Cp4.1LG11g09880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Prefoldin subunit 4
Location	Cp4.1LG11 : 8387789 .. 8389237 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAGGTAAACGAAACCCTAATCGAACTCGTATTGAACCACTAATTTTCCTTGTATCATACAAATTTCCTTTCTTTTTCCGTTTTCTGACAATGGCGTTTTTTATGTGCGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGTATTGATTTCATACGAGGAATCGGATATTTTAATGGTTTATTTTGCTCCTTACTTTAAATATCTGACGTCCTTGCTGATTGATGGATTTTGAGTATCGATGTGATATGAACTTCGAAGTTTCTCCTCTTGAATTTTGTGAGCGCTTGAAATGTTGCTAAAAACTTCAATTGAGTAGTTGCTTCTTATCCCATTTTCTTCTCAGATTCAATTTGTGTAACCACGGAGGAGGCAATTCGAGTTTTTTTTTTTAGTAAAACAAATGCCCGATAGAAGGGGTTAGATGAATCAAGTGATATATTGCCTAAAAGATTGATTATCTTGCTTTCAATTTGTACTGTGTCAATACACACCAGATGTTTTTTTGCTCTGTTCTACAGCATAGTATGTTGTTTTCTTTCCCATCTTTACTTTTTGGTGGTATTTGGGAGACTCTAGTTAGTGAAGCGATTCACCAATACTTGAACCTTGTGTCTCCTAAAGTTTTCCCTGCAACCAAATGTTTATTAGAGTGAGTGAGTTTGTGATGACTTTTGAGGGATTTTTTTTTTTTCNGGGTCAATACACACCAGATGTTTTTTTTTGCTCTGTTCTACAGCATAGTATGTTGTTTTCTTTCCCATCTTTACTTTGTGGTGGTATTTGGGAGACTCTAGTTAGTGAAGCGATTCATCAATTCTTGAACCTTGTGTCTCCTAAAGTTTGCCCTGCAACCAAATGTTTATCAGAGTGAGTGAGTGAGTTTGTGATGACTTTTGAGGGATTTTTTTTTCAATAAGAAATTTGGAAAAAAGCATTGGTTTGTTACTTCCTCGATGAGCATTCTAAAGTGCCTTCAAGGGAATTTTCAAAATCACTTTTGGTTACTGTAAAAGTCACGTTGAATTCACCTCTGACAGTCGCTTTTCGTAGGAAACAAANTTGTTACGTTGAATTCACCTCTGACAGTCGCTTTTCGTAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACGTGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

mRNA sequence

ATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACGTGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

Coding sequence (CDS)

ATGCAGCAGGGCGGAGGATCTGAATCGGAGGTCACATGGGAGGACCAACAGAATATTAATAAATTTAGTAGGTTGAACAATCGGTTCCATGAGCTTGAGGATGAGATTAGAACAGCGAAGGAAACAAATGATAATCTAGAGGATGCAAGTAATGAGTTGATTCTCAGTGATGAAGACGTGATTCGTTTTCATATTGGGGAAGTTTTTGCTCATGTACCAAGGGAAGAAGTAGAAGGCAGGTTGGAAGAAATGAAAGAGGAGAATGTTAAGAACTTGGAGAAACTCGAGGAAGAAAAGGATTCTATCGTGGCCCAGATGGCTGAGTTGAAGAAAATTCTGTATGGAAAGTTCAAAGACTCCATCAATCTAGAGGATGATTAA

Protein sequence

MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDVIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLEDD

Homology

[Close]

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot
Match: PFD4_AVEFA (Probable prefoldin subunit 4 OS=Avena fatua GN=VIP3 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-48
Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQG G+E++VTWEDQQNIN+F RLNNRFHEL DEIR AKE N+NLEDA NELIL DEDV
Sbjct: 1   MQQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAH+P ++VE RLE+MKE+  K LE+LEEEK+SI+AQMAELKKILYGKFKD+
Sbjct: 61  VRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDA 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot
Match: PFD4_ARATH (Probable prefoldin subunit 4 OS=Arabidopsis thaliana GN=AIP3 PE=1 SV=3)

HSP 1 Score: 175.3 bits (443), Expect = 4.4e-43
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 1


Query: 1   MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD 60
           MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 61  EDVIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKF 120
           E+++RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+EK+SIV QMA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 121 KDSINLEDD 127
           KDSINLE+D
Sbjct: 121 KDSINLEED 129

[Close]

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot
Match: PFD4_HUMAN (Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-16
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED- 60
           M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA ++++L+D+D 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDC 64

Query: 61  -VIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFK 120
            +I + IG+VF    +EE +  LEE K+   + ++ LE   +SI   +A+LK  LY KF 
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 DSINLEDD 127
            +INLE D
Sbjct: 125 SNINLEAD 132

[Close]

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot
Match: PFD4_BOVIN (Prefoldin subunit 4 OS=Bos taurus GN=PFDN4 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-16
Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED- 60
           M++    +  VT+EDQQ INKF+R  +R  EL++EI   K+   NLEDA  +++L+D+D 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDC 64

Query: 61  -VIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFK 120
            +I + IG+VF    +EE +  LEE K+   + ++ LE   +SI   +A+LK  LY KF 
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 DSINLEDD 127
            +INLE D
Sbjct: 125 SNINLEAD 132

[Close]

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot
Match: PFD4_DICDI (Probable prefoldin subunit 4 OS=Dictyostelium discoideum GN=pfdn4 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-12
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 1


Query: 8   ESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV-IRFHIG 67
           E+EV   DQ+ IN F RLNNR HEL  E +  +E  +   D+ ++L ++D+D   ++ +G
Sbjct: 14  ETEVCAADQKMINLFGRLNNRKHELMREKKAKQEDLEKATDSQDDLFIADDDSKFKYSMG 73

Query: 68  EVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDSINLED 126
           E F  V +E+ E  +E+   +  ++++K++ + + I  +  ELK ILY KFK+SINLE+
Sbjct: 74  EAFLEVNKEDAESLIEKYINKLEEDIKKIDSDINDINEKHKELKVILYAKFKNSINLEE 132

[Close]

BLAST of Cp4.1LG11g09880 vs. TrEMBL
Match: A0A0A0LFH2_CUCSA (Prefoldin subunit 4 OS=Cucumis sativus GN=Csa_2G010310 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.7e-57
Identity = 118/126 (93.65%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETN+NLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNENLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           IRF IGEVFAH+P+EEVEGRLE+MKEENV+NLEKL+EEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVENLEKLKEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Cp4.1LG11g09880 vs. TrEMBL
Match: A0A059B7E7_EUCGR (Prefoldin subunit 4 OS=Eucalyptus grandis GN=EUGRSUZ_H04324 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-51
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQ GGSE+EVTWEDQQNIN+FS+LNNRFHELEDEIR AKETNDNLEDASNELIL+DE+V
Sbjct: 1   MQQSGGSETEVTWEDQQNINRFSKLNNRFHELEDEIRIAKETNDNLEDASNELILTDEEV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVP++EVE R+E+MKE   KNLEKLEEEKDS++AQMAELKKILYGKF+DS
Sbjct: 61  VRFQIGEVFAHVPKDEVESRIEDMKEVTTKNLEKLEEEKDSVLAQMAELKKILYGKFRDS 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Cp4.1LG11g09880 vs. TrEMBL
Match: M0SPT9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-50
Identity = 106/126 (84.13%), Postives = 118/126 (93.65%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQ+G GSE++VTWEDQQNINKF RLNNRFHELEDEI+ AKETN+NLEDASNELILSDED+
Sbjct: 34  MQKGEGSEAQVTWEDQQNINKFGRLNNRFHELEDEIKVAKETNENLEDASNELILSDEDI 93

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVPREEVE RLE+MKE+  K LEKLEEEK+SI+AQMAELKKILYGKFKDS
Sbjct: 94  VRFQIGEVFAHVPREEVENRLEKMKEDASKELEKLEEEKESILAQMAELKKILYGKFKDS 153

Query: 121 INLEDD 127
           INLE+D
Sbjct: 154 INLEED 159

[Close]

BLAST of Cp4.1LG11g09880 vs. TrEMBL
Match: A0A061F1X3_THECC (Prefoldin subunit 4 OS=Theobroma cacao GN=TCM_026319 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-50
Identity = 108/127 (85.04%), Postives = 119/127 (93.70%), Query Frame = 1


Query: 1   MQQG-GGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDED 60
           MQQG GGSE+EVTWEDQQNINKF RLNNRFHELEDEI+ AKETNDNLEDASNELIL+DE+
Sbjct: 1   MQQGTGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNDNLEDASNELILTDEE 60

Query: 61  VIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKD 120
           V+RF IGEVFAHVP+EEVE R+EEMKE   KNLEKLEEEK+S++AQMAELKKILYGKFKD
Sbjct: 61  VVRFQIGEVFAHVPKEEVETRIEEMKEVTSKNLEKLEEEKESVLAQMAELKKILYGKFKD 120

Query: 121 SINLEDD 127
           SINLE+D
Sbjct: 121 SINLEED 127

[Close]

BLAST of Cp4.1LG11g09880 vs. TrEMBL
Match: M5WDI4_PRUPE (Prefoldin subunit 4 OS=Prunus persica GN=PRUPE_ppa013376mg PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.6e-50
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE+EVTWEDQQNINKF RLNNRFHEL+DEI+ AKE+N+NLEDASNELIL+DE+V
Sbjct: 1   MQQGGGSETEVTWEDQQNINKFGRLNNRFHELQDEIKFAKESNENLEDASNELILTDEEV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVP+EEVE R+EEMKE   KNLEKLEEEK+SI+AQMAELK+ILYGKFKDS
Sbjct: 61  VRFQIGEVFAHVPKEEVESRIEEMKEVTSKNLEKLEEEKESILAQMAELKQILYGKFKDS 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Cp4.1LG11g09880 vs. TAIR10
Match: AT1G08780.1 (AT1G08780.1 ABI3-interacting protein 3)

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-44
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 1


Query: 1   MQQGG---GSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD 60
           MQQ G   GSE EVTWEDQQNIN FSRLNNR H+L+D+I++AKE  +NLEDA NELIL+D
Sbjct: 1   MQQQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILAD 60

Query: 61  EDVIRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKF 120
           E+++RF IGEVFAHVPR++VE ++EEMKE   K+LEKLE+EK+SIV QMA LKK+LY KF
Sbjct: 61  EEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKF 120

Query: 121 KDSINLEDD 127
           KDSINLE+D
Sbjct: 121 KDSINLEED 129

[Close]

BLAST of Cp4.1LG11g09880 vs. NCBI nr
Match: gi|449442953|ref|XP_004139245.1| (PREDICTED: probable prefoldin subunit 4 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 5.3e-57
Identity = 118/126 (93.65%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETN+NLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNENLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           IRF IGEVFAH+P+EEVEGRLE+MKEENV+NLEKL+EEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVENLEKLKEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Cp4.1LG11g09880 vs. NCBI nr
Match: gi|659070669|ref|XP_008456105.1| (PREDICTED: probable prefoldin subunit 4 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 6.9e-57
Identity = 118/126 (93.65%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSD+DV
Sbjct: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDDDV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           IRF IGEVFAH+P+EEVEGRLE+MKEENV++L+KLEEEKDSIVAQMAELKKILYGKFKDS
Sbjct: 61  IRFQIGEVFAHIPKEEVEGRLEQMKEENVEHLKKLEEEKDSIVAQMAELKKILYGKFKDS 120

Query: 121 INLEDD 127
           INLEDD
Sbjct: 121 INLEDD 126

[Close]

BLAST of Cp4.1LG11g09880 vs. NCBI nr
Match: gi|702448077|ref|XP_010025012.1| (PREDICTED: probable prefoldin subunit 4 [Eucalyptus grandis])

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-51
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQ GGSE+EVTWEDQQNIN+FS+LNNRFHELEDEIR AKETNDNLEDASNELIL+DE+V
Sbjct: 1   MQQSGGSETEVTWEDQQNINRFSKLNNRFHELEDEIRIAKETNDNLEDASNELILTDEEV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVP++EVE R+E+MKE   KNLEKLEEEKDS++AQMAELKKILYGKF+DS
Sbjct: 61  VRFQIGEVFAHVPKDEVESRIEDMKEVTTKNLEKLEEEKDSVLAQMAELKKILYGKFRDS 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Cp4.1LG11g09880 vs. NCBI nr
Match: gi|645222685|ref|XP_008218277.1| (PREDICTED: probable prefoldin subunit 4 [Prunus mume])

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50
Identity = 106/126 (84.13%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE+EVTWEDQQNINKF RLNNRFHELEDEI+ AKE+N+NLEDASNELIL+DE+V
Sbjct: 1   MQQGGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKFAKESNENLEDASNELILTDEEV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVP+EEVE R+EEMKE   KNLEKLEEEK+SI+AQMAELK+ILYGKFKDS
Sbjct: 61  VRFQIGEVFAHVPKEEVESRIEEMKEATSKNLEKLEEEKESILAQMAELKQILYGKFKDS 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

[Close]

BLAST of Cp4.1LG11g09880 vs. NCBI nr
Match: gi|802758496|ref|XP_012089276.1| (PREDICTED: probable prefoldin subunit 4 isoform X1 [Jatropha curcas])

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50
Identity = 107/126 (84.92%), Postives = 117/126 (92.86%), Query Frame = 1


Query: 1   MQQGGGSESEVTWEDQQNINKFSRLNNRFHELEDEIRTAKETNDNLEDASNELILSDEDV 60
           MQQGGGSE EVTWEDQQNINKF RLNNRFHELEDEI+ AKETN+NLEDASNELIL+DE+V
Sbjct: 1   MQQGGGSEMEVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNENLEDASNELILTDEEV 60

Query: 61  IRFHIGEVFAHVPREEVEGRLEEMKEENVKNLEKLEEEKDSIVAQMAELKKILYGKFKDS 120
           +RF IGEVFAHVP+EEVE R+EEMKE   KNLEKLEEEKDS++AQMAELKKILYGKF DS
Sbjct: 61  VRFQIGEVFAHVPKEEVETRIEEMKEVTSKNLEKLEEEKDSLLAQMAELKKILYGKFGDS 120

Query: 121 INLEDD 127
           INLE+D
Sbjct: 121 INLEED 126

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD4_AVEFA	2.6e-48	76.98	Probable prefoldin subunit 4 OS=Avena fatua GN=VIP3 PE=2 SV=1	[more]
PFD4_ARATH	4.4e-43	71.32	Probable prefoldin subunit 4 OS=Arabidopsis thaliana GN=AIP3 PE=1 SV=3	[more]
PFD4_HUMAN	2.7e-16	41.41	Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1	[more]
PFD4_BOVIN	3.5e-16	41.41	Prefoldin subunit 4 OS=Bos taurus GN=PFDN4 PE=2 SV=1	[more]
PFD4_DICDI	1.4e-12	37.82	Probable prefoldin subunit 4 OS=Dictyostelium discoideum GN=pfdn4 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g09880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFH2_CUCSA	3.7e-57	93.65	Prefoldin subunit 4 OS=Cucumis sativus GN=Csa_2G010310 PE=3 SV=1	[more]
A0A059B7E7_EUCGR	4.0e-51	83.33	Prefoldin subunit 4 OS=Eucalyptus grandis GN=EUGRSUZ_H04324 PE=3 SV=1	[more]
M0SPT9_MUSAM	2.0e-50	84.13	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A061F1X3_THECC	2.0e-50	85.04	Prefoldin subunit 4 OS=Theobroma cacao GN=TCM_026319 PE=3 SV=1	[more]
M5WDI4_PRUPE	2.6e-50	83.33	Prefoldin subunit 4 OS=Prunus persica GN=PRUPE_ppa013376mg PE=3 SV=1	[more]

BLAST of Cp4.1LG11g09880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08780.1	2.5e-44	71.32	ABI3-interacting protein 3	[more]

BLAST of Cp4.1LG11g09880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442953\|ref\|XP_004139245.1\|	5.3e-57	93.65	PREDICTED: probable prefoldin subunit 4 [Cucumis sativus]	[more]
gi\|659070669\|ref\|XP_008456105.1\|	6.9e-57	93.65	PREDICTED: probable prefoldin subunit 4 [Cucumis melo]	[more]
gi\|702448077\|ref\|XP_010025012.1\|	5.7e-51	83.33	PREDICTED: probable prefoldin subunit 4 [Eucalyptus grandis]	[more]
gi\|645222685\|ref\|XP_008218277.1\|	1.3e-50	84.13	PREDICTED: probable prefoldin subunit 4 [Prunus mume]	[more]
gi\|802758496\|ref\|XP_012089276.1\|	1.7e-50	84.92	PREDICTED: probable prefoldin subunit 4 isoform X1 [Jatropha curcas]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09880.1	Cp4.1LG11g09880.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g09880	Cucsa.133160	Cucumber (Gy14) v1	cgycpeB0351
Cp4.1LG11g09880	CmaCh05G012100	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g09880	CmoCh05G012320	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g09880	Cla019797	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g09880	Csa2G010310	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g09880	MELO3C004390	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g09880	ClCG02G016730	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g09880	CSPI02G02860	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g09880	Lsi11G004360	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g09880	MELO3C004390.2	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g09880	CsaV3_2G004010	Cucumber (Chinese Long) v3	cpecucB0114
Cp4.1LG11g09880	Bhi06G001531	Wax gourd	cpewgoB0114
Cp4.1LG11g09880	CsGy2G002970	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g09880	Carg22988	Silver-seed gourd	carcpeB1494

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g09880	Cp4.1LG00g04280	Cucurbita pepo (Zucchini)	cpecpeB000

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g09880	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g09880	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g09880	Silver-seed gourd	carcpeB1005
Cp4.1LG11g09880	Cucurbita pepo (Zucchini)	cpecpeB139