Cp4.1LG11g09990 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pathogenesis-related protein PR-4
Location	Cp4.1LG11 : 8374917 .. 8376247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATGTAATGTTGTCCAAAGCTCAAAGTGCGAGCAACGTGAGGGCANTCCTGTCTATGTCTTGTAATGTTGTCCAAAGCTCAAAGTGCGAGCAACGTGAGGGCAACATTTAACTTCTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGAGTGCATTTTGTTCCACATGGGATGCCGACCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCGAGGACTCCTGTGGCCTATGCTTACTGGTACGATCGTTTCGAATGACTTTTTAAGTGCTTAAAAATATATTTTGTGTTTATGAACGTACTTTGAAAGACATTCTAATAGGCTCGTAATGATGTTCTGTTGGATGATAGAACCTTTAGCCTTTTACGTACGTCAAAAATTCAGGTTTTTTTTATGGATAATGTACTTGCATTATCGTTATATGGATGAATTATATCGAGATAACGTGGTAGGTATATAACAGCTCAAGTCACCGCTGGCAGATATTATCTTTTTTGGACTTTTCTTTTCAAGCTTCCTCTTGAGCTTTTTAAAACGCGTCTATTAAGAAGAGATTTCCACACTCTTATAAAGAATGTTTCGTTCTCTTCTCTAACAATTGTGGGATCTCACAATCCACACCCTTATAAAGAATATATAATGTTTATAACTGATGTTAATGATGTGTGACGGGTGAAGGTTTAATATTTAAATTTTATGAAAATTTAGTTAATAACCAGACATGCATTATAGATAAGTAATATTTTATAAAATAATAATTAAAAAAAAAACCCAACCAAACAACCTTAATCCAACCAAAAAAATAGAACGTTAGGTTGAGAACACTATTCGAGTTGCTCGAGTCACCAACCCAACCAGCTTGAAATTTCGAGTTAGTCTAAATGATTTTTCGAATTCAACCCAACAAGTATACAACCCTATAATGTGAATTTGTCACTCCCTCTCTATACCATTGTAATGGTTACTTTAATACGAGAGTAAAGTATTCATCTTTATAATCTGAACATAATTCAACTGAATAAAACATATATCGAATAAAAAGTCGAAAATTTGAATCGAGCGTTAGTTGCATGAAAAACTTATAATAGTTCATCTAATGGTGAATAAAATACATGAACATGCAGGTGACTAACACGGAAACAGACGCTCAACAAACCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTCGATTTGGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAATCAACTATGATTTTGTGAATTGTTGA

mRNA sequence

ATGTCATCTCAAAGTGCGAGCAACGTGAGGGCAACATTTAACTTCTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGACTAACACGGAAACAGACGCTCAACAAACCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTCGATTTGGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAATCAACTATGATTTTGTGAATTGTTGA

Coding sequence (CDS)

ATGTCATCTCAAAGTGCGAGCAACGTGAGGGCAACATTTAACTTCTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGACTAACACGGAAACAGACGCTCAACAAACCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTCGATTTGGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAATCAACTATGATTTTGTGAATTGTTGA

Protein sequence

MSSQSASNVRATFNFYNAPEINWDLNAVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVNC

Homology

[Close]

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.7e-19
Identity = 54/121 (44.63%), Postives = 62/121 (51.24%), Query Frame = 1


Query: 3   SQSASNVRATFNFYNAPEINWDLNAV---------------------------------- 62
           S SA NVRAT++ YN   + WDLNAV                                  
Sbjct: 77  SGSAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRD 136

Query: 63  --------TNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVN 82
                   TNT T AQ TVRIVDQC+NGGLDLDV VF+ +DTDGNGN  G L +NY FV+
Sbjct: 137 SCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVD 196

[Close]

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.3e-19
Identity = 53/119 (44.54%), Postives = 60/119 (50.42%), Query Frame = 1


Query: 5   SASNVRATFNFYNAPEINWDLNAV------------------------------------ 64
           SA NVRAT++ YN   + WDLNAV                                    
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 65  ------TNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVNC 82
                 TNT T AQ TVRIVDQC+NGGLDLD+ VFQ +DTDG GN  G L +NY FVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot
Match: PR4A_TOBAC (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.3e-18
Identity = 53/122 (43.44%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           ++QSA+NVR+T++ YN   INWDL A                                  
Sbjct: 24  AAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQ 83

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTNT T  Q TVRIVDQC+NGGLDLDV VF  LDT+G G   G LT+NY+FV
Sbjct: 84  DSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYEFV 143

[Close]

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot
Match: PR4B_TOBAC (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.6e-17
Identity = 52/122 (42.62%), Postives = 62/122 (50.82%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           ++QSA+NVR+T++ YN   INWDL A                                  
Sbjct: 24  AAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQ 83

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTNT T  Q TVRIVDQC+NGGLDLDV VF  LDT+G G   G L +NY+FV
Sbjct: 84  DSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYEFV 143

[Close]

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot
Match: PRP2_SOLLC (Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.4e-17
Identity = 52/122 (42.62%), Postives = 61/122 (50.00%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           ++QSA+NVRAT++ YN   INWDL                                    
Sbjct: 22  AAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPTGQ 81

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTNT T  Q+TVRIVDQC NGGLDLDV VF  LDT+G G   G L +NY+FV
Sbjct: 82  ASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYEFV 141

[Close]

BLAST of Cp4.1LG11g09990 vs. TrEMBL
Match: A0A0A0LG74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-26
Identity = 69/121 (57.02%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 3   SQSASNVRATFNFYNAPEINWDLNAV---------------------------------- 62
           +QS SNVRATFN YNAP+INWDLNAV                                  
Sbjct: 4   AQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQH 63

Query: 63  --------TNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVN 82
                   TN +T AQQTVRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGFLT+NYDFVN
Sbjct: 64  SCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVN 123

[Close]

BLAST of Cp4.1LG11g09990 vs. TrEMBL
Match: A0A088NF29_9FABA (Pseudo-hevein (Fragment) OS=Dipteryx odorata PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-21
Identity = 61/122 (50.00%), Postives = 69/122 (56.56%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           S+QSASNVRAT++ Y   + NWDL A                                  
Sbjct: 19  SAQSASNVRATYHLYQPEQHNWDLGAVSAYCATWDANKPLSWRSKYGWTAFCGPVGPQGQ 78

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTNT T AQQTVRIVDQC+NGGLDLD+GVFQ LDTDGNGNA G LT+NYDFV
Sbjct: 79  AACGKCLKVTNTRTQAQQTVRIVDQCSNGGLDLDIGVFQKLDTDGNGNAQGHLTVNYDFV 138

[Close]

BLAST of Cp4.1LG11g09990 vs. TrEMBL
Match: A0A068VJ77_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004164001 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.8e-20
Identity = 58/121 (47.93%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 3   SQSASNVRATFNFYNAPEINWDLNA----------------------------------- 62
           SQSASNVRAT++ YN   INWDLNA                                   
Sbjct: 22  SQSASNVRATYHLYNPQNINWDLNAARVYCATWDANKPLSWRRQYGWTAFCGPAGPRGQA 81

Query: 63  -------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVN 82
                  VTNT T AQ  VRIVDQC+NGGLDLD+G F+ +DT+G GNANGFL +NY+FVN
Sbjct: 82  ACGRCLRVTNTATRAQVVVRIVDQCSNGGLDLDIGPFRQIDTNGQGNANGFLRVNYEFVN 141

[Close]

BLAST of Cp4.1LG11g09990 vs. TrEMBL
Match: J3N9B8_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-19
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 1


Query: 5   SASNVRATFNFYNAPEINWDLNAVTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDG 64
           +AS V ATFN YN   I WDL AVTNT T A+   R+VDQC+NGGLDLDV VF+ +DTDG
Sbjct: 28  AASGVVATFNMYNPGSIGWDLRAVTNTATGARTVARVVDQCSNGGLDLDVAVFRQIDTDG 87

Query: 65  NGNANGFLTINYDFVNC 82
            G ANG L ++Y+FV+C
Sbjct: 88  GGMANGHLVVDYEFVDC 104

[Close]

BLAST of Cp4.1LG11g09990 vs. TrEMBL
Match: A0A067ET50_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032389mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.8e-19
Identity = 58/122 (47.54%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           ++QSASNVRAT++ YN   I WDLNA                                  
Sbjct: 19  AAQSASNVRATYHLYNPERIGWDLNAARAYCSTWDANKPLAWRRKYGWTAFCGPVGPRGQ 78

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTN  T AQ TVRIVDQC+NGGLDLDVGVF+ LDTDG GNA G L +NY FV
Sbjct: 79  AACGKCLRVTNRGTGAQATVRIVDQCSNGGLDLDVGVFRKLDTDGKGNAQGHLMVNYQFV 138

[Close]

BLAST of Cp4.1LG11g09990 vs. TAIR10
Match: AT3G04720.1 (AT3G04720.1 pathogenesis-related 4)

HSP 1 Score: 84.3 bits (207), Expect = 3.7e-17
Identity = 49/120 (40.83%), Postives = 61/120 (50.83%), Query Frame = 1


Query: 4   QSASNVRATFNFYNAPEINWDLNAVT---------------------------------- 63
           +SASNVRAT++FYN  + NWDL AV+                                  
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 64  --------NTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVNC 82
                   NT T+A  TVRIVDQC+NGGLDLDV +F  +DTDG G   G L ++Y FV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

[Close]

BLAST of Cp4.1LG11g09990 vs. NCBI nr
Match: gi|449442943|ref|XP_004139240.1| (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-26
Identity = 69/121 (57.02%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 3   SQSASNVRATFNFYNAPEINWDLNAV---------------------------------- 62
           +QS SNVRATFN YNAP+INWDLNAV                                  
Sbjct: 23  AQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQH 82

Query: 63  --------TNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVN 82
                   TN +T AQQTVRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGFLT+NYDFVN
Sbjct: 83  SCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVN 142

[Close]

BLAST of Cp4.1LG11g09990 vs. NCBI nr
Match: gi|700205679|gb|KGN60798.1| (hypothetical protein Csa_2G010340 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-26
Identity = 69/121 (57.02%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 3   SQSASNVRATFNFYNAPEINWDLNAV---------------------------------- 62
           +QS SNVRATFN YNAP+INWDLNAV                                  
Sbjct: 4   AQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPLGQH 63

Query: 63  --------TNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFVN 82
                   TN +T AQQTVRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGFLT+NYDFVN
Sbjct: 64  SCGLCLLVTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMNYDFVN 123

[Close]

BLAST of Cp4.1LG11g09990 vs. NCBI nr
Match: gi|1021524062|ref|XP_016205410.1| (PREDICTED: pathogenesis-related protein PR-4 isoform X1 [Arachis ipaensis])

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-22
Identity = 62/123 (50.41%), Postives = 71/123 (57.72%), Query Frame = 1


Query: 1   MSSQSASNVRATFNFYNAPEINWDLNA--------------------------------- 60
           +S QSA+NVRAT+N Y   + NWDLNA                                 
Sbjct: 21  VSGQSATNVRATYNLYYPEQHNWDLNAVSAYCATWDAGKPLAWRQKYGWTAFCGPVGPTG 80

Query: 61  ---------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDF 82
                    VTNT T+AQQTVRIVDQC+NGGLDLD+GVFQ LDTDGNGNA G LT+NYDF
Sbjct: 81  QAACGKCLKVTNTRTNAQQTVRIVDQCSNGGLDLDIGVFQKLDTDGNGNAQGHLTVNYDF 140

[Close]

BLAST of Cp4.1LG11g09990 vs. NCBI nr
Match: gi|1012182177|ref|XP_015968486.1| (PREDICTED: pathogenesis-related protein PR-4 [Arachis duranensis])

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 61/123 (49.59%), Postives = 71/123 (57.72%), Query Frame = 1


Query: 1   MSSQSASNVRATFNFYNAPEINWDLNA--------------------------------- 60
           +S QSA+NVRAT+N Y   + NWDLNA                                 
Sbjct: 21  VSGQSATNVRATYNLYYPEQHNWDLNAVSAYCATWDAGKPLAWRQKYGWTAFCGPVGPTG 80

Query: 61  ---------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDF 82
                    VTNT T+AQQTVRIVDQC+NGGLDLD+GVFQ LDTDGNGNA G LT+NY+F
Sbjct: 81  QAACGKCLKVTNTRTNAQQTVRIVDQCSNGGLDLDIGVFQKLDTDGNGNAQGHLTVNYNF 140

[Close]

BLAST of Cp4.1LG11g09990 vs. NCBI nr
Match: gi|684194203|gb|AIN56735.1| (pseudo-hevein, partial [Dipteryx odorata])

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-21
Identity = 61/122 (50.00%), Postives = 69/122 (56.56%), Query Frame = 1


Query: 2   SSQSASNVRATFNFYNAPEINWDLNA---------------------------------- 61
           S+QSASNVRAT++ Y   + NWDL A                                  
Sbjct: 19  SAQSASNVRATYHLYQPEQHNWDLGAVSAYCATWDANKPLSWRSKYGWTAFCGPVGPQGQ 78

Query: 62  --------VTNTETDAQQTVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTINYDFV 82
                   VTNT T AQQTVRIVDQC+NGGLDLD+GVFQ LDTDGNGNA G LT+NYDFV
Sbjct: 79  AACGKCLKVTNTRTQAQQTVRIVDQCSNGGLDLDIGVFQKLDTDGNGNAQGHLTVNYDFV 138

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WIN1_SOLTU	3.7e-19	44.63	Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1	[more]
WIN2_SOLTU	6.3e-19	44.54	Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1	[more]
PR4A_TOBAC	5.3e-18	43.44	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1	[more]
PR4B_TOBAC	2.6e-17	42.62	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1	[more]
PRP2_SOLLC	3.4e-17	42.62	Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of Cp4.1LG11g09990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG74_CUCSA	3.7e-26	57.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010340 PE=4 SV=1	[more]
A0A088NF29_9FABA	2.1e-21	50.00	Pseudo-hevein (Fragment) OS=Dipteryx odorata PE=2 SV=1	[more]
A0A068VJ77_COFCA	6.8e-20	47.93	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004164001 PE=4 SV=1	[more]
J3N9B8_ORYBR	1.5e-19	62.34	Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1	[more]
A0A067ET50_CITSI	9.8e-19	47.54	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032389mg PE=4 SV=1	[more]

BLAST of Cp4.1LG11g09990 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04720.1	3.7e-17	40.83	pathogenesis-related 4	[more]

BLAST of Cp4.1LG11g09990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442943\|ref\|XP_004139240.1\|	5.3e-26	57.02	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis sativus]	[more]
gi\|700205679\|gb\|KGN60798.1\|	5.3e-26	57.02	hypothetical protein Csa_2G010340 [Cucumis sativus]	[more]
gi\|1021524062\|ref\|XP_016205410.1\|	4.7e-22	50.41	PREDICTED: pathogenesis-related protein PR-4 isoform X1 [Arachis ipaensis]	[more]
gi\|1012182177\|ref\|XP_015968486.1\|	1.8e-21	49.59	PREDICTED: pathogenesis-related protein PR-4 [Arachis duranensis]	[more]
gi\|684194203\|gb\|AIN56735.1\|	3.0e-21	50.00	pseudo-hevein, partial [Dipteryx odorata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0050832	defense response to fungus
GO:0042742	defense response to bacterium

Vocabulary: **INTERPRO**
Term	Definition
IPR009009	RlpA-like_DPBB
IPR001153	Barwin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09990.1	Cp4.1LG11g09990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRODOM	PD004535		coord: 28..81 score: 2.0
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 56..80 score: 4.9E-17coord: 35..53 score: 4.9
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 28..81 score: 1.8
IPR001153	Barwin domain	PROFILE	PS51174	BARWIN_3	coord: 1..81 score: 23
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	G3DSA:2.40.40.10		coord: 28..81 score: 1.6
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 4..81 score: 9.07
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 28..81 score: 4.2
None	No IPR available	PANTHER	PTHR22595:SF62	HEVEIN-LIKE PREPROPROTEIN	coord: 28..81 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g09990	Cucurbita pepo (Zucchini)	cpecpeB002
Cp4.1LG11g09990	Cucurbita pepo (Zucchini)	cpecpeB000
Cp4.1LG11g09990	Cucurbita pepo (Zucchini)	cpecpeB139
Cp4.1LG11g09990	Cucumber (Gy14) v1	cgycpeB0351
Cp4.1LG11g09990	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g09990	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g09990	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g09990	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g09990	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g09990	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g09990	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g09990	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g09990	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g09990	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g09990	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g09990	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g09990	Silver-seed gourd	carcpeB1005
Cp4.1LG11g09990	Silver-seed gourd	carcpeB1494
Cp4.1LG11g09990	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g09990	Wax gourd	cpewgoB0114