Cp4.1LG12g02660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g02660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSucrose nonfermenting 4-like protein
LocationCp4.1LG12 : 1765711 .. 1767887 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTTCAAATTCGAAGGTGTTTTGCTTCATATTTTGGTGGGTTCTTGCTCCAGTTAATCTAGGGCTAGTTTTTTTTCTTCTTGTTGTGTACAATTCCGCTCTTCTACGCAGGCAATGGCAGCTAGAACTTGTGATTTTTGATTGCCGAAGTCTGTTGTAGAATAATCTGGTTTATTCGGTTCCTTTTTACTTTTGTCTTCCACGCTTGACGAATTTCTTTTGAGTTGAGTCTAGCTCGGTCGTTTTGAGGATGAACAAGTTATGAGATGTCAGATTTGTAGATTTCCATATTGTAGCGTAATTTGCTCGAATTGATTTTACAGTGTATTGTGGTTTAAATTCATGGGACGCGGTAGAAGTTTCATTGCCTGAAGACTACATTTGGGGAATTCTCTCATCGATTGAGCGGCGGATGTTTGCTTCCAGTATGGATACTGTGCGGGACACAGCTAGAAATGCAGGAACGTTGTTAATCCCAATGCGGTTTGTCTGGCCGTATGGGGGAAGAAGTGTATTTCTCAGCGGTTCTTTTACCAGGTGATGTTCGGGACTTCATGGTCTTTTGTACTTTCGGTACTTTCCTGCACGTGCTATGGTTGCGGAACGCATCAACTACGTTTGAATTTTCTATTTCAACAACATGCATGTATGAATTATGCTGTAAACGATTTTAGTAAACTTTAATTGTATTTTTGATGAAGGTGGTCGGAGCTTCTTCCTATGACGCCTATGGAGGGCTGTCCTACTGTTTTTCAGGCTATTTACAGCTTAACCCCTGGATATCACCAGGTCAGATTGTGGTGGTTGAATGTAACATTTTAAATTGTTCATGTCATTTTTAGCTGGATTCTGCGTAATTTTGCTATAATCTTAGATGTTAATCTACTAAGCATCGAATATTAGTTGTTCTGCTTGGGTGAAGCTGGTGTTTCTCGAGGAAACTTGGCTTCCTGAAAGAATTAGATTAAGCTGAATTACAGTTATTTTGGCTTCTCTGACAATCTTATGTAAATGGCGGAAGTAGATCAAGGTCAGAATGTGAAGGAAGGAACTATAATAAGCTGCACTGTGCATGTGTTTTTCAAAAACGATTTTTTCCATTCGTTGTTTCTCGTTATACTACGTAATATTATCCATCTTTTTATCCATATTCATCTCATATGCACAGCTATTATTGATTGCGATGCCATTTTTCTTATTATTTCCAATTTGCTTTACTATGTACTCCAACAATGAGAAATTGTTTGCTGAGCCATTGATTTTTTAAAGAAATTTATGTAGTTTTGTTATACTAATGTGCGCACAAGGGTTCTCTTGCATGCAGTATAAATTTTTTGTTGATGGAGAATGGCGGCACGATGAGCAGCAGACTTGTATTTCTGGTGAATATGGGGTTGTAAACACTGTTCTCTTGGCTACAGAGCCTAGTTATGCTGCTCCACTTGCCAATCCAGAGATGGCCCCTGGATCTAGCATGGATGTGGATAATGATGCCTTCCGTCGCTTGGTTAGAATAATTTATACATTATTGCTCGTTTCATTGTATTCTTTATGCCATAGAGTAAAGGAAGTCGAGAATTGTGGTTTTTATTTAACTGTTTGATCTATGGTTTTAATCAATTGATGAAAATGCACAATTACTATTTCCGGCTCGAGCCTTTTATTTCCAGCTAGCGATTTATTTTCCTTTTATTGCACTCTAGGATAGTAGTAGTTTCTATATGAGTTATTTCTCTGCCGTACTTACGGATTAGGTTATTGATGAATCTTACTTTTATCTACTGGGATTTCTGTTACACTCTCACTGTTCCTTGTATCAGCTAATTGAAATTCTTGTTATCATCCAGGTCCGAATAAATGATGGACGATTGTCAGAGGCTGTGCATAGTATATCAGAGGCTGATCTGCAGTGCTCCCGTCACCGCATATCTGCATTCTTGTCCACACATACTGTTTACGAGTTGCTCCCGGAGTCGGGCAAGGTTTGGATTCTCTATCTTCTAAACTTTTGTTTGATAACATTTTTTTGATTTGTTTTATCCTTTAATGAGAGTACAATTATGTTACAGGTTGTTGCTTTGGACATTGACTTACCTGTGAAGCAAGCTTTTCATATATTGCATGAGCAGGCATGTCTTTTTTCTCCTTCCCTCACGTCCCCTCCGTTTGGCTAG

mRNA sequence

ATGCGGTTCAAATTCGAAGTGTATTGTGGTTTAAATTCATGGGACGCGGTAGAAGTTTCATTGCCTGAAGACTACATTTGGGGAATTCTCTCATCGATTGAGCGGCGGATGTTTGCTTCCAGTATGGATACTGTGCGGGACACAGCTAGAAATGCAGGAACGTTGTTAATCCCAATGCGGTTTGTCTGGCCGTATGGGGGAAGAAGTGTATTTCTCAGCGGTTCTTTTACCAGGTGGTCGGAGCTTCTTCCTATGACGCCTATGGAGGGCTGTCCTACTGTTTTTCAGGCTATTTACAGCTTAACCCCTGGATATCACCAGTATAAATTTTTTGTTGATGGAGAATGGCGGCACGATGAGCAGCAGACTTGTATTTCTGGTGAATATGGGGTTGTAAACACTGTTCTCTTGGCTACAGAGCCTAGTTATGCTGCTCCACTTGCCAATCCAGAGATGGCCCCTGGATCTAGCATGGATGTGGATAATGATGCCTTCCGTCGCTTGGTCCGAATAAATGATGGACGATTGTCAGAGGCTGTGCATAGTATATCAGAGGCTGATCTGCAGTGCTCCCGTCACCGCATATCTGCATTCTTGTCCACACATACTGTTTACGAGTTGCTCCCGGAGTCGGGCAAGGTTGTTGCTTTGGACATTGACTTACCTGTGAAGCAAGCTTTTCATATATTGCATGAGCAGGCATGTCTTTTTTCTCCTTCCCTCACGTCCCCTCCGTTTGGCTAG

Coding sequence (CDS)

ATGCGGTTCAAATTCGAAGTGTATTGTGGTTTAAATTCATGGGACGCGGTAGAAGTTTCATTGCCTGAAGACTACATTTGGGGAATTCTCTCATCGATTGAGCGGCGGATGTTTGCTTCCAGTATGGATACTGTGCGGGACACAGCTAGAAATGCAGGAACGTTGTTAATCCCAATGCGGTTTGTCTGGCCGTATGGGGGAAGAAGTGTATTTCTCAGCGGTTCTTTTACCAGGTGGTCGGAGCTTCTTCCTATGACGCCTATGGAGGGCTGTCCTACTGTTTTTCAGGCTATTTACAGCTTAACCCCTGGATATCACCAGTATAAATTTTTTGTTGATGGAGAATGGCGGCACGATGAGCAGCAGACTTGTATTTCTGGTGAATATGGGGTTGTAAACACTGTTCTCTTGGCTACAGAGCCTAGTTATGCTGCTCCACTTGCCAATCCAGAGATGGCCCCTGGATCTAGCATGGATGTGGATAATGATGCCTTCCGTCGCTTGGTCCGAATAAATGATGGACGATTGTCAGAGGCTGTGCATAGTATATCAGAGGCTGATCTGCAGTGCTCCCGTCACCGCATATCTGCATTCTTGTCCACACATACTGTTTACGAGTTGCTCCCGGAGTCGGGCAAGGTTGTTGCTTTGGACATTGACTTACCTGTGAAGCAAGCTTTTCATATATTGCATGAGCAGGCATGTCTTTTTTCTCCTTCCCTCACGTCCCCTCCGTTTGGCTAG

Protein sequence

MRFKFEVYCGLNSWDAVEVSLPEDYIWGILSSIERRMFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQAIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGSSMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVALDIDLPVKQAFHILHEQACLFSPSLTSPPFG
Homology
[Close]
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match: SNF4_ARATH (Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-63
Identity = 123/203 (60.59%), Postives = 146/203 (71.92%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MF S++D+ R  +  +G LL P RFVWPYGGR VFLSGSFTRW+E +PM+P+EGCPTVFQ
Sbjct: 1   MFGSTLDSSRGNSAASGQLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
            I +LTPGYHQYKFFVDGEWRHDE Q  +SG  GVVNT+ + T P       +PE    S
Sbjct: 61  VICNLTPGYHQYKFFVDGEWRHDEHQPFVSGNGGVVNTIFI-TGPDMVPAGFSPETLGRS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           +MDVD D F R    +     EAV  +S  DL+ SRHRIS  LST T YELLPESGKV+A
Sbjct: 121 NMDVD-DVFLRTADPS----QEAVPRMSGVDLELSRHRISVLLSTRTAYELLPESGKVIA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD++LPVKQAFHIL+EQ    +P
Sbjct: 181 LDVNLPVKQAFHILYEQGIPLAP 197

[Close]
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match: AAKB1_MOUSE (5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus GN=Prkab1 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 8.3e-14
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 58  PMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQAIYSLTPGYHQYKFFVDGEWR 117
           P  F W  GG+ V+LSGSF  WS+L    P+      F AI  L  G HQYKFFVDG+W 
Sbjct: 79  PTVFRWTGGGKEVYLSGSFNNWSKL----PLTRSQNNFVAILDLPEGEHQYKFFVDGQWT 138

Query: 118 HDEQQTCISGEYGVVNTVL 137
           HD  +  ++ + G VN ++
Sbjct: 139 HDPSEPIVTSQLGTVNNII 153

[Close]
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match: AAKB1_RAT (5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus GN=Prkab1 PE=1 SV=4)

HSP 1 Score: 79.0 bits (193), Expect = 8.3e-14
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 58  PMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQAIYSLTPGYHQYKFFVDGEWR 117
           P  F W  GG+ V+LSGSF  WS+L    P+      F AI  L  G HQYKFFVDG+W 
Sbjct: 79  PTVFRWTGGGKEVYLSGSFNNWSKL----PLTRSQNNFVAILDLPEGEHQYKFFVDGQWT 138

Query: 118 HDEQQTCISGEYGVVNTVL 137
           HD  +  ++ + G VN ++
Sbjct: 139 HDPSEPIVTSQLGTVNNII 153

[Close]
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match: AAKB1_BOVIN (5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus GN=PRKAB1 PE=2 SV=3)

HSP 1 Score: 79.0 bits (193), Expect = 8.3e-14
Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 58  PMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQAIYSLTPGYHQYKFFVDGEWR 117
           P  F W  GG+ V+LSGSF  WS+L    P+      F AI  L  G HQYKFFVDG+W 
Sbjct: 79  PTVFRWTGGGKEVYLSGSFNNWSKL----PLTRSHNNFVAILDLPEGEHQYKFFVDGQWT 138

Query: 118 HDEQQTCISGEYGVVNTVL 137
           HD  +  ++ + G VN V+
Sbjct: 139 HDPSEPVVTSQLGTVNNVI 153

[Close]
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match: AAKB1_HUMAN (5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens GN=PRKAB1 PE=1 SV=4)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1 

Query: 58  PMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQAIYSLTPGYHQYKFFVDGEWR 117
           P  F W  GG+ V+LSGSF  WS+L    P+      F AI  L  G HQYKFFVDG+W 
Sbjct: 79  PTVFRWTGGGKEVYLSGSFNNWSKL----PLTRSHNNFVAILDLPEGEHQYKFFVDGQWT 138

Query: 118 HDEQQTCISGEYGVVNTVL 137
           HD  +  ++ + G VN ++
Sbjct: 139 HDPSEPIVTSQLGTVNNII 153

[Close]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match: A0A0A0KHE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G198240 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.7e-109
Identity = 193/203 (95.07%), Postives = 197/203 (97.04%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFASSMDTVRDTAR AGTLLIPMRFVWPYGGRSVFLSGSFTRWSEL+PMTPMEGCPTVFQ
Sbjct: 1   MFASSMDTVRDTARTAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELVPMTPMEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYSLTPGYHQYKFFVDGEWRHDEQQTC+SGEYGVVNTVLLATEPSYAAPLANPEM PGS
Sbjct: 61  AIYSLTPGYHQYKFFVDGEWRHDEQQTCVSGEYGVVNTVLLATEPSYAAPLANPEMTPGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           SMDVDN+AFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA
Sbjct: 121 SMDVDNEAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LDIDLPVKQAFHILHEQ    +P
Sbjct: 181 LDIDLPVKQAFHILHEQGIPTAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match: M5XPT7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004800mg PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 9.1e-84
Identity = 148/203 (72.91%), Postives = 169/203 (83.25%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFA++MD+ RD      T+LIPMRFVWPYGGRSVFLSGSF RWSEL+PMTP+EGCPTVFQ
Sbjct: 1   MFATNMDSARDVGGAPSTVLIPMRFVWPYGGRSVFLSGSFARWSELIPMTPVEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYS+TPGYHQYKFFVDGEWRHDE Q  +SGEYG+VNTVLLAT+P++  P   PE+  GS
Sbjct: 61  AIYSVTPGYHQYKFFVDGEWRHDEHQPYVSGEYGLVNTVLLATDPNFFHPNVTPEITSGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           +M+ D +AFRRLVRI DG L++ V  I+E DLQ SRHRIS FLS HT YELLPESGKVVA
Sbjct: 121 NMEEDTEAFRRLVRITDGNLTDVVPRITEGDLQGSRHRISVFLSAHTTYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD+DLPVKQAFHILHEQ    +P
Sbjct: 181 LDVDLPVKQAFHILHEQGIPLAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match: I1L118_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G046800 PE=4 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 2.0e-83
Identity = 150/204 (73.53%), Postives = 171/204 (83.82%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARN-AGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVF 96
           MF  SMD+ RD A   AGT+LIPMRFVWPYGGRSVFLSGSFTRW ELLPM+P+EGCPTVF
Sbjct: 1   MFGQSMDSARDAAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVF 60

Query: 97  QAIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPG 156
           Q IY+L PGYHQYKFFVDGEWRHDE Q  + GEYG+VNTVLLAT+P+Y  P+  P++A G
Sbjct: 61  QVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVLLATDPNY-MPVLPPDVASG 120

Query: 157 SSMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVV 216
           +SMDVDNDAFRR+ R+ DG LSE +  IS+ D+Q SR RISAFLS+HT YELLPESGKVV
Sbjct: 121 NSMDVDNDAFRRMARLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVV 180

Query: 217 ALDIDLPVKQAFHILHEQACLFSP 240
           ALD+DLPVKQAFHILHEQ    +P
Sbjct: 181 ALDVDLPVKQAFHILHEQGVFMAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match: I1MGR7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G154300 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-83
Identity = 147/203 (72.41%), Postives = 170/203 (83.74%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MF  SMD+ R+    AGT+LIPMRFVWPYGGRSVFLSGSFTRW ELLPM+P+EGCPTVFQ
Sbjct: 1   MFGQSMDSARNAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
            IY+L PGYHQYKFFVDGEWRHDE Q  + G+YG+VNTV LAT+P+Y  P+  P++A G+
Sbjct: 61  VIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGDYGIVNTVFLATDPNY-IPVLPPDVASGN 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           SMDVDNDAFRR+VR+ DG LSE +  IS+ D+Q SR RISAFLS+HT YELLPESGKVVA
Sbjct: 121 SMDVDNDAFRRMVRLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD+DLPVKQAFHILHEQ    +P
Sbjct: 181 LDVDLPVKQAFHILHEQGIFMAP 202

[Close]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match: A0A0B2SMB8_GLYSO (Sucrose nonfermenting 4-like protein OS=Glycine soja GN=glysoja_026445 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-83
Identity = 147/203 (72.41%), Postives = 170/203 (83.74%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MF  SMD+ R+    AGT+LIPMRFVWPYGGRSVFLSGSFTRW ELLPM+P+EGCPTVFQ
Sbjct: 1   MFGQSMDSARNAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
            IY+L PGYHQYKFFVDGEWRHDE Q  + G+YG+VNTV LAT+P+Y  P+  P++A G+
Sbjct: 61  VIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGDYGIVNTVFLATDPNY-IPVLPPDVASGN 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           SMDVDNDAFRR+VR+ DG LSE +  IS+ D+Q SR RISAFLS+HT YELLPESGKVVA
Sbjct: 121 SMDVDNDAFRRMVRLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD+DLPVKQAFHILHEQ    +P
Sbjct: 181 LDVDLPVKQAFHILHEQGIFMAP 202

[Close]
BLAST of Cp4.1LG12g02660 vs. TAIR10
Match: AT1G09020.1 (AT1G09020.1 homolog of yeast sucrose nonfermenting 4)

HSP 1 Score: 244.6 bits (623), Expect = 6.5e-65
Identity = 123/203 (60.59%), Postives = 146/203 (71.92%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MF S++D+ R  +  +G LL P RFVWPYGGR VFLSGSFTRW+E +PM+P+EGCPTVFQ
Sbjct: 1   MFGSTLDSSRGNSAASGQLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
            I +LTPGYHQYKFFVDGEWRHDE Q  +SG  GVVNT+ + T P       +PE    S
Sbjct: 61  VICNLTPGYHQYKFFVDGEWRHDEHQPFVSGNGGVVNTIFI-TGPDMVPAGFSPETLGRS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           +MDVD D F R    +     EAV  +S  DL+ SRHRIS  LST T YELLPESGKV+A
Sbjct: 121 NMDVD-DVFLRTADPS----QEAVPRMSGVDLELSRHRISVLLSTRTAYELLPESGKVIA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD++LPVKQAFHIL+EQ    +P
Sbjct: 181 LDVNLPVKQAFHILYEQGIPLAP 197

[Close]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match: gi|778714039|ref|XP_011657174.1| (PREDICTED: sucrose nonfermenting 4-like protein [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 5.3e-109
Identity = 193/203 (95.07%), Postives = 197/203 (97.04%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFASSMDTVRDTAR AGTLLIPMRFVWPYGGRSVFLSGSFTRWSEL+PMTPMEGCPTVFQ
Sbjct: 1   MFASSMDTVRDTARTAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELVPMTPMEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYSLTPGYHQYKFFVDGEWRHDEQQTC+SGEYGVVNTVLLATEPSYAAPLANPEM PGS
Sbjct: 61  AIYSLTPGYHQYKFFVDGEWRHDEQQTCVSGEYGVVNTVLLATEPSYAAPLANPEMTPGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           SMDVDN+AFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA
Sbjct: 121 SMDVDNEAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LDIDLPVKQAFHILHEQ    +P
Sbjct: 181 LDIDLPVKQAFHILHEQGIPTAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match: gi|659117202|ref|XP_008458476.1| (PREDICTED: sucrose nonfermenting 4-like protein [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 2.0e-108
Identity = 192/203 (94.58%), Postives = 197/203 (97.04%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFASSMDTVRDTAR AGTLLIPMRFVWPYGGRSVFLSGSFTRWSEL+PMTPMEGCPTVFQ
Sbjct: 1   MFASSMDTVRDTARTAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELVPMTPMEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYSLTPGYHQYKFFVDGEWRHDEQQTC+SGEYGVVNTVLLATEPSYAAPLA+PEM PGS
Sbjct: 61  AIYSLTPGYHQYKFFVDGEWRHDEQQTCVSGEYGVVNTVLLATEPSYAAPLASPEMTPGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           SMDVDN+AFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA
Sbjct: 121 SMDVDNEAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LDIDLPVKQAFHILHEQ    +P
Sbjct: 181 LDIDLPVKQAFHILHEQGIPTAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match: gi|596136302|ref|XP_007222344.1| (hypothetical protein PRUPE_ppa004800mg [Prunus persica])

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-83
Identity = 148/203 (72.91%), Postives = 169/203 (83.25%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFA++MD+ RD      T+LIPMRFVWPYGGRSVFLSGSF RWSEL+PMTP+EGCPTVFQ
Sbjct: 1   MFATNMDSARDVGGAPSTVLIPMRFVWPYGGRSVFLSGSFARWSELIPMTPVEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYS+TPGYHQYKFFVDGEWRHDE Q  +SGEYG+VNTVLLAT+P++  P   PE+  GS
Sbjct: 61  AIYSVTPGYHQYKFFVDGEWRHDEHQPYVSGEYGLVNTVLLATDPNFFHPNVTPEITSGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           +M+ D +AFRRLVRI DG L++ V  I+E DLQ SRHRIS FLS HT YELLPESGKVVA
Sbjct: 121 NMEEDTEAFRRLVRITDGNLTDVVPRITEGDLQGSRHRISVFLSAHTTYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD+DLPVKQAFHILHEQ    +P
Sbjct: 181 LDVDLPVKQAFHILHEQGIPLAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match: gi|356529781|ref|XP_003533466.1| (PREDICTED: sucrose nonfermenting 4-like protein isoform X4 [Glycine max])

HSP 1 Score: 317.0 bits (811), Expect = 2.9e-83
Identity = 150/204 (73.53%), Postives = 171/204 (83.82%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARN-AGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVF 96
           MF  SMD+ RD A   AGT+LIPMRFVWPYGGRSVFLSGSFTRW ELLPM+P+EGCPTVF
Sbjct: 1   MFGQSMDSARDAAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVF 60

Query: 97  QAIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPG 156
           Q IY+L PGYHQYKFFVDGEWRHDE Q  + GEYG+VNTVLLAT+P+Y  P+  P++A G
Sbjct: 61  QVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVLLATDPNY-MPVLPPDVASG 120

Query: 157 SSMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVV 216
           +SMDVDNDAFRR+ R+ DG LSE +  IS+ D+Q SR RISAFLS+HT YELLPESGKVV
Sbjct: 121 NSMDVDNDAFRRMARLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVV 180

Query: 217 ALDIDLPVKQAFHILHEQACLFSP 240
           ALD+DLPVKQAFHILHEQ    +P
Sbjct: 181 ALDVDLPVKQAFHILHEQGVFMAP 203

[Close]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match: gi|645232996|ref|XP_008223131.1| (PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Prunus mume])

HSP 1 Score: 315.8 bits (808), Expect = 6.5e-83
Identity = 147/203 (72.41%), Postives = 168/203 (82.76%), Query Frame = 1 

Query: 37  MFASSMDTVRDTARNAGTLLIPMRFVWPYGGRSVFLSGSFTRWSELLPMTPMEGCPTVFQ 96
           MFA++MD+ RD      T+LIPMRFVWPYGGRSVFLSGSF RWSEL+PMTP+EGCPTVFQ
Sbjct: 1   MFATNMDSARDVGGAPSTVLIPMRFVWPYGGRSVFLSGSFARWSELIPMTPVEGCPTVFQ 60

Query: 97  AIYSLTPGYHQYKFFVDGEWRHDEQQTCISGEYGVVNTVLLATEPSYAAPLANPEMAPGS 156
           AIYS+ PGYHQYKFFVDGEWRHDE Q  +SGEYG+VNTVLLAT+P++  P   PE+  GS
Sbjct: 61  AIYSVMPGYHQYKFFVDGEWRHDEHQPYVSGEYGLVNTVLLATDPNFFHPNVTPEITSGS 120

Query: 157 SMDVDNDAFRRLVRINDGRLSEAVHSISEADLQCSRHRISAFLSTHTVYELLPESGKVVA 216
           +M+ D +AFRRLVRI DG L++ V  I+E DLQ SRHRIS FLS HT YELLPESGKVVA
Sbjct: 121 NMEEDTEAFRRLVRITDGNLTDVVPRITEGDLQGSRHRISVFLSAHTTYELLPESGKVVA 180

Query: 217 LDIDLPVKQAFHILHEQACLFSP 240
           LD+DLPVKQAFHILHEQ    +P
Sbjct: 181 LDVDLPVKQAFHILHEQGIPLAP 203

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g02660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SNF4_ARATH1.1e-6360.59Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=1[more]
AAKB1_MOUSE8.3e-1444.305'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus GN=Prkab1 PE=1 SV... [more]
AAKB1_RAT8.3e-1444.305'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus GN=Prkab1 PE... [more]
AAKB1_BOVIN8.3e-1445.575'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus GN=PRKAB1 PE=2 SV=3[more]
AAKB1_HUMAN1.1e-1344.305'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens GN=PRKAB1 PE=1 SV... [more]
BLAST of Cp4.1LG12g02660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHE6_CUCSA3.7e-10995.07Uncharacterized protein OS=Cucumis sativus GN=Csa_6G198240 PE=4 SV=1[more]
M5XPT7_PRUPE9.1e-8472.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004800mg PE=4 SV=1[more]
I1L118_SOYBN2.0e-8373.53Uncharacterized protein OS=Glycine max GN=GLYMA_09G046800 PE=4 SV=2[more]
I1MGR7_SOYBN4.5e-8372.41Uncharacterized protein OS=Glycine max GN=GLYMA_15G154300 PE=4 SV=1[more]
A0A0B2SMB8_GLYSO4.5e-8372.41Sucrose nonfermenting 4-like protein OS=Glycine soja GN=glysoja_026445 PE=4 SV=1[more]
BLAST of Cp4.1LG12g02660 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09020.16.5e-6560.59 homolog of yeast sucrose nonfermenting 4[more]
BLAST of Cp4.1LG12g02660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714039|ref|XP_011657174.1|5.3e-10995.07PREDICTED: sucrose nonfermenting 4-like protein [Cucumis sativus][more]
gi|659117202|ref|XP_008458476.1|2.0e-10894.58PREDICTED: sucrose nonfermenting 4-like protein [Cucumis melo][more]
gi|596136302|ref|XP_007222344.1|1.3e-8372.91hypothetical protein PRUPE_ppa004800mg [Prunus persica][more]
gi|356529781|ref|XP_003533466.1|2.9e-8373.53PREDICTED: sucrose nonfermenting 4-like protein isoform X4 [Glycine max][more]
gi|645232996|ref|XP_008223131.1|6.5e-8372.41PREDICTED: sucrose nonfermenting 4-like protein isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g02660.1Cp4.1LG12g02660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014756Immunoglobulin E-setunknownSSF81296E set domainscoord: 57..138
score: 4.2
NoneNo IPR availablePANTHERPTHR13780AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNITcoord: 55..233
score: 6.5E
NoneNo IPR availablePANTHERPTHR13780:SF43SUBFAMILY NOT NAMEDcoord: 55..233
score: 6.5E
NoneNo IPR availableunknownSSF54631CBS-domain paircoord: 193..233
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g02660Cucurbita moschata (Rifu)cmocpeB225
Cp4.1LG12g02660Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g02660Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g02660Wild cucumber (PI 183967)cpecpiB133
Cp4.1LG12g02660Wild cucumber (PI 183967)cpecpiB155
Cp4.1LG12g02660Cucumber (Chinese Long) v2cpecuB132
Cp4.1LG12g02660Cucumber (Chinese Long) v2cpecuB153
Cp4.1LG12g02660Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g02660Bottle gourd (USVL1VR-Ls)cpelsiB118
Cp4.1LG12g02660Watermelon (Charleston Gray)cpewcgB139
Cp4.1LG12g02660Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g02660Watermelon (97103) v1cpewmB152
Cp4.1LG12g02660Watermelon (97103) v1cpewmB161
Cp4.1LG12g02660Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g02660Melon (DHL92) v3.5.1cpemeB140
Cp4.1LG12g02660Cucumber (Gy14) v2cgybcpeB303
Cp4.1LG12g02660Cucumber (Gy14) v2cgybcpeB734
Cp4.1LG12g02660Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g02660Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g02660Silver-seed gourdcarcpeB0099
Cp4.1LG12g02660Silver-seed gourdcarcpeB0450
Cp4.1LG12g02660Silver-seed gourdcarcpeB0857
Cp4.1LG12g02660Silver-seed gourdcarcpeB1163
Cp4.1LG12g02660Cucumber (Chinese Long) v3cpecucB0154
Cp4.1LG12g02660Cucumber (Chinese Long) v3cpecucB0177
Cp4.1LG12g02660Wax gourdcpewgoB0181
Cp4.1LG12g02660Wax gourdcpewgoB0188
Cp4.1LG12g02660Cucurbita pepo (Zucchini)cpecpeB158
Cp4.1LG12g02660Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG12g02660Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG12g02660Cucumber (Gy14) v1cgycpeB0472
Cp4.1LG12g02660Cucumber (Gy14) v1cgycpeB0671
Cp4.1LG12g02660Cucurbita maxima (Rimu)cmacpeB262
Cp4.1LG12g02660Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g02660Cucurbita maxima (Rimu)cmacpeB810
Cp4.1LG12g02660Cucurbita maxima (Rimu)cmacpeB895