Cp4.1LG11g08290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g08290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAutophagy-related protein 18
LocationCp4.1LG11 : 6694147 .. 6697238 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCATTTTCCTTCTTTAGATGGTACCTAACTCAAAATTTTTGGCAGTCATATAGTTTCCGGAGAGGATCATATCCATCAACTATATTTTCATTGTCCTTTGGGCAATGTTCTCAAGTTCCGGAAATTCTGGTGGCAACTAGTTCCTCTGGTTCTGTTCATGTTTTTCCTCTGGGATTTGCTATAAACCAAAGGTGACTGCATCTGTTTTTTCTGTCAGAGATTTAGGAAGGATAAATAATCTTTTTACGCAATGTCGTATGGGTATTTAATCATGCTTGTCGGATTCTTTAATTGACAATCCTTACAGACAGGTTTTAGTTTTAGGTGCATCTGTTCTGCTTCATGGGTACTCGGGTGAACCATCAATATGCATTATTCACCATGTTCCTGATATTTGTATTTCCTAATCTTTCAAACACTGACACACCTTTGATTCTTTCTTTATTACTTCATTCTTTTTTATATTTCATCACAGAACTTTAAGGTAGTCGACAATATATAATTTTTCAGTCTGTTGGATCTTTAATCCGATAATGAAGTGCAAGATAGATTTCCCCATATTTTCTAGGGACTAGAAATTGTTGAAAGAAAAGAAACCGTAATGTCATAGAACGTTGGATGAAAAGAATTGTTAAGTTATGATTACAATTTTCATGCATTGGCAGAAATTCGACTCCTGAAAGCTAATGACGTTTGGGAGGGGTTATGTCAACTAAGAAATGTAGATATGAGCACATTGTAATCAATGTGTACTTAATTATATTATTTTATTTTAAAAATGTATCAACAATTTCATACATCCGTGTAATTTAATTTTTTTAAGTTTTTTTTAAAAATTGTATACTATAATGCATCTCGGCATGTCCATCATGTGTTTGGACATCCCTAACACTTGGGGGAAAAAATTTAGACATCCTATTCTTAGTCCTGTGGGGTGTTCCATGTTTGTGTTTTGTATATATTCAGTGCAGATATTTTTTTCTGTAGTTTCTTGCTTAGTATGCATCTCAACCTACTAAATTAATTCAAAGCCCTTAAGTTTTTCCAATACCAAAATCTTCCCTTTTTCTTTCTGTAAGCTCTTCATGTTATTTCATAAATTTTGTGCTATGGAGATTTCAGGGATGATCTGATTGCCCCTCTGCTGATTAGCTTGATTTTATCTGGTTCCTTTACTGTTGAGGCAGCAGGAGATCAGGTGGCTTTCTTGGATCGATAATGCTCGACTCCATAAGTGATGCACTGGATCCAGCGCACCATCACATTGTGCATAATGCTGTACCAGCAGGAATTAAAAGGTATGACATGTTAATTGAGATAATTTTCTGGTAATATCTAACCATTCTTTCAAGTCAGCAAAGTTCTACGNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAGAATGAATTTGATTGTATCCACGAACTTTTTGATTGTTTAAGCTCATTCAATAACTTTTTTGACACGGAATTTGTAGCCTTCTTTTACAGAATCATCCTAGTGTGCAGAACATTCTTAGCTTTTGCTAAAAAAATTCCAAATTTAGCAACTTTGCTATCAAGTTTATGATNTTTAGCAACTTTGCTATCAAGCTTATGAAGTGTTGTTTTGCAGCTATGCAGTGATACGCAAGGTTGACAGGGTTGCCGATACTTCAAGTTCTGAAATTGTAGCTTGCAGGTGAGTTGTTTATAATTCGTGATCTGCAAGCCTTGAGTGCTCCCCGTTCTACAACTTATCCTTCCATTTTCTTCAAACCTGTTTTCAGATCATGTACAAATGTGCGTTACAAAAGGCCTAACACAAAAAAAATTAATGTTAAGGGAAAAAAAAAACTCCAATCGTTGAGAATAAGAGAAAAGATAACCACAAGGAGAAAGATGGAACTTACTCTAGGAAGATAACCACAAGCAGTTCTCTTATGAGTACGAGAACTCTGTACTTTAAAAATAAGATAACCACAAGCAGTTCGCTAGCAGATATTGTCCTTTTGGACTTTCCCTTTCAGGCTTCTTCTCAAGGTTTTTAAAACGCATCTGCTAAGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTCTCCTCCCCAATCGATGTGGGATCTCACAGTCCACCCCCTTTCAGGGTCCAGCGTCCTTGCCAAACGCTGGCACTTGTTCCCTTCTCCCATTGATGTGGGACCCCCCAATCCACATCCCTTTGGGGCCCAGCATCATTGTTGGCACACTGCCTCGTGTCCACCTCCCTTCGGGGCTCAGCCTCCTCGCTGGCACATTGCCCGGTGTTTGTCTCTGATACCATTTGTAACAGTCCAAGCCCACCACTAGCAAATATTGTCCTCTTTGGACTTTTCCTTTCAGGCTTCCCCTCAAGGTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCAACCCTTATAAAGAATGCTTCATTCTCGATGTGTGTGGGATCTCACAAGGTTACATTATCAAGTCTCAAGGTCAAATGGACGGTACATAATCTCCAAATTTACGAGCTAGTATTCCATCCTCTGACACCTTCTATAGGAAGTCCCACAGGTTCCTTTCCACCTTAGCACCAATGACTAACCAATAAAGAAAATCCTCAATAAAAGACGATTGCCTTTTTGTGAAATGCCAACCTATTTGCATGTAGGTAGTTTCCCTGAAATGAATAGCTTACCTTGTATCCTAGAAACCCTAGGCTTGTTGATTGCTTACAAAAATTGTTTCTGGTCTTTCAAATGAAACCATATTTCAATTGTGATAAGCTCTGAAAATTAAGGTCATTGAGTATTTGAAATCATGATTCAGTAGAATCTGATTTTTGACCCATAAACAAACTCAGAGAAGTAACTTCTAGACAATACTTGTGTTTTCTAGAAATGAGTAAGTTCTTTCTCATTTCATTTTGGATTTTGATACAGGGCCACACTAGCAATCATAACCTACAATGGTTACTTCCAGGAGTACAACTTAAGTCTCAGTAACCAGAACGAGTTCTCGAGAAGTTTGGACTGTGAATTCAATCTCTTGACTGCGATCGCCAATAACGACGTTAGGTTATGA

mRNA sequence

CTTTTCATTTTCCTTCTTTAGATGGTACCTAACTCAAAATTTTTGGCAGTCATATAGTTTCCGGAGAGGATCATATCCATCAACTATATTTTCATTGTCCTTTGGGCAATGTTCTCAAGTTCCGGAAATTCTGGTGGCAACTAGTTCCTCTGGTTCTGTTCATGTTTTTCCTCTGGGATTTGCTATAAACCAAAGGTGACTGCATCTGTTTTTTCTGTCAGAGATTTAGGAAGGATAAATAATCTTTTTACGCAATGTCGTATGGGTATTTAATCATGCTTGTCGGATTCTTTAATTGACAATCCTTACAGACAGGTTTTAGTTTTAGGTGCATCTGTTCTGCTTCATGGGTACTCGGGTGAACCATCAATATGCATTATTCACCATGTTCCTGATATTTGTATTTCCTAATCTTTCAAACACTGACACACCTTTGATTCTTTCTTTATTACTTCATTCTTTTTTATATTTCATCACAGAACTTTAAGGTAGTCGACAATATATAATTTTTCAGTCTGTTGGATCTTTAATCCGATAATGAAGTGCAAGATAGATTTCCCCATATTTTCTAGGGACTAGAAATTGTTGAAAGAAAAGAAACCGTAATGTCATAGAACGTTGGATGAAAAGAATTGTTAAGTTATGATTACAATTTTCATGCATTGGCAGAAATTCGACTCCTGAAAGCTAATGACGTTTGGGAGGGGTTATGTCAACTAAGAAATGTAGATATGAGCACATTGTAATCAATGTGTACTTAATTATATTATTTTATTTTAAAAATGTATCAACAATTTCATACATCCGTGTAATTTAATTTTTTTAAGTTTTTTTTAAAAATTGTATACTATAATGCATCTCGGCATGTCCATCATGTGTTTGGACATCCCTAACACTTGGGGGAAAAAATTTAGACATCCTATTCTTAGTCCTGTGGGGTGTTCCATGTTTGTGTTTTGTATATATTCAGTGCAGATATTTTTTTCTGTAGTTTCTTGCTTAGTATGCATCTCAACCTACTAAATTAATTCAAAGCCCTTAAGTTTTTCCAATACCAAAATCTTCCCTTTTTCTTTCTGTAAGCTCTTCATGTTATTTCATAAATTTTGTGCTATGGAGATTTCAGGGATGATCTGATTGCCCCTCTGCTGATTAGCTTGATTTTATCTGGTTCCTTTACTGTTGAGGCAGCAGGAGATCAGGTGGCTTTCTTGGATCGATAATGCTCGACTCCATAAGTGATGCACTGGATCCAGCGCACCATCACATTGTGCATAATGCTGTACCAGCAGGAATTAAAAGCTATGCAGTGATACGCAAGGTTGACAGGGTTGCCGATACTTCAAGTTCTGAAATTGTAGCTTGCAGGGCCACACTAGCAATCATAACCTACAATGGTTACTTCCAGGAGTACAACTTAAGTCTCAGTAACCAGAACGAGTTCTCGAGAAGTTTGGACTGTGAATTCAATCTCTTGACTGCGATCGCCAATAACGACGTTAGGTTATGA

Coding sequence (CDS)

ATGCTCGACTCCATAAGTGATGCACTGGATCCAGCGCACCATCACATTGTGCATAATGCTGTACCAGCAGGAATTAAAAGCTATGCAGTGATACGCAAGGTTGACAGGGTTGCCGATACTTCAAGTTCTGAAATTGTAGCTTGCAGGGCCACACTAGCAATCATAACCTACAATGGTTACTTCCAGGAGTACAACTTAAGTCTCAGTAACCAGAACGAGTTCTCGAGAAGTTTGGACTGTGAATTCAATCTCTTGACTGCGATCGCCAATAACGACGTTAGGTTATGA

Protein sequence

MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGYFQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL
Homology
[Close]
BLAST of Cp4.1LG11g08290 vs. Swiss-Prot
Match: AT18B_ARATH (Autophagy-related protein 18b OS=Arabidopsis thaliana GN=ATG18B PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 6.4e-23
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 1 

Query: 3   DSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSS-SEIVACRATLAIITYNGYF 62
           DS+SDALDPAHHH++ NAV +GI+SYAV+RK+D++  TSS S   + RAT+++ITYNGYF
Sbjct: 278 DSVSDALDPAHHHVLQNAVSSGIRSYAVVRKIDKLEGTSSPSHFTSLRATVSVITYNGYF 337

Query: 63  QEYNLSLSNQNEFSRSLDCEFNLLT 87
           QEY LS++N+NE   +L+ EFNL +
Sbjct: 338 QEYTLSINNKNESLWTLEREFNLFS 362

[Close]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match: A0A0A0LK48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036700 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-37
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV+D S+SEIVACRATLAIITYNGY
Sbjct: 223 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSDPSTSEIVACRATLAIITYNGY 282

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +NDVRL
Sbjct: 283 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDVRL 317

[Close]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match: M5XM33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007369mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-31
Identity = 67/90 (74.44%), Postives = 83/90 (92.22%), Query Frame = 1 

Query: 4   SISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGYFQE 63
           S++DALDPAHH ++HNA PAG+KSYAVIRKVD+VADTS+SEIVACRAT++IITYNGYFQE
Sbjct: 279 SVTDALDPAHHDVLHNAAPAGVKSYAVIRKVDKVADTSTSEIVACRATISIITYNGYFQE 338

Query: 64  YNLSLSNQNEFSRSLDCEFNLLTAIANNDV 94
           YNLS++NQNEFS SL+ EF LLT I+++ +
Sbjct: 339 YNLSINNQNEFSWSLEREFKLLTVISDDAI 368

[Close]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match: W9SA29_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002140 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-31
Identity = 64/91 (70.33%), Postives = 85/91 (93.41%), Query Frame = 1 

Query: 3   DSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGYFQ 62
           +S+SDALDPAHH ++HNA PAG+KSYAV+RKVDRVAD+S+SEIVACRAT++++TYNGYFQ
Sbjct: 495 ESVSDALDPAHHDVLHNAAPAGVKSYAVVRKVDRVADSSTSEIVACRATISMVTYNGYFQ 554

Query: 63  EYNLSLSNQNEFSRSLDCEFNLLTAIANNDV 94
           EYNL+++N++E+S SL+ EFNLLT IA+N +
Sbjct: 555 EYNLNINNRDEYSWSLEREFNLLTVIADNSI 585

[Close]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match: A0A0B2R7A0_GLYSO (Autophagy-related protein 18 (Fragment) OS=Glycine soja GN=glysoja_042446 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.7e-26
Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 1 

Query: 3   DSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGYFQ 62
           D++ D LDPAHHH++HNAVPAG+KSYAVIRKV+ V ++SSSE++ACRA +++ITYNGYFQ
Sbjct: 142 DAVHDVLDPAHHHVLHNAVPAGVKSYAVIRKVENVTNSSSSELLACRAIMSVITYNGYFQ 201

Query: 63  EYNLSLSNQNEFSRSLDCEFNLLT 87
           EYNLS+   NE S SL  +FNLLT
Sbjct: 202 EYNLSIDAHNELSWSLGRQFNLLT 225

[Close]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match: A0A0D2S0M9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G097500 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.7e-26
Identity = 56/88 (63.64%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 4   SISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGYFQE 63
           S++DALDPAHHH++HNAV AG++SYAV+RKVD+VAD+SSSEI +CRA +++I YNGYFQE
Sbjct: 284 SVNDALDPAHHHVLHNAVSAGVRSYAVVRKVDKVADSSSSEIASCRAIISLIAYNGYFQE 343

Query: 64  YNLSLSNQNEFSRSLDCEFNLLTAIANN 92
           Y  +L++QNE + SL+ EFNL+  I+ N
Sbjct: 344 YTFTLNSQNESTWSLEREFNLVAVISGN 371

[Close]
BLAST of Cp4.1LG11g08290 vs. TAIR10
Match: AT4G30510.1 (AT4G30510.1 homolog of yeast autophagy 18 (ATG18) B)

HSP 1 Score: 107.8 bits (268), Expect = 3.6e-24
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 1 

Query: 3   DSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSS-SEIVACRATLAIITYNGYF 62
           DS+SDALDPAHHH++ NAV +GI+SYAV+RK+D++  TSS S   + RAT+++ITYNGYF
Sbjct: 224 DSVSDALDPAHHHVLQNAVSSGIRSYAVVRKIDKLEGTSSPSHFTSLRATVSVITYNGYF 283

Query: 63  QEYNLSLSNQNEFSRSLDCEFNLLT 87
           QEY LS++N+NE   +L+ EFNL +
Sbjct: 284 QEYTLSINNKNESLWTLEREFNLFS 308

[Close]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match: gi|778667305|ref|XP_011648905.1| (PREDICTED: autophagy-related protein 18b isoform X1 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-37
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV+D S+SEIVACRATLAIITYNGY
Sbjct: 276 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSDPSTSEIVACRATLAIITYNGY 335

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +NDVRL
Sbjct: 336 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDVRL 370

[Close]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match: gi|700205953|gb|KGN61072.1| (hypothetical protein Csa_2G036700 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-37
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV+D S+SEIVACRATLAIITYNGY
Sbjct: 223 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSDPSTSEIVACRATLAIITYNGY 282

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +NDVRL
Sbjct: 283 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDVRL 317

[Close]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match: gi|778667308|ref|XP_011648907.1| (PREDICTED: autophagy-related protein 18b isoform X2 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-37
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV+D S+SEIVACRATLAIITYNGY
Sbjct: 198 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSDPSTSEIVACRATLAIITYNGY 257

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +NDVRL
Sbjct: 258 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDVRL 292

[Close]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match: gi|659069925|ref|XP_008452446.1| (PREDICTED: autophagy-related protein 18b isoform X2 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 6.0e-37
Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV++TSSSEIV+C+ATLAIITYNGY
Sbjct: 212 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSNTSSSEIVSCQATLAIITYNGY 271

