Cp4.1LG11g07440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG11 : 5810077 .. 5810386 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAGCTCTCAAAGTCTGAGCTACCAAATTGGAGAAGCTAAAGGCCAAGCACAGGTTCACTTTGCCTCTATTTTCTAAAATGATTCATGACTCATAATCATATGACCAAATATAAGATTAAGGAGTAATTGGTAACGTATTTATGGATGTGATTATGTAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATGCAGCCCAATCAACCAAGGAATCAATACAAGAGGCAGGACAACAGATACAAGCCAAAGCGCAAGGTGCAGTTGATGCTGTCAAAGATGCCATTGACACGAAGAAATGA

mRNA sequence

ATGGCAGACAGCTCTCAAAGTCTGAGCTACCAAATTGGAGAAGCTAAAGGCCAAGCACAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATGCAGCCCAATCAACCAAGGAATCAATACAAGAGGCAGGACAACAGATACAAGCCAAAGCGCAAGGTGCAGTTGATGCTGTCAAAGATGCCATTGACACGAAGAAATGA

Coding sequence (CDS)

ATGGCAGACAGCTCTCAAAGTCTGAGCTACCAAATTGGAGAAGCTAAAGGCCAAGCACAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATGCAGCCCAATCAACCAAGGAATCAATACAAGAGGCAGGACAACAGATACAAGCCAAAGCGCAAGGTGCAGTTGATGCTGTCAAAGATGCCATTGACACGAAGAAATGA

Protein sequence

MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVKDAIDTKK
Homology
[Close]
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match: A0A0A0KPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-17
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQ++SYQIGEAKGQAQEKASN+M+KASDAAQS KESIQE GQQ++AKAQGA DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match: A0A0A0KRE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.7e-16
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+S+ +SY IGEAKGQAQEKASNLMDKA D AQS KES+QEAGQQ++AKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match: A0A0A0KXN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-15
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQ +SY  GEAKGQ QEK SN+MDKASDAAQS KES+QE GQQ+ AKAQGA DAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVK 60

Query: 61 DAID 65
          DA++
Sbjct: 61 DAVN 64

[Close]
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match: A0A0A0KVV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-15
Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MADSSQ +SYQ GEAKGQ +EKASNLMD A++AAQS KE+IQEAGQQ+ AKAQGA +A+K
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match: A0A061EH65_THECC (Late embryogenesis abundant protein family protein OS=Theobroma cacao GN=TCM_019635 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.5e-14
Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQS+SY+ GEAKGQAQEKASNLMDKA+DAAQS KES+QE GQ++  KA GA +AVK
Sbjct: 1  MADNSQSMSYKAGEAKGQAQEKASNLMDKAADAAQSAKESMQETGQKMMEKAHGAKEAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TAIR10
Match: AT5G38760.1 (AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-14
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          M+ +SQ++S+Q G+AKGQ QEKAS +MDKAS+AAQS KES++E GQQI+ KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DAIDTKK 68
          +A    K
Sbjct: 61 NATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TAIR10
Match: AT5G53820.1 (AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-14
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          M+++SQS+S+  G+AKGQ QEKASNL+DKAS+AAQS KESIQE GQQ++ KAQGA + +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DAIDTKK 68
          +     K
Sbjct: 61 EKTGISK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. TAIR10
Match: AT3G02480.1 (AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 64.7 bits (156), Expect = 2.5e-11
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 1 

Query: 3  DSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVKDA 62
          D+ Q+ SYQ G+A GQ +EKA  +MDKA DAA S ++S+Q+ GQQ++ KAQGA D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 IDTKK 68
              K
Sbjct: 62 TGMNK 66

[Close]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match: gi|449469355|ref|XP_004152386.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 3.7e-17
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQ++SYQIGEAKGQAQEKASN+M+KASDAAQS KESIQE GQQ++AKAQGA DAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match: gi|659119050|ref|XP_008459448.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-16
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MADSSQ +SYQ GEAKGQA+EKASNLMDKAS+AAQS KE+IQEAGQQ+ AKAQGA DA+K
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match: gi|659073373|ref|XP_008437025.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-16
Identity = 51/67 (76.12%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQ +SY +GEAKGQAQEKASN+MDKASD AQS KES+QEAGQQ++AKAQGA DAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match: gi|449469357|ref|XP_004152387.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-16
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+S+ +SY IGEAKGQAQEKASNLMDKA D AQS KES+QEAGQQ++AKAQGA DAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

[Close]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match: gi|659073371|ref|XP_008437024.1| (PREDICTED: stress-induced protein KIN2-like [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-15
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1 

Query: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60
          MAD+SQ +S+QIGEAKGQAQEKASNLMDKA DA QS KES+QEAGQQ++AKA+ A DAVK
Sbjct: 1  MADNSQKMSHQIGEAKGQAQEKASNLMDKAGDATQSAKESVQEAGQQMRAKAEDAADAVK 60

Query: 61 DAIDTKK 68
          DA    K
Sbjct: 61 DATGMNK 67

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g07440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPD4_CUCSA2.6e-1779.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165870 PE=4 SV=1[more]
A0A0A0KRE1_CUCSA3.7e-1676.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165860 PE=4 SV=1[more]
A0A0A0KXN2_CUCSA1.4e-1575.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643250 PE=4 SV=1[more]
A0A0A0KVV6_CUCSA5.4e-1571.64Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643260 PE=4 SV=1[more]
A0A061EH65_THECC3.5e-1471.64Late embryogenesis abundant protein family protein OS=Theobroma cacao GN=TCM_019... [more]
BLAST of Cp4.1LG11g07440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38760.11.4e-1461.19 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G53820.11.8e-1461.19 Late embryogenesis abundant protein (LEA) family protein[more]
AT3G02480.12.5e-1153.85 Late embryogenesis abundant protein (LEA) family protein[more]
BLAST of Cp4.1LG11g07440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469355|ref|XP_004152386.1|3.7e-1779.10PREDICTED: stress-induced protein KIN2-like [Cucumis sativus][more]
gi|659119050|ref|XP_008459448.1|1.8e-1677.61PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|659073373|ref|XP_008437025.1|1.8e-1676.12PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
gi|449469357|ref|XP_004152387.1|5.4e-1676.12PREDICTED: stress-induced protein KIN2-like [Cucumis sativus][more]
gi|659073371|ref|XP_008437024.1|2.0e-1574.63PREDICTED: stress-induced protein KIN2-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07440.1Cp4.1LG11g07440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 27..47
scor
NoneNo IPR availablePANTHERPTHR34191FAMILY NOT NAMEDcoord: 2..62
score: 4.6
NoneNo IPR availablePANTHERPTHR34191:SF2STRESS-INDUCED PROTEIN KIN1-RELATEDcoord: 2..62
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07440Wax gourdcpewgoB0129
Cp4.1LG11g07440Cucurbita pepo (Zucchini)cpecpeB149
Cp4.1LG11g07440Cucumber (Gy14) v1cgycpeB0723
Cp4.1LG11g07440Cucurbita maxima (Rimu)cmacpeB181
Cp4.1LG11g07440Cucurbita maxima (Rimu)cmacpeB767
Cp4.1LG11g07440Cucurbita moschata (Rifu)cmocpeB155
Cp4.1LG11g07440Cucurbita moschata (Rifu)cmocpeB721
Cp4.1LG11g07440Cucurbita moschata (Rifu)cmocpeB726
Cp4.1LG11g07440Wild cucumber (PI 183967)cpecpiB115
Cp4.1LG11g07440Cucumber (Chinese Long) v2cpecuB117
Cp4.1LG11g07440Bottle gourd (USVL1VR-Ls)cpelsiB084
Cp4.1LG11g07440Watermelon (Charleston Gray)cpewcgB123
Cp4.1LG11g07440Melon (DHL92) v3.5.1cpemeB078
Cp4.1LG11g07440Cucumber (Gy14) v2cgybcpeB593
Cp4.1LG11g07440Melon (DHL92) v3.6.1cpemedB100
Cp4.1LG11g07440Silver-seed gourdcarcpeB0191
Cp4.1LG11g07440Silver-seed gourdcarcpeB1477
Cp4.1LG11g07440Cucumber (Chinese Long) v3cpecucB0129