Cp4.1LG12g01270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g01270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L14, putative
LocationCp4.1LG12 : 830458 .. 832122 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGAGTATCCAATTAATTTGAGAGCCCTAGAGAAAAGTTATTATAAAATGCAGTAGGACAGCAGCTTCTCCTTCCTTCCTCCATCGGCGCCGCTGCTCTCCACAGTTGTAAACCTCCCACAAGCCGCAAGAATGGTGAGATTCTCTCTGTAATTCATTTACTGCTCCTTTCTCTTTAACTCTGCTTTGTTTTCCATTGTTTCAACCTGTTCATTTTGGTCTTTGGTTTTGTTTGTTTAGCCGTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCCCTCGTCAACTACGGTGAAGATTACGGAAAGCTTGTTGTAATCGTTGATGTCATTGACCAGAATCGGGTAGGCACTCGTAATATCGTTTTATTCCATTTTTTTTTGTAGATGTTATTCTGATTGTCTTTTAGCAACTCAACAGGAAAAGGCCGTAATGTTATTCTTTTAATAGCTATATGGAATAACAGTAGCGTTCGTAGCTTCTGTGGAAATTCGTATTATAGGACTTGGTGATGTAACTGCTGGATATTGAACTAGTTGTGTTTCAGTCTTCATGATGTTTTTTTCTTTTTTGCCATACAATGTAATCCTTGGACTACTGGATATTGAGTATTTGAAACTTAAGAACCGGTGGATTTGTACACTATTTCATTTGTATAGTGTTGATGTTGGTGGTTTTCATTTCCAGCATTCTCAATTGGTGGATTGAAGTTCTTTGATGCATAGAACTTGGGTTTTTGTTGCTTATCTGCAGAAGTATTAATTTTCTATTCTCTAGTAATTTTGGAACTTTTTGGAATGAGTGAATTTCATGACTAGTTTCTTAATGGAGCCTTTTGTTAAATCATCTGCATGACTAGTTTGATTTTATGTTTGGACAGGCTCTGGTTGATGCCCCTGATATGGAGCGGTCTCAAATGAATTTTAAGAGACTTTCCCTGACAGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGTTGATTGAAGCAATGAAAGCCGGGGGTATGGAGTAATTCCTTGCAATCTCATCTCCTACTTATATTGTTTTAGTATGTGCTTAATAATTTTTCTATCCAATAATCAGATGTTCAAAAGAAATGGGAGGATAGCTCTTGGGGAAGGAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCGAAGATTAAGGTTCGTGCTGATTACCTAACGATGCACCACATTTTTTTAAGAACAATTGATAACATTTGAACTTATGGGTCTTGGTTTATGCAGAGGGCTGGATTGGTTAGACAAGAGCTCTCCAAGTTGAAGAAGGCCGAGGCTTAGAGGTTCATTTTTTCAACGGATTCTCTCATTTTGCTGTCATCTTTCATTTAAACTACTGTAGGTCTTCGTTTTTTTGTTCCAAACTTTTGGTAGCAGTCTGTGTTCAACTTCTCACATTTAAATTATAGTACGCCAATTTCTTATTTGGATTTCAATTGTCACAGCTTTATCACCCTCTATTTATAAGGTCCTTGTTTAAATTGGCTTGAATGATAGTTCTGGTTTTTCATTTCTTTAAGAAAGTCACTTTACTGTGAGTTAATGTCTCTATGATTTGCCCATTATTCTTCATGGTAGTTGATTAAGTAGCTTTTTTAGTGTAT

mRNA sequence

TGATGAGTATCCAATTAATTTGAGAGCCCTAGAGAAAAGTTATTATAAAATGCAGTAGGACAGCAGCTTCTCCTTCCTTCCTCCATCGGCGCCGCTGCTCTCCACAGTTGTAAACCTCCCACAAGCCGCAAGAATGCCGTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCCCTCGTCAACTACGGTGAAGATTACGGAAAGCTTGTTGTAATCGTTGATGTCATTGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGGTCTCAAATGAATTTTAAGAGACTTTCCCTGACAGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGTTGATTGAAGCAATGAAAGCCGGGGATGTTCAAAAGAAATGGGAGGATAGCTCTTGGGGAAGGAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCGAAGATTAAGAGGGCTGGATTGGTTAGACAAGAGCTCTCCAAGTTGAAGAAGGCCGAGGCTTAGAGGTTCATTTTTTCAACGGATTCTCTCATTTTGCTGTCATCTTTCATTTAAACTACTGTAGGTCTTCGTTTTTTTGTTCCAAACTTTTGGTAGCAGTCTGTGTTCAACTTCTCACATTTAAATTATAGTACGCCAATTTCTTATTTGGATTTCAATTGTCACAGCTTTATCACCCTCTATTTATAAGGTCCTTGTTTAAATTGGCTTGAATGATAGTTCTGGTTTTTCATTTCTTTAAGAAAGTCACTTTACTGTGAGTTAATGTCTCTATGATTTGCCCATTATTCTTCATGGTAGTTGATTAAGTAGCTTTTTTAGTGTAT

Coding sequence (CDS)

ATGCCGTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCCCTCGTCAACTACGGTGAAGATTACGGAAAGCTTGTTGTAATCGTTGATGTCATTGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGGTCTCAAATGAATTTTAAGAGACTTTCCCTGACAGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGTTGATTGAAGCAATGAAAGCCGGGGATGTTCAAAAGAAATGGGAGGATAGCTCTTGGGGAAGGAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCGAAGATTAAGAGGGCTGGATTGGTTAGACAAGAGCTCTCCAAGTTGAAGAAGGCCGAGGCTTAG

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA
Homology
[Close]
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-55
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.4e-54
Identity = 108/133 (81.20%), Postives = 122/133 (91.73%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDMERS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKK+LI+A++A DV+ KW  SSWGRKLIVKK RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKK  A
Sbjct: 121 VRQELAKLKKTAA 133

[Close]
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-26
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRA 120
           K       K   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELSKLKKA 132
            L++ E  KL+KA
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-25
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   ++R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 120
           K+ DI R     E+     A  V + +  S WG+KL  +++RA+L+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELSKLK 130
           +  +  EL+KLK
Sbjct: 121 SKAINAELAKLK 132

[Close]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-61
Identity = 125/133 (93.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWEDSSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKK+++
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 3.8e-60
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+EAMKA DVQKKWEDSSWGRKL+VK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKA 132
           VRQEL+KLKK+
Sbjct: 121 VRQELAKLKKS 131

[Close]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match: M5XHS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-57
Identity = 119/133 (89.47%), Postives = 127/133 (95.49%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKEL+ AM+A DV+KKWE+SSWGRKLIV+KRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELLAAMEAADVKKKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VR EL+KLKK  A
Sbjct: 121 VRTELAKLKKESA 133

[Close]
BLAST of Cp4.1LG12g01270 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-56
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of Cp4.1LG12g01270 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14)

HSP 1 Score: 213.8 bits (543), Expect = 6.6e-56
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match: gi|449458838|ref|XP_004147153.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 125/133 (93.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 68  MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 127

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWEDSSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 128 DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 187

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKK+++
Sbjct: 188 VRQELSKLKKSQS 200

[Close]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 125/133 (93.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWEDSSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKK+++
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 5.4e-60
Identity = 123/131 (93.89%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+EAMKA DVQKKWEDSSWGRKL+VK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKA 132
           VRQEL+KLKK+
Sbjct: 121 VRQELAKLKKS 131

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g01270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL142_ARATH3.1e-5585.3860S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1[more]
RL141_ARATH1.2e-5484.6260S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1[more]
RL14_PEA4.4e-5481.20Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1[more]
RL14_LUMRU3.0e-2650.3860S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1[more]
RL14_GRIJA5.6e-2548.4860S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1[more]
BLAST of Cp4.1LG12g01270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIH9_CUCSA1.3e-6396.99Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1[more]
Q9SXL9_CUCSA1.3e-6396.99Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1[more]
A0A0A0L725_CUCSA1.5e-6193.98Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1[more]
A0A0A0L4D3_CUCSA3.8e-6093.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1[more]
M5XHS7_PRUPE1.3e-5789.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1[more]
BLAST of Cp4.1LG12g01270 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27090.11.7e-5685.38 Ribosomal protein L14[more]
AT2G20450.16.6e-5684.62 Ribosomal protein L14[more]
BLAST of Cp4.1LG12g01270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|5762251|dbj|BAA83469.1|1.8e-6396.99Csf-1 [Cucumis sativus][more]
gi|449458838|ref|XP_004147153.1|1.8e-6396.99PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus][more]
gi|659076099|ref|XP_008438500.1|2.2e-6193.98PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo][more]
gi|449432538|ref|XP_004134056.1|2.2e-6193.98PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus][more]
gi|449432536|ref|XP_004134055.1|5.4e-6093.89PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR008991Translation_prot_SH3-like_sf
IPR002784Ribosomal_L14e_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g01270.1Cp4.1LG12g01270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 45..117
score: 2.1
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 5..93
score: 1.77
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 4..85
score: 5.3
NoneNo IPR availablePANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 2..132
score: 6.0
NoneNo IPR availablePANTHERPTHR11127:SF3SUBFAMILY NOT NAMEDcoord: 2..132
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g01270Cucsa.255500Cucumber (Gy14) v1cgycpeB0670
Cp4.1LG12g01270Cucsa.383510Cucumber (Gy14) v1cgycpeB1007
Cp4.1LG12g01270CmaCh14G018180Cucurbita maxima (Rimu)cmacpeB259
Cp4.1LG12g01270CmaCh06G013150Cucurbita maxima (Rimu)cmacpeB810
Cp4.1LG12g01270CmoCh06G013220Cucurbita moschata (Rifu)cmocpeB765
Cp4.1LG12g01270CmoCh14G018580Cucurbita moschata (Rifu)cmocpeB223
Cp4.1LG12g01270Cla007598Watermelon (97103) v1cpewmB161
Cp4.1LG12g01270Cla021510Watermelon (97103) v1cpewmB151
Cp4.1LG12g01270Csa2G173070Cucumber (Chinese Long) v2cpecuB127
Cp4.1LG12g01270Csa3G134920Cucumber (Chinese Long) v2cpecuB134
Cp4.1LG12g01270MELO3C006411Melon (DHL92) v3.5.1cpemeB143
Cp4.1LG12g01270MELO3C023012Melon (DHL92) v3.5.1cpemeB137
Cp4.1LG12g01270ClCG05G004250Watermelon (Charleston Gray)cpewcgB138
Cp4.1LG12g01270ClCG06G007100Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g01270CSPI03G11830Wild cucumber (PI 183967)cpecpiB135
Cp4.1LG12g01270CSPI02G10220Wild cucumber (PI 183967)cpecpiB126
Cp4.1LG12g01270Lsi05G017410Bottle gourd (USVL1VR-Ls)cpelsiB120
Cp4.1LG12g01270MELO3C023012.2Melon (DHL92) v3.6.1cpemedB166
Cp4.1LG12g01270MELO3C031603.2Melon (DHL92) v3.6.1cpemedB170
Cp4.1LG12g01270CsaV3_3G011980Cucumber (Chinese Long) v3cpecucB0153
Cp4.1LG12g01270CsaV3_2G012650Cucumber (Chinese Long) v3cpecucB0145
Cp4.1LG12g01270Bhi01G000513Wax gourdcpewgoB0189
Cp4.1LG12g01270Bhi12G001415Wax gourdcpewgoB0172
Cp4.1LG12g01270CsGy3G011950Cucumber (Gy14) v2cgybcpeB302
Cp4.1LG12g01270Carg10975Silver-seed gourdcarcpeB1501
Cp4.1LG12g01270Carg16556Silver-seed gourdcarcpeB0331
Cp4.1LG12g01270Carg10096Silver-seed gourdcarcpeB0322
Cp4.1LG12g01270Carg06227Silver-seed gourdcarcpeB1328
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g01270Cp4.1LG17g02270Cucurbita pepo (Zucchini)cpecpeB169
Cp4.1LG12g01270Cp4.1LG03g09770Cucurbita pepo (Zucchini)cpecpeB184
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g01270Watermelon (Charleston Gray)cpewcgB150
Cp4.1LG12g01270Watermelon (97103) v1cpewmB147
Cp4.1LG12g01270Cucumber (Gy14) v2cgybcpeB175
Cp4.1LG12g01270Silver-seed gourdcarcpeB1087
Cp4.1LG12g01270Wax gourdcpewgoB0196
Cp4.1LG12g01270Cucurbita pepo (Zucchini)cpecpeB155
Cp4.1LG12g01270Cucurbita pepo (Zucchini)cpecpeB189
Cp4.1LG12g01270Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG12g01270Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g01270Cucurbita maxima (Rimu)cmacpeB519
Cp4.1LG12g01270Cucurbita maxima (Rimu)cmacpeB600
Cp4.1LG12g01270Cucurbita maxima (Rimu)cmacpeB895
Cp4.1LG12g01270Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g01270Cucurbita moschata (Rifu)cmocpeB549
Cp4.1LG12g01270Cucurbita moschata (Rifu)cmocpeB833
Cp4.1LG12g01270Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g01270Bottle gourd (USVL1VR-Ls)cpelsiB124