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +ND+RL
Sbjct: 272 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDIRL 306

[Close]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match: gi|659069923|ref|XP_008452439.1| (PREDICTED: autophagy-related protein 18b isoform X1 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 6.0e-37
Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1   MLDSISDALDPAHHHIVHNAVPAGIKSYAVIRKVDRVADTSSSEIVACRATLAIITYNGY 60
           M DSISDALDPAHHHIVHNA PAGIKSYAVIRKVDRV++TSSSEIV+C+ATLAIITYNGY
Sbjct: 276 MPDSISDALDPAHHHIVHNAAPAGIKSYAVIRKVDRVSNTSSSEIVSCQATLAIITYNGY 335

Query: 61  FQEYNLSLSNQNEFSRSLDCEFNLLTAIANNDVRL 96
           FQEY LSL+N NEFSRSLD EFNL+T I +ND+RL
Sbjct: 336 FQEYTLSLNNHNEFSRSLDREFNLMTVITDNDIRL 370

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g08290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AT18B_ARATH6.4e-2360.00Autophagy-related protein 18b OS=Arabidopsis thaliana GN=ATG18B PE=2 SV=2[more]
BLAST of Cp4.1LG11g08290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK48_CUCSA1.4e-3786.32Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036700 PE=4 SV=1[more]
M5XM33_PRUPE2.6e-3174.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007369mg PE=4 SV=1[more]
W9SA29_9ROSA2.6e-3170.33Uncharacterized protein OS=Morus notabilis GN=L484_002140 PE=4 SV=1[more]
A0A0B2R7A0_GLYSO5.7e-2667.86Autophagy-related protein 18 (Fragment) OS=Glycine soja GN=glysoja_042446 PE=4 S... [more]
A0A0D2S0M9_GOSRA5.7e-2663.64Uncharacterized protein OS=Gossypium raimondii GN=B456_012G097500 PE=4 SV=1[more]
BLAST of Cp4.1LG11g08290 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30510.13.6e-2460.00 homolog of yeast autophagy 18 (ATG18) B[more]
BLAST of Cp4.1LG11g08290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778667305|ref|XP_011648905.1|2.1e-3786.32PREDICTED: autophagy-related protein 18b isoform X1 [Cucumis sativus][more]
gi|700205953|gb|KGN61072.1|2.1e-3786.32hypothetical protein Csa_2G036700 [Cucumis sativus][more]
gi|778667308|ref|XP_011648907.1|2.1e-3786.32PREDICTED: autophagy-related protein 18b isoform X2 [Cucumis sativus][more]
gi|659069925|ref|XP_008452446.1|6.0e-3784.21PREDICTED: autophagy-related protein 18b isoform X2 [Cucumis melo][more]
gi|659069923|ref|XP_008452439.1|6.0e-3784.21PREDICTED: autophagy-related protein 18b isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g08290.1Cp4.1LG11g08290.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g08290Cucsa.089950Cucumber (Gy14) v1cgycpeB0168
Cp4.1LG11g08290CmaCh05G010160Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g08290CmoCh05G010320Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g08290Bhi06G001196Wax gourdcpewgoB0116
Cp4.1LG11g08290Carg11955Silver-seed gourdcarcpeB0800
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g08290Melon (DHL92) v3.5.1cpemeB099
Cp4.1LG11g08290Cucumber (Gy14) v2cgybcpeB168
Cp4.1LG11g08290Melon (DHL92) v3.6.1cpemedB123
Cp4.1LG11g08290Silver-seed gourdcarcpeB1260
Cp4.1LG11g08290Cucumber (Chinese Long) v3cpecucB0115
Cp4.1LG11g08290Cucurbita pepo (Zucchini)cpecpeB143
Cp4.1LG11g08290Cucurbita maxima (Rimu)cmacpeB176
Cp4.1LG11g08290Cucurbita moschata (Rifu)cmocpeB151
Cp4.1LG11g08290Wild cucumber (PI 183967)cpecpiB100
Cp4.1LG11g08290Cucumber (Chinese Long) v2cpecuB104
Cp4.1LG11g08290Bottle gourd (USVL1VR-Ls)cpelsiB075