Cp4.1LG11g07690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCLAVATA3/ESR (CLE)-related protein 25
LocationCp4.1LG11 : 6146589 .. 6147660 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACTGGGATGATGACGATAACGACGGCAGCTCAATTCGGTGGAATTTCTAAAGAGATGGAGGTGGTCGGTGGTCGTGGTGGCAAGGACGTTGTTCGTTCAGAGTGGCATCTCAACTACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGTACTACGTTGTTTGAACTTTTAGTAAAATTATATATCTTAATCAATTGAGCTACTTCAGTTTAGCTCGTAAAACATGACATGGGTGTTGTCTTACTCAATTGAGCTACTTCAGTTTAGCTTGTAAAGCATGACATGGGTGTTGTCTTACTCAATTGAGCTACTTCAGTTCAGCTTGTAAAACATGACATGGGTGTTGTCTTAATCAATTGAACTATTTCAGTTCAGCTCGTAAAACATGACATGGGTGTTGTCTTACTCAATTGAGCTACTTCAGTTTAGCTCGTAAAACATGATATGGGTGTTGTCTTAATCAATTGAGCTACTTCAGTTTAGCTCGTAAAACATGATATGGGTGTTGTCTTAATCAATTGAGCTACTTCAGTTCAGCTTGTAAAACATGACATGGGTATTGTATGTCTAAAACTTTGTCTTGTTTTTTATTTGCTCAAATCAAGAAAGAGAGGGAGAGATAAAAAAGTTCAAATTTTTCTCACTTTGCCTTTTAAAACTGTTACATTGAGTTCTTTTAGCTTAAAGGGTGTCATTTAAAGTCCTTGGTTGAAGGTGACACAAACATCTTTAAAACCACAGTAAATAAAAGGTGTATATGTGTGTACTTCAATATATTCCATGCCTTTTACTTAATCAATATCTCTTTATCCATTACTAATACTCGTTCTTAAGTTTTGAGTATCCGTTCAATAGTCGATGATTCAGCTCCGTTCTACAATTGTTAACCTCTCGAAAATCGAAAAACCACTCAAGACTTGAACTTTTTTTGGTTTTTCGTTTTGTAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAA

mRNA sequence

ATGGCTGTTATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACTGGGATGATGACGATAACGACGGCAGCTCAATTCGGTGGAATTTCTAAAGAGATGGAGGTGGTCGGTGGTCGTGGTGGCAAGGACGTTGTTCGTTCAGAGTGGCATCTCAACTACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAA

Coding sequence (CDS)

ATGGCTGTTATGGGGTTTATTTGGCTTTTGTTAGTGAATGGTTCCCATCAACGGGGACAATCGGTGGCAACTGGGATGATGACGATAACGACGGCAGCTCAATTCGGTGGAATTTCTAAAGAGATGGAGGTGGTCGGTGGTCGTGGTGGCAAGGACGTTGTTCGTTCAGAGTGGCATCTCAACTACATGAGTAAAAGAAGAGTTCCTAATGGCCCTGATCCTATTCATAACAGGAGAGCAGGAAACTCTGGAAGACCACCCGGCAAGGCTTAA

Protein sequence

MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Homology
[Close]
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match: A0A0A0KJ25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G402550 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.0e-26
Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVV--GGRGGKDVVRSEW 60
           + +M FIWLLL NGS QR + V  G +T  T  +  GISKE  V   GGRGGK V   EW
Sbjct: 13  LLLMAFIWLLLANGSCQRKEPVVVGKVTTATGDEISGISKETTVAVGGGRGGKVVDHPEW 72

Query: 61  HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 73  HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 104

[Close]
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match: M5XZR3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013780mg PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.0e-13
Identity = 50/90 (55.56%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           +AVMGFI +LLV     +G    T   T T AA      K  +VVG      +V  E  L
Sbjct: 18  LAVMGFICVLLVGTLETQGGLTKTA--TSTAAAPESFSEKPADVVGREN--KLVHPELDL 77

