Cp4.1LG12g00430 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTAGAAGGCGACTACAAAATTTTCTACATCCTGAAAATAAAAGCAATGAGTGTTGGAAGCAACAAATTTAATTTTCCGAGGTCTTCACCATTTGGAACAAATGGGAATATCATTATTGACTCTGGCACGACGCTTACATTCTTACAACCGGACATCTTTGCTAGCTTCTCCCAGGCGATTTCCGAGGTGATGGACTTGAAGTCTACGACTAGTCCAATTGAAACCTTGGAGTATTGCTATGAGAGCACCACCGACGACTATAAGGTGCCGCCTGTCACAGCGCACTTTAAAGTTGGCGACGTGAATCTCAAGCGAGAAAACCTGTTCATTAGAGTGGCGGACGACGTCGTTTGCTTAGTATTTGTTGGCAACAACGGGAAAAACAACATGCAAATCTATGGCAATGTTGCGCACAGACTAACTTCTTGGTTGGCTATGATATCAAAAAATCGTCTGTTTCTTTCAAGCCAGCAAATTGTGCTGCCTCGTGATTATCATGTCGTTGTTATTATGATTTTCTATTGTTTGAACGACTTACGTTCTTCATTTTAA ATGTCTGTAGAAGGCGACTACAAAATTTTCTACATCCTGAAAATAAAAGCAATGAGTGTTGGAAGCAACAAATTTAATTTTCCGAGGTCTTCACCATTTGGAACAAATGGGAATATCATTATTGACTCTGGCACGACGCTTACATTCTTACAACCGGACATCTTTGCTAGCTTCTCCCAGGCGATTTCCGAGGTGATGGACTTGAAGTCTACGACTAGTCCAATTGAAACCTTGGAGTATTGCTATGAGAGCACCACCGACGACTATAAGGTGCCGCCTGTCACAGCGCACTTTAAAGTTGGCGACGTGAATCTCAAGCGAGAAAACCTGTTCATTAGAGTGGCGGACGACGTCGTTTGCTTAGTATTTGTTGGCAACAACGGGAAAAACAACATGCAAATCTATGGCAATGTTGCGCACAGACTAACTTCTTGGTTGGCTATGATATCAAAAAATCGTCTGTTTCTTTCAAGCCAGCAAATTGTGCTGCCTCGTGATTATCATGTCGTTGTTATTATGATTTTCTATTGTTTGAACGACTTACGTTCTTCATTTTAA ATGTCTGTAGAAGGCGACTACAAAATTTTCTACATCCTGAAAATAAAAGCAATGAGTGTTGGAAGCAACAAATTTAATTTTCCGAGGTCTTCACCATTTGGAACAAATGGGAATATCATTATTGACTCTGGCACGACGCTTACATTCTTACAACCGGACATCTTTGCTAGCTTCTCCCAGGCGATTTCCGAGGTGATGGACTTGAAGTCTACGACTAGTCCAATTGAAACCTTGGAGTATTGCTATGAGAGCACCACCGACGACTATAAGGTGCCGCCTGTCACAGCGCACTTTAAAGTTGGCGACGTGAATCTCAAGCGAGAAAACCTGTTCATTAGAGTGGCGGACGACGTCGTTTGCTTAGTATTTGTTGGCAACAACGGGAAAAACAACATGCAAATCTATGGCAATGTTGCGCACAGACTAACTTCTTGGTTGGCTATGATATCAAAAAATCGTCTGTTTCTTTCAAGCCAGCAAATTGTGCTGCCTCGTGATTATCATGTCGTTGTTATTATGATTTTCTATTGTTTGAACGACTTACGTTCTTCATTTTAA MSVEGDYKIFYILKIKAMSVGSNKFNFPRSSPFGTNGNIIIDSGTTLTFLQPDIFASFSQAISEVMDLKSTTSPIETLEYCYESTTDDYKVPPVTAHFKVGDVNLKRENLFIRVADDVVCLVFVGNNGKNNMQIYGNVAHRLTSWLAMISKNRLFLSSQQIVLPRDYHVVVIMIFYCLNDLRSSF
BLAST of Cp4.1LG12g00430 vs. Swiss-Prot
Match: CDR1_ARATH (Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.4e-21 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. Swiss-Prot
Match: ASPR1_ARATH (Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.5e-11 Identity = 42/136 (30.88%), Postives = 68/136 (50.00%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. Swiss-Prot
Match: ASPA_ARATH (Aspartyl protease family protein At5g10770 OS=Arabidopsis thaliana GN=At5g10770 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10 Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. Swiss-Prot
Match: ASPG1_ARATH (Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.7e-08 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TrEMBL
Match: A0A0A0K928_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078650 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.6e-32 Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TrEMBL
Match: A0A0A0K9V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078630 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-28 Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TrEMBL
Match: A0A072TU33_MEDTR (Eukaryotic aspartyl protease family protein OS=Medicago truncatula GN=MTR_8g096990 PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TrEMBL
Match: A0A151RGY3_CAJCA (Aspartic proteinase nepenthesin-1 OS=Cajanus cajan GN=KK1_036909 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.7e-22 Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TrEMBL
Match: I1M0U3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G198900 PE=3 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 9.7e-22 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TAIR10
Match: AT5G33340.1 (AT5G33340.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TAIR10
Match: AT1G64830.1 (AT1G64830.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20 Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TAIR10
Match: AT2G35615.1 (AT2G35615.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 88.2 bits (217), Expect = 5.8e-18 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TAIR10
Match: AT1G31450.1 (AT1G31450.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15 Identity = 48/144 (33.33%), Postives = 74/144 (51.39%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. TAIR10
Match: AT5G10770.1 (AT5G10770.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. NCBI nr
Match: gi|700191066|gb|KGN46270.1| (hypothetical protein Csa_6G078650 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 6.6e-32 Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. NCBI nr
Match: gi|778722025|ref|XP_004153020.2| (PREDICTED: aspartic proteinase CDR1-like [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 6.6e-32 Identity = 73/134 (54.48%), Postives = 95/134 (70.90%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. NCBI nr
Match: gi|659120454|ref|XP_008460202.1| (PREDICTED: uncharacterized protein LOC103499087 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 4.3e-31 Identity = 70/134 (52.24%), Postives = 97/134 (72.39%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. NCBI nr
Match: gi|700191064|gb|KGN46268.1| (hypothetical protein Csa_6G078630 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28 Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 1
BLAST of Cp4.1LG12g00430 vs. NCBI nr
Match: gi|922338035|ref|XP_013447007.1| (eukaryotic aspartyl protease family protein [Medicago truncatula]) HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |