bits (1051), Expect = 5.8e-111
Identity = 208/334 (62.28%), Postives = 254/334 (76.05%), Query Frame = 1 

Query: 1   MSRPQEPHRQFFPFGNPFRTISPKGSNFSSKLTAILNDFERNLAERLRKLHPSSKDDVLS 60
           MSRPQEPHR FF FGNPF+ I+PKGS  S +L  +LN FE  LA RLRKL+P  KDDVLS
Sbjct: 1   MSRPQEPHRPFFHFGNPFKMIAPKGSQLSPRLLGLLNTFEETLAGRLRKLNPKDKDDVLS 60

Query: 61  LSWMILAMELLCETHSDVKNLIKELELPVTDWNEKWIDVYLDISVKLLDVCNVVSSELSH 120
           LSWM LAME LC TH+D+K+LI E++LPV++W+EKWIDVYLDISVKLLDVC   SSE+S 
Sbjct: 61  LSWMKLAMESLCGTHNDIKSLIAEIDLPVSNWDEKWIDVYLDISVKLLDVCIAFSSEISR 120

Query: 121 LNQSNLMLRCITHNLESADSKRLTRACASLDEWRLNISTTNSRIKNCCVILDSLVESLDL 180
           LNQ +L L+C+ HNL+S  S +  RA +SLD WR +I +TN R++NC  ILD LVESLDL
Sbjct: 121 LNQGHLYLQCVLHNLDSTSSDQFIRARSSLDGWRHHIGSTNPRVENCSTILDKLVESLDL 180

Query: 181 PKVKNSAKGKVLMHALYGVKVQTVFVCSVFASTFLGS-PKLFDLKIAATYSWGQTFSSLQ 240
           PKVKNSAKGK+LM A+YGVKV TV VCSVFA+ F GS  KL DL +A TY W Q F+ LQ
Sbjct: 181 PKVKNSAKGKLLMRAMYGVKVLTVSVCSVFAAAFSGSAKKLLDLNVAETYLWAQAFNDLQ 240

Query: 241 SDVNSEIRSIYSHGKFTPLKELEAIDQCVGKLHQMIPENPEVEEVQPLKNVISELGGKAE 300
            +VN EIR+++S G+   LKELEA+D  V +L+  I +   + E    KN +S+L  KA+
Sbjct: 241 GNVNGEIRNVFSSGRVMVLKELEAVDDVVKELYPKIQDGVGLAEGNTFKNSVSDLDRKAQ 300

Query: 301 KLSEGVHLLSKEVDNFFQIVLAGRDALLSNLRKG 334
           KLS+G+ LL+KEVD FFQI+LAGRD LLS LR G
Sbjct: 301 KLSQGLDLLTKEVDGFFQILLAGRDTLLSKLRSG 334

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g03900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BPS1_ARATH1.3e-9153.15Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1[more]
U496D_ORYSJ6.9e-6445.12UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300 PE=2 SV=1[more]
U496D_ORYSI7.7e-6344.44UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3 SV=2[more]
BLAST of Cp4.1LG12g03900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K878_CUCSA2.6e-15084.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006740 PE=4 SV=1[more]
M5X0G6_PRUPE1.6e-11263.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007896mg PE=4 SV=1[more]
F6I657_VITVI1.1e-10861.14Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02020 PE=4 SV=... [more]
B9RDW6_RICCO1.6e-10760.96Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1616310 PE=4 SV=1[more]
B9GQC2_POPTR2.7e-10761.75Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16410g PE=4 SV=2[more]
BLAST of Cp4.1LG12g03900 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46080.15.6e-10456.63 Protein BYPASS related (InterPro:IPR008511)[more]
AT1G01550.17.6e-9353.15 Protein of unknown function (DUF793)[more]
AT4G01360.16.5e-5238.91 unknown protein[more]
AT3G61500.23.2e-2742.21 unknown protein[more]
BLAST of Cp4.1LG12g03900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116634|ref|XP_008458175.1|7.2e-15485.54PREDICTED: protein BPS1, chloroplastic [Cucumis melo][more]
gi|449441412|ref|XP_004138476.1|3.7e-15084.10PREDICTED: protein BPS1, chloroplastic-like [Cucumis sativus][more]
gi|802694994|ref|XP_012083325.1|1.4e-11263.86PREDICTED: protein BPS1, chloroplastic [Jatropha curcas][more]
gi|596002099|ref|XP_007218220.1|2.4e-11263.17hypothetical protein PRUPE_ppa007896mg [Prunus persica][more]
gi|657968556|ref|XP_008375979.1|5.8e-11162.28PREDICTED: protein BPS1, chloroplastic-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008511Protein_BYPASS-related
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g03900.1Cp4.1LG12g03900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008511Protein BYPASS-relatedPFAMPF05633DUF793coord: 33..138
score: 3.
NoneNo IPR availablePANTHERPTHR31509FAMILY NOT NAMEDcoord: 1..331
score: 4.4E
NoneNo IPR availablePANTHERPTHR31509:SF3BYPASS1-RELATED PROTEIN-RELATEDcoord: 1..331
score: 4.4E