Cp4.1LG12g01670 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCATCTGGACGAATCATTAATACTCTCGGCTTCTTCTCCCCATTTACAAGGATACTCTAGGGTTCACGATTTCTTCAGTGTTCTTCAACTATCTTCTTTCTGTAAAATGTCTTCAATTGGAACATCCAAGGGAATTCTGGAGATCGCCAAGTTCGGGATTTATGTTACTATACCGATCTTTTTAATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAAATTCATTGGCAAAGTAAGTGTCTATTTCCCTTTCTTTCTCCCCTAAAATTATGTTTGTGGATCTGCACATAGTTATATATGGACTGGTTATTGACAAACATTTTCCCTTGTTTCGGGTGGAGGTATCCTGTAATTGCTGATTGCTGTTAAGATTATCTGTGCGTCGTTTAATTTCATTTCTTTTAGAATTTATCGAGCTGTTAGGGATTTGCTATGGGAAATTCACTGGTTTTTCAAGGTATTGGAACTCGTTGATGATTCACCATCTTTTGTGAATGACAGAATAAAATATAACAGAGAGTAGTTTATGGGGAAAAAAAGTTTTCAATGATGCTCATACTGAGAGTGGGGAGTTTGGATAAATGAAGAACGTGTTTATATTTGGTTAAATTACAAATTTAGTAGTTTTTAAATTACAAGTTTAGTCTCTCCATTCCTAGCACAAAATTGAACCTTCAACAATTCATTAAGCATAAAATCTAAATCTATTTCTGTAGATCAATTAATTTTTAGAGCCTCACACACTAATGAAAGTTAAGGCACCTTATAGACATAAGATTGAAACTTTGGAGACCTATTAGACACTTTTGAAAGTTAGTAGACCAAATAAGCACAAATTTCAAAGTTTAGGGGTAATTGAACCTTTATATTTTCTTAATTGATTTAGCTCTAGCTTTGTTCATTTTATGCTTGTATCCTCCATGGGTTGATGAATCTATGAGCGTTCCAGGCAATATTGAACCACAGAAGTTACTTAAAATACATTTTGTTAGCGAATTCGAGCCTTTCATATGAATTGGGCAGTTCATTTGTCAGCATTTTCAGCTTCATTAGAAGTAAAAACTATCGATACAATATTATTGTTCTTATCTTCACAAGCATTAGTTCTTATGTTTTACTATATAATATCAAGTGATAGGGTTTAATTGAATTACTTCCTCTTCTGATAGTCTTATATAGTGTATCCTCCCGAGGGACCGAGGCCTCCGTCTCCAGAAGAAGTAAGAGAGATGGCACGCGAATTGGCTCGAAAGAACAACATTCGCTGATGAAGTGAGTAATGCAGCATTTAAGTCAAATTTTCAGGGTTGTCGTGTTGATTGTTTCACATGTATTTATCTGTTTATATAGTATTTGGTGACTATCAATATTTAGGAGCAACTATGAATCAGCCTTTGGTTAGTTCAGGTGGGATAAAGATGATAAGGGCCAAACTCAACTTGCTGAGATAAACAGCCTATCTGTACTATGGTCCCGCTACTGCTCTAACTGTGGTAATATGTCTGTGTAATAATGGGGGAAAAAGTCTTATTTAGATCAATGTGATGGGATTGATACACAGTGATGCTGTTTTTCTTAATAAAGTAGAACTACCTAAGACCAATATGTTTCTATTTCCTTCTCTAAAACTCCCTCCAACTCCCTTCCCTGTATTTCACCTCTGATGACGACAATGCTCTCTTCCATGTCTTCTTCCTCTGGTGAGAGCAACGGTGACAACGAGTAGAGTTGTTTCTTCTGTCTCTAGAGGTCGAACGAGCGAGAAAAGCAATAAATAATCCTGAGAAAGGGTTGGTGACACAGGTTAGAAAGCTTTGTTTTGAAGAACTTGGTCAAATTTCATTTTTAAATCTGGAATGTGAATGGAAACATGTTCTATGTGGAGATCAATGATTTTGAAGCATACTAGTTTTGTTCTATTTTGTTATTATACGTGAGATCACACATCAGTTAGAGAAAGAAACGAAACATTTCTTTTAAGGGTGTAAAAACTTCTCTTTGGTAGAGAATATCTGTTAGCGATAGACT TCCTTCATCTGGACGAATCATTAATACTCTCGGCTTCTTCTCCCCATTTACAAGGATACTCTAGGGTTCACGATTTCTTCAGTGTTCTTCAACTATCTTCTTTCTGTAAAATGTCTTCAATTGGAACATCCAAGGGAATTCTGGAGATCGCCAAGTTCGGGATTTATGTTACTATACCGATCTTTTTAATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAAATTCATTGGCAAATCTTATATAGTGTATCCTCCCGAGGGACCGAGGCCTCCGTCTCCAGAAGAAGTAAGAGAGATGGCACGCGAATTGGCTCGAAAGAACAACATTCGCTGATGAATATTTGGTGACTATCAATATTTAGGAGCAACTATGAATCAGCCTTTGGTTAGTTCAGGTGGGATAAAGATGATAAGGGCCAAACTCAACTTGCTGAGATAAACAGCCTATCTGTACTATGGTCCCGCTACTGCTCTAACTGTGGTAATATGTCTGTGTAATAATGGGGGAAAAAGTCTTATTTAGATCAATGTGATGGGATTGATACACAGTGATGCTGTTTTTCTTAATAAAGTAGAACTACCTAAGACCAATATGTTTCTATTTCCTTCTCTAAAACTCCCTCCAACTCCCTTCCCTGTATTTCACCTCTGATGACGACAATGCTCTCTTCCATGTCTTCTTCCTCTGGTGAGAGCAACGGTGACAACGAGTAGAGTTGTTTCTTCTGTCTCTAGAGGTCGAACGAGCGAGAAAAGCAATAAATAATCCTGAGAAAGGGTTGGTGACACAGGTTAGAAAGCTTTGTTTTGAAGAACTTGGTCAAATTTCATTTTTAAATCTGGAATGTGAATGGAAACATGTTCTATGTGGAGATCAATGATTTTGAAGCATACTAGTTTTGTTCTATTTTGTTATTATACGTGAGATCACACATCAGTTAGAGAAAGAAACGAAACATTTCTTTTAAGGGTGTAAAAACTTCTCTTTGGTAGAGAATATCTGTTAGCGATAGACT ATGTCTTCAATTGGAACATCCAAGGGAATTCTGGAGATCGCCAAGTTCGGGATTTATGTTACTATACCGATCTTTTTAATGTACACCTTCGCCAACAATAGCAAAAATCTCCAGAAATTCATTGGCAAATCTTATATAGTGTATCCTCCCGAGGGACCGAGGCCTCCGTCTCCAGAAGAAGTAAGAGAGATGGCACGCGAATTGGCTCGAAAGAACAACATTCGCTGA MSSIGTSKGILEIAKFGIYVTIPIFLMYTFANNSKNLQKFIGKSYIVYPPEGPRPPSPEEVREMARELARKNNIR
BLAST of Cp4.1LG12g01670 vs. TrEMBL
Match: A0A0A0LIL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G205950 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TrEMBL
Match: A0A061ENB5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020757 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.1e-28 Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TrEMBL
Match: A0A059B2N1_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H03183 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.8e-28 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TrEMBL
Match: A0A0D2UUT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G165000 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.7e-28 Identity = 64/74 (86.49%), Postives = 71/74 (95.95%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TrEMBL
Match: A0A0D2RFL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G046200 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.8e-28 Identity = 63/74 (85.14%), Postives = 71/74 (95.95%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TAIR10
Match: AT4G14615.1 (AT4G14615.1 unknown protein) HSP 1 Score: 121.7 bits (304), Expect = 1.9e-28 Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. TAIR10
Match: AT1G52825.1 (AT1G52825.1 unknown protein) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-25 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. NCBI nr
Match: gi|449466388|ref|XP_004150908.1| (PREDICTED: uncharacterized protein LOC101207372 [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. NCBI nr
Match: gi|659096800|ref|XP_008449294.1| (PREDICTED: uncharacterized protein LOC103491216 [Cucumis melo]) HSP 1 Score: 144.8 bits (364), Expect = 6.0e-32 Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. NCBI nr
Match: gi|1009119659|ref|XP_015876500.1| (PREDICTED: uncharacterized protein LOC107413139 [Ziziphus jujuba]) HSP 1 Score: 132.9 bits (333), Expect = 2.4e-28 Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. NCBI nr
Match: gi|590658716|ref|XP_007034931.1| (Uncharacterized protein TCM_020757 [Theobroma cacao]) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-28 Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 1
BLAST of Cp4.1LG12g01670 vs. NCBI nr
Match: gi|629094467|gb|KCW60462.1| (hypothetical protein EUGRSUZ_H03183, partial [Eucalyptus grandis]) HSP 1 Score: 132.1 bits (331), Expect = 4.0e-28 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |