Cp4.1LG11g04180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g04180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Monofunctional biosynthetic peptidoglycan transglycosylase
Location	Cp4.1LG11 : 2358273 .. 2360492 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAACAAAATTGATAAGAATAACCTTAGCTTCCCCTTCTCTTCCGCTCATACCCACAAATTTCAATGGAATGGAAGATGGAGGATTAAAGAAGCAAAATTCAGTTGCTCGAGGGATGGAAAAAAAATGGGGAAACAAGAATCCAAACAGCACTCTTATCAAAACTGGTTGAATGAATCCTCTTTGATTAAATCATTTCCCCAACCCAATAAAAAGCTTAAATCTCACTTCATAAAGATAAGAGAATTCCCAGTACTTAAATGCCACAACTATTCTCTCTCTTTCTCTGTCTATCTCCATCTCTCTCAACTTTATGTATGTAAAAATAATAAATGGGAGCTACTTTAAAGGGCAGAGGATAAAAGGAAGAAATTGGAAGGGAGTTTATAGGGAAATCGTGGTCCTATGGGCCAAAACTTTAGTTTAGGTGATAAATTTTTTTGTTTCTCAATCCACTTTTCGGGGGGTTTTTATTTTCCTCTTCCTCAGAATAAATTCTCTTACAGTTTTAAATTAATTAGTTTCTGGGAGTTATAGAATATTTTTTTGGGTTCTTCTTTCTGCCCATTTAACAATGAAAATGGCATATTACCAATCATCTTTTCCCCCTATAGGAAACACCCATCATTGCTCCCAACAATCCTTTTCAACCTTAGAAACCTGAGCTTCTAAAAAGACTTAGAATTGGGTGTCTAATTCCCATTCTTCCATTTCTTCCTTTAATTTCTCAATGCTTCTTCAACTTAAATACCAGCCTTCATAATATCCTTTTCTCTCCCTCTTCTACTACTACCCCTCCATTTCTCTCTCCCCCTCTCTCTCTTTCTCTCTCTGCTTTTCCTTTTAGTTCCCATAAGGTCACAATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTCCATCTCAGAAATCATAATTGCTCGTGTCTTTGTTTGTTCTGTTATGTTTTATTTTGTTTGGAAGCATTGGGTTCAGAATCTAAGAGATTTTGAACTCTTGATATACAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAGACAGATGTTGAAAAATATTGTAGTTGTTATGGTTCAAAGCCCAAAACGAAAAAAAAAAAGGAAAAAAAAAAAAAAAACAAGCAGAAGAATCAATGGATAGAGTTGTACCTTTTAACCCTCTGCTTCCGTTTCCAGACTTCTCTTCAATCCTCTAAAAAGTAAAAACAATCAACAGATGAATATAGGGTCAAAAAAGAAATGAGAAACCCATAAATTAATTAATACTAAAAAGTATTATCAAATCTTTACTAATTTTTTTATAGCA

mRNA sequence

AAAAAAAAAAACAAAATTGATAAGAATAACCTTAGCTTCCCCTTCTCTTCCGCTCATACCCACAAATTTCAATGGAATGGAAGATGGAGGATTAAAGAAGCAAAATTCAGTTGCTCGAGGGATGGAAAAAAAATGGGGAAACAAGAATCCAAACAGCACTCTTATCAAAACTGGTTGAATGAATCCTCTTTGATTAAATCATTTCCCCAACCCAATAAAAAGCTTAAATCTCACTTCATAAAGATAAGAGAATTCCCAGTACTTAAATGCCACAACTATTCTCTCTCTTTCTCTGTCTATCTCCATCTCTCTCAACTTTATGTATGTAAAAATAATAAATGGGAGCTACTTTAAAGGGCAGAGGATAAAAGGAAGAAATTGGAAGGGAGTTTATAGGGAAATCGTGGTCCTATGGGCCAAAACTTTAGTTTAGGTGATAAATTTTTTTGTTTCTCAATCCACTTTTCGGGGGGTTTTTATTTTCCTCTTCCTCAGAATAAATTCTCTTACAGTTTTAAATTAATTAGTTTCTGGGAGTTATAGAATATTTTTTTGGGTTCTTCTTTCTGCCCATTTAACAATGAAAATGGCATATTACCAATCATCTTTTCCCCCTATAGGAAACACCCATCATTGCTCCCAACAATCCTTTTCAACCTTAGAAACCTGAGCTTCTAAAAAGACTTAGAATTGGGTGTCTAATTCCCATTCTTCCATTTCTTCCTTTAATTTCTCAATGCTTCTTCAACTTAAATACCAGCCTTCATAATATCCTTTTCTCTCCCTCTTCTACTACTACCCCTCCATTTCTCTCTCCCCCTCTCTCTCTTTCTCTCTCTGCTTTTCCTTTTAGTTCCCATAAGGTCACAATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAGACAGATGTTGAAAAATATTGTAGTTGTTATGGTTCAAAGCCCAAAACGAAAAAAAAAAAGGAAAAAAAAAAAAAAAACAAGCAGAAGAATCAATGGATAGAGTTGTACCTTTTAACCCTCTGCTTCCGTTTCCAGACTTCTCTTCAATCCTCTAAAAAGTAAAAACAATCAACAGATGAATATAGGGTCAAAAAAGAAATGAGAAACCCATAAATTAATTAATACTAAAAAGTATTATCAAATCTTTACTAATTTTTTTATAGCA

Coding sequence (CDS)

ATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAG

Protein sequence

MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR

Homology

[Close]

BLAST of Cp4.1LG11g04180 vs. TrEMBL
Match: A0A0A0LK57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G317400 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.1e-177
Identity = 314/324 (96.91%), Postives = 319/324 (98.46%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLS LRSFHSQL LLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSHLRSFHSQLILLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSL+THRHLSPQLSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLETHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELRAELERRVG+GSQG+VEWETEIGIRE  ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Cp4.1LG11g04180 vs. TrEMBL
Match: B9GUH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09090g PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 1.1e-166
Identity = 292/324 (90.12%), Postives = 309/324 (95.37%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFY+FLTRGIDDLERVYL+NNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLANNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSLD HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLDNHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEE+NRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMIST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+G+RE  +NLR CFGVLRSGAENI+
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGMRERVDNLRGCFGVLRSGAENII 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
            QLDDF DEIVEGRKKLLDFCSHR
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSHR 322

[Close]

BLAST of Cp4.1LG11g04180 vs. TrEMBL
Match: U5GPU0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09090g PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 5.6e-166
Identity = 291/323 (90.09%), Postives = 308/323 (95.36%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFY+FLTRGIDDLERVYL+NNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLANNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSLD HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLDNHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEE+NRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMIST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+G+RE  +NLR CFGVLRSGAENI+
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGMRERVDNLRGCFGVLRSGAENII 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSH 324
            QLDDF DEIVEGRKKLLDFCSH
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSH 321

[Close]

BLAST of Cp4.1LG11g04180 vs. TrEMBL
Match: B9H782_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16380g PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.1e-165
Identity = 291/324 (89.81%), Postives = 307/324 (94.75%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSS NS+NGFY+FLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSANSLNGFYSFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSL+ HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGLSGIENYYSAGFNITSSLENHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
            RAISGCRREAVGLEEENRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 TRAISGCRREAVGLEEENRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAF+IST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFLISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+GIRE  +NLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGIRERVDNLRGCFGVLRSGAENIV 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
            QLDDF DEIVEGRKKLLDFCSHR
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSHR 322

[Close]

BLAST of Cp4.1LG11g04180 vs. TrEMBL
Match: A0A061FHH0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034998 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 8.1e-165
Identity = 294/324 (90.74%), Postives = 307/324 (94.75%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSST+SVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQL LLVQKLH
Sbjct: 1   MDPSSTSSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLLLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+GISG+EN+YSAGFNITSSLD HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGISGMENYYSAGFNITSSLDNHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           +RAISGCRREAVGLEEENRALME RIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 VRAISGCRREAVGLEEENRALMETRIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMISTARLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTARLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSK+AMEELR ELER  G G  G VE ETE+GIRE  ENL+ CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKLAMEELRGELERWCGQG--GAVECETEVGIRERVENLKGCFGVLRSGAENIV 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
            QLDDF DEIVEGRKKLLDFCSHR
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSHR 322

[Close]

BLAST of Cp4.1LG11g04180 vs. TAIR10
Match: AT1G22030.1 (AT1G22030.1 Protein BYPASS related (InterPro:IPR008511))

HSP 1 Score: 384.4 bits (986), Expect = 6.8e-107
Identity = 210/345 (60.87%), Postives = 250/345 (72.46%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPS  NSVNGFY+FL R ++DLERVYLSNNFMS+ FLQR L LLR+ HS LTLLVQKL 
Sbjct: 1   MDPSCANSVNGFYSFLNRSMEDLERVYLSNNFMSVHFLQRALCLLRTSHSHLTLLVQKLQ 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+AC V+K+ +S +ENF SAG +I S+LD  R LSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACLVIKSAVSSVENFSSAGISIASTLD--RRLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQ--PLSLRFDEKVSIESKL---NGFNGFRGVLYA 180
           IRAISGCRREA+G+EEENRALME R+Q  P         ++ES     NGF+GFRGVLYA
Sbjct: 121 IRAISGCRREAIGIEEENRALMENRVQRFPFWSEQTSATAMESSTKLQNGFSGFRGVLYA 180

Query: 181 MRNVSSLLLMILLYGLVYCWP------------ESNFVRGGYEGCLFFGSAFMISTARLQ 240
            RN+SSLLLM+L+ GLVYC+P            ++    GG+ G +           RLQ
Sbjct: 181 TRNMSSLLLMVLMNGLVYCFPGDAATQTQTQITQTQSQVGGFAGAM----------GRLQ 240

Query: 241 QRVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRV----GIGSQGVVEWETEIGIR 300
           QRVA E+ +M  R GIL++E+RRSK A+EEL+AELERR     G G +   E E E  +R
Sbjct: 241 QRVAAEVGRMGIRKGILMHEYRRSKAALEELKAELERRFCGGGGGGGEREEEEEDERELR 300

Query: 301 ETFENLRDCFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 325
           E  ENL+  FG LR+G E+IV Q+DDF DEIVEGRKKLLDFCSHR
Sbjct: 301 ERVENLKGYFGNLRNGTESIVAQIDDFFDEIVEGRKKLLDFCSHR 333

[Close]

BLAST of Cp4.1LG11g04180 vs. TAIR10
Match: AT1G77855.1 (AT1G77855.1 unknown protein)

HSP 1 Score: 363.2 bits (931), Expect = 1.6e-100
Identity = 197/333 (59.16%), Postives = 246/333 (73.87%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MD S +NSVNGFY+FL R ++DLERVY+SNNFMS+QFLQRV+ LLR+ HS LTLLVQKL+
Sbjct: 1   MDQSCSNSVNGFYSFLNRSMEDLERVYISNNFMSLQFLQRVICLLRTSHSHLTLLVQKLN 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRH----LSPQL 120
           LPVG+KWLD+YMDE+SKLWD CHV+K+ IS IE+F S+  +ITS+LD H H    LSPQ+
Sbjct: 61  LPVGDKWLDDYMDETSKLWDVCHVIKSAISTIESFCSSAISITSTLDGHYHHRRLLSPQI 120

Query: 121 SRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSI----ESKL-NGFNGFRG 180
           SRQVIRAISGCRREAVG+EEENRALME RIQ     + E+V+      SK+ NGF+GFRG
Sbjct: 121 SRQVIRAISGCRREAVGIEEENRALMENRIQRFPF-WSEQVTTTGMESSKIQNGFSGFRG 180

Query: 181 VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIN 240
           V+  M+N++SLLL+IL+ GLVY  P    V  G             +  RL+QRVA E+ 
Sbjct: 181 VMNTMKNINSLLLVILMQGLVYYIPGDTTVPTG-------------TMMRLKQRVAAEME 240

Query: 241 QMNGRPGILLYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGV 300
           ++  R G+++YE+RRSK AMEEL+ ELERR   G  G  E   E G+RE  ENL+   G 
Sbjct: 241 RIGVRKGMMMYEYRRSKTAMEELKVELERRCCGG--GGEEEAVEKGLRERIENLKGSVGS 300

Query: 301 LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 325
           LR+G E+IV Q+DDF D+IV+GRK LLD+CSHR
Sbjct: 301 LRNGTESIVAQIDDFFDDIVDGRKMLLDYCSHR 317

[Close]

BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match: gi|659089172|ref|XP_008445364.1| (PREDICTED: uncharacterized protein LOC103488422 [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 4.8e-179
Identity = 316/324 (97.53%), Postives = 321/324 (99.07%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYS+GFNITSSL+THRHLSPQLSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELRAELERRVG+GSQGVVEWETEIGIRE  ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match: gi|778670243|ref|XP_004151123.2| (PREDICTED: uncharacterized protein LOC101222277 [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 1.6e-177
Identity = 314/324 (96.91%), Postives = 319/324 (98.46%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLS LRSFHSQL LLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSHLRSFHSQLILLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSL+THRHLSPQLSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLETHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELRAELERRVG+GSQG+VEWETEIGIRE  ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match: gi|743846065|ref|XP_011027643.1| (PREDICTED: uncharacterized protein LOC105127877 [Populus euphratica])

HSP 1 Score: 595.5 bits (1534), Expect = 5.5e-167
Identity = 293/324 (90.43%), Postives = 310/324 (95.68%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFY+FLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSLD+HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLDSHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEE+NRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMIST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+G+RE  +NLR CFGVLRSGAENI+
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGMRERVDNLRGCFGVLRSGAENII 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
            QLDDF DEIVEGRKKLLDFCSHR
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSHR 322

[Close]

BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match: gi|224066893|ref|XP_002302266.1| (hypothetical protein POPTR_0002s09090g [Populus trichocarpa])

HSP 1 Score: 594.0 bits (1530), Expect = 1.6e-166
Identity = 292/324 (90.12%), Postives = 309/324 (95.37%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFY+FLTRGIDDLERVYL+NNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLANNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSLD HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLDNHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEE+NRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMIST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+G+RE  +NLR CFGVLRSGAENI+
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGMRERVDNLRGCFGVLRSGAENII 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 325
            QLDDF DEIVEGRKKLLDFCSHR
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSHR 322

[Close]

BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match: gi|566157035|ref|XP_006386387.1| (hypothetical protein POPTR_0002s09090g [Populus trichocarpa])

HSP 1 Score: 591.7 bits (1524), Expect = 8.0e-166
Identity = 291/323 (90.09%), Postives = 308/323 (95.36%), Query Frame = 1


Query: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
           MDPSSTNSVNGFY+FLTRGIDDLERVYL+NNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLANNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 61  LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
           LPVG+KWLDEYMDESSKLW+ACHVLK+G+SGIEN+YSAGFNITSSLD HRHLSPQLSRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLDNHRHLSPQLSRQV 120

Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEE+NRALME RIQPLSLRFDEK+SIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEDNRALMETRIQPLSLRFDEKISIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
           SLLLMILLYGLVYCWPES+F+RGGYEGCLFFGSAFMIST RLQQRVA EINQ+NGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESSFLRGGYEGCLFFGSAFMISTGRLQQRVAAEINQINGRPGIL 240

Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
           LYEFRRSKMAMEELR ELER+ G G  G VEWETE+G+RE  +NLR CFGVLRSGAENI+
Sbjct: 241 LYEFRRSKMAMEELRGELERKCGQG--GAVEWETEVGMRERVDNLRGCFGVLRSGAENII 300

Query: 301 CQLDDFIDEIVEGRKKLLDFCSH 324
            QLDDF DEIVEGRKKLLDFCSH
Sbjct: 301 GQLDDFFDEIVEGRKKLLDFCSH 321

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g04180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG11g04180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK57_CUCSA	1.1e-177	96.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G317400 PE=4 SV=1	[more]
B9GUH4_POPTR	1.1e-166	90.12	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09090g PE=4 SV=1	[more]
U5GPU0_POPTR	5.6e-166	90.09	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09090g PE=4 SV=1	[more]
B9H782_POPTR	2.1e-165	89.81	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16380g PE=4 SV=1	[more]
A0A061FHH0_THECC	8.1e-165	90.74	Uncharacterized protein OS=Theobroma cacao GN=TCM_034998 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g04180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22030.1	6.8e-107	60.87	Protein BYPASS related (InterPro:IPR008511)	[more]
AT1G77855.1	1.6e-100	59.16	unknown protein	[more]

BLAST of Cp4.1LG11g04180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089172\|ref\|XP_008445364.1\|	4.8e-179	97.53	PREDICTED: uncharacterized protein LOC103488422 [Cucumis melo]	[more]
gi\|778670243\|ref\|XP_004151123.2\|	1.6e-177	96.91	PREDICTED: uncharacterized protein LOC101222277 [Cucumis sativus]	[more]
gi\|743846065\|ref\|XP_011027643.1\|	5.5e-167	90.43	PREDICTED: uncharacterized protein LOC105127877 [Populus euphratica]	[more]
gi\|224066893\|ref\|XP_002302266.1\|	1.6e-166	90.12	hypothetical protein POPTR_0002s09090g [Populus trichocarpa]	[more]
gi\|566157035\|ref\|XP_006386387.1\|	8.0e-166	90.09	hypothetical protein POPTR_0002s09090g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008483	transaminase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g04180.1	Cp4.1LG11g04180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 3..324 score: 3.4E
None	No IPR available	PANTHER	PTHR31509:SF2	F2E2.8	coord: 3..324 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g04180	CmaCh05G004790	Cucurbita maxima (Rimu)	cmacpeB766
Cp4.1LG11g04180	CmaCh12G001380	Cucurbita maxima (Rimu)	cmacpeB172
Cp4.1LG11g04180	CmoCh05G005020	Cucurbita moschata (Rifu)	cmocpeB720
Cp4.1LG11g04180	CmoCh12G001100	Cucurbita moschata (Rifu)	cmocpeB148
Cp4.1LG11g04180	Cla022072	Watermelon (97103) v1	cpewmB099
Cp4.1LG11g04180	Csa2G317400	Cucumber (Chinese Long) v2	cpecuB108
Cp4.1LG11g04180	MELO3C011375	Melon (DHL92) v3.5.1	cpemeB088
Cp4.1LG11g04180	ClCG08G010880	Watermelon (Charleston Gray)	cpewcgB122
Cp4.1LG11g04180	CSPI02G16000	Wild cucumber (PI 183967)	cpecpiB104
Cp4.1LG11g04180	Lsi08G009420	Bottle gourd (USVL1VR-Ls)	cpelsiB098
Cp4.1LG11g04180	MELO3C011375.2	Melon (DHL92) v3.6.1	cpemedB111
Cp4.1LG11g04180	CsaV3_1G023060	Cucumber (Chinese Long) v3	cpecucB0103
Cp4.1LG11g04180	Bhi04G000595	Wax gourd	cpewgoB0148
Cp4.1LG11g04180	Carg09231	Silver-seed gourd	carcpeB0199
Cp4.1LG11g04180	Carg20556	Silver-seed gourd	carcpeB0924

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g04180	Cp4.1LG07g01160	Cucurbita pepo (Zucchini)	cpecpeB138

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g04180	Wax gourd	cpewgoB0135