Cp4.1LG11g08900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g08900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionF-box protein
LocationCp4.1LG11 : 7245780 .. 7246103 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACGACTCCCACCGACGCCGGGAAATTGTCCCTCGTCTCGTCGATGTTTCGATCAGCGGCGGAATCCGATGTCGTTTGGAGCAGATTTTTGCCTAAAAACTACGCCGAAATCGTGGCTGCCTCTGATATCTCCGGCGAATCGCCACTCTGTTCGAAGAGAGAAGCTTTCTTCCGACTCTGTTCTCCGATCCTAATCGACGGCGGAAAAAAGGTAAATAAACAAAATAATTCCGTCTTCCATTTCGTAACTAATCCGAAATAG

mRNA sequence

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACGACTCCCACCGACGCCGGGAAATTGTCCCTCGTCTCGTCGATGTTTCGATCAGCGGCGGAATCCGATGTCGTTTGGAGCAGATTTTTGCCTAAAAACTACGCCGAAATCGTGGCTGCCTCTGATATCTCCGGCGAATCGCCACTCTGTTCGAAGAGAGAAGCTTTCTTCCGACTCTGTTCTCCGATCCTAATCGACGGCGGAAAAAAGGTAAATAAACAAAATAATTCCGTCTTCCATTTCGTAACTAATCCGAAATAG

Coding sequence (CDS)

ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACGACTCCCACCGACGCCGGGAAATTGTCCCTCGTCTCGTCGATGTTTCGATCAGCGGCGGAATCCGATGTCGTTTGGAGCAGATTTTTGCCTAAAAACTACGCCGAAATCGTGGCTGCCTCTGATATCTCCGGCGAATCGCCACTCTGTTCGAAGAGAGAAGCTTTCTTCCGACTCTGTTCTCCGATCCTAATCGACGGCGGAAAAAAGGTAAATAAACAAAATAATTCCGTCTTCCATTTCGTAACTAATCCGAAATAG

Protein sequence

MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGESPLCSKREAFFRLCSPILIDGGKKVNKQNNSVFHFVTNPK
Homology
[Close]
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-14
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 3   GISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +V+ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  DISGESPLCSKREAFFRLC-SPILIDGGKK 92
            +       SK+E +F LC +P+LI+ GKK
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKK 141

[Close]
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-13
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 9  VLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGES 68
          +LPE CV+ ILS TTP D    + VSS+FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2  MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRS-TDPHR 61

Query: 69 PLCSKREAFFRLCSPILIDGGKKVNK 95
             SK+E +  LC  ILID G+K+ K
Sbjct: 62 IFSSKKELYRCLCESILIDNGRKIFK 86

[Close]
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 1 

Query: 3   GISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAAS 62
           G++ +  LPE+CVS I+S T+P DA  L+ VS  F SA +SD+VW +F+P  Y  +++  
Sbjct: 32  GVAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQ- 91

Query: 63  DISGESPLCSKREAFFRLC-SPILIDGGKK 92
             S      SK+E +F LC   +LID GKK
Sbjct: 92  --SRAFKFLSKKELYFALCDKSVLIDDGKK 118

[Close]
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 8.9e-13
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 10 LPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGESP 69
          LPE+C+S I+S TTP DA   + VS  F SA +SD VW +FLP +Y+ +V  S +     
Sbjct: 16 LPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPESRV----- 75

Query: 70 LCSKREAFFRLCS-PILIDGGKK 92
            SK+E  F LC  P+LI+GGKK
Sbjct: 76 FLSKKELCFSLCRVPLLIEGGKK 93

[Close]
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=3 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 8.9e-13
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
           ++G S    LPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP +Y+ +V 
Sbjct: 41  ISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVP 100

Query: 61  ASDISGESPLCSKREAFFRLC-SPILI-DGGKK--VNKQNNSVFHFVTNPK 108
            S +       SK+E +F +C +P+L+ DGGK   + K+N     F+ +PK
Sbjct: 101 PSRV-----FSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKC-FMLSPK 145

[Close]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match: A0A0A0LLX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032230 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-36
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
          MAGISSIGVLPEDC+SAILSLTTP+DAGKL+LVSSMFRSAAESDVVW RFLP+NY EIVA
Sbjct: 1  MAGISSIGVLPEDCISAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 92
          AS++SGE+PL SKREAFFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match: A0A0A0LJT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032730 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.8e-36
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
          MAGISSIGVLPEDCVSAILSLT+P+DAGKL+LVSSMFRSAAESDVVW RFLP+NY EIVA
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTSPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 92
          AS++SGE+PL SKREAFFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match: A0A061FAP6_THECC (Phloem protein 2-B15, putative OS=Theobroma cacao GN=TCM_026697 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-18
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 9  VLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGES 68
          +LPEDC+SAILS TTP DA + SLVSS FRSA +SDVVW  FLP +Y EIV    +S  S
Sbjct: 1  MLPEDCLSAILSFTTPEDAFRSSLVSSTFRSAVDSDVVWESFLPPDYPEIV----LSSVS 60

Query: 69 PL--CSKREAFFRLCSPILIDGGKKVN 94
          PL   SK+E F  LC P+LIDGG KVN
Sbjct: 61 PLKFSSKKELFQCLCDPVLIDGGNKVN 83

[Close]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match: F6I4N5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02000 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-18
Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 7  IGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISG 66
          +  LPE CVS ILSLT+P DA K SLVSS+FR+AAESDVVW RFLP +Y +I+  S ++ 
Sbjct: 7  LNTLPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDIL--SRLAE 66

Query: 67 ESPLCSKREAFFRLCSPILIDGGKK 92
             + SK+E F RLC P LIDGGKK
Sbjct: 67 PLVVSSKKELFLRLCDPSLIDGGKK 89

[Close]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match: A5BIA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022467 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-18
Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1 

Query: 10 LPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGESP 69
          LPE CVS ILSLT+P DA K SLVSS+FR+AAESDVVW RFLP +Y +I+  S ++    
Sbjct: 10 LPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDIL--SRLAEPLV 69

Query: 70 LCSKREAFFRLCSPILIDGGKK 92
          + SK+E F RLC P LIDGGKK
Sbjct: 70 VSSKKELFLRLCDPSLIDGGKK 89

[Close]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match: AT2G02240.1 (AT2G02240.1 F-box family protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-15
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 3   GISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAAS 62
           G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +V+ S
Sbjct: 57  GTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS 116

Query: 63  DISGESPLCSKREAFFRLC-SPILIDGGKK 92
            +       SK+E +F LC +P+LI+ GKK
Sbjct: 117 RV-----FASKKELYFALCHNPVLIEDGKK 141

[Close]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match: AT1G09155.1 (AT1G09155.1 phloem protein 2-B15)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-14
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 9  VLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGES 68
          +LPE CV+ ILS TTP D    + VSS+FR A +SD VW +FLP +Y  +++ S      
Sbjct: 2  MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRS-TDPHR 61

Query: 69 PLCSKREAFFRLCSPILIDGGKKVNK 95
             SK+E +  LC  ILID G+K+ K
Sbjct: 62 IFSSKKELYRCLCESILIDNGRKIFK 86

[Close]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match: AT2G02340.1 (AT2G02340.1 phloem protein 2-B8)

HSP 1 Score: 75.5 bits (184), Expect = 2.2e-14
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 1 

Query: 3   GISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAAS 62
           G++ +  LPE+CVS I+S T+P DA  L+ VS  F SA +SD+VW +F+P  Y  +++  
Sbjct: 32  GVAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQ- 91

Query: 63  DISGESPLCSKREAFFRLC-SPILIDGGKK 92
             S      SK+E +F LC   +LID GKK
Sbjct: 92  --SRAFKFLSKKELYFALCDKSVLIDDGKK 118

[Close]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match: AT2G02250.1 (AT2G02250.1 phloem protein 2-B2)

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-14
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
           ++G S    LPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP +Y+ +V 
Sbjct: 41  ISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVP 100

Query: 61  ASDISGESPLCSKREAFFRLC-SPILI-DGGKK--VNKQNNSVFHFVTNPK 108
            S +       SK+E +F +C +P+L+ DGGK   + K+N     F+ +PK
Sbjct: 101 PSRV-----FSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKC-FMLSPK 145

[Close]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match: AT2G02320.1 (AT2G02320.1 phloem protein 2-B7)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 1 

Query: 6   SIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDIS 65
           S+G LPE+C+S I+S T+P DA   +LVS  F SA +SD+VW +F+P  Y  +++ S   
Sbjct: 39  SLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRS--- 98

Query: 66  GESPLCSKREAFFRLC-SPILIDGGKK 92
                 SK+E FF LC   +LI+  KK
Sbjct: 99  --QHFSSKKELFFALCDESVLINVSKK 120

[Close]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match: gi|778666957|ref|XP_004144818.2| (PREDICTED: F-box protein PP2-B15-like [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 4.4e-36
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
          MAGISSIGVLPEDC+SAILSLTTP+DAGKL+LVSSMFRSAAESDVVW RFLP+NY EIVA
Sbjct: 1  MAGISSIGVLPEDCISAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 92
          AS++SGE+PL SKREAFFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match: gi|778666961|ref|XP_011648846.1| (PREDICTED: F-box protein PP2-B13-like [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 9.8e-36
Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
          MAGISSIGVLPEDCVSAILSLT+P+DAGKL+LVSSMFRSAAESDVVW RFLP+NY EIVA
Sbjct: 1  MAGISSIGVLPEDCVSAILSLTSPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 92
          AS++SGE+PL SKREAFFRLCSPIL+D GKK
Sbjct: 61 ASEMSGEAPLRSKREAFFRLCSPILVDEGKK 91

[Close]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match: gi|659070216|ref|XP_008453983.1| (PREDICTED: F-box protein PP2-B13-like [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-35
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 1 

Query: 1  MAGISSIGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVA 60
          M  ISSIGVLPEDCVSAILSLTTP+DAGKL+LVSSMFRSAAESDVVW RFLP+NY EIVA
Sbjct: 1  MVAISSIGVLPEDCVSAILSLTTPSDAGKLALVSSMFRSAAESDVVWGRFLPENYEEIVA 60

Query: 61 ASDISGESPLCSKREAFFRLCSPILIDGGKK 92
          AS+ISGE+PL SKREAFFRLCSPIL++ GKK
Sbjct: 61 ASEISGEAPLSSKREAFFRLCSPILVEEGKK 91

[Close]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match: gi|590644346|ref|XP_007031057.1| (Phloem protein 2-B15, putative [Theobroma cacao])

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 9  VLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISGES 68
          +LPEDC+SAILS TTP DA + SLVSS FRSA +SDVVW  FLP +Y EIV    +S  S
Sbjct: 1  MLPEDCLSAILSFTTPEDAFRSSLVSSTFRSAVDSDVVWESFLPPDYPEIV----LSSVS 60

Query: 69 PL--CSKREAFFRLCSPILIDGGKKVN 94
          PL   SK+E F  LC P+LIDGG KVN
Sbjct: 61 PLKFSSKKELFQCLCDPVLIDGGNKVN 83

[Close]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match: gi|296089714|emb|CBI39533.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 99.4 bits (246), Expect = 4.1e-18
Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 1 

Query: 7   IGVLPEDCVSAILSLTTPTDAGKLSLVSSMFRSAAESDVVWSRFLPKNYAEIVAASDISG 66
           +  LPE CVS ILSLT+P DA K SLVSS+FR+AAESDVVW RFLP +Y +I+  S ++ 
Sbjct: 267 LNTLPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDIL--SRLAE 326

Query: 67  ESPLCSKREAFFRLCSPILIDGGKK 92
              + SK+E F RLC P LIDGGKK
Sbjct: 327 PLVVSSKKELFLRLCDPSLIDGGKK 349

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g08900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB95_ARATH2.8e-1446.67F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1[more]
P2B15_ARATH2.3e-1345.35F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=2[more]
PP2B8_ARATH4.0e-1343.33Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=3 SV=1[more]
PP2B3_ARATH8.9e-1348.19F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2[more]
PP2B2_ARATH8.9e-1340.54Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=3 SV=2[more]
BLAST of Cp4.1LG11g08900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLX5_CUCSA3.1e-3686.81Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032230 PE=4 SV=1[more]
A0A0A0LJT8_CUCSA6.8e-3686.81Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032730 PE=4 SV=1[more]
A0A061FAP6_THECC1.3e-1863.22Phloem protein 2-B15, putative OS=Theobroma cacao GN=TCM_026697 PE=4 SV=1[more]
F6I4N5_VITVI2.9e-1861.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02000 PE=4 SV=... [more]
A5BIA7_VITVI4.9e-1863.41Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022467 PE=4 SV=1[more]
BLAST of Cp4.1LG11g08900 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02240.11.6e-1546.67 F-box family protein[more]
AT1G09155.11.3e-1445.35 phloem protein 2-B15[more]
AT2G02340.12.2e-1443.33 phloem protein 2-B8[more]
AT2G02250.15.0e-1440.54 phloem protein 2-B2[more]
AT2G02320.11.1e-1343.68 phloem protein 2-B7[more]
BLAST of Cp4.1LG11g08900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778666957|ref|XP_004144818.2|4.4e-3686.81PREDICTED: F-box protein PP2-B15-like [Cucumis sativus][more]
gi|778666961|ref|XP_011648846.1|9.8e-3686.81PREDICTED: F-box protein PP2-B13-like [Cucumis sativus][more]
gi|659070216|ref|XP_008453983.1|3.7e-3585.71PREDICTED: F-box protein PP2-B13-like [Cucumis melo][more]
gi|590644346|ref|XP_007031057.1|1.8e-1863.22Phloem protein 2-B15, putative [Theobroma cacao][more]
gi|296089714|emb|CBI39533.3|4.1e-1861.18unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g08900.1Cp4.1LG11g08900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 10..50
score: 1.
IPR001810F-box domainSMARTSM00256fbox_2coord: 10..50
score: 0
IPR001810F-box domainPROFILEPS50181FBOXcoord: 4..50
score:
IPR001810F-box domainunknownSSF81383F-box domaincoord: 3..77
score: 9.94
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 4..49
score: 5.
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 1..91
score: 1.5
NoneNo IPR availablePANTHERPTHR32278:SF6F-BOX PROTEIN PP2-B1-RELATEDcoord: 1..91
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g08900Cucsa.090950Cucumber (Gy14) v1cgycpeB0168
Cp4.1LG11g08900CmaCh05G010950Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g08900CmoCh05G011100Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g08900Cla019941Watermelon (97103) v1cpewmB113
Cp4.1LG11g08900Lsi11G006060Bottle gourd (USVL1VR-Ls)cpelsiB075
Cp4.1LG11g08900MELO3C004213.2Melon (DHL92) v3.6.1cpemedB123
Cp4.1LG11g08900CsaV3_2G006760Cucumber (Chinese Long) v3cpecucB0115
Cp4.1LG11g08900Bhi06G001297Wax gourdcpewgoB0124
Cp4.1LG11g08900CsGy2G004540Cucumber (Gy14) v2cgybcpeB168
Cp4.1LG11g08900Carg23283Silver-seed gourdcarcpeB1229
Cp4.1LG11g08900Carg12023Silver-seed gourdcarcpeB0800
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG11g08900Cp4.1LG07g08830Cucurbita pepo (Zucchini)cpecpeB139
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g08900Cucurbita maxima (Rimu)cmacpeB171
Cp4.1LG11g08900Cucurbita maxima (Rimu)cmacpeB370
Cp4.1LG11g08900Cucurbita moschata (Rifu)cmocpeB147
Cp4.1LG11g08900Cucurbita moschata (Rifu)cmocpeB334
Cp4.1LG11g08900Wild cucumber (PI 183967)cpecpiB088
Cp4.1LG11g08900Wild cucumber (PI 183967)cpecpiB100
Cp4.1LG11g08900Cucumber (Chinese Long) v2cpecuB104
Cp4.1LG11g08900Cucumber (Chinese Long) v2cpecuB092
Cp4.1LG11g08900Bottle gourd (USVL1VR-Ls)cpelsiB095
Cp4.1LG11g08900Watermelon (Charleston Gray)cpewcgB104
Cp4.1LG11g08900Watermelon (Charleston Gray)cpewcgB119
Cp4.1LG11g08900Watermelon (97103) v1cpewmB104
Cp4.1LG11g08900Watermelon (97103) v1cpewmB126
Cp4.1LG11g08900Melon (DHL92) v3.5.1cpemeB084
Cp4.1LG11g08900Melon (DHL92) v3.5.1cpemeB099
Cp4.1LG11g08900Cucumber (Gy14) v2cgybcpeB028
Cp4.1LG11g08900Melon (DHL92) v3.6.1cpemedB108
Cp4.1LG11g08900Silver-seed gourdcarcpeB0098
Cp4.1LG11g08900Cucumber (Chinese Long) v3cpecucB0100
Cp4.1LG11g08900Cucurbita pepo (Zucchini)cpecpeB109