Cp4.1LG11g10030 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG11g10030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionS-RNase
LocationCp4.1LG11 : 8442854 .. 8443996 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTAGGATGATATTTTGTGTGCACAATTTAAAACCATTTTTAGAGTTTTGGTAGGAAAATTTTTGGTACAAATTACCATAGGTGTGCCAAAATTATTAAAAAAAAAAAAATGTATATTTGATAGTATAAATATCGACAGAGGATTCTCGAACACAAATTTCTTCTTCTTCTTTTGATATTCACACACAAAAAAAAATGTCTATGATTATGTTGTTGTTGCTGTTCAACTTGATGCTAACCGCAAGCTATGAGTTCGAATACTTTCAAATGGTCCAACAATGGCCACCAACTTTTTGCAGCGGGATTGGTGTTACTTGTAAAGTTCAACCACCTCAAAACAAGTTTACTATTCATGGGTTATGGCCAAGCAACTTCTCGAATGCAAAGCTCATCTGTTCGGGAGGAGATTTACAACAAAATAAGGTTTTTATCCTCTTTAATATATATATTTTTTTCATAATTAGTTCAAATATTCGTGAAAAATAATGGTAGTTTAAAAATGTAGCTTCCTCATCGACTTTCAACCAAACTTAAAAAATATTGGCCAAACTTGAAATGTGGTAATGACTTCGATTTTTGGAGATACGAATGGAGAAAACATGGTAGGTGTTCAAATCCCCCACTCAACCCTAATCAATATTTACATACAACTATACGCATGTACTTGAATTATGATCTCCTGGGCATGTTGAATGCGGCTGGACTCAGTCCGAGCACAACGTTCCGTCAATATACTTACATGGAAAACGTACTTAAGAATGCAATAGGAGCGGTCCCAAGCCTTCGTTGCAATGTCAACAGCCAATCAAATGAGGACCAATTGTATGAAATTGTTATTTGTTTCGAAGAAAATAGTACAAATTTGATAGATTGTACATATGCCCCAGGAAATTGTCCAGATTGGTTTGTTTGGTAGGATTTATAGGATTTAGGTTTCTACTGCTTTTGTTTGTCGCTCATTGTAAGATTCTATCATTATAATGGAATCAAAACTACTTTATATTATGATATGGATGGATTGGATTATCCACTTTGAAATCCCCAGAATTCGCATCGTACCCAAATTCGATGGCGCTCATCATCAAATCGTAACCATCTGGATGGAGAGAGGTAATAGTGATGGTACAAACCGGAAAAACGGA

mRNA sequence

TGGTAGGATGATATTTTGTGTGCACAATTTAAAACCATTTTTAGAGTTTTGGTAGGAAAATTTTTGGTACAAATTACCATAGGTGTGCCAAAATTATTAAAAAAAAAAAAATGTATATTTGATAGTATAAATATCGACAGAGGATTCTCGAACACAAATTTCTTCTTCTTCTTTTGATATTCACACACAAAAAAAAATGTCTATGATTATGTTGTTGTTGCTGTTCAACTTGATGCTAACCGCAAGCTATGAGTTCGAATACTTTCAAATGGTCCAACAATGGCCACCAACTTTTTGCAGCGGGATTGGTGTTACTTGTAAAGTTCAACCACCTCAAAACAAGTTTACTATTCATGGGTTATGGCCAAGCAACTTCTCGAATGCAAAGCTCATCTGTTCGGGAGGAGATTTACAACAAAATAAGCTTCCTCATCGACTTTCAACCAAACTTAAAAAATATTGGCCAAACTTGAAATGTGGTAATGACTTCGATTTTTGGAGATACGAATGGAGAAAACATGGTAGGTGTTCAAATCCCCCACTCAACCCTAATCAATATTTACATACAACTATACGCATGTACTTGAATTATGATCTCCTGGGCATGTTGAATGCGGCTGGACTCAGTCCGAGCACAACGTTCCGTCAATATACTTACATGGAAAACGTACTTAAGAATGCAATAGGAGCGGTCCCAAGCCTTCGTTGCAATGTCAACAGCCAATCAAATGAGGACCAATTGTATGAAATTGTTATTTGTTTCGAAGAAAATAGTACAAATTTGATAGATTGTACATATGCCCCAGGAAATTGTCCAGATTGGTTTGTTTGGTAGGATTTATAGGATTTAGGTTTCTACTGCTTTTGTTTGTCGCTCATTGTAAGATTCTATCATTATAATGGAATCAAAACTACTTTATATTATGATATGGATGGATTGGATTATCCACTTTGAAATCCCCAGAATTCGCATCGTACCCAAATTCGATGGCGCTCATCATCAAATCGTAACCATCTGGATGGAGAGAGGTAATAGTGATGGTACAAACCGGAAAAACGGA

Coding sequence (CDS)

ATGTCTATGATTATGTTGTTGTTGCTGTTCAACTTGATGCTAACCGCAAGCTATGAGTTCGAATACTTTCAAATGGTCCAACAATGGCCACCAACTTTTTGCAGCGGGATTGGTGTTACTTGTAAAGTTCAACCACCTCAAAACAAGTTTACTATTCATGGGTTATGGCCAAGCAACTTCTCGAATGCAAAGCTCATCTGTTCGGGAGGAGATTTACAACAAAATAAGCTTCCTCATCGACTTTCAACCAAACTTAAAAAATATTGGCCAAACTTGAAATGTGGTAATGACTTCGATTTTTGGAGATACGAATGGAGAAAACATGGTAGGTGTTCAAATCCCCCACTCAACCCTAATCAATATTTACATACAACTATACGCATGTACTTGAATTATGATCTCCTGGGCATGTTGAATGCGGCTGGACTCAGTCCGAGCACAACGTTCCGTCAATATACTTACATGGAAAACGTACTTAAGAATGCAATAGGAGCGGTCCCAAGCCTTCGTTGCAATGTCAACAGCCAATCAAATGAGGACCAATTGTATGAAATTGTTATTTGTTTCGAAGAAAATAGTACAAATTTGATAGATTGTACATATGCCCCAGGAAATTGTCCAGATTGGTTTGTTTGGTAG

Protein sequence

MSMIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSNAKLICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNVNSQSNEDQLYEIVICFEENSTNLIDCTYAPGNCPDWFVW
BLAST of Cp4.1LG11g10030 vs. Swiss-Prot
Match: RNMC_MOMCH (Ribonuclease MC OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 63/182 (34.62%), Postives = 85/182 (46.70%), Query Frame = 1

Query: 20  FEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSNAKLIC-SGGDLQQNKLP 79
           F+ F  VQQWPP  CS              FTIHGLWP     +   C  G      K+ 
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 80  HRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQYLHTTIRMYLNYDLLGML 139
           H L ++L   WPN+   N+  FW +EW KHG CS    N   Y    + M  NYD++G L
Sbjct: 61  H-LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGAL 120

Query: 140 NAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNVNSQSNEDQLYEIVICFEENSTNLID 199
                 P+   +    ++  LK   G  P LRC  + Q+    L ++V CF ++ + LID
Sbjct: 121 RPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLID 180

Query: 200 CT 201
           CT
Sbjct: 181 CT 181

BLAST of Cp4.1LG11g10030 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.8e-26
Identity = 68/216 (31.48%), Postives = 107/216 (49.54%), Query Frame = 1

Query: 1   MSMIMLLLLFNLMLTASY---EFEYFQMVQQWPPTFCSGIGVTCKVQP--PQNKFTIHGL 60
           + +I LL++   + +AS    +F++F  VQQWP ++C      C      P   F IHGL
Sbjct: 8   LCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGL 67

Query: 61  WPSNFSNAKLI--CSGGDLQQNKLPHRLSTKLKKYWPNLKC--GNDFDFWRYEWRKHGRC 120
           WP N+ +      C       +     L T +KK WP L C  G+   FW +EW KHG C
Sbjct: 68  WP-NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTC 127

Query: 121 SNPPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRC 180
           S   ++ ++Y  T + +    +LLG L  AG++P         + + +K +IG  P + C
Sbjct: 128 SESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVEC 187

Query: 181 NVNSQSNEDQLYEIVICFEENSTNLIDCTYAP-GNC 207
           N +   N  QLY++ +C + + + LI+C   P G C
Sbjct: 188 NRDGSGN-SQLYQVYLCVDRSGSGLIECPVFPHGKC 221

BLAST of Cp4.1LG11g10030 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 67/213 (31.46%), Postives = 110/213 (51.64%), Query Frame = 1

Query: 4   IMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTC--KVQPPQNKFTIHGLWPSNFS 63
           I+++    ++   S +F++F  VQQWP ++C      C      P   F+IHGLWP N+ 
Sbjct: 12  IIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWP-NYK 71

Query: 64  NAKLICS---GGDLQQNKLPHRLSTKLKKYWPNLKC--GNDFDFWRYEWRKHGRCSNPPL 123
           + K   +      L +++    +ST ++K WP+L C   +   FW +EW KHG CS   L
Sbjct: 72  DGKWPQNCDRESSLDESEFSDLIST-MEKNWPSLACPSSDGLKFWSHEWLKHGTCS--AL 131

Query: 124 NPNQYLHTTIRMYLNYDLLGMLNAAGLSP-STTFRQYTYMENVLKNAIGAVPSLRCNVNS 183
           N + Y  T +      +LL  LN AG+ P +  +     ++  ++  +G  P + CNV+S
Sbjct: 132 NQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDS 191

Query: 184 QSNEDQLYEIVICFEENSTNLIDCTYAP--GNC 207
           Q N  QLY++ +C + +++  IDC   P  G C
Sbjct: 192 QGNH-QLYQVYLCVDSSASKFIDCPIFPHGGKC 219

BLAST of Cp4.1LG11g10030 vs. Swiss-Prot
Match: RNS3_ARATH (Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.3e-25
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 1

Query: 1   MSMIMLLLLFNLMLTASY--EFEYFQMVQQWPPTFCSGIGVTCKVQP--PQNKFTIHGLW 60
           M   + +L    +   S+  +F++F  V QWP  +C      C  Q   P   F IHGLW
Sbjct: 1   MKFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLW 60

Query: 61  PSNFSNA-KLICSGGDLQQNKLPHRLSTKLKKYWPNLKC-GND-FDFWRYEWRKHGRCSN 120
           P+  +      C+      +     L + L++ WP L C  ND   FW +EW KHG C+ 
Sbjct: 61  PNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAE 120

Query: 121 PPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNV 180
             L+ + Y    +++    +LL  L  AG+ P   F +   +EN +K  +G  P + CN 
Sbjct: 121 SELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 181 NSQSNEDQLYEIVICFEENSTNLIDCTYAP-GNC 207
           +S S+  QLY+I +C + +++  I+C   P G C
Sbjct: 181 DS-SHNSQLYQIYLCVDTSASKFINCPVMPHGRC 213

BLAST of Cp4.1LG11g10030 vs. Swiss-Prot
Match: RN28_PANGI (Ribonuclease-like storage protein OS=Panax ginseng PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 4.9e-23
Identity = 56/186 (30.11%), Postives = 91/186 (48.92%), Query Frame = 1

Query: 16  ASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSNAK-LICSGGDLQQ 75
           + Y +  F +  QWP  FC  +   C  +   N FTIHGL+P N      L C G     
Sbjct: 25  SDYPWAMFALRLQWPAGFCE-VNNACDTKSLLNTFTIHGLYPYNAKGTPALYCDGTAFDV 84

Query: 76  NKLPHRLSTKLKKYWPNLKCGN-DFDFWRYEWRKHGRCSNPPLNPNQYLHTTIRMYLNYD 135
           N +   L+ ++   WP+ +    D  FW +EW+KHGRCS   L    Y  T +     +D
Sbjct: 85  NSVSDFLA-EMHLAWPSHETNTEDIQFWEHEWKKHGRCSEALLKQTDYFRTALAFRKAFD 144

Query: 136 LLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNVNSQSNEDQLYEIVICFEENS 195
           ++G+LN  G+ P+    +   ++  +K  + AVP +    N +++E  L +I +C  + +
Sbjct: 145 IVGLLNQEGIYPNNDLYRPKMIKEAIKKHLNAVPEIDFTKN-ENSEYVLTDINVCVNQQA 204

Query: 196 TNLIDC 200
           T  +DC
Sbjct: 205 TRFVDC 207

BLAST of Cp4.1LG11g10030 vs. TrEMBL
Match: A0A0A0LDS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.0e-40
Identity = 91/207 (43.96%), Postives = 126/207 (60.87%), Query Frame = 1

Query: 2   SMIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFS 61
           + + LL+L  L      ++++FQMVQQW P  CS   V C V P +  FTIHGLWPSNF+
Sbjct: 4   NQVFLLVLLGLWCVDG-QYQFFQMVQQWGPAKCSSGRVKCHVTP-KPMFTIHGLWPSNFT 63

Query: 62  NAKL-ICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQ 121
           +  L  CS      +++   L ++L KYWP++  G D DFW++EW KHG CSNPP N  Q
Sbjct: 64  DLMLHYCSLQSFDASQIK-TLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFNIFQ 123

Query: 122 Y--LHTTIRMYLNYDLLGMLNAAGLSPSTT-FRQYTYMENVLKNAIGAVPSLRCN-VNSQ 181
           Y  L   IR Y  YDL+ +LN AGL PST+   QY  + ++++ A+ A P L+CN  N Q
Sbjct: 124 YFELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDKNGQ 183

Query: 182 SNEDQLYEIVICFEENSTNLIDCTYAP 204
              +QL+E+++CF+    N IDC   P
Sbjct: 184 GQNNQLWEVILCFDHGGVNPIDCPAQP 207

BLAST of Cp4.1LG11g10030 vs. TrEMBL
Match: A0A0A0LAN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.4e-38
Identity = 85/215 (39.53%), Postives = 123/215 (57.21%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCS-GIGVTCKVQPPQNKFTIHGLWPSNFS 62
           +I+  L   + +     FE+FQ V+QW P  C+ G  V+    PPQ KFTIHGLWPSN S
Sbjct: 6   LIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSNHS 65

Query: 63  NAKLICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQY 122
           NA L+C    +    +   L  +L   WP+LK GN+  FW +EW  HG+CS+PP +  QY
Sbjct: 66  NAHLLCQSKTIYSKVIS--LEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQY 125

Query: 123 LHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENV---LKNAIGAVPSLRCNVNSQSN 182
              ++ +   +DLL +L AAGL+P T+  Q   ++N+   ++      P +RCN N ++ 
Sbjct: 126 FQISLNLLRKFDLLTILKAAGLNPQTS--QNLAIQNIMAPIQRTTKKYPGIRCNKNVKTG 185

Query: 183 EDQLYEIVICFEENSTNLIDC-TYAPGNCPDWFVW 213
           + QL EIV+C E++   LIDC T+    C   FVW
Sbjct: 186 KSQLNEIVLCLEKDGATLIDCPTFVSNTCAKSFVW 216

BLAST of Cp4.1LG11g10030 vs. TrEMBL
Match: A0A0A0LAB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-37
Identity = 93/220 (42.27%), Postives = 123/220 (55.91%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSN 62
           + +L LL +L+      F++FQ+VQQW P  CS  G  C  QP Q  FTIHGLWPSNFS 
Sbjct: 5   IFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQP-QPMFTIHGLWPSNFST 64

Query: 63  AKLICSGGD--LQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQ 122
             ++C        Q K+   L   L KYWP++  G + +FW +EWRKH  C +PP     
Sbjct: 65  VPILCPRTKKLFPQGKVTS-LEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTIFW 124

Query: 123 YLHTTIRMYLN--YDLLGMLNAAGLSPSTTFRQYTYMENVL---KNAIGAVPSLRCNVNS 182
           Y   ++R  +N  YDLL +LN AGLS  T   +    +NVL   KNA G  P +RCN+N 
Sbjct: 125 YFDISLRHRMNKTYDLLTILNDAGLSHQT--HKDLISQNVLDPIKNATGMEPGIRCNING 184

Query: 183 QSNEDQLYEIVICFEENSTNLIDC-TYAPGNCPDW--FVW 213
            + + QL EIV+CF  + T LIDC ++    C     FVW
Sbjct: 185 ITKKLQLKEIVLCFGNDGTTLIDCPSFVSNTCTSQPKFVW 220

BLAST of Cp4.1LG11g10030 vs. TrEMBL
Match: B5KLN0_9ROSA (S34-RNase OS=Prunus cerasus PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.1e-37
Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCS-GIGVTCKVQPPQNKFTIHGLWPSNFS 62
           +++    F   + +S  +EYFQ VQQWPPT C   I   C    P   FTIHGLWPSN+S
Sbjct: 11  LVLAFAFFFCYVMSSGSYEYFQFVQQWPPTNCRVRIKRPCSKPRPLQNFTIHGLWPSNYS 70

Query: 63  NAKLI--CSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPN 122
           N      C+G   +  K+  +L +KLK+ WP+++ GND  FW  EW KHGRCS   LN  
Sbjct: 71  NPTKPSNCNGSKYEDRKVYPKLRSKLKRSWPDVESGNDTRFWEGEWNKHGRCSEQTLNQM 130

Query: 123 QYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENV--LKNAIGAVPSLRCNVNSQS 182
           QY   +  M+L+Y++  +L  A + P  T R +TY + V  +K A    P LRC  ++ +
Sbjct: 131 QYFEVSHDMWLSYNITEILRNASIVPHPT-RTWTYSDIVSPIKAATKRTPLLRCKTDTAT 190

Query: 183 NEDQLYEIVICFEENSTNLIDCTYAPG 205
           N + L+E+V C+  N+   IDC   PG
Sbjct: 191 NTELLHEVVFCYGYNALKQIDCNRTPG 216

BLAST of Cp4.1LG11g10030 vs. TrEMBL
Match: A0FGT1_9ROSA (S-RNase OS=Prunus webbii GN=S1 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.1e-36
Identity = 82/210 (39.05%), Postives = 114/210 (54.29%), Query Frame = 1

Query: 12  LMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSNAKLI--CSG 71
           +M T    ++YFQ VQQWPPT C      C    P   FTIHGLWPSN+SN  +   C+G
Sbjct: 21  IMSTGDGSYDYFQFVQQWPPTNCRVRNKPCSKPRPLQIFTIHGLWPSNYSNPTMPSNCNG 80

Query: 72  GDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQYLHTTIRMY 131
              +  K+  RL +KLK  WP+++ GND +FW  EW KHG CS+  LN  QY   +  M+
Sbjct: 81  SQFEAKKVYPRLQSKLKISWPDVESGNDTNFWEREWNKHGTCSSRILNQMQYFERSYEMW 140

Query: 132 LNYDLLGMLNAAGLSPSTTFRQYTYMENV--LKNAIGAVPSLRCNVN------------- 191
            +Y++  +L  A + PS T + +TY + V  +K      P LRC  +             
Sbjct: 141 RSYNITNILKNASIVPSAT-QTWTYSDIVSPIKAVTQRTPLLRCKSHPTKPKGQAKSQPT 200

Query: 192 SQSNEDQLYEIVICFEENSTNLIDCTYAPG 205
           SQ+N   L+E+V+CF+ N+  LIDC    G
Sbjct: 201 SQANSQFLHEVVLCFDYNALILIDCNRTAG 229

BLAST of Cp4.1LG11g10030 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 66/215 (30.70%), Postives = 109/215 (50.70%), Query Frame = 1

Query: 1   MSMIMLLLLFNLMLTA--SYEFEYFQMVQQWPPTFCSGIGVTCKVQP--PQNKFTIHGLW 60
           +++++ LL+F  +  +    +F++F  V QWP  +C      C      P   F IHGLW
Sbjct: 7   VNVLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLW 66

Query: 61  PS-NFSNAKLICSGGDLQQNKLPHRLSTKLKKYWPNLKCGND--FDFWRYEWRKHGRCSN 120
           P+ N  +    C             L + LKK WP L C ++  F+FW +EW KHG CS 
Sbjct: 67  PNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSE 126

Query: 121 PPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNV 180
             ++ ++Y    +++    +LL +L  +G++P   F     + N +K+ IG  P + CN 
Sbjct: 127 SVMDQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNK 186

Query: 181 NSQSNEDQLYEIVICFEENSTNLIDCTYAP-GNCP 208
           + + N  QL++I IC + + T  I+C   P G+CP
Sbjct: 187 DPERNA-QLHQIYICVDTSGTEFIECPVLPRGSCP 220

BLAST of Cp4.1LG11g10030 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27
Identity = 68/216 (31.48%), Postives = 107/216 (49.54%), Query Frame = 1

Query: 1   MSMIMLLLLFNLMLTASY---EFEYFQMVQQWPPTFCSGIGVTCKVQP--PQNKFTIHGL 60
           + +I LL++   + +AS    +F++F  VQQWP ++C      C      P   F IHGL
Sbjct: 8   LCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGL 67

Query: 61  WPSNFSNAKLI--CSGGDLQQNKLPHRLSTKLKKYWPNLKC--GNDFDFWRYEWRKHGRC 120
           WP N+ +      C       +     L T +KK WP L C  G+   FW +EW KHG C
Sbjct: 68  WP-NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTC 127

Query: 121 SNPPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRC 180
           S   ++ ++Y  T + +    +LLG L  AG++P         + + +K +IG  P + C
Sbjct: 128 SESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVEC 187

Query: 181 NVNSQSNEDQLYEIVICFEENSTNLIDCTYAP-GNC 207
           N +   N  QLY++ +C + + + LI+C   P G C
Sbjct: 188 NRDGSGN-SQLYQVYLCVDRSGSGLIECPVFPHGKC 221

BLAST of Cp4.1LG11g10030 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-26
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 1

Query: 1   MSMIMLLLLFNLMLTASY--EFEYFQMVQQWPPTFCSGIGVTCKVQP--PQNKFTIHGLW 60
           M   + +L    +   S+  +F++F  V QWP  +C      C  Q   P   F IHGLW
Sbjct: 1   MKFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLW 60

Query: 61  PSNFSNA-KLICSGGDLQQNKLPHRLSTKLKKYWPNLKC-GND-FDFWRYEWRKHGRCSN 120
           P+  +      C+      +     L + L++ WP L C  ND   FW +EW KHG C+ 
Sbjct: 61  PNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAE 120

Query: 121 PPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSLRCNV 180
             L+ + Y    +++    +LL  L  AG+ P   F +   +EN +K  +G  P + CN 
Sbjct: 121 SELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 181 NSQSNEDQLYEIVICFEENSTNLIDCTYAP-GNC 207
           +S S+  QLY+I +C + +++  I+C   P G C
Sbjct: 181 DS-SHNSQLYQIYLCVDTSASKFINCPVMPHGRC 213

BLAST of Cp4.1LG11g10030 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 101.7 bits (252), Expect = 5.8e-22
Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = 1

Query: 19  EFEYFQMVQQWPPTFCSGI------GVTCKVQPPQNKFTIHGLWPSNFSNAKLICSGGDL 78
           EF+YF +  QWP T+C G          C+      +FTIHGLWP     +   C     
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSD 90

Query: 79  QQNKLPHRLSTKLKKYWPNLKCGNDF-------DFWRYEWRKHGRCSNPPLNPN-QYLHT 138
            + K    L   L+KYWP+L CG+          FW +EW KHG CS+P  +    Y  T
Sbjct: 91  FKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLT 150

Query: 139 TIRMYLNYDLLGMLNAAGLSPSTTFRQYTY--MENVLKNAIGAVPSLRCNVNSQSNEDQL 190
           T+ +YL +++  +L  AG   S +  +Y    +   ++NA    P + C        D +
Sbjct: 151 TLNLYLKHNVTDVLYQAGYVASNS-EKYPLGGIVTAIQNAFHITPEVVC------KRDAI 210

BLAST of Cp4.1LG11g10030 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 60/214 (28.04%), Postives = 98/214 (45.79%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASY---EFEYFQMVQQWPPTFCSGIGVTCKVQPPQ-----NKFTIHG 62
           ++ LL+L +L++++S    +F +F  V  WP   C      C   PP      + F IHG
Sbjct: 6   IVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCC---PPTKGNTASDFIIHG 65

Query: 63  LWPS-NFSNAKLICSGGDLQQNKLPHRLSTKLKKYWPNLKC----GNDFDFWRYEWRKHG 122
           LWP  N       C   +L        L  +++K W          N+ + W +EW KHG
Sbjct: 66  LWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHG 125

Query: 123 RCSNPPLNPNQYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENVLKNAIGAVPSL 182
            C     + + Y  T ++      LL +L   G+ P+  F     ++N +K AIG  P +
Sbjct: 126 TCVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGI 185

Query: 183 RCNVNSQSNEDQLYEIVICFEENSTNLIDCTYAP 204
            CN + + N+ QL++I IC +  +   ++C Y P
Sbjct: 186 ECNEDVKGNK-QLFQIYICLDNYAKEFVECPYVP 215

BLAST of Cp4.1LG11g10030 vs. NCBI nr
Match: gi|700203881|gb|KGN59014.1| (hypothetical protein Csa_3G743990 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 5.8e-40
Identity = 91/207 (43.96%), Postives = 126/207 (60.87%), Query Frame = 1

Query: 2   SMIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFS 61
           + + LL+L  L      ++++FQMVQQW P  CS   V C V P +  FTIHGLWPSNF+
Sbjct: 4   NQVFLLVLLGLWCVDG-QYQFFQMVQQWGPAKCSSGRVKCHVTP-KPMFTIHGLWPSNFT 63

Query: 62  NAKL-ICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQ 121
           +  L  CS      +++   L ++L KYWP++  G D DFW++EW KHG CSNPP N  Q
Sbjct: 64  DLMLHYCSLQSFDASQIK-TLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFNIFQ 123

Query: 122 Y--LHTTIRMYLNYDLLGMLNAAGLSPSTT-FRQYTYMENVLKNAIGAVPSLRCN-VNSQ 181
           Y  L   IR Y  YDL+ +LN AGL PST+   QY  + ++++ A+ A P L+CN  N Q
Sbjct: 124 YFELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDKNGQ 183

Query: 182 SNEDQLYEIVICFEENSTNLIDCTYAP 204
              +QL+E+++CF+    N IDC   P
Sbjct: 184 GQNNQLWEVILCFDHGGVNPIDCPAQP 207

BLAST of Cp4.1LG11g10030 vs. NCBI nr
Match: gi|700203887|gb|KGN59020.1| (hypothetical protein Csa_3G745530 [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 85/215 (39.53%), Postives = 123/215 (57.21%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCS-GIGVTCKVQPPQNKFTIHGLWPSNFS 62
           +I+  L   + +     FE+FQ V+QW P  C+ G  V+    PPQ KFTIHGLWPSN S
Sbjct: 6   LIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSNHS 65

Query: 63  NAKLICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQY 122
           NA L+C    +    +   L  +L   WP+LK GN+  FW +EW  HG+CS+PP +  QY
Sbjct: 66  NAHLLCQSKTIYSKVIS--LEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSLFQY 125

Query: 123 LHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENV---LKNAIGAVPSLRCNVNSQSN 182
              ++ +   +DLL +L AAGL+P T+  Q   ++N+   ++      P +RCN N ++ 
Sbjct: 126 FQISLNLLRKFDLLTILKAAGLNPQTS--QNLAIQNIMAPIQRTTKKYPGIRCNKNVKTG 185

Query: 183 EDQLYEIVICFEENSTNLIDC-TYAPGNCPDWFVW 213
           + QL EIV+C E++   LIDC T+    C   FVW
Sbjct: 186 KSQLNEIVLCLEKDGATLIDCPTFVSNTCAKSFVW 216

BLAST of Cp4.1LG11g10030 vs. NCBI nr
Match: gi|778683692|ref|XP_011651927.1| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 3.5e-37
Identity = 93/220 (42.27%), Postives = 123/220 (55.91%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSN 62
           + +L LL +L+      F++FQ+VQQW P  CS  G  C  QP Q  FTIHGLWPSNFS 
Sbjct: 5   IFILCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQP-QPMFTIHGLWPSNFST 64

Query: 63  AKLICSGGD--LQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQ 122
             ++C        Q K+   L   L KYWP++  G + +FW +EWRKH  C +PP     
Sbjct: 65  VPILCPRTKKLFPQGKVTS-LEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTIFW 124

Query: 123 YLHTTIRMYLN--YDLLGMLNAAGLSPSTTFRQYTYMENVL---KNAIGAVPSLRCNVNS 182
           Y   ++R  +N  YDLL +LN AGLS  T   +    +NVL   KNA G  P +RCN+N 
Sbjct: 125 YFDISLRHRMNKTYDLLTILNDAGLSHQT--HKDLISQNVLDPIKNATGMEPGIRCNING 184

Query: 183 QSNEDQLYEIVICFEENSTNLIDC-TYAPGNCPDW--FVW 213
            + + QL EIV+CF  + T LIDC ++    C     FVW
Sbjct: 185 ITKKLQLKEIVLCFGNDGTTLIDCPSFVSNTCTSQPKFVW 220

BLAST of Cp4.1LG11g10030 vs. NCBI nr
Match: gi|659085730|ref|XP_008443571.1| (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 6.0e-37
Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 1

Query: 5   MLLLLFNLMLTASYEFEYFQMVQQWPPTFCSGIGVTCKVQPPQNKFTIHGLWPSNFSNAK 64
           +L LL  L+    Y F++FQ+V+QW P  C+  G  C  QP Q +FTIHGLWPSNFSNA+
Sbjct: 7   ILCLLSLLLFVNGYPFDFFQLVEQWGPNTCND-GTQCHAQP-QPEFTIHGLWPSNFSNAR 66

Query: 65  LICSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQYLHT 124
           L C+   L  N     L   L +YWP++  GN+  FW  EW+KHG C +PP N  QY   
Sbjct: 67  LFCATRKLFDNGQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNITQYFQL 126

Query: 125 TIRMYLNYDLLGMLNAA----------GLSPSTTFRQYTYMENVLKNAIGAVPSLRCNVN 184
           ++  +  YDLL +LN            GL+P           N + NA      +RCN N
Sbjct: 127 SLDHHRTYDLLKILNGVWHRNRQMPNNGLAPKDIL-------NPIFNATNKTAGIRCNKN 186

Query: 185 SQSNEDQLYEIVICFEENSTNLIDC-TYAPGNC-PDWFVW 213
             + + QL+EIV+CF+ N T LIDC  +   +C    FVW
Sbjct: 187 GITKKLQLHEIVLCFDNNGTTLIDCPKFVSNSCNQPKFVW 217

BLAST of Cp4.1LG11g10030 vs. NCBI nr
Match: gi|158563776|gb|ABW74347.1| (S34-RNase [Prunus cerasus])

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36
Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 1

Query: 3   MIMLLLLFNLMLTASYEFEYFQMVQQWPPTFCS-GIGVTCKVQPPQNKFTIHGLWPSNFS 62
           +++    F   + +S  +EYFQ VQQWPPT C   I   C    P   FTIHGLWPSN+S
Sbjct: 11  LVLAFAFFFCYVMSSGSYEYFQFVQQWPPTNCRVRIKRPCSKPRPLQNFTIHGLWPSNYS 70

Query: 63  NAKLI--CSGGDLQQNKLPHRLSTKLKKYWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPN 122
           N      C+G   +  K+  +L +KLK+ WP+++ GND  FW  EW KHGRCS   LN  
Sbjct: 71  NPTKPSNCNGSKYEDRKVYPKLRSKLKRSWPDVESGNDTRFWEGEWNKHGRCSEQTLNQM 130

Query: 123 QYLHTTIRMYLNYDLLGMLNAAGLSPSTTFRQYTYMENV--LKNAIGAVPSLRCNVNSQS 182
           QY   +  M+L+Y++  +L  A + P  T R +TY + V  +K A    P LRC  ++ +
Sbjct: 131 QYFEVSHDMWLSYNITEILRNASIVPHPT-RTWTYSDIVSPIKAATKRTPLLRCKTDTAT 190

Query: 183 NEDQLYEIVICFEENSTNLIDCTYAPG 205
           N + L+E+V C+  N+   IDC   PG
Sbjct: 191 NTELLHEVVFCYGYNALKQIDCNRTPG 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNMC_MOMCH2.3e-2834.62Ribonuclease MC OS=Momordica charantia PE=1 SV=1[more]
RNS1_ARATH4.8e-2631.48Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1[more]
RNLX_SOLLC3.1e-2531.46Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2[more]
RNS3_ARATH5.3e-2530.37Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1[more]
RN28_PANGI4.9e-2330.11Ribonuclease-like storage protein OS=Panax ginseng PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LDS5_CUCSA4.0e-4043.96Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1[more]
A0A0A0LAN6_CUCSA8.4e-3839.53Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1[more]
A0A0A0LAB0_CUCSA2.5e-3742.27Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1[more]
B5KLN0_9ROSA7.1e-3740.10S34-RNase OS=Prunus cerasus PE=3 SV=1[more]
A0FGT1_9ROSA6.1e-3639.05S-RNase OS=Prunus webbii GN=S1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT1G14220.12.4e-2830.70 Ribonuclease T2 family protein[more]
AT2G02990.12.7e-2731.48 ribonuclease 1[more]
AT1G26820.13.0e-2630.37 ribonuclease 3[more]
AT2G39780.15.8e-2232.09 ribonuclease 2[more]
AT1G14210.11.3e-2128.04 Ribonuclease T2 family protein[more]
Match NameE-valueIdentityDescription
gi|700203881|gb|KGN59014.1|5.8e-4043.96hypothetical protein Csa_3G743990 [Cucumis sativus][more]
gi|700203887|gb|KGN59020.1|1.2e-3739.53hypothetical protein Csa_3G745530 [Cucumis sativus][more]
gi|778683692|ref|XP_011651927.1|3.5e-3742.27PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
gi|659085730|ref|XP_008443571.1|6.0e-3740.45PREDICTED: ribonuclease MC-like [Cucumis melo][more]
gi|158563776|gb|ABW74347.1|1.0e-3640.10S34-RNase [Prunus cerasus][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0033897ribonuclease T2 activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR018188RNase_T2_His_AS_1
IPR001568RNase_T2-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g10030.1Cp4.1LG11g10030.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3DG3DSA:3.90.730.10coord: 20..210
score: 5.4
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 1..212
score: 1.4
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 22..199
score: 6.1
IPR001568Ribonuclease T2-likeunknownSSF55895Ribonuclease Rh-likecoord: 20..211
score: 2.62
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 50..57
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g10030CmoCh05G012420Cucurbita moschata (Rifu)cmocpeB721
The following gene(s) are paralogous to this gene:

None