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAG+SGRPPG+A
Sbjct: 78  NYMSKRRVPNGPDPIHNRRAGSSGRPPGQA 103

[Close]
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match: I1J5H3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G038900 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-11
Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           + VMG + LL++        S+ +G  TI    Q+     + E V GR  K V R+E   
Sbjct: 27  LLVMGLVSLLVLG-------SLGSGEGTIHPTTQWSQERVKHERVVGRD-KPVDRAELDF 86

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNSGRPPG+A
Sbjct: 87  NYMSKRRVPNGPDPIHNRRAGNSGRPPGQA 108

[Close]
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match: A0A0B2P0A0_GLYSO (CLAVATA3/ESR (CLE)-related protein 25 OS=Glycine soja GN=glysoja_008044 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-11
Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           + VMG + LL++        S+ +G  TI    Q+     + E V GR  K V R+E   
Sbjct: 27  LLVMGLVSLLVLG-------SLGSGEGTIHPTTQWSQERVKHERVVGRD-KPVDRAELDF 86

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNSGRPPG+A
Sbjct: 87  NYMSKRRVPNGPDPIHNRRAGNSGRPPGQA 108

[Close]
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match: D7TNI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01090 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-11
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           +A +G +WLLL  G  + G +  T M+    + +     K M+V+     + V+R +  L
Sbjct: 22  LAFVGCVWLLLGGGILESGGAKTTSMLAAHYSLEN---LKHMKVIDRE--RLVIRRQLDL 81

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNS +PPG++
Sbjct: 82  NYMSKRRVPNGPDPIHNRRAGNSRQPPGQS 106

[Close]
BLAST of Cp4.1LG11g07690 vs. TAIR10
Match: AT3G28455.1 (AT3G28455.1 CLAVATA3/ESR-RELATED 25)

HSP 1 Score: 47.4 bits (111), Expect = 5.5e-06
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 1 

Query: 50 GKDVVRSEWHLNYMSKRRVPNGPDPIHNRRAGNSGRPP 88
          GKDV     +L ++SKR+VPNGPDPIHNR+A  S RPP
Sbjct: 47 GKDV-----NLFHVSKRKVPNGPDPIHNRKAETSRRPP 79

[Close]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match: gi|449458047|ref|XP_004146759.1| (PREDICTED: uncharacterized protein LOC101209880 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-25
Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVV--GGRGGKDVVRSEW 60
           + +M FIWLLL NGS QR + V  G +T  T  +  GISKE  V   GGRGGK V   EW
Sbjct: 13  LLLMAFIWLLLANGSCQRKEPVVVGKVTTATGDEISGISKETTVAVGGGRGGKVVDHPEW 72

Query: 61  HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 73  HLNYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 104

[Close]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match: gi|659129692|ref|XP_008464794.1| (PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-23
Identity = 59/90 (65.56%), Postives = 65/90 (72.22%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           + VM FIWLLL NGS QR + V  G +T     +F G+ K+  VV G GGK     EWHL
Sbjct: 15  LLVMAFIWLLLANGSCQRKEPVVVGKVTTAMGDEFSGVFKKTTVVVG-GGKVADHPEWHL 74

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA
Sbjct: 75  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 103

[Close]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match: gi|645229493|ref|XP_008221492.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Prunus mume])

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-14
Identity = 50/90 (55.56%), Postives = 56/90 (62.22%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           +AVMGFI +LLV     +G S  T      T   F    K  +VVG      +V  E  L
Sbjct: 18  LAVMGFICVLLVGTLETQGGSTKTATSKAATPESFS--EKPADVVGREN--KLVHPELDL 77

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNSGRPPG+A
Sbjct: 78  NYMSKRRVPNGPDPIHNRRAGNSGRPPGQA 103

[Close]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match: gi|1009153815|ref|XP_015894831.1| (PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Ziziphus jujuba])

HSP 1 Score: 85.1 bits (209), Expect = 6.8e-14
Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           +AV+GFIW+LLV     +  S           A+  G  K+ +VVG    + +VR +  +
Sbjct: 25  LAVVGFIWILLVGTGDTKSASFV---------AESAGNIKDSDVVGR---EKLVRPQLDI 84

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAGNSGRPPG+A
Sbjct: 85  NYMSKRRVPNGPDPIHNRRAGNSGRPPGQA 102

[Close]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match: gi|596197970|ref|XP_007223616.1| (hypothetical protein PRUPE_ppa013780mg [Prunus persica])

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-13
Identity = 50/90 (55.56%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 1   MAVMGFIWLLLVNGSHQRGQSVATGMMTITTAAQFGGISKEMEVVGGRGGKDVVRSEWHL 60
           +AVMGFI +LLV     +G    T   T T AA      K  +VVG      +V  E  L
Sbjct: 18  LAVMGFICVLLVGTLETQGGLTKTA--TSTAAAPESFSEKPADVVGREN--KLVHPELDL 77

Query: 61  NYMSKRRVPNGPDPIHNRRAGNSGRPPGKA 91
           NYMSKRRVPNGPDPIHNRRAG+SGRPPG+A
Sbjct: 78  NYMSKRRVPNGPDPIHNRRAGSSGRPPGQA 103

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ25_CUCSA7.0e-2668.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G402550 PE=4 SV=1[more]
M5XZR3_PRUPE4.0e-1355.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013780mg PE=4 SV=1[more]
I1J5H3_SOYBN2.9e-1152.22Uncharacterized protein OS=Glycine max GN=GLYMA_01G038900 PE=4 SV=1[more]
A0A0B2P0A0_GLYSO2.9e-1152.22CLAVATA3/ESR (CLE)-related protein 25 OS=Glycine soja GN=glysoja_008044 PE=4 SV=... [more]
D7TNI7_VITVI4.9e-1146.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01090 PE=4 SV=... [more]
BLAST of Cp4.1LG11g07690 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G28455.15.5e-0663.16 CLAVATA3/ESR-RELATED 25[more]
BLAST of Cp4.1LG11g07690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458047|ref|XP_004146759.1|1.0e-2568.48PREDICTED: uncharacterized protein LOC101209880 [Cucumis sativus][more]
gi|659129692|ref|XP_008464794.1|2.7e-2365.56PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo][more]
gi|645229493|ref|XP_008221492.1|5.2e-1455.56PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Prunus mume][more]
gi|1009153815|ref|XP_015894831.1|6.8e-1452.22PREDICTED: CLAVATA3/ESR (CLE)-related protein 25 [Ziziphus jujuba][more]
gi|596197970|ref|XP_007223616.1|5.7e-1355.56hypothetical protein PRUPE_ppa013780mg [Prunus persica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07690.1Cp4.1LG11g07690.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07690CmaCh05G009510Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07690CmoCh05G009700Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g07690Cla021904Watermelon (97103) v1cpewmB100
Cp4.1LG11g07690Csa6G402550Cucumber (Chinese Long) v2cpecuB121
Cp4.1LG11g07690MELO3C026507Melon (DHL92) v3.5.1cpemeB090
Cp4.1LG11g07690ClCG08G009090Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07690CSPI06G21030Wild cucumber (PI 183967)cpecpiB119
Cp4.1LG11g07690MELO3C026507.2Melon (DHL92) v3.6.1cpemedB113
Cp4.1LG11g07690CsaV3_6G036050Cucumber (Chinese Long) v3cpecucB0135
Cp4.1LG11g07690Bhi04G000997Wax gourdcpewgoB0140
Cp4.1LG11g07690CsGy6G020320Cucumber (Gy14) v2cgybcpeB717
Cp4.1LG11g07690Carg21903Silver-seed gourdcarcpeB0297
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07690Bottle gourd (USVL1VR-Ls)cpelsiB099
Cp4.1LG11g07690Silver-seed gourdcarcpeB0191
Cp4.1LG11g07690Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07690Cucumber (Gy14) v1cgycpeB0088
Cp4.1LG11g07690Cucurbita maxima (Rimu)cmacpeB181
Cp4.1LG11g07690Cucurbita moschata (Rifu)cmocpeB155