Cp4.1LG12g03260 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTCTTTAGCTCGGTCCGATTTGCACTTTGTTGTGTTCTTTTCTTTGGAGTCGTTCTTTCGCATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCGTTATGCTGGCAATTGTTGAAACCAGTGAGAAACTTAGATGCCGTTGGCGTAACTAATTACACCCTCAACCTTACACATACGAGCACCATTGAATGTCTCCACCACACACAACGGCTTGAGGCGGAAGAGACAACCAATCTAGAGCTTAAGAATCGATATTCAGATTGTTCAAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACCTATATTGTCGCCGATGTTTGTATCATGGGAGCCTCGGTCAATATAGGCGTATGTCTAGATAAATTAAATCAGCCACCACTAGAACCGTCAACTCTTCTAAAGGACATCAAGAATCTTCATGATATTTTTGACATTACCTCTGGTCTGGTGCATCTTCTTGCTGGAAATGATTTTTGA ATGGGTGTCTTTAGCTCGGTCCGATTTGCACTTTGTTGTGTTCTTTTCTTTGGAGTCGTTCTTTCGCATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCGTTATGCTGGCAATTGTTGAAACCAGTGAGAAACTTAGATGCCGTTGGCGTAACTAATTACACCCTCAACCTTACACATACGAGCACCATTGAATGTCTCCACCACACACAACGGCTTGAGGCGGAAGAGACAACCAATCTAGAGCTTAAGAATCGATATTCAGATTGTTCAAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACCTATATTGTCGCCGATGTTTGTATCATGGGAGCCTCGGTCAATATAGGCGTATGTCTAGATAAATTAAATCAGCCACCACTAGAACCGTCAACTCTTCTAAAGGACATCAAGAATCTTCATGATATTTTTGACATTACCTCTGGTCTGGTGCATCTTCTTGCTGGAAATGATTTTTGA ATGGGTGTCTTTAGCTCGGTCCGATTTGCACTTTGTTGTGTTCTTTTCTTTGGAGTCGTTCTTTCGCATGCAGACACAACGCCCCAAAACAACACTGTATCGATCATCTGTCACGATGCCAATAACCCATCGTTATGCTGGCAATTGTTGAAACCAGTGAGAAACTTAGATGCCGTTGGCGTAACTAATTACACCCTCAACCTTACACATACGAGCACCATTGAATGTCTCCACCACACACAACGGCTTGAGGCGGAAGAGACAACCAATCTAGAGCTTAAGAATCGATATTCAGATTGTTCAAAACACATAAACTCTTCGTTGCCCGACGTAGAAACTGCTCAATATTGCATGGGTTATCATACCTATATTGTCGCCGATGTTTGTATCATGGGAGCCTCGGTCAATATAGGCGTATGTCTAGATAAATTAAATCAGCCACCACTAGAACCGTCAACTCTTCTAAAGGACATCAAGAATCTTCATGATATTTTTGACATTACCTCTGGTCTGGTGCATCTTCTTGCTGGAAATGATTTTTGA MGVFSSVRFALCCVLFFGVVLSHADTTPQNNTVSIICHDANNPSLCWQLLKPVRNLDAVGVTNYTLNLTHTSTIECLHHTQRLEAEETTNLELKNRYSDCSKHINSSLPDVETAQYCMGYHTYIVADVCIMGASVNIGVCLDKLNQPPLEPSTLLKDIKNLHDIFDITSGLVHLLAGNDF
BLAST of Cp4.1LG12g03260 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07 Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.4e-22 Identity = 70/177 (39.55%), Postives = 92/177 (51.98%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15 Identity = 56/161 (34.78%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.0e-15 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 7.0e-09 Identity = 52/173 (30.06%), Postives = 82/173 (47.40%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. NCBI nr
Match: gi|659117599|ref|XP_008458686.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 71/177 (40.11%), Postives = 95/177 (53.67%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. NCBI nr
Match: gi|449461001|ref|XP_004148232.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 70/177 (39.55%), Postives = 92/177 (51.98%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. NCBI nr
Match: gi|659113905|ref|XP_008456811.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 99.0 bits (245), Expect = 9.1e-18 Identity = 61/166 (36.75%), Postives = 91/166 (54.82%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 94.7 bits (234), Expect = 1.7e-16 Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 1
BLAST of Cp4.1LG12g03260 vs. NCBI nr
Match: gi|659113897|ref|XP_008456805.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 93.2 bits (230), Expect = 5.0e-16 Identity = 60/166 (36.14%), Postives = 89/166 (53.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |