Cp4.1LG11g11910 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g11910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	PHD finger alfin-like protein
Location	Cp4.1LG11 : 9739053 .. 9742517 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTAATTTTAATTTTAATTTTAATTTTAATTTTTTGTTCCCTCTCCTTTGAGAGAGAGAGAGAGTAAGAGGCGCCCAATCTTCAAAACCGCAACTGTAAGAACTCTCTCCTGCTACTGGATTTTCTTGGGCGTTCGGTTTTGATTTGCTGGTGCCTTTCTTCTCCATTGGTAATCAACCATTGCAGAAGTGCCTTTCTTGTTCTTCTGATGCTTTTCACTCTGCGTTTCTTCTTTCTTCCGTTTTCGATTTCCATAACCATTTCTCGCTGTTTGTTTCTTCTTTTCTGAATTCAGCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGGTCTTGTTCAATCTCACTTTTCCTTCTCCTCCTCATCTATTTCTGTCTTTTTGTTTTCAATTTTTAGGGTTCTTCTACCAGGCTTTCATGGCGCTTTACATTTCTAGTTAATTACTCTTCTCTCTTGCCATCTTTTTGCAGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGGTCTGAGCTCCATTCTTTGCATTCTTTCTATTTTACCTAACTTGTGGGTTTTCGTTTACTTGCAATTGCGGTTTGATAGTCAACACTGTACTTTATGTGTGTTAATTAATATTGTTTTGAAATCTTCTCTGTGGGGTATTCTCTTGATTCGTGAATTTTTGGTAATGAAAAAGACACGGTTACTTATTACTACTGATAGTGAGAGCCTCTAATTTGGTGAGATTTCAAAGAGCCACCTGCTTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATTGTAGCTGGAATCTGAGTTTTACCAGCTTTTTCATTAGTTATTTTGTTGGCAACNTGAGATTTCAAAGAGCCACCTGCTTCACACACACACACACACTCACATACACATTGTAGCTGGAATCTGAGTTTTACCAGCTTTTTCATTAGTTATTTTGTTGGCATCATATTTAAAGACGTTGTGAAATGTGAATGATACTTTAAATTTTGTTTGTAATCTCCAACTGTAGTTTCCAAGCTGGAATGTAGCAAGTTATTGTTATGCTTATTGGGACTTCAGTAGGNGTGAATGATACTTTAAATTTTGTTTGTAATCTCCAACTGTAGCTTCCAAGCTGGAATGTAGCAAGTTATTGTTATTGTTATTGGGACTTCAGTAGCTAGGAAGTTGGTGACATAAATACGTGCTTAGCTATGAATTTTCTTCGTACTTTCTGTTCTTGGCCACTCGAAGAATAAATGCAGTAAACATTGGGGACCCAATTACTTTTTTTAATAGCACTCCATGTAGCTATTTCTGCTTTTACGGACATCAGTGAACTTTTCAACTATTTACACAGCTGTTTCAAATTTCAGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGTACTTTCTGAACTAAATTTCCTGGCTGTCGCTGCCGCTGCGGCACCACAGTTACTTGTTACTACGTGTATGGCTTCGGTTTTGAAAATACAAAAGTTGTCTCTGATATTTAAAAAGGAAAAGGAAAACAAATTATTAGTTGTGCAGAGCGGTACTCTGATGTCTGGCATATCTCTTTATTAATTATGCATCTACCCGTTCTTTGAAGACTTCACAATATGGAGACTGACTGGTGGGCCATTAATCTTTATGTGTATAAGTGTTGCATTTTAACTGATAAATTTGGGTTAAATTGGTAAGATTATGAAGGCTTAAGTAAATCCTTGTGTTTCTCTTACAAAAAGATCAAAGAAATGTAGGCTTGGGAAAAAAGACACAAATTCATGCATTTTGTTTCTCGAAGTGTGATCATTTTCTCTTGTTNAAATCCTTGTGTTTCTCTTACAAAAAGATCAAAGAAATGTAGCTTGGGAAAAAAGACTCAAATTCATGCATTTTGTTTCTCGAAGTGTGATCATTTTCTCTTGTTCATATCATTATTTGCTAATTTTGTAGAATTGATTCATGATTCAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGGTAAAAAGAATTTTCTGTATCTTATTTCATTTTCATTCGTGAACAATGACATATGTCTCAATTGAGTTTGATGAAGAATTTTGGACCTTAGTGCTCGCAATCAGATAGTTTGGTACCCTATGCAATTGTTCTCACTTCAAGAACAGTAAACAGAATATAAGAGAAATTTACAAAGGAAAAAGAAAAGTTGAGAAAGTATCTGGACTTGCTTCTAAATCGCTATGCAGTAAATATTAGTTTCAGAAGCAAGGCATTGATGTGCACATTATTTATTTTGAAAACTAAGTCTTTGAATTTCAATGCATTACTCCTGATGGATTTATCTACAGCTCTATATGTCCAGTCGGTTTTCGTTATATATATGATCTTTTGACTGTATAACATTTGTTTAACTAATNATGGATTTATCTACAGCTCTATATGTCCAGTCGGTTTTCGTTCTATATATGATCTTTTGACTGGATAACATTTGTTTAACTAATTTTTTTTTTAACAAAATTAACATTATTAACAGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTATCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTATTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGAACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTGTTTAATTGTTTCTG

mRNA sequence

TTAATTTAATTTTAATTTTAATTTTAATTTTAATTTTTTAGAGAGAGTAAGAGGCGCCCAATCTTCAAAACCGCAACTGTAAGAACTCTCTCCTGCTACTGGATTTTCTTGGGCGTTCGGTTTTGATTTGCTGAATTCAGCGGACTTGGATTCCAGAAAACATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGATAATGATGGGTATCTCGTTAATTTTATTCATGTTGGATTAAGCTAACTTGTAGTCAGTCCAATATTAATCCATGTCCCCCCAGGGTATGTACTAATTGCGTTGGCTGGAATCTTATTTATTCGGATAACTTACAGGCTATTAAATGTATTCTATGTAATTCCCAACTGAGATACACAGATTGTTCTATATGTGCGAACCTGTCGGCTATGGAATCTGAAACACTATAATTTATCTTGTTTAATTGTTTCTG

Coding sequence (CDS)

ATGGATGGGGGAGTAGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCTGGAATGATTAGAGCTCTCACCACCGATGTCGTGGAATTTTATCAGCTTTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGACTCCCTAATGAACAGTGGGAAGTTAATTTGCCTGCGGAAGAAGTACCTCCAGAGGTTCCGGAACCAGCATTGGGCATTAACTTTGCTAGAGATGGGATGCAAAAAAAGGATTGGCTATCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTATTTTGGTTCTAGATTTGGCTGTGATAAATCTGACAGGAAACGCCTCTTTACGATGATAAATGATCTGCCCACTATATTTGAGGTTGTGACGGGAAGTGTGAAGAAACAGGGAAAAGACAAGTCATTGGTTTCAAATAACAGCAGCAGCAAATCCAGGACTGGCCCAAAGGGGAGAGATTCTGAATCAAGCAAGTTGTCTAATGGGTTGGCAAAAGATGAAGACGAGGGACTGAATGAGGAAGCTGAGGAGGAGCACGGGGAGACCTTATGTGGGGCATGCGGGGAGAATTATGCATCGGACGAGTTTTGGATATGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCAAGGGCCGAACATATCAAGCAATACAAATGCCCCTCGTGCAGCAATAAGAGGGCACGGCCCTGA

Protein sequence

MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEVNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDRKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP

Homology

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BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2)

HSP 1 Score: 416.4 bits (1069), Expect = 2.2e-115
Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV EF++LCDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEP LGINFARDGM +KDWLSLVAVHSDAWLLAVAF+FG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSS++S++  K      +K S    KD
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 ----EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
               E+EG+ EE E+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRAR 251
           KQYKCPSCSNKRAR
Sbjct: 241 KQYKCPSCSNKRAR 254

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BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.1e-109
Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 1


Query: 1   MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDV +F+Q CDPEK+NLCLYG PNE WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 120
           VNLPAEEVPPE+PEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFGSRFG D++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 180
           RKRLF+MIN++PT++EVVTG+ +KQ K+    +N + ++S++  K R  ES       AK
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180

Query: 181 DEDEGL--------NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPA 240
           DE+EGL         +E E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240

Query: 241 RAEHIKQYKCPSCSNKRARP 252
           RAEHIK YKCP+CSNKRARP
Sbjct: 241 RAEHIKHYKCPTCSNKRARP 260

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BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 7.7e-108
Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 1


Query: 1   MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 60
           M+GG A YNPRTVEEVF+DFKGRR  +++ALTTDV EFYQ CDPEKENLCLYGLPNE+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 120
           VNLPAEEVPPE+PEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFGSRF   K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 180
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N + +KS++  K R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240
           +EDE ++E+ E++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCPSCSNKRAR 251
           KCPSCSNKRAR
Sbjct: 241 KCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL6_ARATH (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.4e-101
Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+V+FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLP EEVPPE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WLL+VAFYFG+RFG  K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSES----SKLSNG 180
           KRLF MIN+LPTIFEVV+G+  KQ KD S+ +NNS SK  +G K R SES    +K+S+ 
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKP-SGVKSRQSESLSKVAKMSSP 180

Query: 181 LAKDEDEGLNE---EAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARA 240
             K+E+E  +E   E+E++    +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+A
Sbjct: 181 PPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKA 240

Query: 241 EHIKQYKCPSCSNKRARP 252
           EHIK YKCP+CSNKRARP
Sbjct: 241 EHIKHYKCPTCSNKRARP 256

[Close]

BLAST of Cp4.1LG11g11910 vs. Swiss-Prot
Match: ALFL8_ORYSJ (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.1e-101
Identity = 180/255 (70.59%), Postives = 207/255 (81.18%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG A+  RT E+VFRDF+ RRAGMI+ALTTDV +FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MDGGGAH--RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGM +KDWLSLVAVHSD WLLAVAFYFG+RFG DK  R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGR---DSESSKLSNGL 180
           KRLF+MIN+LPTI+EVVTG+ KKQ K+K+  ++  S+KS T P  +   +S   K+    
Sbjct: 121 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKMPPPK 180

Query: 181 AKDEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
            +D+  G  EE EE+H  TLCGACG+NY  DEFWICCD CE WFHGKCVKITPA+AEHIK
Sbjct: 181 DEDDSGGEEEEEEEDHENTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIK 240

Query: 241 QYKCPSC--SNKRAR 251
            YKCP+C  S+KRAR
Sbjct: 241 HYKCPNCSSSSKRAR 253

[Close]

BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: B9RK32_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1046170 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.3e-127
Identity = 219/251 (87.25%), Postives = 233/251 (92.83%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGGV YNPRTVEEVFRDFKGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNEQWEV
Sbjct: 1   MDGGVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFEVVTG+ KKQ K+KS VSN+SS+KS++  KGR SES K S    KD
Sbjct: 121 KRLFTMINDLPTIFEVVTGTAKKQAKEKSSVSNHSSNKSKSSSKGRGSESGKYSKAQPKD 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           EDEGL+EE EEEHG+TLCGACGENYA+DEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 251

[Close]

BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A067KCL5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07453 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.0e-126
Identity = 218/251 (86.85%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG  YNPRTVEEVFRDFKGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNEQWEV
Sbjct: 1   MDGGAQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFEVVTGSVKKQ KDKS VSN+SS+K+++  KGR ++S K S G  KD
Sbjct: 121 KRLFTMINDLPTIFEVVTGSVKKQAKDKS-VSNHSSNKTKSSSKGRGTDSGKFSKGQPKD 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           EDEGL+EE +EEHG+TLCGACGENYA+DEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EDEGLDEEEDEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 250

[Close]

BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A061GLQ4_THECC (ALF domain class transcription factor isoform 1 OS=Theobroma cacao GN=TCM_037580 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-123
Identity = 216/252 (85.71%), Postives = 232/252 (92.06%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG  YN RTVEEVFRDFKGRRAGMI+ALTTDV EFY+ CDPEKENLCLYG P+E WEV
Sbjct: 1   MDGGTQYNLRTVEEVFRDFKGRRAGMIKALTTDVGEFYEQCDPEKENLCLYGFPDEHWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGL-AK 180
           KRLFTMINDLPTIFE+VTGS KKQ K+KS VSN+SS+KS++  K R SES+K S  L AK
Sbjct: 121 KRLFTMINDLPTIFEIVTGSAKKQAKEKSSVSNHSSNKSKSSSKPRGSESAKYSKSLQAK 180

Query: 181 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240
           DE+EGL+EE EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 DEEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCPSCSNKRARP 252
           KCPSCSNKRARP
Sbjct: 241 KCPSCSNKRARP 252

[Close]

BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: I1LY29_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G107700 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-123
Identity = 213/251 (84.86%), Postives = 230/251 (91.63%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGGV YNPRTVEEVFRDFKGRRAGMI+ALTTDV EF+Q CDPEK+NLCLYG PNEQWEV
Sbjct: 1   MDGGVNYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFFQQCDPEKDNLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFE+VTGS KKQ K+KS +SN+SS+KS++G KGR SES K S     +
Sbjct: 121 KRLFTMINDLPTIFEIVTGSAKKQTKEKSSISNHSSNKSKSGSKGRGSESGKYSKQTKDE 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           E+E  +EE +EEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EEEVPDEEDDEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 251

[Close]

BLAST of Cp4.1LG11g11910 vs. TrEMBL
Match: A0A0B2PF47_GLYSO (PHD finger protein ALFIN-LIKE 5 OS=Glycine soja GN=glysoja_032469 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-123
Identity = 213/251 (84.86%), Postives = 230/251 (91.63%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGGV YNPRTVEEVFRDFKGRRAGMI+ALTTDV EF+Q CDPEK+NLCLYG PNEQWEV
Sbjct: 1   MDGGVNYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFFQQCDPEKDNLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFE+VTGS KKQ K+KS +SN+SS+KS++G KGR SES K S     +
Sbjct: 121 KRLFTMINDLPTIFEIVTGSAKKQTKEKSSISNHSSNKSKSGSKGRGSESGKYSKQTKDE 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           E+E  +EE +EEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EEEVPDEEDDEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 251

[Close]

BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 416.4 bits (1069), Expect = 1.3e-116
Identity = 198/254 (77.95%), Postives = 220/254 (86.61%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV EF++LCDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEP LGINFARDGM +KDWLSLVAVHSDAWLLAVAF+FG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLF M+NDLPTIFEVV G+ KKQGKDKS VSNNSS++S++  K      +K S    KD
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 ----EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
               E+EG+ EE E+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRAR 251
           KQYKCPSCSNKRAR
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5)

HSP 1 Score: 395.6 bits (1015), Expect = 2.3e-110
Identity = 186/260 (71.54%), Postives = 222/260 (85.38%), Query Frame = 1


Query: 1   MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDV +F+Q CDPEK+NLCLYG PNE WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 120
           VNLPAEEVPPE+PEPALGINFARDGMQ+++WLSLVAVHSDAWLL+V+FYFGSRFG D++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 180
           RKRLF+MIN++PT++EVVTG+ +KQ K+    +N + ++S++  K R  ES       AK
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180

Query: 181 DEDEGL--------NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPA 240
           DE+EGL         +E E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240

Query: 241 RAEHIKQYKCPSCSNKRARP 252
           RAEHIK YKCP+CSNKRARP
Sbjct: 241 RAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3)

HSP 1 Score: 391.3 bits (1004), Expect = 4.3e-109
Identity = 183/251 (72.91%), Postives = 213/251 (84.86%), Query Frame = 1


Query: 1   MDGGVA-YNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWE 60
           M+GG A YNPRTVEEVF+DFKGRR  +++ALTTDV EFYQ CDPEKENLCLYGLPNE+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSD 120
           VNLPAEEVPPE+PEPALGINFARDG+ +K+WLSLVA+HSDAWLL+V+FYFGSRF   K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAK 180
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N + +KS++  K R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240
           +EDE ++E+ E++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCPSCSNKRAR 251
           KCPSCSNKRAR
Sbjct: 241 KCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 370.5 bits (950), Expect = 7.9e-103
Identity = 181/258 (70.16%), Postives = 215/258 (83.33%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+V+FYQ CDPEKENLCLYGLPNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLP EEVPPE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WLL+VAFYFG+RFG  K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSES----SKLSNG 180
           KRLF MIN+LPTIFEVV+G+  KQ KD S+ +NNS SK  +G K R SES    +K+S+ 
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKP-SGVKSRQSESLSKVAKMSSP 180

Query: 181 LAKDEDEGLNE---EAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARA 240
             K+E+E  +E   E+E++    +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+A
Sbjct: 181 PPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKA 240

Query: 241 EHIKQYKCPSCSNKRARP 252
           EHIK YKCP+CSNKRARP
Sbjct: 241 EHIKHYKCPTCSNKRARP 256

[Close]

BLAST of Cp4.1LG11g11910 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 355.5 bits (911), Expect = 2.6e-98
Identity = 171/243 (70.37%), Postives = 203/243 (83.54%), Query Frame = 1


Query: 9   PRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEVNLPAEEVP 68
           PRTVEEVF DF+GRRAG+I+AL+TDV +FY  CDPEKENLCLYGLPNE WEVNLP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 69  PEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDRKRLFTMIN 128
           PE+PEPALGINFARDGMQ+KDW+SLVAVHSD+WL++VAFYFG+RFG  K++RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 129 DLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLA---KDEDEGL 188
           DLPTIFEVVTG+  KQ KD+S   N+S SKS +G K R SES   ++ ++   + EDE  
Sbjct: 129 DLPTIFEVVTGNA-KQSKDQSANHNSSRSKS-SGGKPRHSESHTKASKMSPPPRKEDESG 188

Query: 189 NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCS 248
           +E+ ++E G  +CGACG+NY  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCPSC+
Sbjct: 189 DEDEDDEQG-AVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCT 248

[Close]

BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|255546033|ref|XP_002514076.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ricinus communis])

HSP 1 Score: 463.0 bits (1190), Expect = 3.3e-127
Identity = 219/251 (87.25%), Postives = 233/251 (92.83%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGGV YNPRTVEEVFRDFKGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNEQWEV
Sbjct: 1   MDGGVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFEVVTG+ KKQ K+KS VSN+SS+KS++  KGR SES K S    KD
Sbjct: 121 KRLFTMINDLPTIFEVVTGTAKKQAKEKSSVSNHSSNKSKSSSKGRGSESGKYSKAQPKD 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           EDEGL+EE EEEHG+TLCGACGENYA+DEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 251

[Close]

BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|802628213|ref|XP_012077002.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas])

HSP 1 Score: 459.9 bits (1182), Expect = 2.8e-126
Identity = 218/251 (86.85%), Postives = 234/251 (93.23%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG  YNPRTVEEVFRDFKGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNEQWEV
Sbjct: 1   MDGGAQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFEVVTGSVKKQ KDKS VSN+SS+K+++  KGR ++S K S G  KD
Sbjct: 121 KRLFTMINDLPTIFEVVTGSVKKQAKDKS-VSNHSSNKTKSSSKGRGTDSGKFSKGQPKD 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           EDEGL+EE +EEHG+TLCGACGENYA+DEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EDEGLDEEEDEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 250

[Close]

BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|743905127|ref|XP_011045957.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Populus euphratica])

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-125
Identity = 214/251 (85.26%), Postives = 231/251 (92.03%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG  YNPRTVEEVFRD KGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNE WEV
Sbjct: 1   MDGGAQYNPRTVEEVFRDLKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEHWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFGSRFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGSRFGFDKTDR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLFTMINDLPTIFE+VTG+VKK+ K+KS +SN+SS+KS++  KGR SES K   G  KD
Sbjct: 121 KRLFTMINDLPTIFEIVTGAVKKEAKEKSSISNHSSNKSKSNSKGRGSESVKYLKGQPKD 180

Query: 181 EDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240
           E+EGL+EE EEEHG+TLCGACGENYA+DEFWICCDICEKWFHGKCVKITPARAEHIKQYK
Sbjct: 181 EEEGLDEEEEEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 240

Query: 241 CPSCSNKRARP 252
           CPSCSNKRARP
Sbjct: 241 CPSCSNKRARP 251

[Close]

BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|1009143505|ref|XP_015889300.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ziziphus jujuba])

HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123
Identity = 215/252 (85.32%), Postives = 232/252 (92.06%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG AYNPR++EEVFRDFKGRRAGMI+ALTTDV EFYQ CDPEKENLCLYG PNEQWEV
Sbjct: 1   MDGGSAYNPRSLEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG D++DR
Sbjct: 61  NLPAEEVPPEIPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDRADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180
           KRLF+MINDLPTIFEVVTGS KKQ K+KS VSN SS+KS++  KGR +ES K S  + KD
Sbjct: 121 KRLFSMINDLPTIFEVVTGSAKKQIKEKSSVSNQSSNKSKSSSKGRTAESGKYSKEVTKD 180

Query: 181 EDEGLN--EEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           EDEGL+  EE EEEHG+TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 EDEGLDEEEEEEEEHGDTLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRAR 251
           YKCPSCSNKRAR
Sbjct: 241 YKCPSCSNKRAR 252

[Close]

BLAST of Cp4.1LG11g11910 vs. NCBI nr
Match: gi|590575538|ref|XP_007012714.1| (ALF domain class transcription factor isoform 1 [Theobroma cacao])

HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123
Identity = 216/252 (85.71%), Postives = 232/252 (92.06%), Query Frame = 1


Query: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60
           MDGG  YN RTVEEVFRDFKGRRAGMI+ALTTDV EFY+ CDPEKENLCLYG P+E WEV
Sbjct: 1   MDGGTQYNLRTVEEVFRDFKGRRAGMIKALTTDVGEFYEQCDPEKENLCLYGFPDEHWEV 60

Query: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DK+DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGL-AK 180
           KRLFTMINDLPTIFE+VTGS KKQ K+KS VSN+SS+KS++  K R SES+K S  L AK
Sbjct: 121 KRLFTMINDLPTIFEIVTGSAKKQAKEKSSVSNHSSNKSKSSSKPRGSESAKYSKSLQAK 180

Query: 181 DEDEGLNEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240
           DE+EGL+EE EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 DEEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCPSCSNKRARP 252
           KCPSCSNKRARP
Sbjct: 241 KCPSCSNKRARP 252

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g11910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALFL4_ARATH	2.2e-115	77.95	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2	[more]
ALFL5_ARATH	4.1e-109	71.54	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1	[more]
ALFL3_ARATH	7.7e-108	72.91	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1	[more]
ALFL6_ARATH	1.4e-101	70.16	PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1	[more]
ALFL8_ORYSJ	4.1e-101	70.59	PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 ...	[more]

BLAST of Cp4.1LG11g11910 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RK32_RICCO	2.3e-127	87.25	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1046170 PE=4 SV=1	[more]
A0A067KCL5_JATCU	2.0e-126	86.85	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07453 PE=4 SV=1	[more]
A0A061GLQ4_THECC	1.2e-123	85.71	ALF domain class transcription factor isoform 1 OS=Theobroma cacao GN=TCM_037580...	[more]
I1LY29_SOYBN	1.6e-123	84.86	Uncharacterized protein OS=Glycine max GN=GLYMA_13G107700 PE=4 SV=1	[more]
A0A0B2PF47_GLYSO	1.6e-123	84.86	PHD finger protein ALFIN-LIKE 5 OS=Glycine soja GN=glysoja_032469 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g11910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26210.1	1.3e-116	77.95	alfin-like 4	[more]
AT5G20510.1	2.3e-110	71.54	alfin-like 5	[more]
AT3G42790.1	4.3e-109	72.91	alfin-like 3	[more]
AT2G02470.1	7.9e-103	70.16	alfin-like 6	[more]
AT1G14510.1	2.6e-98	70.37	alfin-like 7	[more]

BLAST of Cp4.1LG11g11910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255546033\|ref\|XP_002514076.1\|	3.3e-127	87.25	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ricinus communis]	[more]
gi\|802628213\|ref\|XP_012077002.1\|	2.8e-126	86.85	PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Jatropha curcas]	[more]
gi\|743905127\|ref\|XP_011045957.1\|	4.1e-125	85.26	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Populus euphratica]	[more]
gi\|1009143505\|ref\|XP_015889300.1\|	1.7e-123	85.32	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Ziziphus jujuba]	[more]
gi\|590575538\|ref\|XP_007012714.1\|	1.7e-123	85.71	ALF domain class transcription factor isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0042393	histone binding
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR021998	Alfin
IPR019787	Znf_PHD-finger
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR011011	Znf_FYVE_PHD
IPR001965	Znf_PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0035064	methylated histone binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0042393	histone binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g11910.1	Cp4.1LG11g11910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 197..245 score: 2.
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 188..248 score: 2.44
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 190..248 score: 2.2
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 198..244 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 198..246 score: 1.4
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 195..247 score: 9
IPR021998	Alfin	PFAM	PF12165	DUF3594	coord: 11..138 score: 1.0
None	No IPR available	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 1..251 score: 2.8E
None	No IPR available	PANTHER	PTHR12321:SF55	PHD FINGER PROTEIN ALFIN-LIKE 4	coord: 1..251 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g11910	CmaCh12G013180	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g11910	CmoCh05G014130	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g11910	CmoCh12G013490	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g11910	Cla011179	Watermelon (97103) v1	cpewmB102
Cp4.1LG11g11910	Cla016848	Watermelon (97103) v1	cpewmB124
Cp4.1LG11g11910	ClCG03G015290	Watermelon (Charleston Gray)	cpewcgB107
Cp4.1LG11g11910	ClCG11G001590	Watermelon (Charleston Gray)	cpewcgB094
Cp4.1LG11g11910	Lsi11G001710	Bottle gourd (USVL1VR-Ls)	cpelsiB072
Cp4.1LG11g11910	Bhi06G001395	Wax gourd	cpewgoB0121
Cp4.1LG11g11910	Carg10786	Silver-seed gourd	carcpeB0809
Cp4.1LG11g11910	Carg18641	Silver-seed gourd	carcpeB1244

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g11910	Cp4.1LG07g10730	Cucurbita pepo (Zucchini)	cpecpeB140

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g11910	Cucurbita pepo (Zucchini)	cpecpeB113
Cp4.1LG11g11910	Cucurbita pepo (Zucchini)	cpecpeB122
Cp4.1LG11g11910	Cucurbita pepo (Zucchini)	cpecpeB128
Cp4.1LG11g11910	Cucurbita pepo (Zucchini)	cpecpeB132
Cp4.1LG11g11910	Cucumber (Gy14) v1	cgycpeB0273
Cp4.1LG11g11910	Cucurbita maxima (Rimu)	cmacpeB075
Cp4.1LG11g11910	Cucurbita maxima (Rimu)	cmacpeB107
Cp4.1LG11g11910	Cucurbita maxima (Rimu)	cmacpeB178
Cp4.1LG11g11910	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g11910	Cucurbita moschata (Rifu)	cmocpeB048
Cp4.1LG11g11910	Cucurbita moschata (Rifu)	cmocpeB084
Cp4.1LG11g11910	Cucurbita moschata (Rifu)	cmocpeB424
Cp4.1LG11g11910	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g11910	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g11910	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g11910	Bottle gourd (USVL1VR-Ls)	cpelsiB093
Cp4.1LG11g11910	Watermelon (Charleston Gray)	cpewcgB097
Cp4.1LG11g11910	Watermelon (97103) v1	cpewmB116
Cp4.1LG11g11910	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g11910	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g11910	Melon (DHL92) v3.6.1	cpemedB126
Cp4.1LG11g11910	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g11910	Silver-seed gourd	carcpeB0135
Cp4.1LG11g11910	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g11910	Wax gourd	cpewgoB0123
Cp4.1LG11g11910	Wax gourd	cpewgoB0120
Cp4.1LG11g11910	Wax gourd	cpewgoB0168