Cp4.1LG12g01660 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g01660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSieve element occlusion protein 1
LocationCp4.1LG12 : 1034640 .. 1037004 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTATTTTATAGTGAAGAGCCAGATAAAAGGTTTAAGTGCAAGCGAGACAAGTGAAGATATTTTAAGATTGGTTTCTTACGAAAATGAAGATGGTTGGGCAGTTGTTACGATAGGCTCAGCCCCTTTGTTAGTTGGTAATGACATTTTGATTTTGAGATTGTTTGATGATTTCCCAAATTGGAAACAAAATTTGCACTTCAAGGCTTTCCCCAATGCTTTTAGAGACTCCTTCAATGAGCTAGCGTTGAAGACTCATGAATGTGATCGAGTTATTTTTCCTGAATTTAGTGGATGGATTCCTATGATTGTCAACTGTCCAGGATGTCCTCGTTTCATGCAGAAGGACATTGCTTTTAAATGTTGTCATGGTGGCTCTCGTATGTGATCATCCAAAGTGAGTATTATATATCTTTTTATTATCATATATTACTACTACTAACACTATTACGTACTATAAGTGATACCATTTTTGGTGGTCATCAAGTTCTATGCNGAGTTTTTATTTAGTTTCTTAATTCATTAAAAATGTTAAATTTTTTTTTTTCAGGAATCAGCCACAGGTATATTTGAATGAATTGTCGAACAAAATTACGAGCGTACTCACCGACATTGAAAGGCAGNCGTTATCATCGATTGAATATTTGTATGATTTATGTTATTTCGATAAAATTATGAAATACTTTATCTTATTACTTCTCATTTTCCTCCCATCTCTTAAATTAGGAAGATACAGTAACAAATCTGTTATTATGNTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAAGAGGTAAAAGTTCTTAAATCAAGTAACACAAATATAAAAGTTGATGAACGAAACTTAAAAATGTATGTTTTTACAGGTTGGTATTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGTTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATGTTTATGATGAATTGAAAACTAGAGGCACTAATTATGAGATAGTTTGGATTCCAATTATCCCGTACATCACAAGATGGGATGGAGACAGAAAAGACTTCCCCATTCATGTCCTACTCTATAACATCTCTACAAATAGTTGTGATCATGCCGTGATCAAAAGAACATGACAAACCGAGTCGATCGATTTGAGTTTTTATTTAGTTTCTTAATTCATTAAAAATGTTAAATTTTTTTTTTTCAGGAATCAGCCACAGGTATATTTGAATGAATTGTCGAACAAAATTACGAGCGTACTCACCGACATTGAAAGGCAGCTATACGACATCCGAGTTCAGCACGGTGGAATATACTTTATAGCTCCATGATGTTATTGTTCGTTAATTAACAAGTGACCTGAAAAATAACGTTAAATTTGTTGTGTTTCTAATGACAGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCACACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAGGAGGTAAAAGTTCTTAAATCAAGTAACACAACTATAAAAGTTGATGAACGAAACTTAAAAATGTATGTTTTTACAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGCTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATGTTTATGATGAATTGAAAACTAGAGGCACTAATTATGAGATAGTTTGGATTCCAATTATCCCGAAGCCTTATCATGGAGATGATCGCAAGAGATATGAGTATTTGCGTTCTACAATGAAGTGGTACTCAATCCAGTTTACTACAAGAATATCTGGCATGAGATACATCGAGGAGAAGTGGCAATTTAGAGAAGATCCATTAGTTGTGGTACTCAACCCAAATTCTAAAGTAGAATTCATGAATGCAATTCATCTAATTCGAGTTTGGGAAAATGAAGCTATCCCATTTACACAAGCAAGAACTGAATCTTTACTCAAAAAACATTGGCCCGAGTCAACTCTCCACAAATTCACTCACCAACCAAGGCTACCAAATTTGGTATGTATAGTACAATCATTCTCTATTTCTTTTCTTTTGATATCGTAAATGTTTAAGAACAATTTAGAACTTCGGATGAAAATTAAGACTTCAATAATGAAAATTTGGATCATCAAATCATTCCAAGTTACTGCTATACCAACTTAGGTCAACATTTACTCTAAGGGTAGTTTTCAAACTTTTATAAGAAGTCAATAAGTTTATTTTATTTTATTTTTTTTAATTGTTTAGACGGGTTTAGATTGA

mRNA sequence

ATGGGGAATCAGCCACAGGTTGGTATTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGTTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATGAATCAGCCACAGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCACACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAGGAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGCTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATACGGGTTTAGATTGA

Coding sequence (CDS)

ATGGGGAATCAGCCACAGGTTGGTATTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGTTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATGAATCAGCCACAGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCACACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAGGAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGATATTGCTCATTTCGGGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATACGGGTTTAGATTGA

Protein sequence

MGNQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIHNTGLD
BLAST of Cp4.1LG12g01660 vs. TrEMBL
Match: I6V4B3_CUCMA (Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  +++ LS K   +    LD+ E  ++ +  +   EEVDLYRWLVDHIEH+ T+I 
Sbjct: 262 NQPQRYLND-LSEKMARV----LDVLEKHLETLREQH--EEVDLYRWLVDHIEHYRTDIT 321

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIHN 118
           LVV KLLSGK ET P+IDGST +EVG+HESLSGKNVIL+ISGLDISEDDIKAIHN
Sbjct: 322 LVVPKLLSGKTETKPLIDGSTLREVGIHESLSGKNVILVISGLDISEDDIKAIHN 369

BLAST of Cp4.1LG12g01660 vs. TrEMBL
Match: A0A0A0LIA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-27
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = 1

Query: 42  EEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILL 101
           EEVDLYRWLVDHIEH+HT+I LVV KLLSGKPET P+IDG+T +EV VHESLSGK VIL+
Sbjct: 295 EEVDLYRWLVDHIEHYHTDITLVVPKLLSGKPETKPLIDGTTHREVSVHESLSGKYVILI 354

Query: 102 ISGLDISEDDIKAIH 117
           ISGLDI+EDDIKA H
Sbjct: 355 ISGLDITEDDIKAFH 369

BLAST of Cp4.1LG12g01660 vs. TrEMBL
Match: E5GC85_CUCME (Putative uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-27
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K       G  ++E +   +      EEVDLYRWLVDHIEH+HT+I 
Sbjct: 263 NQPQRYLNE-LSEK------IGFVLAELEKHLVAIREQFEEVDLYRWLVDHIEHYHTDIT 322

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIH 117
            V++KLLSGKPET P+ DG+T +EV VHESLSGK VIL+ISGLDISEDDI+A H
Sbjct: 323 TVIAKLLSGKPETKPLFDGTTHREVNVHESLSGKYVILIISGLDISEDDIRAFH 369

BLAST of Cp4.1LG12g01660 vs. TrEMBL
Match: A0A0A0LIL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-26
Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K  I+    L + E  + AI  +   EEVDLYRWLVDHIEH+ T+I 
Sbjct: 262 NQPQRYLNE-LSEKMAIV----LAVLEKHLDAIREQH--EEVDLYRWLVDHIEHYQTDIT 321

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIH 117
           LV+ KLLSGKPET P+ DGS+ KEV VHESL GKNVIL+ISGLDIS DD+ AIH
Sbjct: 322 LVLPKLLSGKPETKPLFDGSSLKEVTVHESLLGKNVILVISGLDISVDDLTAIH 368

BLAST of Cp4.1LG12g01660 vs. TrEMBL
Match: A0A0A0LKR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196900 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24
Identity = 65/115 (56.52%), Postives = 85/115 (73.91%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K  I+    L + E  + AI  +   E+VDLYRWLVDHI+H+HT+I 
Sbjct: 262 NQPQKYLNE-LSEKIAIV----LSVLEKHLDAIREQF--EDVDLYRWLVDHIDHYHTDIT 321

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIHN 118
           LV+ KLL+GK E  P+IDGST +EV + ESL+GKNVIL+IS L ISE+DIKA+H+
Sbjct: 322 LVIPKLLTGKIEAKPLIDGSTLREVSIQESLAGKNVILVISELSISEEDIKALHH 369

BLAST of Cp4.1LG12g01660 vs. NCBI nr
Match: gi|393191331|gb|AFN06074.1| (sieve element occlusion protein 1 [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-29
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  +++ LS K   +    LD+ E  ++ +  +   EEVDLYRWLVDHIEH+ T+I 
Sbjct: 262 NQPQRYLND-LSEKMARV----LDVLEKHLETLREQH--EEVDLYRWLVDHIEHYRTDIT 321

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIHN 118
           LVV KLLSGK ET P+IDGST +EVG+HESLSGKNVIL+ISGLDISEDDIKAIHN
Sbjct: 322 LVVPKLLSGKTETKPLIDGSTLREVGIHESLSGKNVILVISGLDISEDDIKAIHN 369

BLAST of Cp4.1LG12g01660 vs. NCBI nr
Match: gi|659130462|ref|XP_008465186.1| (PREDICTED: uncharacterized protein LOC103502848 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-27
Identity = 72/114 (63.16%), Postives = 86/114 (75.44%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K  I+    L + E  + AI  +   EEVDLYRWLVDHIEH+HT+I 
Sbjct: 304 NQPQRYLNE-LSEKMAIV----LAVLEKHLIAIREQH--EEVDLYRWLVDHIEHYHTDIT 363

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIH 117
           LV+ KLLSGKPET P+ DGS+ K+V V ESLSGKNVIL+ISGLDIS DD+KAIH
Sbjct: 364 LVLPKLLSGKPETKPLFDGSSLKQVTVQESLSGKNVILVISGLDISNDDLKAIH 410

BLAST of Cp4.1LG12g01660 vs. NCBI nr
Match: gi|778668884|ref|XP_004150431.2| (PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 4.2e-27
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = 1

Query: 42  EEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILL 101
           EEVDLYRWLVDHIEH+HT+I LVV KLLSGKPET P+IDG+T +EV VHESLSGK VIL+
Sbjct: 295 EEVDLYRWLVDHIEHYHTDITLVVPKLLSGKPETKPLIDGTTHREVSVHESLSGKYVILI 354

Query: 102 ISGLDISEDDIKAIH 117
           ISGLDI+EDDIKA H
Sbjct: 355 ISGLDITEDDIKAFH 369

BLAST of Cp4.1LG12g01660 vs. NCBI nr
Match: gi|307136252|gb|ADN34084.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-27
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K       G  ++E +   +      EEVDLYRWLVDHIEH+HT+I 
Sbjct: 263 NQPQRYLNE-LSEK------IGFVLAELEKHLVAIREQFEEVDLYRWLVDHIEHYHTDIT 322

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIH 117
            V++KLLSGKPET P+ DG+T +EV VHESLSGK VIL+ISGLDISEDDI+A H
Sbjct: 323 TVIAKLLSGKPETKPLFDGTTHREVNVHESLSGKYVILIISGLDISEDDIRAFH 369

BLAST of Cp4.1LG12g01660 vs. NCBI nr
Match: gi|659130458|ref|XP_008465183.1| (PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-27
Identity = 68/114 (59.65%), Postives = 83/114 (72.81%), Query Frame = 1

Query: 3   NQPQVGIHESLSGKNVILFISGLDISEDDIKAIHNESATEEVDLYRWLVDHIEHFHTNIA 62
           NQPQ  ++E LS K       G  ++E +   +      EEVDLYRWLVDHIEH+HT+I 
Sbjct: 263 NQPQRYLNE-LSEK------IGFVLAELEKHLVAIREQFEEVDLYRWLVDHIEHYHTDIT 322

Query: 63  LVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVILLISGLDISEDDIKAIH 117
            V++KLLSGKPET P+ DG+T +EV VHESLSGK VIL+ISGLDISEDDI+A H
Sbjct: 323 TVIAKLLSGKPETKPLFDGTTHREVNVHESLSGKYVILIISGLDISEDDIRAFH 369

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
I6V4B3_CUCMA1.4e-2964.35Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1[more]
A0A0A0LIA4_CUCSA2.9e-2781.33Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1[more]
E5GC85_CUCME5.0e-2759.65Putative uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=... [more]
A0A0A0LIL1_CUCSA2.5e-2662.28Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1[more]
A0A0A0LKR0_CUCSA1.8e-2456.52Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|393191331|gb|AFN06074.1|2.0e-2964.35sieve element occlusion protein 1 [Cucurbita maxima][more]
gi|659130462|ref|XP_008465186.1|3.2e-2763.16PREDICTED: uncharacterized protein LOC103502848 [Cucumis melo][more]
gi|778668884|ref|XP_004150431.2|4.2e-2781.33PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus][more]
gi|307136252|gb|ADN34084.1|7.2e-2759.65hypothetical protein [Cucumis melo subsp. melo][more]
gi|659130458|ref|XP_008465183.1|7.2e-2759.65PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g01660.1Cp4.1LG12g01660.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g01660Melon (DHL92) v3.6.1cpemedB166
Cp4.1LG12g01660Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g01660Silver-seed gourdcarcpeB0322
Cp4.1LG12g01660Silver-seed gourdcarcpeB0331
Cp4.1LG12g01660Silver-seed gourdcarcpeB0450
Cp4.1LG12g01660Silver-seed gourdcarcpeB1087
Cp4.1LG12g01660Silver-seed gourdcarcpeB1328
Cp4.1LG12g01660Cucumber (Chinese Long) v3cpecucB0145
Cp4.1LG12g01660Cucumber (Chinese Long) v3cpecucB0152
Cp4.1LG12g01660Cucumber (Chinese Long) v3cpecucB0153
Cp4.1LG12g01660Wax gourdcpewgoB0172
Cp4.1LG12g01660Wax gourdcpewgoB0183
Cp4.1LG12g01660Wax gourdcpewgoB0189
Cp4.1LG12g01660Cucurbita pepo (Zucchini)cpecpeB169
Cp4.1LG12g01660Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG12g01660Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG12g01660Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG12g01660Cucumber (Gy14) v1cgycpeB0672
Cp4.1LG12g01660Cucumber (Gy14) v1cgycpeB1023
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB259
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB519
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB600
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB810
Cp4.1LG12g01660Cucurbita maxima (Rimu)cmacpeB895
Cp4.1LG12g01660Cucurbita moschata (Rifu)cmocpeB223
Cp4.1LG12g01660Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g01660Cucurbita moschata (Rifu)cmocpeB549
Cp4.1LG12g01660Cucurbita moschata (Rifu)cmocpeB765
Cp4.1LG12g01660Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g01660Wild cucumber (PI 183967)cpecpiB126
Cp4.1LG12g01660Wild cucumber (PI 183967)cpecpiB134
Cp4.1LG12g01660Cucumber (Chinese Long) v2cpecuB127
Cp4.1LG12g01660Cucumber (Chinese Long) v2cpecuB133
Cp4.1LG12g01660Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g01660Bottle gourd (USVL1VR-Ls)cpelsiB121
Cp4.1LG12g01660Watermelon (Charleston Gray)cpewcgB138
Cp4.1LG12g01660Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g01660Watermelon (97103) v1cpewmB151
Cp4.1LG12g01660Watermelon (97103) v1cpewmB161
Cp4.1LG12g01660Melon (DHL92) v3.5.1cpemeB137
Cp4.1LG12g01660Melon (DHL92) v3.5.1cpemeB142
Cp4.1LG12g01660Cucumber (Gy14) v2cgybcpeB175
Cp4.1LG12g01660Cucumber (Gy14) v2cgybcpeB302