Cp4.1LG12g01970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTGCTTCGTTGGCTCTGAGTAGTTGGCAATTAAGCCTTGTCCTCTTGGTGAACTTTCCTAGGCTGTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTTCTTCTCATCCAAACAAAACCCATTTCAAAATTTCTGTTTTTTCCTTCAGAGATTCCACAAATCCTCTCACCTCGACGAAGGTAAAGGAATGAATGGCGCTACAGCAACAGATTCTGAAGCAGACATCTCTGAATATGTCGAAGTTGATCCCACCGGCAGATATGGAAGAGTATGTTCGGAGAATCTCATGTTTTGTGTTACATAACAATGAGTTTTGATCTTTACTGAAAACCCTTTTTGTGTCTTGTTCCATTGCTTTCTTCAGTACAATGATGTTCTTGGCAAAGGAGCATCCAAGACAGTGTAAGAACAGAACAACAAAGAGCACCCTCCTCTGTTTTTTTCCAACATGTCTGTTCTTCCTGTTCTAATGGGTTTTTTCTGTCTGATAGTTACAGAGCTTTCGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTCTGTGATTTCCTTCAAACCCCTGACGATCTCGAGAGGCTATACAGAGAAATCCATTTATTGAAGACGCTAAAACATAAGAACATAATGAAATTCTGTTCTTCCTGGGTCGACACTGCTAATAGAAACATTAACTTCGTTACAGAGATGTTCACTTCCGGGACTCTCAGACAGTGAGTTTCGTTTCCATGGTGTTTTTCCTCAAATGGGTTTGTCGAAAAACATGTTTTCCGACCAAATTTGTCTGTGCAGATACAGGCTGAAGCACAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTACAAGGGCTTCATTATCTTCATAGCCATGATCCTCCTGTAATCCACAGAGATCTTAAATGTGATAATATCTTTGTCAATGGGAATCAAGGGGAAGTCAAGATTGGTGATCTTGGACTTGCTGCTGTTCTTCGTAAATCCCATGCCGTTCGATGTGTTGGTAAGTCATTGAATCATGTGTTAGGAACCACGACTCTCCACAATAATATGATATTGTCCACTTTAAACCTAAGCTCTAGTCGTTTTGCTTTCGGTTCTTCCAAAAGACCTCGTATTCCTGGCTTATAAACCCATGATCAACTACTTAATTAGCCAATGTGTGACTCCTCTCCCAACAATCCTCCCCTCGAACAAAGTATACCATAGAGCCTCCCCCGAGGCCTATAGAGCCCTCGAACAAAGTATACCCTATGTTTGACACTTTAGTCACTTTTGACTCTGAAGCCCTCGAGCCTCACAATTTTTTTGTTTGACATCTGAGAATTCCATTGGTATCACTAAGTTAAGGGCATGACTCTGATACCATGTTAGGAACCATGACTCTTCGCAGTGGTATGATATTGTCCACTTTGAGCCTAAGCTTTTATGGTTTTCCTAGAAGATCTTGTACCAATGGAGATGTATTCCTTACTTATAAACCCATGATCAACCCTTTAATTAGCCAATGTGGGACTGCGAAGAACAGAATCCTCATTTTCTGGGTTTGATTTTTCATCATTTCAGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAGGAGTATAATGAACTGGTTGATATCTATTCTTTTGGAATGTGTATCCTTGAGATGGTTACTTTTGAATATCCATACAGTGAATGCACTCACCCTGTTCAGATTTACAAGAAAGTTATCTCTGTAAGATATCAATGTTCATGTTCATGTTCATTTTCTTCAAGTTTTGTTCATTGTGGTGCTTGTTTCTTACATCTTCCTTTCAGGGGAAGAAGCCTGATGCCTTGTATAAGGTAAAGGATCTCGAGGTTCGGGTTTTCGTCGAGAAATGCTTGGCTACCGTGTCGACTAGGCTGTCTGCTAGAGAGCTTTTGAATGACCCTTTTCTTCAAATGGATGGTTGTGATTCTTTACTCATGCCAATAGATTACTATTCTGAATATGATGAAGTGAACAATGGTTTGGATTACTGTTTGATTGATAACGAAGTGAGCGAAATCGATCTTTTTTCGTGTCAAGACGATGAGCATTTGGCAGATGTTGATATAACGATTCAAGGGAGAAGAAGAGGCAACGACGATATATTTCTACGGCTTCGGATTGCGGATAAAGAAGGTAAGAAGAACGAAGAACGAAGAACGAAGAACGAAAGTTTAAGATGATGGGTTACGGTAAATCTAATTTAGTATGTCGTCTTGCAGGTCGAATACGAAACATCTACTTCCCGTTCGATTTAGAGAATGATAGTGCTTTAAGTGTTGCAAATGAGATGGTTTCTGAGCTTGATATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGATGAGATAGCTACATTGGTGCCAGAATGGAAGAGAGGAACAAGCTCTGATGCTAATGTTTGTCACAATTGTGCTTTAAACGGTTCGGTTTTGGATTACGTTTCGCCGAACCATCCGACGATGAAGAATCTACACGTTCTTCAGTGTTCTGAGGAGCATGGCTGTGCTTCTATCCATGGACGTTTTGAGGAGATTACATACCAAGTTGAGGGGTCGGAACAATTCAATGGTTCATCGGAGAATCCGATCGATATCCATTATGCCGATATTTGGGCGCAGCGAGATGGCGATGAATCACATGGAGGAGCATCAGAACAGCTGAAGTTCAAGAAGGAAGAAAGTAGTGTACATAAGAACAATAATGATCATCAAACAGAATTCCGAATGAGAAACTCGAGCTCATCGAATCGTTTGGTGTCATTTGCCGATGATCCTGAGAACGAGATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGTTAAGGGATCAACAATTAGGAGTCAAGGTAAAATCTTTCAGCTTACAGCCGAATCCGAACCTTGCCGAGACTGACCGTGGAGCTTTCGTATCGTTGCTTTCACCAAATATCAATGAAGCAGCAAAACATAAGGCTGGTATCACTTCACATTCCCCTCATGTTGCTGCTGACAACGTGTTGGAAAACCGAACCTTTCAAGACGACAGCTTCGATGTCGACGAGTCGGGTAGTCCCGAGCTGATGATTACGGCCAAGAGCTTCTATGCAGGGACATTGTTACCTTATTCTCTACAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG TCTGCTTCGTTGGCTCTGAGTAGTTGGCAATTAAGCCTTGTCCTCTTGGTGAACTTTCCTAGGCTGTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTTCTTCTCATCCAAACAAAACCCATTTCAAAATTTCTGTTTTTTCCTTCAGAGATTCCACAAATCCTCTCACCTCGACGAAGGTAAAGGAATGAATGGCGCTACAGCAACAGATTCTGAAGCAGACATCTCTGAATATGTCGAAGTTGATCCCACCGGCAGATATGGAAGATACAATGATGTTCTTGGCAAAGGAGCATCCAAGACAGTTTACAGAGCTTTCGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTCTGTGATTTCCTTCAAACCCCTGACGATCTCGAGAGGCTATACAGAGAAATCCATTTATTGAAGACGCTAAAACATAAGAACATAATGAAATTCTGTTCTTCCTGGGTCGACACTGCTAATAGAAACATTAACTTCGTTACAGAGATGTTCACTTCCGGGACTCTCAGACAATACAGGCTGAAGCACAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTACAAGGGCTTCATTATCTTCATAGCCATGATCCTCCTCGAGATGGCGATGAATCACATGGAGGAGCATCAGAACAGCTGAAGTTCAAGAAGGAAGAAAGTAGTGTACATAAGAACAATAATGATCATCAAACAGAATTCCGAATGAGAAACTCGAGCTCATCGAATCGTTTGGTGTCATTTGCCGATGATCCTGAGAACGAGATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGTTAAGGGATCAACAATTAGGAGTCAAGGTAAAATCTTTCAGCTTACAGCCGAATCCGAACCTTGCCGAGACTGACCGTGGAGCTTTCGTATCGTTGCTTTCACCAAATATCAATGAAGCAGCAAAACATAAGGCTGGTATCACTTCACATTCCCCTCATGTTGCTGCTGACAACGTGTTGGAAAACCGAACCTTTCAAGACGACAGCTTCGATGTCGACGAGTCGGGTAGTCCCGAGCTGATGATTACGGCCAAGAGCTTCTATGCAGGGACATTGTTACCTTATTCTCTACAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG ATGAATGGCGCTACAGCAACAGATTCTGAAGCAGACATCTCTGAATATGTCGAAGTTGATCCCACCGGCAGATATGGAAGATACAATGATGTTCTTGGCAAAGGAGCATCCAAGACAGTTTACAGAGCTTTCGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTCTGTGATTTCCTTCAAACCCCTGACGATCTCGAGAGGCTATACAGAGAAATCCATTTATTGAAGACGCTAAAACATAAGAACATAATGAAATTCTGTTCTTCCTGGGTCGACACTGCTAATAGAAACATTAACTTCGTTACAGAGATGTTCACTTCCGGGACTCTCAGACAATACAGGCTGAAGCACAAGAGAGTGAATATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTACAAGGGCTTCATTATCTTCATAGCCATGATCCTCCTCGAGATGGCGATGAATCACATGGAGGAGCATCAGAACAGCTGAAGTTCAAGAAGGAAGAAAGTAGTGTACATAAGAACAATAATGATCATCAAACAGAATTCCGAATGAGAAACTCGAGCTCATCGAATCGTTTGGTGTCATTTGCCGATGATCCTGAGAACGAGATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGTTAAGGGATCAACAATTAGGAGTCAAGGTAAAATCTTTCAGCTTACAGCCGAATCCGAACCTTGCCGAGACTGACCGTGGAGCTTTCGTATCGTTGCTTTCACCAAATATCAATGAAGCAGCAAAACATAAGGCTGGTATCACTTCACATTCCCCTCATGTTGCTGCTGACAACGTGTTGGAAAACCGAACCTTTCAAGACGACAGCTTCGATGTCGACGAGTCGGGTAGTCCCGAGCTGATGATTACGGCCAAGAGCTTCTATGCAGGGACATTGTTACCTTATTCTCTACAAAGAGCAACCTCACTTCCTGTTGATGCTATAGACTTTTAG MNGATATDSEADISEYVEVDPTGRYGRYNDVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPDDLERLYREIHLLKTLKHKNIMKFCSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILQGLHYLHSHDPPRDGDESHGGASEQLKFKKEESSVHKNNNDHQTEFRMRNSSSSNRLVSFADDPENEIRQELRWLKAKYQMQLRELRDQQLGVKVKSFSLQPNPNLAETDRGAFVSLLSPNINEAAKHKAGITSHSPHVAADNVLENRTFQDDSFDVDESGSPELMITAKSFYAGTLLPYSLQRATSLPVDAIDF
BLAST of Cp4.1LG12g01970 vs. Swiss-Prot
Match: WNK1_ARATH (Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 7.6e-71 Identity = 125/140 (89.29%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. Swiss-Prot
Match: WNK9_ARATH (Probable serine/threonine-protein kinase WNK9 OS=Arabidopsis thaliana GN=WNK9 PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 1.3e-67 Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. Swiss-Prot
Match: WNK1_ORYSJ (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. japonica GN=WNK1 PE=2 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.8e-65 Identity = 121/150 (80.67%), Postives = 130/150 (86.67%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. Swiss-Prot
Match: WNK1_ORYSI (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2) HSP 1 Score: 250.4 bits (638), Expect = 2.8e-65 Identity = 121/150 (80.67%), Postives = 130/150 (86.67%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.5e-58 Identity = 103/138 (74.64%), Postives = 124/138 (89.86%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TrEMBL
Match: A0A0A0K7F3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G234730 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.8e-72 Identity = 136/150 (90.67%), Postives = 141/150 (94.00%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TrEMBL
Match: A0A087H6Z8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G043900 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 127/149 (85.23%), Postives = 139/149 (93.29%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TrEMBL
Match: A0A078HQ33_BRANA (BnaC03g34010D protein OS=Brassica napus GN=BnaC03g34010D PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TrEMBL
Match: A0A0D3B9Q4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TrEMBL
Match: A0A078CBD9_BRANA (BnaA03g28850D protein OS=Brassica napus GN=BnaA03g28850D PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TAIR10
Match: AT3G04910.1 (AT3G04910.1 with no lysine (K) kinase 1) HSP 1 Score: 268.9 bits (686), Expect = 4.3e-72 Identity = 125/140 (89.29%), Postives = 135/140 (96.43%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TAIR10
Match: AT5G28080.2 (AT5G28080.2 Protein kinase superfamily protein) HSP 1 Score: 258.1 bits (658), Expect = 7.6e-69 Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TAIR10
Match: AT3G22420.2 (AT3G22420.2 with no lysine (K) kinase 2) HSP 1 Score: 227.3 bits (578), Expect = 1.4e-59 Identity = 103/138 (74.64%), Postives = 124/138 (89.86%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TAIR10
Match: AT3G48260.1 (AT3G48260.1 with no lysine (K) kinase 3) HSP 1 Score: 202.2 bits (513), Expect = 4.9e-52 Identity = 94/142 (66.20%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. TAIR10
Match: AT1G49160.2 (AT1G49160.2 Protein kinase superfamily protein) HSP 1 Score: 198.7 bits (504), Expect = 5.5e-51 Identity = 89/135 (65.93%), Postives = 113/135 (83.70%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. NCBI nr
Match: gi|659092611|ref|XP_008447143.1| (PREDICTED: probable serine/threonine-protein kinase WNK9 [Cucumis melo]) HSP 1 Score: 287.0 bits (733), Expect = 4.3e-74 Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. NCBI nr
Match: gi|449444242|ref|XP_004139884.1| (PREDICTED: probable serine/threonine-protein kinase WNK9 [Cucumis sativus]) HSP 1 Score: 280.4 bits (716), Expect = 4.0e-72 Identity = 136/150 (90.67%), Postives = 141/150 (94.00%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. NCBI nr
Match: gi|1009117649|ref|XP_015875430.1| (PREDICTED: probable serine/threonine-protein kinase WNK9 [Ziziphus jujuba]) HSP 1 Score: 273.1 bits (697), Expect = 6.5e-70 Identity = 130/149 (87.25%), Postives = 139/149 (93.29%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. NCBI nr
Match: gi|674245135|gb|KFK37900.1| (hypothetical protein AALP_AA3G043900 [Arabis alpina]) HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69 Identity = 127/149 (85.23%), Postives = 139/149 (93.29%), Query Frame = 1
BLAST of Cp4.1LG12g01970 vs. NCBI nr
Match: gi|645235538|ref|XP_008224319.1| (PREDICTED: probable serine/threonine-protein kinase WNK9 [Prunus mume]) HSP 1 Score: 271.2 bits (692), Expect = 2.5e-69 Identity = 131/149 (87.92%), Postives = 138/149 (92.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |