Cp4.1LG12g03250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTCTTCAGCCATGTCCAATTTTCCCTTTGTTGTGTTCTTTTCTTCGGTGTCGTTCTTTCGCATGCAGACACAACGTCCCAAAACGACACTGTATCGACTGTCTGCCCCCAAACCAAAAACCCATCTTTATGCCGGCAATTGTTGAAACCTGTGAGAAAATTAAATGCCATAAAGATGGCCGATCACATGCTCCACCTTGCACATACGAGCGCTGTCGAATGTCGCCGCCGCGCACAACAGCTCGAGGCAGAAGAGACAGCTAATCTAAAGCTTAAGAAACGATATTCAGAATGCTCAGAATCCATAGACTCTTCGGTGAACGCCATAGAGTTTGGCAAACAATACTTGGCCCTTGGTGGCTATATTGTCGTCACAGTTCAAGTCATCGGTGCCACGAACGATGTTGACCAATGTCTAGATACCTTCAATCAGCCGCCGCCAGAACCGTCGTCACTACCAAGGAACGTCAAGAATCTTAGAGATATTTGTGACATTGCCTCATATGTGGCGCATACTCTCGCCCGAGATGATTACTGA ATGGGTGTCTTCAGCCATGTCCAATTTTCCCTTTGTTGTGTTCTTTTCTTCGGTGTCGTTCTTTCGCATGCAGACACAACGTCCCAAAACGACACTGTATCGACTGTCTGCCCCCAAACCAAAAACCCATCTTTATGCCGGCAATTGTTGAAACCTGTGAGAAAATTAAATGCCATAAAGATGGCCGATCACATGCTCCACCTTGCACATACGAGCGCTGTCGAATGTCGCCGCCGCGCACAACAGCTCGAGGCAGAAGAGACAGCTAATCTAAAGCTTAAGAAACGATATTCAGAATGCTCAGAATCCATAGACTCTTCGGTGAACGCCATAGAGTTTGGCAAACAATACTTGGCCCTTGGTGGCTATATTGTCGTCACAGTTCAAGTCATCGGTGCCACGAACGATGTTGACCAATGTCTAGATACCTTCAATCAGCCGCCGCCAGAACCGTCGTCACTACCAAGGAACGTCAAGAATCTTAGAGATATTTGTGACATTGCCTCATATGTGGCGCATACTCTCGCCCGAGATGATTACTGA ATGGGTGTCTTCAGCCATGTCCAATTTTCCCTTTGTTGTGTTCTTTTCTTCGGTGTCGTTCTTTCGCATGCAGACACAACGTCCCAAAACGACACTGTATCGACTGTCTGCCCCCAAACCAAAAACCCATCTTTATGCCGGCAATTGTTGAAACCTGTGAGAAAATTAAATGCCATAAAGATGGCCGATCACATGCTCCACCTTGCACATACGAGCGCTGTCGAATGTCGCCGCCGCGCACAACAGCTCGAGGCAGAAGAGACAGCTAATCTAAAGCTTAAGAAACGATATTCAGAATGCTCAGAATCCATAGACTCTTCGGTGAACGCCATAGAGTTTGGCAAACAATACTTGGCCCTTGGTGGCTATATTGTCGTCACAGTTCAAGTCATCGGTGCCACGAACGATGTTGACCAATGTCTAGATACCTTCAATCAGCCGCCGCCAGAACCGTCGTCACTACCAAGGAACGTCAAGAATCTTAGAGATATTTGTGACATTGCCTCATATGTGGCGCATACTCTCGCCCGAGATGATTACTGA MGVFSHVQFSLCCVLFFGVVLSHADTTSQNDTVSTVCPQTKNPSLCRQLLKPVRKLNAIKMADHMLHLAHTSAVECRRRAQQLEAEETANLKLKKRYSECSESIDSSVNAIEFGKQYLALGGYIVVTVQVIGATNDVDQCLDTFNQPPPEPSSLPRNVKNLRDICDIASYVAHTLARDDY
BLAST of Cp4.1LG12g03250 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13 Identity = 49/168 (29.17%), Postives = 83/168 (49.40%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.5e-31 Identity = 80/180 (44.44%), Postives = 110/180 (61.11%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17 Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17 Identity = 59/161 (36.65%), Postives = 87/161 (54.04%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.5e-15 Identity = 63/173 (36.42%), Postives = 89/173 (51.45%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. TrEMBL
Match: I1MI21_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G207000 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 37/150 (24.67%), Postives = 69/150 (46.00%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. NCBI nr
Match: gi|659117599|ref|XP_008458686.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 83/180 (46.11%), Postives = 110/180 (61.11%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. NCBI nr
Match: gi|449461001|ref|XP_004148232.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus]) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 80/180 (44.44%), Postives = 110/180 (61.11%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 116.7 bits (291), Expect = 4.2e-23 Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. NCBI nr
Match: gi|659113905|ref|XP_008456811.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1
BLAST of Cp4.1LG12g03250 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |