Cp4.1LG11g07280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g07280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase
LocationCp4.1LG11 : 4961005 .. 4964401 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGTGTGTTTGGCTTAGTTCTTACTGTTTAATCTGCTCCTCGTTTAATGTGTTTACATAATTGTGGAGTTGAAGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGGTTCGCGTCTCTTATATTTTTTTAATTTTGGTTTACCATGCTTTCCCAATCCAAATTGGCTGATGCTAGAACACAAATGTTGGATTTATTAGGGTTTTTAGAAGGAGAAATGTGTTAATTCTTTTGAAAATATATTAGGGTTTTTAGGAAGGAGAAATGCGCCTCTGGTCTCTAGATCAGTATGGTGCTTTCATCTTGAAGAGGAGTCTTTCTGGTTCTCTATAAATATCAGTAAATGATCGATTACAACATTAGTTCTTCATGAACTTTTCAGGAACCCAACTTCTGAGTACGACTTTGAATGTAAAAGAATATGTNTAGTCCTGCTCTTCTAGAATTATTTTCCTGTTGACATCGATCTTCTGTATGTCCCCTTCTATCACTAAATTTACAGTGAAACTTAAAGAAATCGATAGTCATCAATTGTATGATCACTTTTATTGCAATGTTCACATGATTTATCCTTGGCGAATTTTGAATATGTTGTTTTCTTCTGCACTGCTGATGCAATCAAGAAATTCTTAGTAGGTTCAGAAGTTACCTGACGCGGCATCTTCTTGTACAAGTAATGAATAGGCTTGCCTCACATTAGGTAATGGAGTCATCATCAATATGTTAGATCTCACCGTTTTATAAGAATCATTGAGCCCCATGAGTAGTTGCATCAACTTGTCTTCTTCACGTTGATCAACATGTATTTGACGTTGATTACAGGTAAATGGTGTGCGGTATGCTTCCAATTCATCCCAGAGTGCTTTGAGCTTTGTGAAATATACTAACAGTGTCATGGTTCCCTGTGACATCATTGCTATAGACTTTTGTATTTGAAAAATTGCTGGAGCATTCTTTTGTGAGAATTGATCGTGATGATCAACCCACACTTGATGAGCTGTCTTGGCATGAATAATACCTTCAACGATATCTGCTTCAACTGAATGAGTTAACCAAGATATTATCATACGGTTGCACTGATTCCAAGGTTCAAATTCGATTGAATTTGCATCTTGAGACGGTTCTTCAATTGTGCCATCAATGAAGCCAATTTTCTTTTTGGCAATAAGAGCATGCATAACTGATTTACTCGAACATTGATAATTTGTTCCATTTAATTTGATTGGAACAAGTGAATATCTGACACGTTATCACATTTTCATATATTTTAAATTATAAAATTTTAGTATTAAGTGGCACTCAATAAATGGTTAAATCATTACATTAATGTATTTTAAATCTATATTGAGAGTTGAGCGCATGTTCCATCACTCCCAATTTTGAGACCTTTCATCCACAATCATATCTAAATATCTCATAATATCATCTGAACTCTATCCATCCACAATTTTCAAATTTTTATCCACTACTGCAATGGTTTACTGGAAGCTTCAATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGTGTGTTTGGCTTAGTTCTTACTGTTTAATCTGCTCCTCGTTTAATGTGTTTACATAATTGTGGAGTTGAAGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGGTTCGCGTCTCTTATATTTTTTTAATTTTGGTTTACCATGCTTTCCCAATCCAAATTGGCTGATGCTAGAACACAAATGTTGGATTTATTAGGGTTTTTAGAAGGAGAAATGTGTTAATTCTTTTGAAAATATATTAGGGTTTTTAGGAAGGAGAAATGCGCCTCTGGTCTCTAGATCAGTATGGTGCTTTCATCTTGAAGAGGAGTCTTTCTGGTTCTCTATAAATATCAGTAAATGATCGATTACAACATTAGTTCTTCATGAACTTTTCAGGAACCCAACTTCTGAGTACGACTTTGAATGTAAAAGAATATGTTAAGAGCGAATTTCTTAAGGTTGAAGAACAGATATTGCGCCGCCACAACGATCTATTTCCTTCTCCAGTTACACTGGATGACTTCTTTTGGGCTTTTGGGATACTCAGATCAAGGGCATTTTCACGACTCAGAGGCCAAAACCTTGTTTTGATTCCTTTTGCTGACTTGGTTAGATCTCAAACTCTTACTTATCTGCTGTTCTAAGTGTTTTTTTTAATTAGATTTCTCTTTCCTATATTCTACAAGAACACCATAACTCAATGATTTCTTATCTGCTGCACGAATTAGTCTATTTTTTAGTTAGATTTTAACTCCCCTCAAACACAATTCATAATTAATCAGGTCAACCATAGCGTTAGCGTAACCTCAGAAGAATATGCATGCGAGGTTAAGGCACCGGCAGGCCTCTTCTCATGGGATGTCCTATTCTCTCTCCGGTCCCCAACTTCTGTTAAGGCTGGCGAGCAGGTGAAGTACTAA

mRNA sequence

ATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGCTTCAATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGGAACCCAACTTCTGAGTACGACTTTGAATGTAAAAGAATATGTTAAGAGCGAATTTCTTAAGGTTGAAGAACAGATATTGCGCCGCCACAACGATCTATTTCCTTCTCCAGTTACACTGGATGACTTCTTTTGGGCTTTTGGGATACTCAGATCAAGGGCATTTTCACGACTCAGAGGCCAAAACCTTGTTTTGATTCCTTTTGCTGACTTGGTCAACCATAGCGTTAGCGTAACCTCAGAAGAATATGCATGCGAGGTTAAGGCACCGGCAGGCCTCTTCTCATGGGATGTCCTATTCTCTCTCCGGTCCCCAACTTCTGTTAAGGCTGGCGAGCAGGTGAAGTACTAA

Coding sequence (CDS)

ATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGCTTCAATGGCGACTCCAATGGCGTTAGCTTCTTCATCCTCTAATTTCCTTTCCCTTCCGCGCACTGCAACGCACCTTTCGTTCTCGCCAAAGTCGCCGGTGCTCTATCCCAAGCCATGCTTCTCTATATCTTCCCTCGCCTCTCCGGATTTAGACCCATCGTTACCCTCAAACGTTCACACCTTCTGGCAATGGCTTCGCCAGGAAGGCATGGTCTCCTCCAAGACTCACGTGAAGCCGGCAATTTTCCCTCAAGGCCTCGGACTGGCTACAACCAAAGACCTGTCCAAGAACGAGGTCGTTTTGGAGGTTCCCAAACGATTCTGGATAAATCCTGACGCGGTTACTCATTCCGAGATTGGAAATGCGTGCAGTGGATTGAAGCCATGGGTTTCTGTTGCTCTGTTTCTGATTAGAGAAAATTTGAAGGACGACTCGCGTTGGCGACGGTACCTCGATATTCTCCCGCCACAAACGGATTCGACTGTGTTTTGGCGGATGTTTCAGTGCAGGTCTGAAGAGGAGCTTGCAGAGCTCCAAGGAACCCAACTTCTGAGTACGACTTTGAATGTAAAAGAATATGTTAAGAGCGAATTTCTTAAGGTTGAAGAACAGATATTGCGCCGCCACAACGATCTATTTCCTTCTCCAGTTACACTGGATGACTTCTTTTGGGCTTTTGGGATACTCAGATCAAGGGCATTTTCACGACTCAGAGGCCAAAACCTTGTTTTGATTCCTTTTGCTGACTTGGTCAACCATAGCGTTAGCGTAACCTCAGAAGAATATGCATGCGAGGTTAAGGCACCGGCAGGCCTCTTCTCATGGGATGTCCTATTCTCTCTCCGGTCCCCAACTTCTGTTAAGGCTGGCGAGCAGGTGAAGTACTAA

Protein sequence

MATPMALASSSSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQASMATPMALASSSSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQVKY
Homology
[Close]
BLAST of Cp4.1LG11g07280 vs. Swiss-Prot
Match: RBCMT_TOBAC (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum GN=RBCMT PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.0e-100
Identity = 172/282 (60.99%), Postives = 221/282 (78.37%), Query Frame = 1 

Query: 191 SSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMV 250
           SS+FL   +T    +   ++   Y K    I+SL   +LDP +P  V TFWQWL +EG+V
Sbjct: 12  SSSFLCPLKTTKSRTKHHQTFYTYQKTIL-INSLQLTELDPKIPQPVQTFWQWLCKEGVV 71

Query: 251 SSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVS 310
           ++KT VKP I P+GLGL   +D++K E VL+VPKRFWINPDAV  SEIGN CSGLKPW+S
Sbjct: 72  TTKTPVKPGIVPEGLGLVAKRDIAKGETVLQVPKRFWINPDAVAESEIGNVCSGLKPWIS 131

Query: 311 VALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQLLSTTLNVK 370
           VALFL+RE  +DDS+W+ Y+D+LP  TDST++W      SEEEL+E+QGTQLLSTT++VK
Sbjct: 132 VALFLLREKWRDDSKWKYYMDVLPKSTDSTIYW------SEEELSEIQGTQLLSTTMSVK 191

Query: 371 EYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLVLIPFADLV 430
           +YV++EF KVEE+++ R+  LFP P+TLDDFFWAFGILRSRAFSRLR QNL+L+PFADL 
Sbjct: 192 DYVQNEFQKVEEEVILRNKQLFPFPITLDDFFWAFGILRSRAFSRLRNQNLILVPFADLT 251

Query: 431 NHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           NH+  VT+E++A EV+ PAGLFSWD+LFSLRSP  +KAG+Q+
Sbjct: 252 NHNARVTTEDHAHEVRGPAGLFSWDLLFSLRSPLKLKAGDQL 286

[Close]
BLAST of Cp4.1LG11g07280 vs. Swiss-Prot
Match: RBCMT_PEA (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum GN=RBCMT PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 6.8e-97
Identity = 167/268 (62.31%), Postives = 212/268 (79.10%), Query Frame = 1 

Query: 205 SFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMVSSKTHVKPAIFPQG 264
           SF+PK+P+L+ K  FS  S+AS   +PSL   V TFW+WL++EG++++KT VK ++  +G
Sbjct: 22  SFTPKAPILHLKRSFSAKSVASVGTEPSLSPAVQTFWKWLQEEGVITAKTPVKASVVTEG 81

Query: 265 LGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVSVALFLIRENLKDDS 324
           LGL   KD+S+N+V+L+VPKR WINPDAV  SEIG  CS LKPW+SV LFLIRE  ++DS
Sbjct: 82  LGLVALKDISRNDVILQVPKRLWINPDAVAASEIGRVCSELKPWLSVILFLIRERSREDS 141

Query: 325 RWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQLLSTTLNVKEYVKSEFLKVEEQI 384
            W+ Y  ILP +TDST++W      SEEEL ELQG+QLL TT++VKEYVK+E LK+E++I
Sbjct: 142 VWKHYFGILPQETDSTIYW------SEEELQELQGSQLLKTTVSVKEYVKNECLKLEQEI 201

Query: 385 LRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLVLIPFADLVNHSVSVTSEEYACE 444
           +  +  LFP PVTLDDFFWAFGILRSRAFSRLR +NLV++P ADL+NHS  VT+E++A E
Sbjct: 202 ILPNKRLFPDPVTLDDFFWAFGILRSRAFSRLRNENLVVVPMADLINHSAGVTTEDHAYE 261

Query: 445 VKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           VK  AGLFSWD LFSL+SP SVKAGEQV
Sbjct: 262 VKGAAGLFSWDYLFSLKSPLSVKAGEQV 283

[Close]
BLAST of Cp4.1LG11g07280 vs. Swiss-Prot
Match: RBCMT_ARATH ([Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.1e-90
Identity = 168/281 (59.79%), Postives = 208/281 (74.02%), Query Frame = 1 

Query: 192 SNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMVS 251
           S FL +P     +  S     L+ +P  S+    S      LP NV  FW+WLR +G+VS
Sbjct: 9   SGFLRIPS----IQKSQNPSFLFSRPKKSLVRPISAS-SSELPENVRNFWKWLRDQGVVS 68

Query: 252 SKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVSV 311
            K+  +PA+ P+GLGL   +D+ +NEVVLE+PKR WINP+ VT S+IG  C GLKPWVSV
Sbjct: 69  GKSVAEPAVVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTASKIGPLCGGLKPWVSV 128

Query: 312 ALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQLLSTTLNVKE 371
           ALFLIRE  +++S WR YLD+LP  TDSTVFW      SEEELAEL+GTQLLSTTL VKE
Sbjct: 129 ALFLIREKYEEESSWRVYLDMLPQSTDSTVFW------SEEELAELKGTQLLSTTLGVKE 188

Query: 372 YVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLVLIPFADLVN 431
           YV++EFLK+E++IL  + DLF S +TLDDF WAFGIL+SRAFSRLRGQNLVLIP ADL+N
Sbjct: 189 YVENEFLKLEQEILLPNKDLFSSRITLDDFIWAFGILKSRAFSRLRGQNLVLIPLADLIN 248

Query: 432 HSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           H+ ++ +E+YA E+K  AGLFS D+LFSL+SP  VKAGEQV
Sbjct: 249 HNPAIKTEDYAYEIKG-AGLFSRDLLFSLKSPVYVKAGEQV 277

[Close]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match: A0A0A0LK02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G110250 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 3.5e-132
Identity = 244/298 (81.88%), Postives = 259/298 (86.91%), Query Frame = 1 

Query: 181 MATP------MALASSSSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLP 240
           MATP      MALASSSS+FLSLPRT  HL    K P     P  S++SLASPDLDPSLP
Sbjct: 13  MATPIQTPMGMALASSSSSFLSLPRTPPHLLLPSKRP-----PRLSVTSLASPDLDPSLP 72

Query: 241 SNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVT 300
           SNVHTFWQW+RQEGMVS KTHVKPAIFP+GLGLATTK+LSKNEVVLEVPKRFWINPDAV 
Sbjct: 73  SNVHTFWQWVRQEGMVSYKTHVKPAIFPEGLGLATTKNLSKNEVVLEVPKRFWINPDAVA 132

Query: 301 HSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEEL 360
            SEIGN CSGLKPW+SVALFLIRENLK DSRWRRYLDILP +TDSTVFW      SEEEL
Sbjct: 133 DSEIGNVCSGLKPWISVALFLIRENLKGDSRWRRYLDILPQETDSTVFW------SEEEL 192

Query: 361 AELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFS 420
           AE+QGTQLLSTTLNVKEYVKSEFLKVEE+IL RH DLFPS +TLDDFFWAFGILRSRAFS
Sbjct: 193 AEIQGTQLLSTTLNVKEYVKSEFLKVEEEILLRHKDLFPSRITLDDFFWAFGILRSRAFS 252

Query: 421 RLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           RLRGQNLVLIPFADLVNHS +VT+EE+A EVK PAGLFSWDVLFSLRSP SVKAG+QV
Sbjct: 253 RLRGQNLVLIPFADLVNHSANVTTEEHAWEVKGPAGLFSWDVLFSLRSPLSVKAGDQV 299

[Close]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match: M5XBJ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004634mg PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 8.6e-107
Identity = 199/300 (66.33%), Postives = 234/300 (78.00%), Query Frame = 1 

Query: 181 MATPMALASSSSNFL------SLPRTATHLSFSPKSPVLYPKPCFSISSLASP-DLDPSL 240
           M T   L+SSSS FL       L  T TH S  PK+P    KP  +++SL+SP   DPSL
Sbjct: 1   MVTLFTLSSSSSTFLFPTPRTKLSTTLTHFSSLPKTPTHLKKPVLAVTSLSSPLQCDPSL 60

Query: 241 PSNVHTFWQWLRQEGMVSSKTHV-KPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDA 300
           P  V TFWQWLR EG+V++K+   KPA+ P+G+GL   +++ KNEVVLEVPKR WINPDA
Sbjct: 61  PPAVQTFWQWLRDEGVVTAKSPAAKPALVPEGMGLVAHRNIGKNEVVLEVPKRLWINPDA 120

Query: 301 VTHSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEE 360
           V+ SEIGN CSGLKPWVSVALFL+RE  +DDS+WR YLDILP  T+STVFW      SEE
Sbjct: 121 VSGSEIGNVCSGLKPWVSVALFLLREKYRDDSKWRLYLDILPESTNSTVFW------SEE 180

Query: 361 ELAELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRA 420
           EL ELQGTQLLSTT+ VKEYV+SEFLKVEE+I+  +  LFPSP+TLDDFFWAFGILRSRA
Sbjct: 181 ELDELQGTQLLSTTMGVKEYVQSEFLKVEEEIILPNKQLFPSPITLDDFFWAFGILRSRA 240

Query: 421 FSRLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           FSRLRGQNLVLIP ADL+NHS S+T+EE+A E+K  AGLFSWD LFS+RSP ++KAGEQV
Sbjct: 241 FSRLRGQNLVLIPLADLINHSSSITTEEHAWEIKGAAGLFSWDYLFSIRSPVALKAGEQV 294

[Close]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match: W9S0A8_9ROSA (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase OS=Morus notabilis GN=L484_015694 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 3.5e-100
Identity = 189/299 (63.21%), Postives = 229/299 (76.59%), Query Frame = 1 

Query: 181 MATPMALASSSSNFLSLPRTATHL-SFSPKSPV--LY----PKPCFSISSLASPDLDPSL 240
           M T  +L+SSSS FL  P +  HL ++ PK     LY     +P  S +SL SP+ DPS+
Sbjct: 1   MVTLYSLSSSSSTFLFPPLSLKHLHNYVPKRSTTSLYFNDNNRP-LSATSLQSPESDPSV 60

Query: 241 PSNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAV 300
              V TFW+WLR EG+VS+KT  +PA+ P+GLGL  T+D+++N VVLEVP+R WINPDAV
Sbjct: 61  SPEVRTFWKWLRDEGVVSAKTPARPAVVPEGLGLVATRDIARNHVVLEVPRRLWINPDAV 120

Query: 301 THSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEE 360
             SEIG  CSGLKPW++VALFL+RE   +DS+WR Y D+LP  T+STVFW      SEEE
Sbjct: 121 AASEIGKVCSGLKPWIAVALFLLREKAMEDSKWRLYFDVLPESTNSTVFW------SEEE 180

Query: 361 LAELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAF 420
           L+ELQGTQLLSTTL VKEYV++EF KVEE+++  +  LFPSP+T+DDFFWAFGILRSRAF
Sbjct: 181 LSELQGTQLLSTTLGVKEYVENEFRKVEEEVILPNKRLFPSPITMDDFFWAFGILRSRAF 240

Query: 421 SRLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           SRLR QNLVLIP  DL+NHS  VT+E++A EVK PAGLFSWD LFSLRSP SVKAGEQV
Sbjct: 241 SRLRNQNLVLIPGVDLINHSSKVTTEDHAHEVKGPAGLFSWDYLFSLRSPLSVKAGEQV 292

[Close]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match: A0A061EA07_THECC (Rubisco methyltransferase family protein OS=Theobroma cacao GN=TCM_011643 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.0e-99
Identity = 191/290 (65.86%), Postives = 224/290 (77.24%), Query Frame = 1 

Query: 188 ASSSSNFLSLPRTATHLSF---SPKSPVLYPKP--CFSISSLASPDLDPSLPSNVHTFWQ 247
           A S S FLS   T  HL+     P  P+   K   C S + + SP  DP  P  V TFWQ
Sbjct: 11  APSPSTFLSSSTTLKHLTAFTTKPTVPIHLTKRNICLSAAFVHSPTTDP--PPEVQTFWQ 70

Query: 248 WLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNAC 307
           WL+ +G+VS+K+ V+P + P+GLGL   KD+S+NEVVLE+P RFWIN DAV  SEIG+ C
Sbjct: 71  WLQDQGVVSAKSPVRPGMVPEGLGLIAKKDISRNEVVLEIPNRFWINQDAVAASEIGSVC 130

Query: 308 SGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQL 367
           SGLKPW+SVALFLIRE LK+DS+WR YLDILP  TDSTVFW      SEEELAELQGTQL
Sbjct: 131 SGLKPWISVALFLIREKLKEDSQWRVYLDILPEFTDSTVFW------SEEELAELQGTQL 190

Query: 368 LSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLV 427
           LSTTL VKEYV++EFLKVEE+I+  +  LFP+P+T+DDFFWAFGILRSRAFSRLRGQNLV
Sbjct: 191 LSTTLGVKEYVQNEFLKVEEEIILPNKQLFPAPITVDDFFWAFGILRSRAFSRLRGQNLV 250

Query: 428 LIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           LIP ADL+NHS S+T+E+YA E+K  AGLFS D+LFSLRSP SVKAGEQV
Sbjct: 251 LIPLADLINHSPSITTEDYAWEIKG-AGLFSRDLLFSLRSPLSVKAGEQV 291

[Close]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match: A0A068TWE5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032286001 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.1e-98
Identity = 181/292 (61.99%), Postives = 222/292 (76.03%), Query Frame = 1 

Query: 192 SNFLSLPRTATHLSFSPKSP-----VLYPKPCFS------ISSLASPDLDPSLPSNVHTF 251
           SN  SL  +++  S SP +P         KP F       ++S+ S   DP +P +V TF
Sbjct: 42  SNLFSLNPSSSFPSLSPLTPPKKFSFWKAKPTFQLKKPALVTSVLSTKTDPQIPQSVQTF 101

Query: 252 WQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGN 311
           WQWL  EG+VSSKT VKP + P+GLGL  T+D++KNEVVLEVPKRFWINPDA   SEIG+
Sbjct: 102 WQWLCDEGVVSSKTPVKPGVVPEGLGLVATRDIAKNEVVLEVPKRFWINPDAAAASEIGS 161

Query: 312 ACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGT 371
            CSGLKPW++VALFL+ E  ++DS+W+ Y +ILP  TDST+FW      S+EELAELQGT
Sbjct: 162 VCSGLKPWIAVALFLLTEKSREDSKWKFYFEILPQSTDSTIFW------SDEELAELQGT 221

Query: 372 QLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQN 431
           QLLSTTL VKEYV++EFLKVE +++  +  LFPSP+TLD+FFWAFGILRSRAFSRLR QN
Sbjct: 222 QLLSTTLGVKEYVQNEFLKVEAEVILPNQKLFPSPITLDEFFWAFGILRSRAFSRLRNQN 281

Query: 432 LVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           LV+IPFADL+NHS  VT+E++A EV+ PAGLFSWD LFSLRSP  +KAGEQV
Sbjct: 282 LVVIPFADLINHSDIVTTEDHAHEVRGPAGLFSWDYLFSLRSPLHLKAGEQV 327

[Close]
BLAST of Cp4.1LG11g07280 vs. TAIR10
Match: AT1G14030.1 (AT1G14030.1 Rubisco methyltransferase family protein)

HSP 1 Score: 332.8 bits (852), Expect = 3.5e-91
Identity = 168/281 (59.79%), Postives = 208/281 (74.02%), Query Frame = 1 

Query: 192 SNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLPSNVHTFWQWLRQEGMVS 251
           S FL +P     +  S     L+ +P  S+    S      LP NV  FW+WLR +G+VS
Sbjct: 9   SGFLRIPS----IQKSQNPSFLFSRPKKSLVRPISAS-SSELPENVRNFWKWLRDQGVVS 68

Query: 252 SKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSEIGNACSGLKPWVSV 311
            K+  +PA+ P+GLGL   +D+ +NEVVLE+PKR WINP+ VT S+IG  C GLKPWVSV
Sbjct: 69  GKSVAEPAVVPEGLGLVARRDIGRNEVVLEIPKRLWINPETVTASKIGPLCGGLKPWVSV 128

Query: 312 ALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAELQGTQLLSTTLNVKE 371
           ALFLIRE  +++S WR YLD+LP  TDSTVFW      SEEELAEL+GTQLLSTTL VKE
Sbjct: 129 ALFLIREKYEEESSWRVYLDMLPQSTDSTVFW------SEEELAELKGTQLLSTTLGVKE 188

Query: 372 YVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLRGQNLVLIPFADLVN 431
           YV++EFLK+E++IL  + DLF S +TLDDF WAFGIL+SRAFSRLRGQNLVLIP ADL+N
Sbjct: 189 YVENEFLKLEQEILLPNKDLFSSRITLDDFIWAFGILKSRAFSRLRGQNLVLIPLADLIN 248

Query: 432 HSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           H+ ++ +E+YA E+K  AGLFS D+LFSL+SP  VKAGEQV
Sbjct: 249 HNPAIKTEDYAYEIKG-AGLFSRDLLFSLKSPVYVKAGEQV 277

[Close]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match: gi|449442309|ref|XP_004138924.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 5.0e-132
Identity = 244/298 (81.88%), Postives = 259/298 (86.91%), Query Frame = 1 

Query: 181 MATP------MALASSSSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLP 240
           MATP      MALASSSS+FLSLPRT  HL    K P     P  S++SLASPDLDPSLP
Sbjct: 13  MATPIQTPMGMALASSSSSFLSLPRTPPHLLLPSKRP-----PRLSVTSLASPDLDPSLP 72

Query: 241 SNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVT 300
           SNVHTFWQW+RQEGMVS KTHVKPAIFP+GLGLATTK+LSKNEVVLEVPKRFWINPDAV 
Sbjct: 73  SNVHTFWQWVRQEGMVSYKTHVKPAIFPEGLGLATTKNLSKNEVVLEVPKRFWINPDAVA 132

Query: 301 HSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEEL 360
            SEIGN CSGLKPW+SVALFLIRENLK DSRWRRYLDILP +TDSTVFW      SEEEL
Sbjct: 133 DSEIGNVCSGLKPWISVALFLIRENLKGDSRWRRYLDILPQETDSTVFW------SEEEL 192

Query: 361 AELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFS 420
           AE+QGTQLLSTTLNVKEYVKSEFLKVEE+IL RH DLFPS +TLDDFFWAFGILRSRAFS
Sbjct: 193 AEIQGTQLLSTTLNVKEYVKSEFLKVEEEILLRHKDLFPSRITLDDFFWAFGILRSRAFS 252

Query: 421 RLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           RLRGQNLVLIPFADLVNHS +VT+EE+A EVK PAGLFSWDVLFSLRSP SVKAG+QV
Sbjct: 253 RLRGQNLVLIPFADLVNHSANVTTEEHAWEVKGPAGLFSWDVLFSLRSPLSVKAGDQV 299

[Close]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match: gi|659082137|ref|XP_008441688.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Cucumis melo])

HSP 1 Score: 476.5 bits (1225), Expect = 5.5e-131
Identity = 243/298 (81.54%), Postives = 258/298 (86.58%), Query Frame = 1 

Query: 181 MATP------MALASSSSNFLSLPRTATHLSFSPKSPVLYPKPCFSISSLASPDLDPSLP 240
           MATP      MALASSSS+FLSLPRT  +L    K P     P  S++SLASPDLDPSLP
Sbjct: 1   MATPITTPMGMALASSSSSFLSLPRTPANLLLPSKRP-----PRLSVTSLASPDLDPSLP 60

Query: 241 SNVHTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVT 300
           SNVHTFWQWLRQEG+VSSKTHVKPAIFP+GLGLATTK+LSKNEVVLEVPKRFWINPDAV 
Sbjct: 61  SNVHTFWQWLRQEGVVSSKTHVKPAIFPEGLGLATTKNLSKNEVVLEVPKRFWINPDAVN 120

Query: 301 HSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEEL 360
            S IGN CSGLKPW+SVALFLIRENL  DSRWRRYLDILP +TDSTVFW      SEEEL
Sbjct: 121 DSVIGNVCSGLKPWISVALFLIRENLNGDSRWRRYLDILPQETDSTVFW------SEEEL 180

Query: 361 AELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFS 420
           AE+QGTQLLSTTLNVKEYVKSEFLKVEE+IL RH DLFPS +TLDDFFWAFGILRSRAFS
Sbjct: 181 AEIQGTQLLSTTLNVKEYVKSEFLKVEEEILLRHKDLFPSQITLDDFFWAFGILRSRAFS 240

Query: 421 RLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           RLRGQNLVLIPFADLVNHS +VTSEE+A EVK PAGLFSWDVLFSLRSP SVKAG+QV
Sbjct: 241 RLRGQNLVLIPFADLVNHSANVTSEEHAWEVKGPAGLFSWDVLFSLRSPLSVKAGDQV 287

[Close]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match: gi|596128617|ref|XP_007222120.1| (hypothetical protein PRUPE_ppa004634mg [Prunus persica])

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 199/300 (66.33%), Postives = 234/300 (78.00%), Query Frame = 1 

Query: 181 MATPMALASSSSNFL------SLPRTATHLSFSPKSPVLYPKPCFSISSLASP-DLDPSL 240
           M T   L+SSSS FL       L  T TH S  PK+P    KP  +++SL+SP   DPSL
Sbjct: 1   MVTLFTLSSSSSTFLFPTPRTKLSTTLTHFSSLPKTPTHLKKPVLAVTSLSSPLQCDPSL 60

Query: 241 PSNVHTFWQWLRQEGMVSSKTHV-KPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDA 300
           P  V TFWQWLR EG+V++K+   KPA+ P+G+GL   +++ KNEVVLEVPKR WINPDA
Sbjct: 61  PPAVQTFWQWLRDEGVVTAKSPAAKPALVPEGMGLVAHRNIGKNEVVLEVPKRLWINPDA 120

Query: 301 VTHSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEE 360
           V+ SEIGN CSGLKPWVSVALFL+RE  +DDS+WR YLDILP  T+STVFW      SEE
Sbjct: 121 VSGSEIGNVCSGLKPWVSVALFLLREKYRDDSKWRLYLDILPESTNSTVFW------SEE 180

Query: 361 ELAELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRA 420
           EL ELQGTQLLSTT+ VKEYV+SEFLKVEE+I+  +  LFPSP+TLDDFFWAFGILRSRA
Sbjct: 181 ELDELQGTQLLSTTMGVKEYVQSEFLKVEEEIILPNKQLFPSPITLDDFFWAFGILRSRA 240

Query: 421 FSRLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           FSRLRGQNLVLIP ADL+NHS S+T+EE+A E+K  AGLFSWD LFS+RSP ++KAGEQV
Sbjct: 241 FSRLRGQNLVLIPLADLINHSSSITTEEHAWEIKGAAGLFSWDYLFSIRSPVALKAGEQV 294

[Close]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match: gi|645229681|ref|XP_008221574.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Prunus mume])

HSP 1 Score: 393.7 bits (1010), Expect = 4.7e-106
Identity = 200/300 (66.67%), Postives = 234/300 (78.00%), Query Frame = 1 

Query: 181 MATPMALASSSSNFL------SLPRTATHLSFSPKSPVLYPKPCFSISSLASP-DLDPSL 240
           M T   L+SSSS FL       L  T TH S  PK+P    KP  +++SL+SP   DPSL
Sbjct: 1   MVTLFTLSSSSSTFLFPTPRTKLSTTLTHFSL-PKTPTHLKKPVLAVTSLSSPLQCDPSL 60

Query: 241 PSNVHTFWQWLRQEGMVSSKTHV-KPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDA 300
           P  V TFWQWLR EG+VS+K+   KPA+ P+G+GL   +++ KNEVVLEVPKR WINPDA
Sbjct: 61  PPAVQTFWQWLRDEGVVSAKSPAAKPALVPEGMGLVAHRNIGKNEVVLEVPKRLWINPDA 120

Query: 301 VTHSEIGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEE 360
           V+ SEIGN CSGLKPWVSVALFL+RE  +DDS+WR YLDILP  T+STVFW      SEE
Sbjct: 121 VSASEIGNVCSGLKPWVSVALFLLREKYRDDSKWRPYLDILPESTNSTVFW------SEE 180

Query: 361 ELAELQGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRA 420
           EL ELQGTQLLSTT+ VKEYV+SEFLKVEE+I+  +  LFPSP+TLDDFFWAFGILRSRA
Sbjct: 181 ELDELQGTQLLSTTMGVKEYVQSEFLKVEEEIILPNKQLFPSPITLDDFFWAFGILRSRA 240

Query: 421 FSRLRGQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           FSRLRGQNLVLIP ADL+NHS S+T+EE+A E+K  AGLFSWD LFS+RSP ++KAGEQV
Sbjct: 241 FSRLRGQNLVLIPLADLINHSSSITTEEHAWEIKGAAGLFSWDYLFSIRSPVALKAGEQV 293

[Close]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match: gi|1009154150|ref|XP_015895013.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 390.2 bits (1001), Expect = 5.2e-105
Identity = 196/295 (66.44%), Postives = 228/295 (77.29%), Query Frame = 1 

Query: 181 MATPMALASSSSNFLSLPRTATHLSFS---PKSPVLYPKPCFSISSLASPDLDPSLPSNV 240
           M +   L+SSSS FL LP T T   F     KSP L  K   +++SL SP+ DPS+PS V
Sbjct: 1   MVSIFGLSSSSSTFL-LPSTTTFRHFLNSIQKSPSLNYKKPLTVTSLKSPECDPSIPSEV 60

Query: 241 HTFWQWLRQEGMVSSKTHVKPAIFPQGLGLATTKDLSKNEVVLEVPKRFWINPDAVTHSE 300
            TFW WLR++G+VSSKT  KP I P+GLGL   +D+++NEVVLEVPKR WINPDAV+ SE
Sbjct: 61  QTFWNWLREDGVVSSKTLAKPGIVPEGLGLIAVRDIARNEVVLEVPKRLWINPDAVSASE 120

Query: 301 IGNACSGLKPWVSVALFLIRENLKDDSRWRRYLDILPPQTDSTVFWRMFQCRSEEELAEL 360
           IGN CSGLKPW+ VALFL+RE  ++DS WR YLDILP  T+ST+FW      SEEEL+EL
Sbjct: 121 IGNLCSGLKPWIQVALFLVREKFREDSPWRIYLDILPEYTNSTIFW------SEEELSEL 180

Query: 361 QGTQLLSTTLNVKEYVKSEFLKVEEQILRRHNDLFPSPVTLDDFFWAFGILRSRAFSRLR 420
           QGTQLLSTT  VKEYV+SEF K+E +I+  H  LFPSP+TLDDFFWAFGILRSRAFSRLR
Sbjct: 181 QGTQLLSTTEGVKEYVQSEFQKLEAEIILPHEQLFPSPITLDDFFWAFGILRSRAFSRLR 240

Query: 421 GQNLVLIPFADLVNHSVSVTSEEYACEVKAPAGLFSWDVLFSLRSPTSVKAGEQV 473
           GQNLVLIP ADL+NHS  +T+EE+A EVK  AGLFSWD LFSLRSP  VKAGEQV
Sbjct: 241 GQNLVLIPMADLINHSSKITTEEHAWEVKGAAGLFSWDTLFSLRSPIPVKAGEQV 288

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBCMT_TOBAC5.0e-10060.99Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferas... [more]
RBCMT_PEA6.8e-9762.31Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferas... [more]
RBCMT_ARATH6.1e-9059.79[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Ar... [more]
BLAST of Cp4.1LG11g07280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK02_CUCSA3.5e-13281.88Uncharacterized protein OS=Cucumis sativus GN=Csa_2G110250 PE=4 SV=1[more]
M5XBJ7_PRUPE8.6e-10766.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004634mg PE=4 SV=1[more]
W9S0A8_9ROSA3.5e-10063.21Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferas... [more]
A0A061EA07_THECC5.0e-9965.86Rubisco methyltransferase family protein OS=Theobroma cacao GN=TCM_011643 PE=4 S... [more]
A0A068TWE5_COFCA1.1e-9861.99Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032286001 PE=4 SV=1[more]
BLAST of Cp4.1LG11g07280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14030.13.5e-9159.79 Rubisco methyltransferase family protein[more]
BLAST of Cp4.1LG11g07280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442309|ref|XP_004138924.1|5.0e-13281.88PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy... [more]
gi|659082137|ref|XP_008441688.1|5.5e-13181.54PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy... [more]
gi|596128617|ref|XP_007222120.1|1.2e-10666.33hypothetical protein PRUPE_ppa004634mg [Prunus persica][more]
gi|645229681|ref|XP_008221574.1|4.7e-10666.67PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy... [more]
gi|1009154150|ref|XP_015895013.1|5.2e-10566.44PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methy... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0018023 peptidyl-lysine trimethylation
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0044723 single-organism carbohydrate metabolic process
biological_process GO:0009657 plastid organization
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:1901360 organic cyclic compound metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0032259 methylation
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
cellular_component GO:0009507 chloroplast
molecular_function GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016279 protein-lysine N-methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07280.1Cp4.1LG11g07280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001214SET domainPFAMPF00856SETcoord: 264..442
score: 1.
IPR001214SET domainPROFILEPS50280SETcoord: 247..474
score: 10
NoneNo IPR availableGENE3DG3DSA:3.90.1410.10coord: 56..182
score: 5.1E-26coord: 236..472
score: 1.6
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 229..472
score: 1.5
NoneNo IPR availablePANTHERPTHR13271:SF29[FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTICcoord: 229..472
score: 1.5
NoneNo IPR availableunknownSSF82199SET domaincoord: 236..472
score: 1.26E-54coord: 56..183
score: 7.19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g07280CmaCh05G008510Cucurbita maxima (Rimu)cmacpeB768
Cp4.1LG11g07280CmoCh05G008770Cucurbita moschata (Rifu)cmocpeB725
Cp4.1LG11g07280Csa2G110250Cucumber (Chinese Long) v2cpecuB107
Cp4.1LG11g07280MELO3C008524Melon (DHL92) v3.5.1cpemeB101
Cp4.1LG11g07280CSPI02G08470Wild cucumber (PI 183967)cpecpiB103
Cp4.1LG11g07280MELO3C008524.2Melon (DHL92) v3.6.1cpemedB125
Cp4.1LG11g07280CsaV3_2G010860Cucumber (Chinese Long) v3cpecucB0118
Cp4.1LG11g07280Bhi06G000739Wax gourdcpewgoB0117
Cp4.1LG11g07280CsGy2G008770Cucumber (Gy14) v2cgybcpeB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g07280Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g07280Cucumber (Chinese Long) v2cpecuB098
Cp4.1LG11g07280Watermelon (Charleston Gray)cpewcgB098