Cp4.1LG11g09380 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG11g09380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDomain of unknown function (DUF1995)
LocationCp4.1LG11 : 7903706 .. 7905268 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTGTAAATTTAGATTCTTCCTGTATAATTTGCCATGCTTGGTCGGACAATTTGCAAGGGATCCATTGCTACTAACTCTGAAACGACCTACTTGTTCGAATGCCAGTTTTGAGACATTTCATGATTCCCCGATTCATTTCTATATCTCCCTAAACAGCTCCAAGCTGTGCTCATGATATTGTCCTCTTCGGACTTTCCATTTTGGGCTTCTCTTCAAAGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGACGTGGGATCTCACAATCCACACCTTTTCTTTTCAGGTTGAGCTCCTTATCCCCCAGCTACAGTTTCTGGACGATGAAGGTGCTCAAGCTGAACTCTGGGAACTGTCCAGAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGGTAAGTAGAATATGGAATTACCACTTCAAGGCCCTGTTTATCAATCAAGAATTGAATTTGGAGAACACTTGGAATATATTATACCATGGAATGTGTTACAAAGAAAACAGTAGAATTTCAAAGTTCTTAGGATCTTTATTCACTAGCTTTGTAATATACATATCTAAGTAATGCAAATTTAATTGCTAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGCTTCCTTCAAAATTTCCAGGTAAGTTCCATGTAACATACAAGTTGTGTACTCCAAAAGGTTGAGCTAAAGTCGATTTTCGCAATCTGAATCTGTATGTTCTCTTCGTATGGTTGTCGTTCTCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTACCAAATGTTGGAAAATGTGGAGAAAATAGCAGCTGCCCTCTCGGATGATCCGGTAAACATCTGAATCATTCCATTTGCTGTTGAAGTACATAATGGGATATATATATGGTTCAGTTTACTATAATATAGACTTACCCATATAACCATCTACTATATATTTATCTACCATATATATATATATATATATATATATATATATATATATATATATCTCCGTGACCATTTTTCAATTGAATAAGCTATAAATAAGCAGCGGACTCCATAACCCAACATCCACCTCTTTATTTTATTTTTCTACATTGATGGCAGCCAAGGCCTCTTATCATGTGGAATCCCCGTCTCATCAGCGAAGATGTAGGGGTCGGATTTAACGTTCGAAAATTGAGAAGATACTTTTTAAGGTAAATTTCAAAACTCTTAGTAGACATCAGCATTATGAAACAGTTACTTACAAAAGATGATCATCATAGCTCATAGTGTTCTAATGTGAAGTAAATGTCTAACCTCATACATAAAAGTTGCTAAGGAGAAAAGAGGTCTCATATACAAGAGGCTCTAAACTTAGGATTTGTCCAACTCAACCTCTACTTTGTTCTTTTTTGTGCAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTAA

mRNA sequence

ATGTTGCTAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGCTTCCTTCAAAATTTCCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTACCAAATGATTTGTCCAACTCAACCTCTACTTTGTTCTTTTTTGTGCAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTAA

Coding sequence (CDS)

ATGTTGCTAGTTTTCTTGGAGTCAGTCATTGAGGAAACAAAATGTGAGAAAGTTAAAGCTGTGTTTCCAGATGCTGGGGCCGCTGCACTTCTTGAATATCGATGGAAAGATGCTTCCTTCAAAATTTCCAGCTTAAGCGACCGAAAACCTGTAGATACTGCAGATGAGATAGTTGTCATGGTTGTTCCTGATTACCAAATGATTTGTCCAACTCAACCTCTACTTTGTTCTTTTTTGTGCAGCACATTTACAACAGTCTACTCCATGAGGCCTTTGCCATCTGGTGCTGTATTTAGAGCTTATCCTGGGTAA

Protein sequence

MLLVFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVPDYQMICPTQPLLCSFLCSTFTTVYSMRPLPSGAVFRAYPG
BLAST of Cp4.1LG11g09380 vs. TrEMBL
Match: A0A0A0LLR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022800 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 9.5e-35
Identity = 87/132 (65.91%), Postives = 92/132 (69.70%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLES++EET CEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVD ADEIVVMVVP
Sbjct: 145 VFLESLMEETNCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDIADEIVVMVVP 204

Query: 64  DYQMIC------------PTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFTTVYSMRP
Sbjct: 205 DYQMLANVEKIAAALSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRP 264

BLAST of Cp4.1LG11g09380 vs. TrEMBL
Match: B9RF60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431490 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28
Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           +FL+++IEET C+KVKA+FPDAGAAALL+Y+WKDA+F  +SLSDRKPV+  DEIVVMVVP
Sbjct: 144 IFLDTLIEETGCQKVKAIFPDAGAAALLKYQWKDATFGFASLSDRKPVENEDEIVVMVVP 203

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  S FTTVYSMRP
Sbjct: 204 DYQMLGYVEKIASNLSDDPPRPLIMWNPRLISEDVGVGINVRNLRRYFLSAFTTVYSMRP 263

BLAST of Cp4.1LG11g09380 vs. TrEMBL
Match: W9R0M0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001174 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28
Identity = 72/132 (54.55%), Postives = 89/132 (67.42%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           +FL+++IE+T C+KVKA+FPDAGA+ALL+Y+WKDA+F  SSLSDRKPV++ DEI+VMVVP
Sbjct: 150 IFLDTLIEKTGCQKVKAIFPDAGASALLKYKWKDAAFGFSSLSDRKPVESEDEIMVMVVP 209

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFTTVYSMRP
Sbjct: 210 DYQMLGYVEKIASQLSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRP 269

BLAST of Cp4.1LG11g09380 vs. TrEMBL
Match: A0A087G9E8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G257400 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-28
Identity = 74/132 (56.06%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLE++IEET CEKVKAVFPDAGAAALL+Y+WKDA+F  +SLSDRKPV+  DEI+VMVVP
Sbjct: 132 VFLETLIEETGCEKVKAVFPDAGAAALLKYQWKDAAFGFASLSDRKPVEKEDEIIVMVVP 191

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  S+FTTVYSMRP
Sbjct: 192 DYQMVEYVEKIAKGLADDPPRPLIMWNPRLVSEDVGVGFNVRNLRRYFLSSFTTVYSMRP 251

BLAST of Cp4.1LG11g09380 vs. TrEMBL
Match: A0A0D3E138_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-27
Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLE++IEET CE+VKAVFPDAGAAALL+Y+WKDA+F  +SLSDRKPV+  DEI+VMVVP
Sbjct: 141 VFLETLIEETGCERVKAVFPDAGAAALLKYKWKDAAFGFASLSDRKPVEKEDEIIVMVVP 200

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  S+FTTVYSMRP
Sbjct: 201 DYQMLEYVEKIAKGLADDPPRPLVMWNPRLISEEVGVGFNVRKLRRYFLSSFTTVYSMRP 260

BLAST of Cp4.1LG11g09380 vs. TAIR10
Match: AT5G27560.1 (AT5G27560.1 Domain of unknown function (DUF1995))

HSP 1 Score: 130.2 bits (326), Expect = 7.4e-31
Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLE++I+ET CE+VKAVFPDAGAAALL+YRWKDA+F  +SLSDRKPV+  DEI+VMVVP
Sbjct: 145 VFLETLIKETGCERVKAVFPDAGAAALLKYRWKDATFGFASLSDRKPVEKEDEIIVMVVP 204

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  S+FTTVYSMRP
Sbjct: 205 DYQMLEYVEKIANGLADDPPRPLIMWNPRLISEEVGVGFNVRKLRRYFLSSFTTVYSMRP 264

BLAST of Cp4.1LG11g09380 vs. NCBI nr
Match: gi|449442817|ref|XP_004139177.1| (PREDICTED: uncharacterized protein LOC101209109 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 87/132 (65.91%), Postives = 92/132 (69.70%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLES++EET CEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVD ADEIVVMVVP
Sbjct: 145 VFLESLMEETNCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDIADEIVVMVVP 204

Query: 64  DYQMIC------------PTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFTTVYSMRP
Sbjct: 205 DYQMLANVEKIAAALSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRP 264

BLAST of Cp4.1LG11g09380 vs. NCBI nr
Match: gi|659070325|ref|XP_008454557.1| (PREDICTED: uncharacterized protein LOC103494946 [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 88/132 (66.67%), Postives = 92/132 (69.70%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           VFLES+IEET CEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVD ADEIVVMVVP
Sbjct: 145 VFLESLIEETNCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDIADEIVVMVVP 204

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFTTVYSMRP
Sbjct: 205 DYQMLENVQKIAAALSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRP 264

BLAST of Cp4.1LG11g09380 vs. NCBI nr
Match: gi|720025087|ref|XP_010263837.1| (PREDICTED: uncharacterized protein LOC104602002 [Nelumbo nucifera])

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-28
Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           +FL+++IEET C+KVKA+FPDAGAAALL+YRWKDA+F  SSLSDRKPV+  DE+VVM+VP
Sbjct: 145 IFLDTLIEETGCQKVKAIFPDAGAAALLKYRWKDAAFGFSSLSDRKPVENEDELVVMLVP 204

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFT VYSMRP
Sbjct: 205 DYQMLEYVERIASTLSDDPPRPLIMWNPRLVSEDVGVGFNVRKLRRYFLSTFTVVYSMRP 264

BLAST of Cp4.1LG11g09380 vs. NCBI nr
Match: gi|255542632|ref|XP_002512379.1| (PREDICTED: uncharacterized protein LOC8285563 [Ricinus communis])

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-28
Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           +FL+++IEET C+KVKA+FPDAGAAALL+Y+WKDA+F  +SLSDRKPV+  DEIVVMVVP
Sbjct: 144 IFLDTLIEETGCQKVKAIFPDAGAAALLKYQWKDATFGFASLSDRKPVENEDEIVVMVVP 203

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  S FTTVYSMRP
Sbjct: 204 DYQMLGYVEKIASNLSDDPPRPLIMWNPRLISEDVGVGINVRNLRRYFLSAFTTVYSMRP 263

BLAST of Cp4.1LG11g09380 vs. NCBI nr
Match: gi|703083477|ref|XP_010092223.1| (hypothetical protein L484_001174 [Morus notabilis])

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-28
Identity = 72/132 (54.55%), Postives = 89/132 (67.42%), Query Frame = 1

Query: 4   VFLESVIEETKCEKVKAVFPDAGAAALLEYRWKDASFKISSLSDRKPVDTADEIVVMVVP 63
           +FL+++IE+T C+KVKA+FPDAGA+ALL+Y+WKDA+F  SSLSDRKPV++ DEI+VMVVP
Sbjct: 150 IFLDTLIEKTGCQKVKAIFPDAGASALLKYKWKDAAFGFSSLSDRKPVESEDEIMVMVVP 209

Query: 64  DYQMI------------CPTQPL--------------------LCSFLCSTFTTVYSMRP 104
           DYQM+             P +PL                    L  +  STFTTVYSMRP
Sbjct: 210 DYQMLGYVEKIASQLSDDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRP 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LLR1_CUCSA9.5e-3565.91Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022800 PE=4 SV=1[more]
B9RF60_RICCO2.3e-2855.30Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1431490 PE=4 SV=1[more]
W9R0M0_9ROSA2.3e-2854.55Uncharacterized protein OS=Morus notabilis GN=L484_001174 PE=4 SV=1[more]
A0A087G9E8_ARAAL5.0e-2856.06Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G257400 PE=4 SV=1[more]
A0A0D3E138_BRAOL1.1e-2755.30Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G27560.17.4e-3155.30 Domain of unknown function (DUF1995)[more]
Match NameE-valueIdentityDescription
gi|449442817|ref|XP_004139177.1|1.4e-3465.91PREDICTED: uncharacterized protein LOC101209109 [Cucumis sativus][more]
gi|659070325|ref|XP_008454557.1|1.4e-3466.67PREDICTED: uncharacterized protein LOC103494946 [Cucumis melo][more]
gi|720025087|ref|XP_010263837.1|1.9e-2855.30PREDICTED: uncharacterized protein LOC104602002 [Nelumbo nucifera][more]
gi|255542632|ref|XP_002512379.1|3.2e-2855.30PREDICTED: uncharacterized protein LOC8285563 [Ricinus communis][more]
gi|703083477|ref|XP_010092223.1|3.2e-2854.55hypothetical protein L484_001174 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g09380.1Cp4.1LG11g09380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35509FAMILY NOT NAMEDcoord: 4..103
score: 1.2
NoneNo IPR availablePANTHERPTHR35509:SF1SUBFAMILY NOT NAMEDcoord: 4..103
score: 1.2

The following gene(s) are paralogous to this gene:

None