Cp4.1LG12g03170 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g03170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
LocationCp4.1LG12 : 2095370 .. 2101442 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCCGGGAAGCGCATGCGATCGTTTCGTCTCACTGATTTTAGCATTCAAATCGACTGCAGATTTTCGGAGTTCAATCTCTGATTTATAGAAGCAGAAACAAGAAATGGGAGGTAAATGCTTTGAGAACAGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTGTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGGTTCGTAAGCTTTCACGATCTTAATTTCTGTTAACTTCTGTGATATTCTTGATGTGATATTGTTTTGTGTTGGATCTCAATGTCAATGTGGTAACCTTAAGATGTCGATTGTTCGTTGTGCAGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTAAGATCCGTTTTATTTAGTATTAAAATCTGATCCTCGTGCTTTGATTTCACTCGACTTCTTTCTACATTTCAAATTTTCAACTCTTTGTTTTGATTTTGATTCGTTTTCGTGTATCTATTCCTTTGCTTGATGTCACTCGTTTAGGAGACCTTTGAGGTTAAATTGGTTAACAAAAATTTGTGATTCTCGAAAGATTGTTATCGTCCGTACAGGTCTTGATTCGAACAGTGGAGCACCATCTGAATTATCCAGTAGTAGAAAGAAAAGTTTTCCAGGTTTTACAGGTACCCGAATCTTCTTACGAACTCAGCTCTGTTTATCCACAAGCGAAGTCGTTCTTGAGTCCGCCTACTGTGTTTAATTTTGTTTTAAATTGAATTCTAATAATTATATTGTTATAGATCGATACCATTTGTTTAGATGTGCGTTATTTTGGGCAGTAAATGGGACATGGATTGCCAAATTATTGTTTGATACAGACTAGAACTGAACTGCCCCTTATTATGTTCCTGAATAATTTGTGTGAAGTCCAAGTTAATCTTGTCCGTAAGCTCATTTCTTCATATGATGTGCAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAGTGTTTGTAAAGGGTGATCAAGTTTTGAGTTTGTGATGAATTATTTACAGTGGTGGTCAATAAACATGTGATGATTTTTCATTTTATGGGTACATCAGGTGAAGAACGTGGGAAAGGAATCTATGCAATGGGGTCAGTATCCCTTCTCTGAATTCTTGAATACTGAACATTAATGAATGTTAAATTGTACATCTGGTTTATGTTACTTCACCAATTAGATGGATAATGGGTTGAGTGCAATTTTTTGCTTTTGTGTCTATGTACTTCACCAATTGAAACTTTTACAAGATTCTTCTCTTGGAGGTTGCTTGGCAGATTATTTCCTCTTATGTCATTTTGTATTTCACCCTAAAAAGGGTACATCGATTTAAGAATTACCAAGCTTTTGGTTTGGTGGTGTGATTTCATAGCATATTTATGCTGTTTAATTTTATTTTATTGCTCTCAGCTTTTTTTTTTCCTTCTTTTTTTTGGGTTGTAGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGGTAAGCCTTCCACCATTTACAAATAAATGTTCATTGTTTTGATCCTAAGTATGGGGTATGATTTAGAGCAGAGGCGGGCTAAAATTCTTCATGGGGAGGGATAGAACTCATCCTTTTCCGATTAGGTATGGCTTCGGCTATTCTTGAAGCCCGCCAATTAGTTAATCATAGACATATTTTAGTTAATGGTTCTATAGTGGTATCATTGCAAACCCCGAGACATTATTACAGCAAAGGATGGAAAAAAATTGAGAGCACTGATTAGTTATGTTGATTCATGAACTTCAATCAAACATTCGTTTAAAACGACGTGGTAGAAAGCAACGTGCACTTGGAAGGACATGATCTACTGTAGATTCTTACACCCACCATTTTATATTATATAGGAATGAAGATGATCTTGACTCACATCGTTTGTTCTGTGCACTAGAGCTCTACTTGAGCTCTAATTTTTTGAGGGTTTTGATGTAAATAGTACACGATTGAGCTCGAGTAGAAAGTATTGATTCATTTATCAAGGTCTGAGATCTAGGGTTAGTGTCAATCAATAAGTTAAAACTACTTCGTAAGAATATGTTCGGTATAGAAATCGAAGGGATGATCCAATTTGATCAAAGTCTATCACATGAGAAATAGGACACTCTATACAAGCACCAAAGACCCACTTAGACGTTTAGTTCTTCTGGTCTCATGTCTTGAAATCTTGATCCATTCTTTCATTCCATCCATTGCAGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTAGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATACGCCATCACTGGTGCTGCTGTATCGACCGCCGCAAATATTTTTGCTGGCATATTTTAGGTATGAGTGTGGTACCGGGGAGCCATTTGACAAATTGTGGGATGTTCTTCCTTCATGTTCATTCCGTCTTTTATTATTAAGATGACTATGATGTTCATGTTTTGGACTTGTGGTTTAATGTTTAGTTCCTTTTATCCGCTTCTGGTTGGGATAGAAAATGGTTTAACCAATAAATCTGGAAATTTGTATGATTTTAACCAATAACTGAAACCATTGGCCTTATTGGTGAAGGGCAAAATAGGCACAAGCTCATGAAAAATCTATTATTCAAAAGATTGTGGCCATATTTCTTATTTTATCTCTATTTTTTGGAAAAATTATATTTTATTTATTTATCCTCTATTTTAGTAATAGGTTATTAATAATGAACTTTAATTTGTAATTAAATTAAGCCAATGAAATGCAAATTTCCAAACCAATGAGGGTAAAGTCGTCCAAAAATCAAAATGCCTAAATTTTGAAGGAAAAAGAAACACAACAATGACAAATAAACTAATTTGAATAGCAAAATAAATAAATAAAAGTTCATTTTACTTTGTTATAGTCTAATAAATAAATAAATTAGTAAGTATTTCTTTTATAGATAGGACTAGGAAAACTTTTGAAATAAAATTGGAAATTTGAGATATTTTGTATAATTTGGCCTATTATAAATCATATCCCAAATTTACTATCATGGGTCACGGTCGTCTTTGTTGCACATTGTTGAATAAGCTCAAATTCTTTTAAACTTTTCATGAACGTGTCTTGTTGCACTCAAATTCTTTTAAACTTTTCATGAACGTGTCCATTGAGAGCTCGACCATTTCTTGAACATGTCTATTGAGAGGCAACAATCATATCAGCGAGGTGTCTTGAATATCCATCCATTTGGGTTCTATCAAGGCATGAATCCACCCGTTTTCTCAACGCATGAATCCACCCGTTCCCTCATTTCAGGTTCTGTCAAGGCATGTACCAACCTCCAACATATGGGCTGGGGTGGAATGTTTCTGGCACTATCACTGTAAGACTTATTTCAAAGGAAGTCACCTGAGACGCTTGTCTTGTAACACTTAGGTCATATTGCACAGGGGTGGTGGAGAGTTAATACTATATATTTCCTATACATTTTGAGGCATTTTTTTTTATTCTTTTGGGGAGGACACCAAATTTGAGAAACTTTCATCTTTCATATAGCGGACTTAACTCCAAAGTCACATATATAGCGGTCCTCTCTAAGCTTATCTTCAACACTTGTGTCACATCCTCTCAAACCTTTCTTATGCCTCAATTTGACTTTAATGCACACTCTTTTTGGTATGTTGCAATGCACCGTCCTCTTCGTTATCTATCATTGTTCTCATGTGGCCCGATGGGTGCCACTTGAAAATCACTATCTTGTCGGTCTACATGTCAGGGTCACAACTTATTGTCTTCATAGTATGACGACACTCTCCCCCACTTAAACTCCCACTTAAACTAGTCATTGTCATTGATAACTTACTTTAGAGACACAATCGTAGATTATGACCCACAGTGCTATCACTCCCTCCATTTTCTCATCTCCGGTATCCACATAATCACGACCATCACCTACGCCCTCCTCGGTTCTTCATCTCAGGGTCGATGCACAACACTCATCTCTTCTTCTCCCTAATCCACGCTTGTCGTCGTTGCTCCACACTCGTCTTCTCCCTAATTTCATATCTGATCCGTTCATTGTTCTAAATTTTCTGATTTTTGTTTTAATAAAGCTTGTGTTTAGCTCTGATCTGATCTGTTTTAATTTTAATTTTTGTTGGAATAAAGCAGATTTTGTCTGGGTTGTTGGTATTTCTCTATTAAAAAAAGAAAGAAATAACATAAAATAAAATAAAATATCCAAAAAAAAAAACTCCCTGTGACCCGACCCAAGCCGAATCGGGTTGGTCCAAAGAACTCCCCCAACCAAATCCGTGTAAATTGTAAACCCTACGTTCCGGCTCCTTTGCGTTCCATTCGAGATCGCCTTCTACTGCGATCCTCTTTACTTCGCATGCGAACTGGATTCCGCTTCATCTTCGATACCTAAGCAAGGTATGTTCTAACTGCGATTCCTCTACTTTCTGCTGATTTTGTGTGCGTTTGGTATCTGCAAACATCGCGTAATTTCACTCGATCTTTCGATTTCCCCTTTGGTTTACGAATCAGATCGATTAGAGTGTAAATCGGCCTTTTATTTCGATTACGATCTTTCAATCAGAAACATGAGAATTTTCTGTGATTATGTTTAAGCTATAATTTGATCTGATTTTCTCGTTTTTCCCCCTTTTAACGGTAAGTAGTGGAAACCCTAATTTTTTCTTGCTTTGTTCTTGGTAGATTTATCTGCTTGTAATTTGGGGATTTGCTATGATCTTCTTCTTTCAATTTATTTTTCGCCTGGGTTATTACATTTAGATGTTGAAGTCACGGCATGTCTTACAAGAAGGAAACCTAATACTTCCCGTTTCGTTTTCTTTTTCCGTTGTCTTCTCTTCTCTTAATGTCAATCTGCTCTTAATTTGGGAATTCGTTGCAACCTTCAATTTCTGATCGTTCCCCGCCGGTGTTTTTTTCAGATTTAGATATTGAAAAAACAAAGCATGTCTAGTAAGAAGGAAGAAAAGTCGCAAGCAGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCCAAAGGCCTTAGTCGAGCTCAGGCTGAACGAGCAGCTACGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAAAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCGGGCGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGTCGGGACACTGGACATATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAAAACCCGAAGTTGAGGATGAAGATGGCAGTCTCATTAGAGCTGGACAACCCAGATTCTGGTGATGAGGAGAAGAAGACCAAGAAGAAGCAATTGAAGAAAAAAAGTAAAAGAAAGCATCGGTCCGAACCAAAATCCAATAGCGATAGCGAGGCTTCTGTATTTGAAACTGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCTGATTCGGAGTCGGAAAGGAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGGAAGAGGAGGTACAGCTCGTCTTCTGATTCTTCTGATTCAGACTCGGAGTCTGAACCAGAGTCTGATTCTGATCATGAACGTAGTAGGAGGAAGAGTCGAAGGCACAGCAGAAAACGCTAGTCAAGGTAATCTCGATCGATTGAGTGAAGCAAATTAGAACGGTCGATGTATAATTGCAACTGTAGTCAGATTAGAGATGTGAGATCATTCAGCTTCTTGTTTTAGTCGTTCAACAACTCGAACTAGGGGACGCTCTCTGGGGGAGTGTTGTTATGGCGAATTTATGAGTTGCTTTGTGCAAACTGAAGTTTGGGCTTTTTTTTCTTCTAATAATTGAGTTTTAGCATCTTCTTCCTTAACTCTTTTTT

