Cp4.1LG11g08760 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g08760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectinesterase
Location	Cp4.1LG11 : 7055176 .. 7056549 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTTACAAGGGCCCTTGACTTTAATATTCAATCCGTCATTGTTGTTGACAAGTCTGGCAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTGAAGTCAACCCTGGTGAATACAGGTAATACAACACATGAATATGCCTAATTCTAGTGAGGTTATGTTCTAATATGGTCATTTTGTAGAGAAATGGTGACAATCCCGTCAAAAAAATCATTCATTTATCTACAAGGGGGTCACCGCAGTACGACGGTTATCACTTTCGATGGTCATCAACAAACAAATACTAGCGCTACATTTAATTCAATGGCTGATAACATTATTGCAAGAGGCATTACCTTTGAGGTATTGCAGCTTCTATAAACTAAACTTAAAGCTCATAGTTGCATGATAAGTATAAGTATAGTATGCATCTGAGCAGTCACAGAAGACTTCGATTGTTCAATCATTGATCATAGTCTATCTTGTATGAATTGTTGCTTTTATGCTTGCGTTGCACGCAGAACTCGTTCAACCTGGCAAATGCTCCACAATTGTTTGTTCAAAGTGCTGAAACATTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCACTATTTCAAACGTTGTTACATTGAAGGTGCCATAGATTTCATCTTTGGTAATGGTCAATCAATTTATGAGGTAATCAGTTCGACTTCTTTTTTTCTACAAATTGTCATTGGCGATGCTCTACTAATAACACAATGGGAGAGACTAAAAATGCAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGATACATTACTGCACAAGGTCGACAATCCGAAAACGATCCAAGCGGATTTGTATTTCAACAGTGCACCATAACGGGGTCGGGCAAAGCTTTTTTGGGGAGAGCATATGGTCCTTTTTCCAGAGTTATATTTAAAGATACGAACATGGGGAAAGTCGTAGCACCAGAGGGATGGGATGCTTGGCACTTCAAGGGCCAAGAGTAAGTTCAAAACCTAAAAGATAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAACAAAAGCTTTTCGAGTTCTAGATTTTATTGTCAAGTTCTAATTCGTGTTACATTCTGTAGGACAAATTTTGTGTACATCGAGTCCAATAGTAGGGGGACAGGATCTTCCCCTTCCAAAAGGGTTTCATGGGCAATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATTGGTGGATTCCCAATTTCCTTTGA

mRNA sequence

ATGAACTTTACAAGGGCCCTTGACTTTAATATTCAATCCGTCATTGTTGTTGACAAGTCTGGCAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTGAAGTCAACCCTGGTGAATACAGAGAAATGGTGACAATCCCGTCAAAAAAATCATTCATTTATCTACAAGGGGGTCACCGCAGTACGACGGTTATCACTTTCGATGGTCATCAACAAACAAATACTAGCGCTACATTTAATTCAATGGCTGATAACATTATTGCAAGAGGCATTACCTTTGAGAACTCGTTCAACCTGGCAAATGCTCCACAATTGTTTGTTCAAAGTGCTGAAACATTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCACTATTTCAAACGTTGTTACATTGAAGGTGCCATAGATTTCATCTTTGGTAATGGTCAATCAATTTATGAGGTAATCAGTTCGACTTCTTTTTTTCTACAAATTGTCATTGGCGATGCTCTACTAATAACACAATGGGAGAGACTAAAAATGCAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGATACATTACTGCACAAGGTCGACAATCCGAAAACGATCCAAGCGGATTTGTATTTCAACAGTGCACCATAACGGGGTCGGGCAAAGCTTTTTTGGGGAGAGCATATGGTCCTTTTTCCAGAGTTATATTTAAAGATACGAACATGGGGAAAGTCGTAGCACCAGAGGGATGGGATGCTTGGCACTTCAAGGGCCAAGAGACAAATTTTGTGTACATCGAGTCCAATAGTAGGGGGACAGGATCTTCCCCTTCCAAAAGGGTTTCATGGGCAATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATTGGTGGATTCCCAATTTCCTTTGA

Coding sequence (CDS)

ATGAACTTTACAAGGGCCCTTGACTTTAATATTCAATCCGTCATTGTTGTTGACAAGTCTGGCAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTGAAGTCAACCCTGGTGAATACAGAGAAATGGTGACAATCCCGTCAAAAAAATCATTCATTTATCTACAAGGGGGTCACCGCAGTACGACGGTTATCACTTTCGATGGTCATCAACAAACAAATACTAGCGCTACATTTAATTCAATGGCTGATAACATTATTGCAAGAGGCATTACCTTTGAGAACTCGTTCAACCTGGCAAATGCTCCACAATTGTTTGTTCAAAGTGCTGAAACATTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCACTATTTCAAACGTTGTTACATTGAAGGTGCCATAGATTTCATCTTTGGTAATGGTCAATCAATTTATGAGGTAATCAGTTCGACTTCTTTTTTTCTACAAATTGTCATTGGCGATGCTCTACTAATAACACAATGGGAGAGACTAAAAATGCAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGATACATTACTGCACAAGGTCGACAATCCGAAAACGATCCAAGCGGATTTGTATTTCAACAGTGCACCATAACGGGGTCGGGCAAAGCTTTTTTGGGGAGAGCATATGGTCCTTTTTCCAGAGTTATATTTAAAGATACGAACATGGGGAAAGTCGTAGCACCAGAGGGATGGGATGCTTGGCACTTCAAGGGCCAAGAGACAAATTTTGTGTACATCGAGTCCAATAGTAGGGGGACAGGATCTTCCCCTTCCAAAAGGGTTTCATGGGCAATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATTGGTGGATTCCCAATTTCCTTTGA

Protein sequence

MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPNFL

Homology

[Close]

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-72
Identity = 146/330 (44.24%), Postives = 187/330 (56.67%), Query Frame = 1


Query: 12  QSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGH 71
           Q  + VD+SG GNF TIQ AIDSVP+NN  W  I V  G YRE + IP +K FI L G  
Sbjct: 31  QQQVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAG 90

Query: 72  RSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQALA 131
           +  T + +D H     S TF+++ADN + + ITF NS+N  +  ++         T A+A
Sbjct: 91  KRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPR----TPAVA 150

Query: 132 ARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFF 191
           A I GDKSAF S GF G QDTLWD  GRHYF RC I+GA+DFIFG GQSIY         
Sbjct: 151 ALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIY--------- 210

Query: 192 LQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTI 251
                              Q C+I V  G L     GYITAQGR +  D +GF+F  C +
Sbjct: 211 -------------------QSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLV 270

Query: 252 TGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSP 311
            G+G AFLGR +  +SRVIF ++N+  VV PEGWDAW+F G E   V+ E    G+G++ 
Sbjct: 271 YGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANI 328

Query: 312 SKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
            +RV W      S +   +  SFIN+  W+
Sbjct: 331 GRRVKWVKKLSESAIQNLADLSFINRGGWV 328

[Close]

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-71
Identity = 145/327 (44.34%), Postives = 188/327 (57.49%), Query Frame = 1


Query: 15  IVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGHRST 74
           ++VD+SG GNF TIQ AIDSVP+NN  W  I V  G YRE +TIP KK FI + G  + +
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 75  TVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQALAARI 134
           T + +D H     S TF ++ADN + + ITF NS+N  +  ++           A+AA I
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPR----VPAVAAFI 148

Query: 135 YGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFFLQI 194
            GDKSAF S GF G QDTLWD  GRHYF RC I+GA+DFI G+GQSIY            
Sbjct: 149 GGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIY------------ 208

Query: 195 VIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGS 254
                           Q C+I V  G L     GYITAQGR + ND +GFVF  C + G 
Sbjct: 209 ----------------QSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVHGF 268

Query: 255 GKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSPSKR 314
           GKA+LGRA+ P+SRVIF ++N+  VV P GW  W+++G E    Y E    G+GS+ S+R
Sbjct: 269 GKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRR 323

Query: 315 VSWAMTQGSSQLSGYSVKSFINQDWWI 342
             W     +S +   +  SFIN+  W+
Sbjct: 329 AKWVKKLSASAVQHLADLSFINRGGWV 323

[Close]

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.7e-70
Identity = 143/332 (43.07%), Postives = 189/332 (56.93%), Query Frame = 1


Query: 11  IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGG 70
           I   I+V+ +    FKT+Q+AIDS+PL N  W++I ++ G Y E VTIP  K +IY+QGG
Sbjct: 37  IAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQGG 96

Query: 71  HRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQAL 130
               T+I +  HQ TNTSATF S   NII  GITF+N +N+A++      S+ T    A+
Sbjct: 97  GIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIASS------SSPT--KPAV 156

Query: 131 AARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSF 190
           AA + GDK A I   F GFQDTL+D  GRHY+KRC I G IDFIFG  QSI+E       
Sbjct: 157 AAMMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFE------- 216

Query: 191 FLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVN-QGYITAQGRQSENDPSGFVFQQC 250
                                GC + + VG+ P     G ITAQGR S  D  GFVF+ C
Sbjct: 217 ---------------------GCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC 276

Query: 251 TITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGS 310
           T+ GSGKA LGRA+  +SRVIF  +     + P GWDAW  KGQE +  ++E    G G+
Sbjct: 277 TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGA 332

Query: 311 SPSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
             SKRV W        +  ++  +FI+++ W+
Sbjct: 337 DTSKRVPWLTKASEKDVLQFTNLTFIDEEGWL 332

[Close]

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 265.4 bits (677), Expect = 8.8e-70
Identity = 141/335 (42.09%), Postives = 191/335 (57.01%), Query Frame = 1


Query: 11  IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGG 70
           I   I VD +G GNF T+Q+AIDS+   N+ W+++    G YRE VTIP +K FIYLQG 
Sbjct: 31  IAYTITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQGK 90

Query: 71  HRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQAL 130
               TVI +D HQ T+ SATF + AD+I+  GITF+N++N+       V + +     A+
Sbjct: 91  GIEQTVIEYDDHQATDISATFTAFADDIVISGITFKNTYNI-------VPNNKREIVPAV 150

Query: 131 AARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSF 190
           AAR+ GD+       F G QDTL+D KGRHY+KRC I G IDFIFG GQS+++       
Sbjct: 151 AARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKE------ 210

Query: 191 FLQIVIGDALLITQWERLKMQGCLIYVNVGLL-PEVNQGYITAQGRQSENDPSGFVFQQC 250
                                 C + + +G+  P+   G ITA  R S +D  GFVF  C
Sbjct: 211 ----------------------CTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC 270

Query: 251 TITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGS 310
           T+TG GK  LGRA+G  +RVIF  + +  VV P GWDAW  KG E +  ++E+   G G+
Sbjct: 271 TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGA 330

Query: 311 SPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPNF 345
             S+RV W      S++ G++  SFI+QD WI  F
Sbjct: 331 DTSQRVPWLKKLSLSEVDGFASVSFIDQDGWISRF 330

[Close]

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 124/277 (44.77%), Postives = 164/277 (59.21%), Query Frame = 1


Query: 70  GHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFN-LANAPQLFVQSAETFYTQ 129
           G R TT IT++GH  T+ S+TF S   +I+ R ++  N++N L +  +    S +     
Sbjct: 44  GQRVTT-ITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDI--KP 103

Query: 130 ALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISST 189
           A+A  +YGDKSAF +C F G QDT+WD  GRH+FK CYIEGAIDFIFG+GQS+YE     
Sbjct: 104 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYE----- 163

Query: 190 SFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFVFQ 249
                                   C I    G L  +V+ GYITAQGR S++DPSGFVF 
Sbjct: 164 -----------------------DCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFL 223

Query: 250 QCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGT 309
           + +++GS   +LGRAYGPFSRVIF  T++  VV PEGW +WH+ G E +F Y E   +G 
Sbjct: 224 RGSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGA 283

Query: 310 GSSPSKRVSWAMTQGSSQL-SGYSVKSFINQDWWIPN 344
           GS  S+RV W     S      +S+ +FI+QD WI N
Sbjct: 284 GSDMSRRVPWIDKLHSFYTKQQFSISNFIDQDQWISN 289

[Close]

BLAST of Cp4.1LG11g08760 vs. TrEMBL
Match: A0A0A0LH00_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_2G034610 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-122
Identity = 220/345 (63.77%), Postives = 253/345 (73.33%), Query Frame = 1


Query: 1   MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPS 60
           +N  R     IQSV++VDKSG GNF+T+QAAIDSVP NNN W+KI++NPG Y+E VTIP 
Sbjct: 24  VNQARDFVLTIQSVVIVDKSGNGNFQTVQAAIDSVPPNNNHWIKIQINPGVYKEKVTIPL 83

Query: 61  KKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQ 120
           +K FIYL+G   S TVITFD HQQT+TSATF S   NII RGITFENSFNL  AP+LF  
Sbjct: 84  EKPFIYLEGADSSNTVITFDDHQQTDTSATFTSRPPNIIVRGITFENSFNLREAPELFSC 143

Query: 121 SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQS 180
              T+ TQA+AARIYGDKSAF +CGFKG+QDTLWDV+GRH+F  CYIEGAIDFIFG+GQS
Sbjct: 144 DDGTYITQAIAARIYGDKSAFFNCGFKGYQDTLWDVQGRHFFSHCYIEGAIDFIFGSGQS 203

Query: 181 IYEVISSTSFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSEND 240
           +YE                             C+I VNV  LP+V QGYITAQ RQS  D
Sbjct: 204 VYE----------------------------DCMINVNVASLPQVYQGYITAQSRQSAAD 263

Query: 241 PSGFVFQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYI 300
           PSGFVF++CTI GSGKA LGRAYGPFSRVIFKD  MG VVAPEGW AWHFKG+E NF+Y+
Sbjct: 264 PSGFVFKECTIKGSGKALLGRAYGPFSRVIFKDAIMGSVVAPEGWYAWHFKGKEENFMYV 323

Query: 301 ESNSRGTGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPNFL 346
           E N  G G+S S RV WA T  +S L+G+SV+SFINQD WIP  L
Sbjct: 324 EENCTGPGASTSMRVPWAKTLDASHLTGFSVESFINQDGWIPTVL 340

[Close]

BLAST of Cp4.1LG11g08760 vs. TrEMBL
Match: A0A061F313_THECC (Pectinesterase OS=Theobroma cacao GN=TCM_026775 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.1e-87
Identity = 172/331 (51.96%), Postives = 212/331 (64.05%), Query Frame = 1


Query: 13  SVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGHR 72
           S IVVDKSGKGNF +IQ+AIDS+P NN +W+K+ +NPG Y E V IP  K  I L+G  R
Sbjct: 35  STIVVDKSGKGNFNSIQSAIDSIPSNNAQWIKVRINPGVYTEKVVIPIDKPCIVLEGQDR 94

Query: 73  STTVITFDGHQQTNTSATFNSMADNIIARGITFENSFN-LANAPQLFVQSAETFYTQALA 132
           S T ITF  H +T+ S TF S ADNI+A+GITF+NS+N L    +L  +      +QA+A
Sbjct: 95  SVTTITFYAHDRTDRSCTFTSFADNIVAKGITFKNSYNHLLLLERLSSERPIPGVSQAVA 154

Query: 133 ARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFF 192
           ARI GDKSAF  CGF G QDTLWD  GRHYF +C+IEGA+DFIFG GQS+YE        
Sbjct: 155 ARILGDKSAFFQCGFLGLQDTLWDAIGRHYFYQCHIEGAVDFIFGYGQSLYE-------- 214

Query: 193 LQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFVFQQCT 252
                                C I V  G    ++  GYITAQGRQS NDPSGFVF++  
Sbjct: 215 --------------------DCSINVTAGAFSSQIPLGYITAQGRQSSNDPSGFVFKRGE 274

Query: 253 ITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSS 312
           I G+ + +LGRAYGP+SRVIF++T M   V  EGWDAW + G+E NF+Y E N +G GS 
Sbjct: 275 IFGNTQPYLGRAYGPYSRVIFQETTMNAEVVSEGWDAWRYPGKEENFMYAEVNCQGAGSD 334

Query: 313 PSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
            S+RV W      SQL+ +S  SFI+ D WI
Sbjct: 335 TSRRVPWEKKLNPSQLNQFSRSSFIDNDGWI 337

[Close]

BLAST of Cp4.1LG11g08760 vs. TrEMBL
Match: B9STE8_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1318720 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 7.9e-86
Identity = 160/333 (48.05%), Postives = 215/333 (64.56%), Query Frame = 1


Query: 10  NIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQG 69
           N+ S + V KSG   FKTIQ AIDS+P +NNKW+KI V+PG Y E V IP +K  I+L+G
Sbjct: 35  NVASTVTVGKSGHEQFKTIQTAIDSIPQSNNKWIKITVSPGVYMEKVNIPEEKPCIFLEG 94

Query: 70  GHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQA 129
             RS + I F+ H++T+TSATF+S+ADN +A GITF+NS+N A      ++  +    QA
Sbjct: 95  SGRSLSTIVFNAHEETDTSATFSSLADNFLATGITFQNSYNRA------LKEEDEKIRQA 154

Query: 130 LAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTS 189
           +AA+++GDKSAF  CGF GFQDTLWD KGRHYF  CYIEGAIDFIFGNGQS Y       
Sbjct: 155 VAAKLFGDKSAFYECGFVGFQDTLWDEKGRHYFYNCYIEGAIDFIFGNGQSFY------- 214

Query: 190 FFLQIVIGDALLITQWERLKMQGCLIYV-NVGLLPEVNQGYITAQGRQSENDPSGFVFQQ 249
                                Q CL+   +  +   V  GYITAQ R S  + +GFVF++
Sbjct: 215 ---------------------QDCLLNATSPAVAGNVEAGYITAQSRGSNTETTGFVFRK 274

Query: 250 CTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTG 309
            +++GS + +LGRAYGP+SRVIF +T    +V+P+GW+AWHF+G++ N VY E + +G G
Sbjct: 275 GSVSGSSQTYLGRAYGPYSRVIFHETTFNAIVSPQGWNAWHFQGRQGNLVYTEIDCKGPG 333

Query: 310 SSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
           S  SKRV W       ++  +S  SFI++D W+
Sbjct: 335 SDTSKRVPWMKKLDQEEICKFSRSSFIDEDGWL 333

[Close]

BLAST of Cp4.1LG11g08760 vs. TrEMBL
Match: A0A058ZWZ8_EUCGR (Pectinesterase OS=Eucalyptus grandis GN=EUGRSUZ_L00260 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85
Identity = 163/338 (48.22%), Postives = 212/338 (62.72%), Query Frame = 1


Query: 7   LDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIY 66
           +D N  + I VD+ G G+F ++Q AI+SVP  NNKW+ I +NPG Y+EMVTIP  K  I+
Sbjct: 31  MDTNYGNTITVDQHGSGHFTSVQVAINSVPSGNNKWISIRINPGTYKEMVTIPPDKPCIF 90

Query: 67  LQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFY 126
           LQG  R +T+IT++ H+QT+TSATF S  DNI+ +GITF+NS+N     + + +S E   
Sbjct: 91  LQGKGRDSTIITYNSHEQTDTSATFTSSPDNIVVQGITFKNSYN-----RYWKESNEPPL 150

Query: 127 TQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVIS 186
            QALAAR+YGDK  F  CGF G QDTLWDV+GRHY+  CYIEGAIDFIFG+GQSI+E   
Sbjct: 151 VQALAARVYGDKCVFFECGFLGLQDTLWDVQGRHYYGSCYIEGAIDFIFGSGQSIFE--- 210

Query: 187 STSFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFV 246
                                     C + V   L P  +    ITAQGR S  DPSGFV
Sbjct: 211 -------------------------DCTMNVTATLPPYRLQYSCITAQGRASPGDPSGFV 270

Query: 247 FQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSR 306
           F++  + GSG   LGRAYGP+SRV+F  T +   VAP+GWD WH +G+E N +Y E +  
Sbjct: 271 FERGAVIGSGPYLLGRAYGPYSRVVFHKTLLSAGVAPQGWDPWHCQGREDNIMYAEVDCE 330

Query: 307 GTGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPN 344
           GTGS  S+RV W      +QL  +S   F++Q+ W+ N
Sbjct: 331 GTGSDTSQRVQWEKHLDKTQLQYFSRSYFLDQEGWLAN 335

[Close]

BLAST of Cp4.1LG11g08760 vs. TrEMBL
Match: B9I6Y8_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0013s00950g PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.6e-84
Identity = 166/335 (49.55%), Postives = 212/335 (63.28%), Query Frame = 1


Query: 11  IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGG 70
           ++  IVVD SGKG+F  IQ AIDS+P+NN++W+K+ +NPG Y E VTIP  K  I+L+G 
Sbjct: 35  VRKTIVVDHSGKGHFIKIQDAIDSIPINNDQWIKVRINPGTYIEQVTIPEDKPCIFLEGR 94

Query: 71  HRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLF--VQSAETFYTQ 130
            R+ T IT++ H+ T+TSATF S   NI+A+GITF+NS+NL     +   ++        
Sbjct: 95  DRTLTTITYNAHESTDTSATFTSSPSNIVAKGITFKNSYNLPFKQNINYGIKIPGVGVAP 154

Query: 131 ALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISST 190
           AL+ARIYGDKSAF  C F G QDTLWDV+GRH+F  CYIEGA+DFIFG GQS YE     
Sbjct: 155 ALSARIYGDKSAFYDCAFLGVQDTLWDVEGRHHFFNCYIEGAVDFIFGAGQSFYE----- 214

Query: 191 SFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQ 250
                                  GC I V        ++G ITAQGR+  NDPSGF+F  
Sbjct: 215 -----------------------GCSINVT-------SKGVITAQGREFPNDPSGFIFSG 274

Query: 251 CTITG--SGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRG 310
           CTI+G    +AFLGRAY PFSRVIF+D+   KVV P GW+AW + GQE NF Y+E + +G
Sbjct: 275 CTISGIEGVRAFLGRAYRPFSRVIFQDSYFSKVVDPLGWNAWGYAGQEENFTYVEVDCKG 334

Query: 311 TGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
            GS+ SKRV W     + Q   +S  SFI+QD W+
Sbjct: 335 PGSNKSKRVPWVRKPSTGQHELFSKPSFIDQDGWL 334

[Close]

BLAST of Cp4.1LG11g08760 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 273.9 bits (699), Expect = 1.4e-73
Identity = 146/330 (44.24%), Postives = 187/330 (56.67%), Query Frame = 1


Query: 12  QSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGH 71
           Q  + VD+SG GNF TIQ AIDSVP+NN  W  I V  G YRE + IP +K FI L G  
Sbjct: 31  QQQVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAG 90

Query: 72  RSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQALA 131
           +  T + +D H     S TF+++ADN + + ITF NS+N  +  ++         T A+A
Sbjct: 91  KRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPR----TPAVA 150

Query: 132 ARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFF 191
           A I GDKSAF S GF G QDTLWD  GRHYF RC I+GA+DFIFG GQSIY         
Sbjct: 151 ALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIY--------- 210

Query: 192 LQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTI 251
                              Q C+I V  G L     GYITAQGR +  D +GF+F  C +
Sbjct: 211 -------------------QSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLV 270

Query: 252 TGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSP 311
            G+G AFLGR +  +SRVIF ++N+  VV PEGWDAW+F G E   V+ E    G+G++ 
Sbjct: 271 YGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANI 328

Query: 312 SKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
            +RV W      S +   +  SFIN+  W+
Sbjct: 331 GRRVKWVKKLSESAIQNLADLSFINRGGWV 328

[Close]

BLAST of Cp4.1LG11g08760 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-72
Identity = 145/327 (44.34%), Postives = 188/327 (57.49%), Query Frame = 1


Query: 15  IVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGHRST 74
           ++VD+SG GNF TIQ AIDSVP+NN  W  I V  G YRE +TIP KK FI + G  + +
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 75  TVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQALAARI 134
           T + +D H     S TF ++ADN + + ITF NS+N  +  ++           A+AA I
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPR----VPAVAAFI 148

Query: 135 YGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFFLQI 194
            GDKSAF S GF G QDTLWD  GRHYF RC I+GA+DFI G+GQSIY            
Sbjct: 149 GGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIY------------ 208

Query: 195 VIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGS 254
                           Q C+I V  G L     GYITAQGR + ND +GFVF  C + G 
Sbjct: 209 ----------------QSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVHGF 268

Query: 255 GKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSPSKR 314
           GKA+LGRA+ P+SRVIF ++N+  VV P GW  W+++G E    Y E    G+GS+ S+R
Sbjct: 269 GKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRR 323

Query: 315 VSWAMTQGSSQLSGYSVKSFINQDWWI 342
             W     +S +   +  SFIN+  W+
Sbjct: 329 AKWVKKLSASAVQHLADLSFINRGGWV 323

[Close]

BLAST of Cp4.1LG11g08760 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 265.8 bits (678), Expect = 3.8e-71
Identity = 143/332 (43.07%), Postives = 189/332 (56.93%), Query Frame = 1


Query: 11  IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGG 70
           I   I+V+ +    FKT+Q+AIDS+PL N  W++I ++ G Y E VTIP  K +IY+QGG
Sbjct: 37  IAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQGG 96

Query: 71  HRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQAL 130
               T+I +  HQ TNTSATF S   NII  GITF+N +N+A++      S+ T    A+
Sbjct: 97  GIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIASS------SSPT--KPAV 156

Query: 131 AARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSF 190
           AA + GDK A I   F GFQDTL+D  GRHY+KRC I G IDFIFG  QSI+E       
Sbjct: 157 AAMMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFE------- 216

Query: 191 FLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVN-QGYITAQGRQSENDPSGFVFQQC 250
                                GC + + VG+ P     G ITAQGR S  D  GFVF+ C
Sbjct: 217 ---------------------GCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC 276

Query: 251 TITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGS 310
           T+ GSGKA LGRA+  +SRVIF  +     + P GWDAW  KGQE +  ++E    G G+
Sbjct: 277 TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGA 332

Query: 311 SPSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
             SKRV W        +  ++  +FI+++ W+
Sbjct: 337 DTSKRVPWLTKASEKDVLQFTNLTFIDEEGWL 332

[Close]

BLAST of Cp4.1LG11g08760 vs. TAIR10
Match: AT2G47280.1 (AT2G47280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 265.4 bits (677), Expect = 4.9e-71
Identity = 141/335 (42.09%), Postives = 191/335 (57.01%), Query Frame = 1


Query: 11  IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGG 70
           I   I VD +G GNF T+Q+AIDS+   N+ W+++    G YRE VTIP +K FIYLQG 
Sbjct: 31  IAYTITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQGK 90

Query: 71  HRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQAL 130
               TVI +D HQ T+ SATF + AD+I+  GITF+N++N+       V + +     A+
Sbjct: 91  GIEQTVIEYDDHQATDISATFTAFADDIVISGITFKNTYNI-------VPNNKREIVPAV 150

Query: 131 AARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSF 190
           AAR+ GD+       F G QDTL+D KGRHY+KRC I G IDFIFG GQS+++       
Sbjct: 151 AARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKE------ 210

Query: 191 FLQIVIGDALLITQWERLKMQGCLIYVNVGLL-PEVNQGYITAQGRQSENDPSGFVFQQC 250
                                 C + + +G+  P+   G ITA  R S +D  GFVF  C
Sbjct: 211 ----------------------CTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC 270

Query: 251 TITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGS 310
           T+TG GK  LGRA+G  +RVIF  + +  VV P GWDAW  KG E +  ++E+   G G+
Sbjct: 271 TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGA 330

Query: 311 SPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPNF 345
             S+RV W      S++ G++  SFI+QD WI  F
Sbjct: 331 DTSQRVPWLKKLSLSEVDGFASVSFIDQDGWISRF 330

[Close]

BLAST of Cp4.1LG11g08760 vs. TAIR10
Match: AT5G26810.1 (AT5G26810.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 224.6 bits (571), Expect = 9.7e-59
Identity = 124/277 (44.77%), Postives = 164/277 (59.21%), Query Frame = 1


Query: 70  GHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFN-LANAPQLFVQSAETFYTQ 129
           G R TT IT++GH  T+ S+TF S   +I+ R ++  N++N L +  +    S +     
Sbjct: 44  GQRVTT-ITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDI--KP 103

Query: 130 ALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISST 189
           A+A  +YGDKSAF +C F G QDT+WD  GRH+FK CYIEGAIDFIFG+GQS+YE     
Sbjct: 104 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYE----- 163

Query: 190 SFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFVFQ 249
                                   C I    G L  +V+ GYITAQGR S++DPSGFVF 
Sbjct: 164 -----------------------DCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFL 223

Query: 250 QCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGT 309
           + +++GS   +LGRAYGPFSRVIF  T++  VV PEGW +WH+ G E +F Y E   +G 
Sbjct: 224 RGSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGA 283

Query: 310 GSSPSKRVSWAMTQGSSQL-SGYSVKSFINQDWWIPN 344
           GS  S+RV W     S      +S+ +FI+QD WI N
Sbjct: 284 GSDMSRRVPWIDKLHSFYTKQQFSISNFIDQDQWISN 289

[Close]

BLAST of Cp4.1LG11g08760 vs. NCBI nr
Match: gi|700205889|gb|KGN61008.1| (hypothetical protein Csa_2G034610 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 2.6e-122
Identity = 220/345 (63.77%), Postives = 253/345 (73.33%), Query Frame = 1


Query: 1   MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPS 60
           +N  R     IQSV++VDKSG GNF+T+QAAIDSVP NNN W+KI++NPG Y+E VTIP 
Sbjct: 24  VNQARDFVLTIQSVVIVDKSGNGNFQTVQAAIDSVPPNNNHWIKIQINPGVYKEKVTIPL 83

Query: 61  KKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQ 120
           +K FIYL+G   S TVITFD HQQT+TSATF S   NII RGITFENSFNL  AP+LF  
Sbjct: 84  EKPFIYLEGADSSNTVITFDDHQQTDTSATFTSRPPNIIVRGITFENSFNLREAPELFSC 143

Query: 121 SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQS 180
              T+ TQA+AARIYGDKSAF +CGFKG+QDTLWDV+GRH+F  CYIEGAIDFIFG+GQS
Sbjct: 144 DDGTYITQAIAARIYGDKSAFFNCGFKGYQDTLWDVQGRHFFSHCYIEGAIDFIFGSGQS 203

Query: 181 IYEVISSTSFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLPEVNQGYITAQGRQSEND 240
           +YE                             C+I VNV  LP+V QGYITAQ RQS  D
Sbjct: 204 VYE----------------------------DCMINVNVASLPQVYQGYITAQSRQSAAD 263

Query: 241 PSGFVFQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYI 300
           PSGFVF++CTI GSGKA LGRAYGPFSRVIFKD  MG VVAPEGW AWHFKG+E NF+Y+
Sbjct: 264 PSGFVFKECTIKGSGKALLGRAYGPFSRVIFKDAIMGSVVAPEGWYAWHFKGKEENFMYV 323

Query: 301 ESNSRGTGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPNFL 346
           E N  G G+S S RV WA T  +S L+G+SV+SFINQD WIP  L
Sbjct: 324 EENCTGPGASTSMRVPWAKTLDASHLTGFSVESFINQDGWIPTVL 340

[Close]

BLAST of Cp4.1LG11g08760 vs. NCBI nr
Match: gi|659071556|ref|XP_008460603.1| (PREDICTED: probable pectinesterase 66 [Cucumis melo])

HSP 1 Score: 444.9 bits (1143), Expect = 1.3e-121
Identity = 226/373 (60.59%), Postives = 270/373 (72.39%), Query Frame = 1


Query: 1   MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEY------RE 60
           +N  RA D  +QSV+VVDKSG+G+F+T+QAAIDSVP NNN+W+KI++NPG Y      RE
Sbjct: 24  VNHARAFDLTVQSVVVVDKSGRGDFQTVQAAIDSVPPNNNQWIKIQINPGVYNWQTFCRE 83

Query: 61  MVTIPSKKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFE-------- 120
            VTIP +K FIYL+G  RS T+ITFD HQQT+TSATF S   NIIARGITFE        
Sbjct: 84  KVTIPPEKPFIYLEGADRSNTIITFDDHQQTDTSATFTSRPPNIIARGITFEVLWLLKTE 143

Query: 121 -----------------NSFNLANAPQLFVQSAETFYTQALAARIYGDKSAFISCGFKGF 180
                            NSFNL  AP+LFV    T+ TQA+AARIYGDKSAF +CGFKG+
Sbjct: 144 FIFIASFEILKPKIVAFNSFNLEEAPELFVCDDGTYITQAIAARIYGDKSAFFNCGFKGY 203

Query: 181 QDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFFLQIVIGDALLITQWERLK 240
           QDTLWDV+GRH+F+ CYIEGAIDFIFG+GQS+Y+V+SS        +  +++ T      
Sbjct: 204 QDTLWDVQGRHFFQNCYIEGAIDFIFGSGQSVYKVLSSN-------VNVSVIYTIGR--D 263

Query: 241 MQGCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGSGKAFLGRAYGPFSRV 300
              CLI VNV  LP+V+QG+ITAQGR+S  DPSGFVF+ CTITGSGKA LGRAYGPFSRV
Sbjct: 264 FYDCLINVNVASLPQVHQGFITAQGRRSAADPSGFVFKGCTITGSGKALLGRAYGPFSRV 323

Query: 301 IFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSPSKRVSWAMTQGSSQLSGY 343
           IFKD  MG VVAPEGWDAW+FK +E NF+Y+E N  G G+S S RV WA T  +SQL  +
Sbjct: 324 IFKDAIMGPVVAPEGWDAWNFKSKEKNFMYVEENCTGPGASTSMRVPWAKTLDASQLRRF 383

[Close]

BLAST of Cp4.1LG11g08760 vs. NCBI nr
Match: gi|590644768|ref|XP_007031173.1| (Pectinesterase, putative [Theobroma cacao])

HSP 1 Score: 331.6 bits (849), Expect = 1.6e-87
Identity = 172/331 (51.96%), Postives = 212/331 (64.05%), Query Frame = 1


Query: 13  SVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQGGHR 72
           S IVVDKSGKGNF +IQ+AIDS+P NN +W+K+ +NPG Y E V IP  K  I L+G  R
Sbjct: 35  STIVVDKSGKGNFNSIQSAIDSIPSNNAQWIKVRINPGVYTEKVVIPIDKPCIVLEGQDR 94

Query: 73  STTVITFDGHQQTNTSATFNSMADNIIARGITFENSFN-LANAPQLFVQSAETFYTQALA 132
           S T ITF  H +T+ S TF S ADNI+A+GITF+NS+N L    +L  +      +QA+A
Sbjct: 95  SVTTITFYAHDRTDRSCTFTSFADNIVAKGITFKNSYNHLLLLERLSSERPIPGVSQAVA 154

Query: 133 ARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTSFF 192
           ARI GDKSAF  CGF G QDTLWD  GRHYF +C+IEGA+DFIFG GQS+YE        
Sbjct: 155 ARILGDKSAFFQCGFLGLQDTLWDAIGRHYFYQCHIEGAVDFIFGYGQSLYE-------- 214

Query: 193 LQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFVFQQCT 252
                                C I V  G    ++  GYITAQGRQS NDPSGFVF++  
Sbjct: 215 --------------------DCSINVTAGAFSSQIPLGYITAQGRQSSNDPSGFVFKRGE 274

Query: 253 ITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSS 312
           I G+ + +LGRAYGP+SRVIF++T M   V  EGWDAW + G+E NF+Y E N +G GS 
Sbjct: 275 IFGNTQPYLGRAYGPYSRVIFQETTMNAEVVSEGWDAWRYPGKEENFMYAEVNCQGAGSD 334

Query: 313 PSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
            S+RV W      SQL+ +S  SFI+ D WI
Sbjct: 335 TSRRVPWEKKLNPSQLNQFSRSSFIDNDGWI 337

[Close]

BLAST of Cp4.1LG11g08760 vs. NCBI nr
Match: gi|223531256|gb|EEF33099.1| (Pectinesterase-2 precursor, putative [Ricinus communis])

HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85
Identity = 160/333 (48.05%), Postives = 215/333 (64.56%), Query Frame = 1


Query: 10  NIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIYLQG 69
           N+ S + V KSG   FKTIQ AIDS+P +NNKW+KI V+PG Y E V IP +K  I+L+G
Sbjct: 35  NVASTVTVGKSGHEQFKTIQTAIDSIPQSNNKWIKITVSPGVYMEKVNIPEEKPCIFLEG 94

Query: 70  GHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFYTQA 129
             RS + I F+ H++T+TSATF+S+ADN +A GITF+NS+N A      ++  +    QA
Sbjct: 95  SGRSLSTIVFNAHEETDTSATFSSLADNFLATGITFQNSYNRA------LKEEDEKIRQA 154

Query: 130 LAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVISSTS 189
           +AA+++GDKSAF  CGF GFQDTLWD KGRHYF  CYIEGAIDFIFGNGQS Y       
Sbjct: 155 VAAKLFGDKSAFYECGFVGFQDTLWDEKGRHYFYNCYIEGAIDFIFGNGQSFY------- 214

Query: 190 FFLQIVIGDALLITQWERLKMQGCLIYV-NVGLLPEVNQGYITAQGRQSENDPSGFVFQQ 249
                                Q CL+   +  +   V  GYITAQ R S  + +GFVF++
Sbjct: 215 ---------------------QDCLLNATSPAVAGNVEAGYITAQSRGSNTETTGFVFRK 274

Query: 250 CTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTG 309
            +++GS + +LGRAYGP+SRVIF +T    +V+P+GW+AWHF+G++ N VY E + +G G
Sbjct: 275 GSVSGSSQTYLGRAYGPYSRVIFHETTFNAIVSPQGWNAWHFQGRQGNLVYTEIDCKGPG 333

Query: 310 SSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWI 342
           S  SKRV W       ++  +S  SFI++D W+
Sbjct: 335 SDTSKRVPWMKKLDQEEICKFSRSSFIDEDGWL 333

[Close]

BLAST of Cp4.1LG11g08760 vs. NCBI nr
Match: gi|629079157|gb|KCW45891.1| (hypothetical protein EUGRSUZ_L00260 [Eucalyptus grandis])

HSP 1 Score: 324.3 bits (830), Expect = 2.5e-85
Identity = 163/338 (48.22%), Postives = 212/338 (62.72%), Query Frame = 1


Query: 7   LDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPSKKSFIY 66
           +D N  + I VD+ G G+F ++Q AI+SVP  NNKW+ I +NPG Y+EMVTIP  K  I+
Sbjct: 31  MDTNYGNTITVDQHGSGHFTSVQVAINSVPSGNNKWISIRINPGTYKEMVTIPPDKPCIF 90

Query: 67  LQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQSAETFY 126
           LQG  R +T+IT++ H+QT+TSATF S  DNI+ +GITF+NS+N     + + +S E   
Sbjct: 91  LQGKGRDSTIITYNSHEQTDTSATFTSSPDNIVVQGITFKNSYN-----RYWKESNEPPL 150

Query: 127 TQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQSIYEVIS 186
            QALAAR+YGDK  F  CGF G QDTLWDV+GRHY+  CYIEGAIDFIFG+GQSI+E   
Sbjct: 151 VQALAARVYGDKCVFFECGFLGLQDTLWDVQGRHYYGSCYIEGAIDFIFGSGQSIFE--- 210

Query: 187 STSFFLQIVIGDALLITQWERLKMQGCLIYVNVGLLP-EVNQGYITAQGRQSENDPSGFV 246
                                     C + V   L P  +    ITAQGR S  DPSGFV
Sbjct: 211 -------------------------DCTMNVTATLPPYRLQYSCITAQGRASPGDPSGFV 270

Query: 247 FQQCTITGSGKAFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSR 306
           F++  + GSG   LGRAYGP+SRV+F  T +   VAP+GWD WH +G+E N +Y E +  
Sbjct: 271 FERGAVIGSGPYLLGRAYGPYSRVVFHKTLLSAGVAPQGWDPWHCQGREDNIMYAEVDCE 330

Query: 307 GTGSSPSKRVSWAMTQGSSQLSGYSVKSFINQDWWIPN 344
           GTGS  S+RV W      +QL  +S   F++Q+ W+ N
Sbjct: 331 GTGSDTSQRVQWEKHLDKTQLQYFSRSYFLDQEGWLAN 335

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME29_ARATH	2.5e-72	44.24	Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1	[more]
PME55_ARATH	2.1e-71	44.34	Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1	[more]
PME10_ARATH	6.7e-70	43.07	Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1	[more]
PME66_ARATH	8.8e-70	42.09	Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2	[more]
PME52_ARATH	1.7e-57	44.77	Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2	[more]

BLAST of Cp4.1LG11g08760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH00_CUCSA	1.8e-122	63.77	Pectinesterase OS=Cucumis sativus GN=Csa_2G034610 PE=4 SV=1	[more]
A0A061F313_THECC	1.1e-87	51.96	Pectinesterase OS=Theobroma cacao GN=TCM_026775 PE=4 SV=1	[more]
B9STE8_RICCO	7.9e-86	48.05	Pectinesterase OS=Ricinus communis GN=RCOM_1318720 PE=4 SV=1	[more]
A0A058ZWZ8_EUCGR	1.8e-85	48.22	Pectinesterase OS=Eucalyptus grandis GN=EUGRSUZ_L00260 PE=4 SV=1	[more]
B9I6Y8_POPTR	2.6e-84	49.55	Pectinesterase OS=Populus trichocarpa GN=POPTR_0013s00950g PE=4 SV=1	[more]

BLAST of Cp4.1LG11g08760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24130.1	1.4e-73	44.24	Pectin lyase-like superfamily protein	[more]
AT5G18990.1	1.2e-72	44.34	Pectin lyase-like superfamily protein	[more]
AT2G19150.1	3.8e-71	43.07	Pectin lyase-like superfamily protein	[more]
AT2G47280.1	4.9e-71	42.09	Pectin lyase-like superfamily protein	[more]
AT5G26810.1	9.7e-59	44.77	Pectin lyase-like superfamily protein	[more]

BLAST of Cp4.1LG11g08760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205889\|gb\|KGN61008.1\|	2.6e-122	63.77	hypothetical protein Csa_2G034610 [Cucumis sativus]	[more]
gi\|659071556\|ref\|XP_008460603.1\|	1.3e-121	60.59	PREDICTED: probable pectinesterase 66 [Cucumis melo]	[more]
gi\|590644768\|ref\|XP_007031173.1\|	1.6e-87	51.96	Pectinesterase, putative [Theobroma cacao]	[more]
gi\|223531256\|gb\|EEF33099.1\|	1.1e-85	48.05	Pectinesterase-2 precursor, putative [Ricinus communis]	[more]
gi\|629079157\|gb\|KCW45891.1\|	2.5e-85	48.22	hypothetical protein EUGRSUZ_L00260 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08760.1	Cp4.1LG11g08760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 15..183 score: 7.8E-34coord: 210..337 score: 7.9
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 12..185 score: 5.34E-72coord: 220..343 score: 5.34
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 13..190 score: 4.2E-94coord: 224..343 score: 4.2
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 10..183 score: 1.0E-139coord: 212..341 score: 1.0E
None	No IPR available	PANTHER	PTHR31321:SF32	PECTINESTERASE 52-RELATED	coord: 10..183 score: 1.0E-139coord: 212..341 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g08760	Silver-seed gourd	carcpeB0098
Cp4.1LG11g08760	Silver-seed gourd	carcpeB0800
Cp4.1LG11g08760	Cucumber (Chinese Long) v3	cpecucB0100
Cp4.1LG11g08760	Cucumber (Chinese Long) v3	cpecucB0115
Cp4.1LG11g08760	Wax gourd	cpewgoB0124
Cp4.1LG11g08760	Cucurbita pepo (Zucchini)	cpecpeB109
Cp4.1LG11g08760	Cucurbita pepo (Zucchini)	cpecpeB139
Cp4.1LG11g08760	Cucumber (Gy14) v1	cgycpeB0168
Cp4.1LG11g08760	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g08760	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g08760	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g08760	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g08760	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g08760	Cucumber (Chinese Long) v2	cpecuB104
Cp4.1LG11g08760	Bottle gourd (USVL1VR-Ls)	cpelsiB075
Cp4.1LG11g08760	Bottle gourd (USVL1VR-Ls)	cpelsiB095
Cp4.1LG11g08760	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g08760	Watermelon (Charleston Gray)	cpewcgB109
Cp4.1LG11g08760	Watermelon (97103) v1	cpewmB104
Cp4.1LG11g08760	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g08760	Melon (DHL92) v3.5.1	cpemeB084
Cp4.1LG11g08760	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g08760	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g08760	Melon (DHL92) v3.6.1	cpemedB108
Cp4.1LG11g08760	Melon (DHL92) v3.6.1	cpemedB123