Cp4.1LG11g07460 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07460
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG11 : 5784279 .. 5784575 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAGGGCCAAGCACAGGTTCACCATGTCATTATTATTTGTTTAAATGGTTCATGATAGATATGAGTACATGGAGTGATGGGTAACATAGTTATTAATGTGATTATGTAGGAGAAGGCGAGTAATGTGATGGATAGGGCGAGTGATGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

mRNA sequence

ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAGGGCCAAGCACAGGAGAAGGCGAGTAATGTGATGGATAGGGCGAGTGATGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

Coding sequence (CDS)

ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAGGGCCAAGCACAGGAGAAGGCGAGTAATGTGATGGATAGGGCGAGTGATGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

Protein sequence

MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVKDASGMKK
Homology
[Close]
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match: A0A0A0KPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-18
Identity = 53/67 (79.10%), Postives = 63/67 (94.03%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+SQ++SYQ+GEAKGQAQEKASN+M++ASDAAQS KES+QE GQQM+AKAQGA DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match: A0A0A0KRE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.4e-17
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+S+ +SY +GEAKGQAQEKASN+MD+A D AQS KES+QEAGQQM+AKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match: A0A0A0KVV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-15
Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQ +SYQ GEAKGQ +EKASN+MD A++AAQS KE++QEAGQQ+ AKAQGA +A+K
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match: A0A061EH65_THECC (Late embryogenesis abundant protein family protein OS=Theobroma cacao GN=TCM_019635 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+SQS+SY+ GEAKGQAQEKASN+MD+A+DAAQS KES+QE GQ+M  KA GA +AVK
Sbjct: 1  MADNSQSMSYKAGEAKGQAQEKASNLMDKAADAAQSAKESMQETGQKMMEKAHGAKEAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match: B9H3T9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s10750g PE=4 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-15
Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD++Q +SYQ GE KGQAQEKASN+MDRA +AAQS KES+QEAGQQ++AK QGAV+ VK
Sbjct: 1  MADNTQKMSYQAGETKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVRAKTQGAVEGVK 60

Query: 61 DASGMKK 68
          +A+GM K
Sbjct: 61 NATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TAIR10
Match: AT5G38760.1 (AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 78.2 bits (191), Expect = 2.2e-15
Identity = 42/67 (62.69%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          M+ +SQ++S+Q G+AKGQ QEKAS +MD+AS+AAQS KESL+E GQQ++ KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DASGMKK 68
          +A+GM K
Sbjct: 61 NATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TAIR10
Match: AT5G53820.1 (AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-14
Identity = 39/67 (58.21%), Postives = 57/67 (85.07%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          M+++SQS+S+  G+AKGQ QEKASN++D+AS+AAQS KES+QE GQQ++ KAQGA + +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DASGMKK 68
          + +G+ K
Sbjct: 61 EKTGISK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. TAIR10
Match: AT3G02480.1 (AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 70.1 bits (170), Expect = 5.9e-13
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 1 

Query: 3  DSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVKDA 62
          D+ Q+ SYQ G+A GQ +EKA  +MD+A DAA S ++SLQ+ GQQM+ KAQGA D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 SGMKK 68
          +GM K
Sbjct: 62 TGMNK 66

[Close]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match: gi|449469355|ref|XP_004152386.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 4.4e-18
Identity = 53/67 (79.10%), Postives = 63/67 (94.03%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+SQ++SYQ+GEAKGQAQEKASN+M++ASDAAQS KES+QE GQQM+AKAQGA DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match: gi|659073373|ref|XP_008437025.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 5.7e-18
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+SQ +SY VGEAKGQAQEKASN+MD+ASD AQS KES+QEAGQQM+AKAQGA DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match: gi|659119050|ref|XP_008459448.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-17
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQ +SYQ GEAKGQA+EKASN+MD+AS+AAQS KE++QEAGQQM AKAQGA DA+K
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match: gi|449469357|ref|XP_004152387.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-17
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+S+ +SY +GEAKGQAQEKASN+MD+A D AQS KES+QEAGQQM+AKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DASGMKK 68
          DA+GM K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match: gi|1009127017|ref|XP_015880470.1| (PREDICTED: stress-induced protein KIN2-like [Ziziphus jujuba])

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-16
Identity = 51/66 (77.27%), Postives = 60/66 (90.91%), Query Frame = 1 

Query: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MAD+SQ +SY  GEAKG+AQEKA N+MD+AS+AAQS KES+QEAGQQM+AKAQGA DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGRAQEKAGNMMDKASNAAQSAKESVQEAGQQMKAKAQGAADAVK 60

Query: 61 DASGMK 67
          DA+GMK
Sbjct: 61 DATGMK 66

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPD4_CUCSA3.1e-1879.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1[more]
A0A0A0KRE1_CUCSA3.4e-1776.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1[more]
A0A0A0KVV6_CUCSA1.4e-1571.64Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1[more]
A0A061EH65_THECC1.9e-1573.13Late embryogenesis abundant protein family protein OS=Theobroma cacao GN=TCM_019... [more]
B9H3T9_POPTR4.1e-1571.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s10750g PE=4 SV=2[more]
BLAST of Cp4.1LG11g07460 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38760.12.2e-1562.69 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G53820.11.8e-1458.21 Late embryogenesis abundant protein (LEA) family protein[more]
AT3G02480.15.9e-1358.46 Late embryogenesis abundant protein (LEA) family protein[more]
BLAST of Cp4.1LG11g07460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469355|ref|XP_004152386.1|4.4e-1879.10PREDICTED: stress-induced protein KIN2-like [Cucumis sativus][more]
gi|659073373|ref|XP_008437025.1|5.7e-1880.60PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|659119050|ref|XP_008459448.1|2.2e-1777.61PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|449469357|ref|XP_004152387.1|4.9e-1776.12PREDICTED: stress-induced protein KIN2-like [Cucumis sativus][more]
gi|1009127017|ref|XP_015880470.1|1.8e-1677.27PREDICTED: stress-induced protein KIN2-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07460.1Cp4.1LG11g07460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 27..47
scor
NoneNo IPR availableGENE3DG3DSA:1.10.287.1060coord: 15..53
score: 5.
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 2..67
score: 3.2
NoneNo IPR availablePANTHERPTHR34191:SF2STRESS-INDUCED PROTEIN KIN1-RELATEDcoord: 2..67
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07460CmaCh05G009200Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07460CmoCh05G009230Cucurbita moschata (Rifu)cmocpeB721
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07460Silver-seed gourdcarcpeB0191
Cp4.1LG11g07460Silver-seed gourdcarcpeB1477
Cp4.1LG11g07460Cucumber (Chinese Long) v3cpecucB0129
Cp4.1LG11g07460Wax gourdcpewgoB0129
Cp4.1LG11g07460Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07460Cucumber (Gy14) v1cgycpeB0723
Cp4.1LG11g07460Cucurbita maxima (Rimu)cmacpeB181
Cp4.1LG11g07460Cucurbita moschata (Rifu)cmocpeB155
Cp4.1LG11g07460Cucurbita moschata (Rifu)cmocpeB726
Cp4.1LG11g07460Wild cucumber (PI 183967)cpecpiB115
Cp4.1LG11g07460Cucumber (Chinese Long) v2cpecuB117
Cp4.1LG11g07460Bottle gourd (USVL1VR-Ls)cpelsiB084
Cp4.1LG11g07460Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07460Melon (DHL92) v3.5.1cpemeB078
Cp4.1LG11g07460Cucumber (Gy14) v2cgybcpeB593
Cp4.1LG11g07460Melon (DHL92) v3.6.1cpemedB100