mRNA sequence

TACCCCGGGAAGCGCATGCGATCGTTTCGTCTCACTGATTTTAGCATTCAAATCGACTGCAGATTTTCGGAGTTCAATCTCTGATTTATAGAAGCAGAAACAAGAAATGGGAGGTAAATGCTTTGAGAACAGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTGTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTCTTGATTCGAACAGTGGAGCACCATCTGAATTATCCAGTAGTAGAAAGAAAAGTTTTCCAGGTTTTACAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAACGTGGGAAAGGAATCTATGCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTAGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATACGCCATCACTGGTGCTGCTGTATCGACCGCCGCAAATATTTTTGCTGGCATATTTTAGGTTCTGTCAAGGCATGTACCAACCTCCAACATATGGGCTGGGGTGGAATGTTTCTGGCACTATCACTGTAAGACTTATTTCAAAGGAAGTCACCTGAGACGCTTGTCTTGTAACACTTAGGTCATATTGCACAGGGGTGGTGGAGAGTTAATACTATATATTTCCTATACATTTTGAGGCATTTTTTTTTATTCTTTTGGGGAGGACACCAAATTTGAGAAACTTTCATCTTTCATATAGCGGACTTAACTCCAAAGTCACATATATAGCGGTCCTCTCTAAGCTTATCTTCAACACTTGTGTCACATCCTCTCAAACCTTTCTTATGCCTCAATTTGACTTTAATGCACACTCTTTTTGGTATGTTGCAATGCACCGTCCTCTTCGTTATCTATCATTGTTCTCATGTGGCCCGATGGGTGCCACTTGAAAATCACTATCTTGTCGGTCTACATGTCAGGGTCACAACTTATTGTCTTCATAGTATGACGACACTCTCCCCCACTTAAACTCCCACTTAAACTAGTCATTGTCATTGATAACTTACTTTAGAGACACAATCGTAGATTATGACCCACAGTGCTATCACTCCCTCCATTTTCTCATCTCCGGTATCCACATAATCACGACCATCACCTACGCCCTCCTCGGTTCTTCATCTCAGGGTCGATGCACAACACTCATCTCTTCTTCTCCCTAATCCACGCTTGTCGTCGTTGCTCCACACTCGTCTTCTCCCTAATTTCATATCTGATCCGTTCATTGTTCTAAATTTTCTGATTTTTGTTTTAATAAAGCTTGTGTTTAGCTCTGATCTGATCTGTTTTAATTTTAATTTTTGTTGGAATAAAGCAGATTTTGTCTGGGTTGTTGGTATTTCTCTATTAAAAAAAGAAAGAAATAACATAAAATAAAATAAAATATCCAAAAAAAAAAACTCCCTGTGACCCGACCCAAGCCGAATCGGGTTGGTCCAAAGAACTCCCCCAACCAAATCCGTGTAAATTGTAAACCCTACGTTCCGGCTCCTTTGCGTTCCATTCGAGATCGCCTTCTACTGCGATCCTCTTTACTTCGCATGCGAACTGGATTCCGCTTCATCTTCGATACCTAAGCAAGATTTAGATATTGAAAAAACAAAGCATGTCTAGTAAGAAGGAAGAAAAGTCGCAAGCAGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCCAAAGGCCTTAGTCGAGCTCAGGCTGAACGAGCAGCTACGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAAAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCGGGCGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGTCGGGACACTGGACATATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAAAACCCGAAGTTGAGGATGAAGATGGCAGTCTCATTAGAGCTGGACAACCCAGATTCTGGTGATGAGGAGAAGAAGACCAAGAAGAAGCAATTGAAGAAAAAAAGTAAAAGAAAGCATCGGTCCGAACCAAAATCCAATAGCGATAGCGAGGCTTCTGTATTTGAAACTGATAGTGGGTCATCATCAGTTACTGGATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCTGATTCGGAGTCGGAAAGGAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGGAAGAGGAGGTACAGCTCGTCTTCTGATTCTTCTGATTCAGACTCGGAGTCTGAACCAGAGTCTGATTCTGATCATGAACGTAGTAGGAGGAAGAGTCGAAGGCACAGCAGAAAACGCTAGTCAAGGTAATCTCGATCGATTGAGTGAAGCAAATTAGAACGGTCGATGTATAATTGCAACTGTAGTCAGATTAGAGATGTGAGATCATTCAGCTTCTTGTTTTAGTCGTTCAACAACTCGAACTAGGGGACGCTCTCTGGGGGAGTGTTGTTATGGCGAATTTATGAGTTGCTTTGTGCAAACTGAAGTTTGGGCTTTTTTTTCTTCTAATAATTGAGTTTTAGCATCTTCTTCCTTAACTCTTTTTT

Coding sequence (CDS)

ATGGGAGGTAAATGCTTTGAGAACAGTGGCGGAGGCTTCTTGTACGACTTTGGCCATCCTCTTGTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGATAGGAGCATTGCAATCTGCATCTCGAGAGGCGTATATTACGGTTGCGGGAAGTCTTGATTCGAACAGTGGAGCACCATCTGAATTATCCAGTAGTAGAAAGAAAAGTTTTCCAGGTTTTACAGGTGGAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAACGTGGGAAAGGAATCTATGCAATGGGGATTAGCTGCTGGTGTTTATTCTGGTCTCACATACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAACAGTGCAGTTGCAGGTGCCATGACGGGCGTAGCTGTAGCGCTTACATCGGACAAGCCTTCTCACGAGCATATCGTACAATACGCCATCACTGGTGCTGCTGTATCGACCGCCGCAAATATTTTTGCTGGCATATTTTAG

Protein sequence

MGGKCFENSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKKSFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF
BLAST of Cp4.1LG12g03170 vs. Swiss-Prot
Match: OP162_ARATH (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana GN=OEP162 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.0e-48
Identity = 99/159 (62.26%), Postives = 129/159 (81.13%), Query Frame = 1

Query: 14  LYDFGHPLVNRVADSFVKAAGIGALQSASREAYITV---AGSLDSNSGAPSELSSSRKKS 73
           L+D GHPL+NR+ADSFVKAAG+GALQ+ SREAY TV   AG   +N G PSE++ ++K  
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 74  FPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAVAGAM 133
           FP   G ++K SL+A+VKN GKES+QWGLAAG+YSG+TYG+ E R GAHDW+NSAVAGA+
Sbjct: 81  FPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGAL 140

Query: 134 TGVAVAL-TSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TG A+A+ TS++ SHE +VQ A+TGAA+STAAN+ + +F
Sbjct: 141 TGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

BLAST of Cp4.1LG12g03170 vs. Swiss-Prot
Match: OP161_ARATH (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.3e-14
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 1

Query: 16  DFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKKSFPGFT 75
           D G+P +N   D+F+K   +G  +S + + Y  +                          
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 76  GGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVA 135
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 136 LTSDKPSHEHIVQYAITGAAVSTAA 161
               K   + IV  AI G A++TA+
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

BLAST of Cp4.1LG12g03170 vs. Swiss-Prot
Match: OEP16_PEA (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum GN=OEP16 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.6e-14
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 1

Query: 16  DFGHPLVNRVADSFVKAAGIGALQSASREAY-ITVAGSLDSNSGAPSELSSSRKKSFPGF 75
           D G+P +N   D F+K   + A +S + + + I   GS+ SN                  
Sbjct: 20  DMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISSND----------------- 79

Query: 76  TGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAV 135
                    E  +K + KE   WG  AGVY G+ YG++  RG  DWKN+   GA+TG  V
Sbjct: 80  --------FEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALV 139

Query: 136 ALTSDKPSHEHIVQYAITGAAVSTAA 161
           +  S+    + I   AITGAA++TAA
Sbjct: 140 SAASNN-KKDKIAVDAITGAAIATAA 139

BLAST of Cp4.1LG12g03170 vs. TrEMBL
Match: A0A0A0KCC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307410 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 135/158 (85.44%), Postives = 144/158 (91.14%), Query Frame = 1

Query: 10  GGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKK 69
           GG FLYD GHPL+NRVADSFVKAAGIGALQS SREAY TVAGS+DSN   P ELSS RK+
Sbjct: 69  GGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQ 128

Query: 70  SFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 129
            FPG  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+
Sbjct: 129 RFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAV 188

Query: 130 TGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TGVAVALT+DK SHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 189 TGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 226

BLAST of Cp4.1LG12g03170 vs. TrEMBL
Match: M5XRN2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012201mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 111/158 (70.25%), Postives = 131/158 (82.91%), Query Frame = 1

Query: 11  GGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGA-PSELSSSRKK 70
           GGF +DFGHPL+NR+A+SF+KAAGIGA+Q+ SREAY T    LDS+ G  P E+S ++K 
Sbjct: 24  GGF-FDFGHPLLNRIAESFLKAAGIGAIQAVSREAYFTATEGLDSSGGGIPPEISGNKKH 83

Query: 71  SFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 130
            FP   G  N +SLEAMVK+ GKES+QWGLAAGVYSGLTYGL EARGAHDWKNSAVAGA+
Sbjct: 84  RFPDLRGENNTKSLEAMVKHTGKESLQWGLAAGVYSGLTYGLTEARGAHDWKNSAVAGAI 143

Query: 131 TGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TGVA+ALTS+  SHE IVQ AITGAA+STAAN+ +GIF
Sbjct: 144 TGVALALTSEGSSHEQIVQGAITGAAISTAANLLSGIF 180

BLAST of Cp4.1LG12g03170 vs. TrEMBL
Match: G7JMT8_MEDTR (Outer envelope pore protein OS=Medicago truncatula GN=MTR_4g121900 PE=4 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 8.1e-52
Identity = 109/162 (67.28%), Postives = 128/162 (79.01%), Query Frame = 1

Query: 8   NSGGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITV--AGSLDSNSGAPSELSS 67
           N GG  L+DFGHPLVNR+A+SFVKAAGIGA+Q+ SREAY TV     +D+  G P E+S 
Sbjct: 20  NKGG--LFDFGHPLVNRIAESFVKAAGIGAVQAVSREAYFTVIEGTGIDNAGGMPPEISG 79

Query: 68  SRKKSFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAV 127
           ++K  F G  G T+ +S+EAMVKN GKES QWGLAAG+YSGLTYG+KEARG HDWKNSAV
Sbjct: 80  AKKNRFHGLRGETSSKSIEAMVKNTGKESFQWGLAAGLYSGLTYGMKEARGTHDWKNSAV 139

Query: 128 AGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           AGA+TG A+A TSD  SHE I Q AITGAA+STAAN+  GIF
Sbjct: 140 AGAITGAALACTSDNTSHEQIAQCAITGAAISTAANLLTGIF 179

BLAST of Cp4.1LG12g03170 vs. TrEMBL
Match: A0A059DB56_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00350 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.1e-52
Identity = 110/159 (69.18%), Postives = 131/159 (82.39%), Query Frame = 1

Query: 11  GGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVA--GSLDSNSGAPSELSSSRK 70
           GGF +D GHPL+NR+A+SF+KAAGIGA+Q+ SREAY T      LDS++G P E+  ++K
Sbjct: 22  GGF-FDLGHPLLNRIAESFIKAAGIGAIQAVSREAYFTAVEGAGLDSSNGVP-EIPGAKK 81

Query: 71  KSFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGA 130
             FP   G TN+ SLEAMVK+ GKES+QWGLAAGVYSGLTYGLKE RGAHDWKNSAVAGA
Sbjct: 82  HRFPELRGETNRNSLEAMVKSTGKESLQWGLAAGVYSGLTYGLKETRGAHDWKNSAVAGA 141

Query: 131 MTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           +TGVA+ALT+D  SHE IVQ AITGAA+STAAN+ +GIF
Sbjct: 142 ITGVALALTADDTSHEQIVQCAITGAAISTAANLLSGIF 178

BLAST of Cp4.1LG12g03170 vs. TrEMBL
Match: B9RZN4_RICCO (Protein translocase, putative OS=Ricinus communis GN=RCOM_1000020 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-51
Identity = 111/162 (68.52%), Postives = 134/162 (82.72%), Query Frame = 1

Query: 12  GFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYIT-VAGS-LDSNSGAPSELS----S 71
           G+++D GHPL+NR+A+SFVKAAGIGA+Q+ SREAY T + GS LDS+S  P ELS    +
Sbjct: 20  GWMFDLGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGSGLDSSSSVPPELSPAGAA 79

Query: 72  SRKKSFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAV 131
            ++  FP   G TN +SLEA+VK+ GKESMQWGLAAGVYSGLTYGL+EARGAHDWKNSAV
Sbjct: 80  KKRNRFPDLRGETNGKSLEALVKSTGKESMQWGLAAGVYSGLTYGLREARGAHDWKNSAV 139

Query: 132 AGAMTGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           AGA+TG+A+ALT+D  SHE IVQ AITGAA+STAAN+  GIF
Sbjct: 140 AGAVTGMALALTADDVSHEQIVQCAITGAAISTAANLLTGIF 181

BLAST of Cp4.1LG12g03170 vs. TAIR10
Match: AT4G16160.2 (AT4G16160.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 191.8 bits (486), Expect = 3.4e-49
Identity = 99/159 (62.26%), Postives = 129/159 (81.13%), Query Frame = 1

Query: 14  LYDFGHPLVNRVADSFVKAAGIGALQSASREAYITV---AGSLDSNSGAPSELSSSRKKS 73
           L+D GHPL+NR+ADSFVKAAG+GALQ+ SREAY TV   AG   +N G PSE++ ++K  
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 74  FPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAVAGAM 133
           FP   G ++K SL+A+VKN GKES+QWGLAAG+YSG+TYG+ E R GAHDW+NSAVAGA+
Sbjct: 81  FPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGAL 140

Query: 134 TGVAVAL-TSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TG A+A+ TS++ SHE +VQ A+TGAA+STAAN+ + +F
Sbjct: 141 TGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

BLAST of Cp4.1LG12g03170 vs. TAIR10
Match: AT2G28900.1 (AT2G28900.1 outer plastid envelope protein 16-1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 1

Query: 16  DFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKKSFPGFT 75
           D G+P +N   D+F+K   +G  +S + + Y  +                          
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 76  GGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTGVAVA 135
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 136 LTSDKPSHEHIVQYAITGAAVSTAA 161
               K   + IV  AI G A++TA+
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

BLAST of Cp4.1LG12g03170 vs. NCBI nr
Match: gi|778714609|ref|XP_011657265.1| (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 135/158 (85.44%), Postives = 144/158 (91.14%), Query Frame = 1

Query: 10  GGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKK 69
           GG FLYD GHPL+NRVADSFVKAAGIGALQS SREAY TVAGS+DSN   P ELSS RK+
Sbjct: 20  GGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQ 79

Query: 70  SFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 129
            FPG  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+
Sbjct: 80  RFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAV 139

Query: 130 TGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TGVAVALT+DK SHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 140 TGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 177

BLAST of Cp4.1LG12g03170 vs. NCBI nr
Match: gi|700192176|gb|KGN47380.1| (hypothetical protein Csa_6G307410 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 135/158 (85.44%), Postives = 144/158 (91.14%), Query Frame = 1

Query: 10  GGGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKK 69
           GG FLYD GHPL+NRVADSFVKAAGIGALQS SREAY TVAGS+DSN   P ELSS RK+
Sbjct: 69  GGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQ 128

Query: 70  SFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 129
            FPG  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+
Sbjct: 129 RFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAV 188

Query: 130 TGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TGVAVALT+DK SHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 189 TGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 226

BLAST of Cp4.1LG12g03170 vs. NCBI nr
Match: gi|659116980|ref|XP_008458360.1| (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-66
Identity = 135/157 (85.99%), Postives = 144/157 (91.72%), Query Frame = 1

Query: 11  GGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKKS 70
           G FLYD GHPL+NRVADSFVKAAGIGALQS SREAY TVAGS+DSNS  P ELSS RK+ 
Sbjct: 21  GPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQR 80

Query: 71  FPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMT 130
           FPG  G TNKESLEAMVK+VGKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSA+AGA+T
Sbjct: 81  FPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVT 140

Query: 131 GVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           GVAVALTSD+ SHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 141 GVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

BLAST of Cp4.1LG12g03170 vs. NCBI nr
Match: gi|764564776|ref|XP_011461756.1| (PREDICTED: outer envelope pore protein 16-2, chloroplastic isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53
Identity = 108/156 (69.23%), Postives = 130/156 (83.33%), Query Frame = 1

Query: 12  GFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSNSGAPSELSSSRKKSF 71
           G ++D GHPL+NR+A+SFVKAAGIGA+Q+ SREAY T    L S++G P ++S  +K  F
Sbjct: 28  GAMFDLGHPLLNRIAESFVKAAGIGAVQAVSREAYFTATEGLGSSNGTPPDISGHKKNRF 87

Query: 72  PGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAMTG 131
           P   GG + +SLEAMVK+ GKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGA+TG
Sbjct: 88  PDLRGGNSSKSLEAMVKHTGKESLQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAITG 147

Query: 132 VAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           VA+ALTSD  SHE IVQ AITGAA+S+AAN+ +GIF
Sbjct: 148 VALALTSDCSSHEQIVQCAITGAAISSAANLLSGIF 183

BLAST of Cp4.1LG12g03170 vs. NCBI nr
Match: gi|1009163490|ref|XP_015899996.1| (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 112/158 (70.89%), Postives = 131/158 (82.91%), Query Frame = 1

Query: 11  GGFLYDFGHPLVNRVADSFVKAAGIGALQSASREAYITVAGSLDSN-SGAPSELSSSRKK 70
           GGF +D GHPL+NR+A+SFVKAAGIGA+Q+ SREAY T     DSN S  P E+S ++K 
Sbjct: 25  GGF-FDLGHPLLNRIAESFVKAAGIGAVQAVSREAYFTAFEGFDSNGSSVPPEISGAKKH 84

Query: 71  SFPGFTGGTNKESLEAMVKNVGKESMQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAM 130
            FP   G TN++SLEAMVK+ GKES+QWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGA+
Sbjct: 85  RFPDLKGETNRKSLEAMVKSTGKESLQWGLAAGVYSGLTYGLKEARGAHDWKNSAVAGAI 144

Query: 131 TGVAVALTSDKPSHEHIVQYAITGAAVSTAANIFAGIF 168
           TGVA+ALT++  SHE IVQ AITGAA+STAAN+  GIF
Sbjct: 145 TGVALALTTEDYSHEQIVQCAITGAAISTAANLLTGIF 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
OP162_ARATH6.0e-4862.26Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana GN=OEP16... [more]
OP161_ARATH4.3e-1433.10Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP16... [more]
OEP16_PEA5.6e-1433.56Outer envelope pore protein 16, chloroplastic OS=Pisum sativum GN=OEP16 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0KCC7_CUCSA3.1e-6785.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307410 PE=4 SV=1[more]
M5XRN2_PRUPE1.6e-5270.25Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012201mg PE=4 SV=1[more]
G7JMT8_MEDTR8.1e-5267.28Outer envelope pore protein OS=Medicago truncatula GN=MTR_4g121900 PE=4 SV=2[more]
A0A059DB56_EUCGR8.1e-5269.18Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00350 PE=4 SV=1[more]
B9RZN4_RICCO1.8e-5168.52Protein translocase, putative OS=Ricinus communis GN=RCOM_1000020 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16160.23.4e-4962.26 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/... [more]
AT2G28900.12.4e-1533.10 outer plastid envelope protein 16-1[more]
Match NameE-valueIdentityDescription
gi|778714609|ref|XP_011657265.1|4.4e-6785.44PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis sativus][more]
gi|700192176|gb|KGN47380.1|4.4e-6785.44hypothetical protein Csa_6G307410 [Cucumis sativus][more]
gi|659116980|ref|XP_008458360.1|1.3e-6685.99PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo][more]
gi|764564776|ref|XP_011461756.1|2.1e-5369.23PREDICTED: outer envelope pore protein 16-2, chloroplastic isoform X2 [Fragaria ... [more]
gi|1009163490|ref|XP_015899996.1|1.1e-5270.89PREDICTED: outer envelope pore protein 16-2, chloroplastic [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0008150 biological_process
cellular_component GO:0031359 integral component of chloroplast outer membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g03170.1Cp4.1LG12g03170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 22..157
score: 1.7
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 78..167
score: 1.4E-73coord: 13..57
score: 1.4
NoneNo IPR availablePANTHERPTHR15371:SF1OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTICcoord: 13..57
score: 1.4E-73coord: 78..167
score: 1.4

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g03170Cp4.1LG17g00340Cucurbita pepo (Zucchini)cpecpeB158