Cp4.1LG11g02250 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g02250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cysteine proteinase
Location	Cp4.1LG11 : 1234365 .. 1237861 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATAATATCTCAGATCCCCGTTCACTCTGTCACTGTCTCTGTGGAGCGGCTCGCTGCAATCGCTTTCTTCTTTACCATTCTACTTTCGGCGACGGTAGCCTACGACGTATCTTCCGATCTAATGTACGGCGGCGACAGCGAGGACGAAGATCTTGTGATCCTTGAAGTCGTCTCCTTACCGCTTAGCAAAAAACTTCCAGAACTCCGAACTCAAGTTCGGAAAGGCCTACGCCATTGATGAGGAGCACGATTACAGGTTCCGTGTATTCAAGGCTTACCTCCGTAGAGCCAAGCACCAGCAGGAGCTCGATCCTGGCGCCGTCCATGGCGTCACGTGGTTATCCGATCTCACCGAGTCCTAGTTCCGTACACATTTCGTCGGAGTGAATCGGCTCCGTCTTTCTGCCGATTCTCAGAAGGTTCCGATCCTTCCTATTGGCGACCTAGCCTCCTACTTCGATTGACGTTACCACGGTTCCGTCCCGCTGGTCAAAGAGCAGGTATGAGTTATTTCGGAAAGTTTTCTCAAGTCTGTCGAGTATTTGAACTTCCGATTTTGCTTTCTTATTTTTTGAGAGAATTGTCTGTGTTCTGTATCGTTTAGGATTCACGTGGCTTGCGCTGGTCTTTGAGTGAGTAACAGCTTGTTGATTCATGAGGTTCGTTCCATTCCTTTCCTGCCTTGGATTTATTGCCTTTTGTTTCTATTTGCAATTGTTACTACGATCCTCTTTCTATCTCCTTAGCCTGCTGCTGCAAAAGTCGAACCAAATAAAATAAATTGAGGTTCGGTTTATAACCTGTTGTTTTTAGAAACTGTGCTGGTTTACTCCTACTTTTTGTCTTAAAATCTACTGTATGTTTTTTCTTTCTTTCCTTTATTGTGATAGGAAACAGAATAGTTCTTATGTGAAAGTTTAAAATCATTTTAAAATATGACTTTATTAATTCAAAATCAATTTTATGTTTGATTATTTTTCATACATGATCATAATTGATGTTCAATAGCATGATTGGAAATAAGTTTATATATAAAAATAGTTTTAACTAGTTAAAATTTACTTTAGAGTAGGTTTCTAGTCTCTTTTTTAAAATTTGATTAGATTTCGAAACTTCAAAAAAAATTAAGAAAAACAGTTGTAAGTTTGATGTGTTTTTTTAATGGTCAGAACAGTATAATGATCTGTATATATCTTTTTCAAAGTCAATGAAATGATATATCCATGAACAAATCTGTTTTTTCTCTCTAAGGACGGCATGAACCTATATCTATTCAGGTCTTTTCTTTTCTTTTTTCAACGAGAATCTATTCAGGTCATGTTGAAAAACTGTTGTTGCTTTGCGAAACTAAGGAATGATTTCGTACTCTCTGTTTCCGTTTATTTCAAGCGGAAATGTTAGTAGAATTCATTTATTTATTAAAGTTAAAAATAATTCTTAGAGGAAAATTTTTATTCCCTACTTTATGAACTATATATCATTTTATGTAACAAATGGGAAACACATCGACGTTTTTGGTAATTTGGAGTCGGCGACAAATGAATAATTTAGTATTGTTCTTATCTTTTCCAAAAGAGAAGAATAATTATTTTTGAAGTTAGGAAATTCTGAAGAAATATATAAAGACATCACAAGATTTTGTTTTATGTTAGTTGTTGAAGAGATTACAAGGAAGTTATCTTTGAAATGTTATTTGAAAATTAATATATTATTTTTGTTTATGATAAAATTATAGAGAATTTATTGGGTGATTTTTGACCCTGACGCTTTTTGGTTGTTTCCTATTTTCTAAATATAATCTTGAAATTTTGACTAAAATTTAAACGTTTAATCTGTTCTACAAAGTTATTACTTTCAACATTTGAAATTCAATTAAAATTTTAAAAATACTCTTATAGTTTAATTAGTTGAACTAAAAATAGGAATAGAATTAAATTATTTATTTTGTTGTCCATGCTGAAACCACAAATCCTATTAAAGCTACCCAAACTTTATTGAATTGCAAGAAAAAGATGAAGTTACTTCGAAATATAGTGTTACTGTTGTTGAAATGAATTAAACTGACAAATATTTGAACAGATGTTTTAGTTCAAATTAGTTGGTCTAAACGAATTCAACATGAATCAATCAATAGTNAAGAGTTTTTTTTTTTTTTTTTTTTTACGGGGTTGTCATTTAGATGGGTTATATCAAAACACTCCATTATTTATGTAGTTGAGTTCTAACTCCCACGTTGATCGAGTAGTTAGAAATTTCTACCACTAGCACTCACCACTATATTTTTTACAAATTGTTATATTTCTTTATTTATATATTTTTGGGAGAAGTCTCCTCTCCCCCTCCACTAATCTTCTTACAATATTATTATTATTATTATTGTTTTGGAAAATACTCTTTCTGCCCTCTCTCCACTAAAATTTTGACAATTTTTTTTTGTTGGGAAACAAATTTTTGTATGTAGTTGTTTGGATAGTATGGTTCTTGGACCTTGAGATGGGAACACGAATATCAAAACGTTAAGTTCATCACATGCATTTCTGACCACCAAATTTTAGCATACGATCCCTTAAAAGATAACGAAAACCATTGAAATAAGATTTTATGATATTTTTTTATGTTGTAGAAATTAAGCTGATTTATAACATAGTACGGTAGATATGGTATCGAATACCTTTTCAAAGTTGGAAGTTTAATTCCTACGTTATTGTACAAAAGAAAAGAAAAGGGAAAGGGTCATTTCCATTTTGATTAAAAAATAAGTTTTTAACAACACATTTTGATGATGGCTATTATATTGCTTGAACTTAGAACTCATCAATTAATAATCGACCTCCAGATATTCATGACATTATCAGTAACCTCTCTGAGTAATTTCTCGTTAACCATAGTTAAGATGACAGTATCAGTGTCATCAGTGAAAATTTGAAAGTAAAAAAGTAGACTTTTGCAGTGTGATCCTGAGGAAGCTGGTGCATGCGACGCGATGGGGGACTGATGAACTCATCTTTTGAGTACTTTTTTTAAAGCTGGTGGATTGGAGCGACAGGAGGACTATCCTTCCACTGGGAGGTATCGTGGCCCTTGCAAATTCCAAAGCGGCATAAAGATGCCGACCAAAGTGCAGCAAACTTGATCAAGAATGGCCCTTCAGCTTAGTAATGAAATTCTTCTCCATTATTATCATCAATTTTTAAATGCGTTATTTGATTTCTCAACCTGCTTTAAACCTCATTGGTGATGTGAAAAACTGAAGCTAATGATTTGGGCCTTTTCTTTAACGTAGACATTGTTTGTTAACCATTTCCTTTTTAGTTTTCTACTTTATCTTAGACCGCTGCTGTTGGAGTCGATGCAATTTTCCTGCAGACCAACGTAAGAGGAATTTCATGCGTGGGTGAAAACTGGGGAGAAAATGGCTACTACTTAATCTGCAAGGGCAACAATACCTGTGGATCTGAGTCGATGGTCTCGTCTGTGGCTGCTACCCCAAACTAA

mRNA sequence

CCCATAATATCTCAGATCCCCGTTCACTCTGTCACTGTCTCTGTGGAGCGGCTCGCTGCAATCGCTTTCTTCTTTACCATTCTACTTTCGGCGACGGTAGCCTACGACGTATCTTCCGATCTAATGTACGGCGGCGACAGCGAGGACGAAGATCTTTCGTCTCCTTACCGCTTAGCAAAAAACTTCCAGAACTCCGAACTCAAGTTCGGAAAGGCCTACGCCATTGATGAGGAGCACGATTACAGGTTCCGTAGCCAAGCACCAGCAGGAGCTCGATCCTGGCGCCGTCCATGGCGTCACGTGGTTATCCGATCTCACCGAGTCCTAGTTCCGTACACATTTCGTCGGAGTGAATCGGCTCCGTCTTTCTGCCGATTCTCAGAAGGTTCCGATCCTTCCTATTGGCGACCTAGCCTCCTACTTCGATTGACGTTACCACGGTTCCGTCCCGCTGGTCAAAGAGCAGCTGGTGGATTGGAGCGACAGGAGGACTATCCTTCCACTGGGAGGTATCGTGGCCCTTGCAAATTCCAAAGCGGCATAAAGATGCCGACCAAAACCGCTGCTGTTGGAGTCGATGCAATTTTCCTGCAGACCAACGTAAGAGGAATTTCATGCGTGGGTGAAAACTGGGGAGAAAATGGCTACTACTTAATCTGCAAGGGCAACAATACCTGTGGATCTGAGTCGATGGTCTCGTCTGTGGCTGCTACCCCAAACTAA

Coding sequence (CDS)

CCCATAATATCTCAGATCCCCGTTCACTCTGTCACTGTCTCTGTGGAGCGGCTCGCTGCAATCGCTTTCTTCTTTACCATTCTACTTTCGGCGACGGTAGCCTACGACGTATCTTCCGATCTAATGTACGGCGGCGACAGCGAGGACGAAGATCTTTCGTCTCCTTACCGCTTAGCAAAAAACTTCCAGAACTCCGAACTCAAGTTCGGAAAGGCCTACGCCATTGATGAGGAGCACGATTACAGGTTCCGTAGCCAAGCACCAGCAGGAGCTCGATCCTGGCGCCGTCCATGGCGTCACGTGGTTATCCGATCTCACCGAGTCCTAGTTCCGTACACATTTCGTCGGAGTGAATCGGCTCCGTCTTTCTGCCGATTCTCAGAAGGTTCCGATCCTTCCTATTGGCGACCTAGCCTCCTACTTCGATTGACGTTACCACGGTTCCGTCCCGCTGGTCAAAGAGCAGCTGGTGGATTGGAGCGACAGGAGGACTATCCTTCCACTGGGAGGTATCGTGGCCCTTGCAAATTCCAAAGCGGCATAAAGATGCCGACCAAAACCGCTGCTGTTGGAGTCGATGCAATTTTCCTGCAGACCAACGTAAGAGGAATTTCATGCGTGGGTGAAAACTGGGGAGAAAATGGCTACTACTTAATCTGCAAGGGCAACAATACCTGTGGATCTGAGTCGATGGTCTCGTCTGTGGCTGCTACCCCAAACTAA

Protein sequence

PIISQIPVHSVTVSVERLAAIAFFFTILLSATVAYDVSSDLMYGGDSEDEDLSSPYRLAKNFQNSELKFGKAYAIDEEHDYRFRSQAPAGARSWRRPWRHVVIRSHRVLVPYTFRRSESAPSFCRFSEGSDPSYWRPSLLLRLTLPRFRPAGQRAAGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTAAVGVDAIFLQTNVRGISCVGENWGENGYYLICKGNNTCGSESMVSSVAATPN

Homology

[Close]

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.8e-09
Identity = 45/144 (31.25%), Postives = 60/144 (41.67%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQ---------------------SGIKMPTKTAAVGVDA 215
           AGGLE ++DYP TG   G CKF                      S   +     A+G++A
Sbjct: 223 AGGLESEKDYPYTGS-DGKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINA 282

Query: 216 IFLQTNVRGISCV--------------------------------------GENWGENGY 238
            ++QT + G+SC                                       GENWGENGY
Sbjct: 283 AYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGY 342

[Close]

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.6e-07
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAA 238
           GENWGENGYY IC+G N CG +SMVS+VAA
Sbjct: 61  GENWGENGYYKICRGRNICGVDSMVSTVAA 90

[Close]

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot
Match: RD19A_ARATH (Cysteine protease RD19A OS=Arabidopsis thaliana GN=RD19A PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAAT 239
           GE WGENG+Y ICKG N CG +SMVS+VAAT
Sbjct: 332 GETWGENGFYKICKGRNICGVDSMVSTVAAT 362

[Close]

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot
Match: RD19B_ARATH (Probable cysteine protease RD19B OS=Arabidopsis thaliana GN=RD19B PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAAT 239
           GE+WGENG+Y ICKG N CG +S+VS+VAAT
Sbjct: 329 GESWGENGFYKICKGRNICGVDSLVSTVAAT 359

[Close]

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.1e-06
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAA 238
           G+NWGE GYY IC+G N CG +SMVS+VAA
Sbjct: 329 GQNWGEQGYYKICRGRNVCGVDSMVSTVAA 358

[Close]

BLAST of Cp4.1LG11g02250 vs. TrEMBL
Match: A0A0A0LPD9_CUCSA (Cysteine protease OS=Cucumis sativus GN=Csa_2G363570 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-16
Identity = 60/145 (41.38%), Postives = 70/145 (48.28%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGLER+EDYP TG  RG CKFQ+G K+    A                      A+G++
Sbjct: 227 AGGLEREEDYPYTGTDRGSCKFQNG-KIAASAANFSVISNDADQIAANLVKNGPLAIGIN 286

Query: 216 AIFLQTNVRGISC---------------VG------------------------ENWGEN 240
           A+F+QT ++GISC               VG                        ENWGEN
Sbjct: 287 AVFMQTYMKGISCPYICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGEN 346

[Close]

BLAST of Cp4.1LG11g02250 vs. TrEMBL
Match: A0A0L9VAD4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g028300 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-14
Identity = 89/329 (27.05%), Postives = 128/329 (38.91%), Query Frame = 1


Query: 24  FFTILLSATVAY----DVSSDLMYGG---DSEDEDLSSPYRLAKNFQNSELKFGKAYAID 83
           F  +L SAT+A     D   DL+      D+E+  L++ +    +F   + KFG+ YA  
Sbjct: 10  FSLLLFSATLAIAERIDGEDDLLIRQVVPDAEEHLLNAEH----HFSAFKAKFGRTYATQ 69

Query: 84  EEHDYRF-------------RSQAPAGARSWRR-------PWRHVVIRSHRVLVPYTFRR 143
           EEHD+RF             +   P+      +        +R   +    +L+P   ++
Sbjct: 70  EEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTKFSDLTPAEFRRQFLGLKPLLLPTDAQK 129

Query: 144 SESAPSFCRFSE---------------GSDPSYWRPSLLLRLTLPRFRPAGQ-------- 203
           +   P+    S+               GS  S W  S +  L    F   G+        
Sbjct: 130 APILPTNDLPSDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQ 189

Query: 204 -----RAAGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA-------------------- 238
                  AGGL R+ DYP TGR RGPCKF    K+    A                    
Sbjct: 190 LVDCDHEAGGLMRENDYPYTGRDRGPCKFDKS-KIAASVANFSVVSLDEEQIAANLVKNG 249

[Close]

BLAST of Cp4.1LG11g02250 vs. TrEMBL
Match: A0A0D2TMT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G197400 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 51/142 (35.92%), Postives = 64/142 (45.07%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGLER++DYP TG   GPCKF    K+    +                      AVG++
Sbjct: 224 AGGLEREKDYPYTGNAGGPCKFDK-TKIAASVSNFSVISIDEDQIAANLVKHGPLAVGIN 283

Query: 216 AIFLQTNVRGISCV--------------------------------------GENWGENG 238
           A+F+QT + G+SC                                       GENWGENG
Sbjct: 284 AVFMQTYIHGVSCPYICGKHLDHGVLLVGYGSAGYAPVRFKNKPYWIIKNSWGENWGENG 343

[Close]

BLAST of Cp4.1LG11g02250 vs. TrEMBL
Match: B9R826_RICCO (Cysteine protease, putative OS=Ricinus communis GN=RCOM_1596200 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 50/141 (35.46%), Postives = 64/141 (45.39%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQ---------------------SGIKMPTKTAAVGVDA 215
           AGGLER+EDYP TG  RGPCKF+                     +   +     AVG++A
Sbjct: 220 AGGLEREEDYPYTGSDRGPCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINA 279

Query: 216 IFLQTNVRGISCV--------------------------------------GENWGENGY 238
           +F+QT + G+SC                                       GENWGENGY
Sbjct: 280 VFMQTYIGGVSCPYICSKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGY 339

[Close]

BLAST of Cp4.1LG11g02250 vs. TrEMBL
Match: A0A0S3RB48_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G031900 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12
Identity = 51/142 (35.92%), Postives = 64/142 (45.07%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGL R+ DYP TGR RGPCKF    K+    A                      AVG++
Sbjct: 220 AGGLMRENDYPYTGRDRGPCKFDKS-KIAASVANFSVVSLDEEQIAANLVKNGPLAVGIN 279

Query: 216 AIFLQTNVRGISCV--------------------------------------GENWGENG 238
           A+F+QT + G+SC                                       GE+WGENG
Sbjct: 280 AVFMQTYIGGVSCPYICGKHLDHGVLLVGYGAGAYAPIRLKEKPFWIIKNSWGESWGENG 339

[Close]

BLAST of Cp4.1LG11g02250 vs. TAIR10
Match: AT4G39090.1 (AT4G39090.1 Papain family cysteine protease)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAAT 239
           GE WGENG+Y ICKG N CG +SMVS+VAAT
Sbjct: 332 GETWGENGFYKICKGRNICGVDSMVSTVAAT 362

[Close]

BLAST of Cp4.1LG11g02250 vs. TAIR10
Match: AT2G21430.1 (AT2G21430.1 Papain family cysteine protease)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 1


Query: 208 GENWGENGYYLICKGNNTCGSESMVSSVAAT 239
           GE+WGENG+Y ICKG N CG +S+VS+VAAT
Sbjct: 329 GESWGENGFYKICKGRNICGVDSLVSTVAAT 359

[Close]

BLAST of Cp4.1LG11g02250 vs. TAIR10
Match: AT3G54940.2 (AT3G54940.2 Papain family cysteine protease)

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06
Identity = 28/87 (32.18%), Postives = 40/87 (45.98%), Query Frame = 1


Query: 189 AVGVDAIFLQTNVRGISCV---------------------------------------GE 237
           AVG++A+F+QT + G+SC                                        G+
Sbjct: 276 AVGLNAVFMQTYIGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGK 335

[Close]

BLAST of Cp4.1LG11g02250 vs. TAIR10
Match: AT4G16190.1 (AT4G16190.1 Papain family cysteine protease)

HSP 1 Score: 48.1 bits (113), Expect = 8.6e-06
Identity = 39/142 (27.46%), Postives = 53/142 (37.32%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSG--IKMPTKTAAVGVDAIFLQTN------------- 215
           AGGL ++EDYP TGR    CKF     +   +  + V  D   +  N             
Sbjct: 226 AGGLMKEEDYPYTGRDHTACKFDKSKIVASVSNFSVVSSDEDQIAANLVQHGPLAIAINA 285

Query: 216 ------VRGISCV--------------------------------------GENWGENGY 238
                 + G+SC                                       G  WGE+GY
Sbjct: 286 MWMQTYIGGVSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGY 345

[Close]

BLAST of Cp4.1LG11g02250 vs. NCBI nr
Match: gi|659088039|ref|XP_008444769.1| (PREDICTED: cysteine proteinase RD19a-like [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 60/148 (40.54%), Postives = 71/148 (47.97%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGLER+EDYP TG  RG CKFQ+G K+    A                      A+G++
Sbjct: 227 AGGLEREEDYPYTGTDRGSCKFQNG-KIAASAANFSVISNDADQIAANLVKNGPLAIGIN 286

Query: 216 AIFLQTNVRGISCV---------------------------------------GENWGEN 241
           A+F+QT ++G+SC                                        GENWGEN
Sbjct: 287 AVFMQTYMKGVSCPYICSKRNLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGENWGEN 346

[Close]

BLAST of Cp4.1LG11g02250 vs. NCBI nr
Match: gi|449469923|ref|XP_004152668.1| (PREDICTED: cysteine proteinase RD19a [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 3.0e-16
Identity = 60/145 (41.38%), Postives = 70/145 (48.28%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGLER+EDYP TG  RG CKFQ+G K+    A                      A+G++
Sbjct: 227 AGGLEREEDYPYTGTDRGSCKFQNG-KIAASAANFSVISNDADQIAANLVKNGPLAIGIN 286

Query: 216 AIFLQTNVRGISC---------------VG------------------------ENWGEN 240
           A+F+QT ++GISC               VG                        ENWGEN
Sbjct: 287 AVFMQTYMKGISCPYICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGEN 346

[Close]

BLAST of Cp4.1LG11g02250 vs. NCBI nr
Match: gi|920710375|gb|KOM51624.1| (hypothetical protein LR48_Vigan09g028300 [Vigna angularis])

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 89/329 (27.05%), Postives = 128/329 (38.91%), Query Frame = 1


Query: 24  FFTILLSATVAY----DVSSDLMYGG---DSEDEDLSSPYRLAKNFQNSELKFGKAYAID 83
           F  +L SAT+A     D   DL+      D+E+  L++ +    +F   + KFG+ YA  
Sbjct: 10  FSLLLFSATLAIAERIDGEDDLLIRQVVPDAEEHLLNAEH----HFSAFKAKFGRTYATQ 69

Query: 84  EEHDYRF-------------RSQAPAGARSWRR-------PWRHVVIRSHRVLVPYTFRR 143
           EEHD+RF             +   P+      +        +R   +    +L+P   ++
Sbjct: 70  EEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTKFSDLTPAEFRRQFLGLKPLLLPTDAQK 129

Query: 144 SESAPSFCRFSE---------------GSDPSYWRPSLLLRLTLPRFRPAGQ-------- 203
           +   P+    S+               GS  S W  S +  L    F   G+        
Sbjct: 130 APILPTNDLPSDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQ 189

Query: 204 -----RAAGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA-------------------- 238
                  AGGL R+ DYP TGR RGPCKF    K+    A                    
Sbjct: 190 LVDCDHEAGGLMRENDYPYTGRDRGPCKFDKS-KIAASVANFSVVSLDEEQIAANLVKNG 249

[Close]

BLAST of Cp4.1LG11g02250 vs. NCBI nr
Match: gi|255538808|ref|XP_002510469.1| (PREDICTED: probable cysteine proteinase A494 [Ricinus communis])

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13
Identity = 50/141 (35.46%), Postives = 64/141 (45.39%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQ---------------------SGIKMPTKTAAVGVDA 215
           AGGLER+EDYP TG  RGPCKF+                     +   +     AVG++A
Sbjct: 220 AGGLEREEDYPYTGSDRGPCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINA 279

Query: 216 IFLQTNVRGISCV--------------------------------------GENWGENGY 238
           +F+QT + G+SC                                       GENWGENGY
Sbjct: 280 VFMQTYIGGVSCPYICSKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGY 339

[Close]

BLAST of Cp4.1LG11g02250 vs. NCBI nr
Match: gi|823230349|ref|XP_012447901.1| (PREDICTED: cysteine proteinase 15A-like [Gossypium raimondii])

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13
Identity = 51/142 (35.92%), Postives = 64/142 (45.07%), Query Frame = 1


Query: 156 AGGLERQEDYPSTGRYRGPCKFQSGIKMPTKTA----------------------AVGVD 215
           AGGLER++DYP TG   GPCKF    K+    +                      AVG++
Sbjct: 224 AGGLEREKDYPYTGNAGGPCKFDK-TKIAASVSNFSVISIDEDQIAANLVKHGPLAVGIN 283

Query: 216 AIFLQTNVRGISCV--------------------------------------GENWGENG 238
           A+F+QT + G+SC                                       GENWGENG
Sbjct: 284 AVFMQTYIHGVSCPYICGKHLDHGVLLVGYGSAGYAPVRFKNKPYWIIKNSWGENWGENG 343

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYSP1_MAIZE	7.8e-09	31.25	Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1	[more]
PAPA5_CARPA	9.6e-07	76.67	Cysteine proteinase (Fragment) OS=Carica papaya PE=2 SV=1	[more]
RD19A_ARATH	2.1e-06	74.19	Cysteine protease RD19A OS=Arabidopsis thaliana GN=RD19A PE=1 SV=1	[more]
RD19B_ARATH	3.6e-06	70.97	Probable cysteine protease RD19B OS=Arabidopsis thaliana GN=RD19B PE=2 SV=2	[more]
CYSP_PEA	8.1e-06	70.00	Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1	[more]

BLAST of Cp4.1LG11g02250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPD9_CUCSA	2.1e-16	41.38	Cysteine protease OS=Cucumis sativus GN=Csa_2G363570 PE=3 SV=1	[more]
A0A0L9VAD4_PHAAN	7.4e-14	27.05	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g028300 PE=3 SV=1	[more]
A0A0D2TMT5_GOSRA	2.1e-13	35.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G197400 PE=3 SV=1	[more]
B9R826_RICCO	2.1e-13	35.46	Cysteine protease, putative OS=Ricinus communis GN=RCOM_1596200 PE=3 SV=1	[more]
A0A0S3RB48_PHAAN	1.1e-12	35.92	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G031900 PE=...	[more]

BLAST of Cp4.1LG11g02250 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39090.1	1.2e-07	74.19	Papain family cysteine protease	[more]
AT2G21430.1	2.1e-07	70.97	Papain family cysteine protease	[more]
AT3G54940.2	1.0e-06	32.18	Papain family cysteine protease	[more]
AT4G16190.1	8.6e-06	27.46	Papain family cysteine protease	[more]

BLAST of Cp4.1LG11g02250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088039\|ref\|XP_008444769.1\|	1.0e-16	40.54	PREDICTED: cysteine proteinase RD19a-like [Cucumis melo]	[more]
gi\|449469923\|ref\|XP_004152668.1\|	3.0e-16	41.38	PREDICTED: cysteine proteinase RD19a [Cucumis sativus]	[more]
gi\|920710375\|gb\|KOM51624.1\|	1.1e-13	27.05	hypothetical protein LR48_Vigan09g028300 [Vigna angularis]	[more]
gi\|255538808\|ref\|XP_002510469.1\|	3.1e-13	35.46	PREDICTED: probable cysteine proteinase A494 [Ricinus communis]	[more]
gi\|823230349\|ref\|XP_012447901.1\|	3.1e-13	35.92	PREDICTED: cysteine proteinase 15A-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008234	cysteine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02250.1	Cp4.1LG11g02250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.40.50.170		coord: 208..235 score: 6.
None	No IPR available	unknown	SSF54001	Cysteine proteinases	coord: 208..236 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g02250	MELO3C010982.2	Melon (DHL92) v3.6.1	cpemedB115
Cp4.1LG11g02250	CsaV3_2G029200	Cucumber (Chinese Long) v3	cpecucB0106
Cp4.1LG11g02250	Bhi04G000197	Wax gourd	cpewgoB0134
Cp4.1LG11g02250	CsGy2G020280	Cucumber (Gy14) v2	cgybcpeB161
Cp4.1LG11g02250	Carg04017	Silver-seed gourd	carcpeB1352

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g02250	Cp4.1LG07g03900	Cucurbita pepo (Zucchini)	cpecpeB146

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g02250	Cucurbita pepo (Zucchini)	cpecpeB061
Cp4.1LG11g02250	Cucurbita pepo (Zucchini)	cpecpeB110
Cp4.1LG11g02250	Cucurbita pepo (Zucchini)	cpecpeB112
Cp4.1LG11g02250	Cucurbita pepo (Zucchini)	cpecpeB125
Cp4.1LG11g02250	Cucurbita pepo (Zucchini)	cpecpeB136
Cp4.1LG11g02250	Cucumber (Gy14) v1	cgycpeB0877
Cp4.1LG11g02250	Cucurbita maxima (Rimu)	cmacpeB030
Cp4.1LG11g02250	Cucurbita maxima (Rimu)	cmacpeB179
Cp4.1LG11g02250	Cucurbita maxima (Rimu)	cmacpeB461
Cp4.1LG11g02250	Cucurbita maxima (Rimu)	cmacpeB766
Cp4.1LG11g02250	Cucurbita moschata (Rifu)	cmocpeB006
Cp4.1LG11g02250	Cucurbita moschata (Rifu)	cmocpeB154
Cp4.1LG11g02250	Cucurbita moschata (Rifu)	cmocpeB421
Cp4.1LG11g02250	Cucurbita moschata (Rifu)	cmocpeB720
Cp4.1LG11g02250	Wild cucumber (PI 183967)	cpecpiB092
Cp4.1LG11g02250	Wild cucumber (PI 183967)	cpecpiB106
Cp4.1LG11g02250	Wild cucumber (PI 183967)	cpecpiB114
Cp4.1LG11g02250	Cucumber (Chinese Long) v2	cpecuB096
Cp4.1LG11g02250	Cucumber (Chinese Long) v2	cpecuB110
Cp4.1LG11g02250	Bottle gourd (USVL1VR-Ls)	cpelsiB086
Cp4.1LG11g02250	Bottle gourd (USVL1VR-Ls)	cpelsiB100
Cp4.1LG11g02250	Watermelon (Charleston Gray)	cpewcgB114
Cp4.1LG11g02250	Watermelon (Charleston Gray)	cpewcgB125
Cp4.1LG11g02250	Watermelon (97103) v1	cpewmB101
Cp4.1LG11g02250	Watermelon (97103) v1	cpewmB109
Cp4.1LG11g02250	Melon (DHL92) v3.5.1	cpemeB091
Cp4.1LG11g02250	Melon (DHL92) v3.5.1	cpemeB095
Cp4.1LG11g02250	Cucumber (Gy14) v2	cgybcpeB296
Cp4.1LG11g02250	Cucumber (Gy14) v2	cgybcpeB479
Cp4.1LG11g02250	Cucumber (Gy14) v2	cgybcpeB716
Cp4.1LG11g02250	Cucumber (Gy14) v2	cgybcpeB897
Cp4.1LG11g02250	Melon (DHL92) v3.6.1	cpemedB119
Cp4.1LG11g02250	Melon (DHL92) v3.6.1	cpemedB134
Cp4.1LG11g02250	Silver-seed gourd	carcpeB0152
Cp4.1LG11g02250	Silver-seed gourd	carcpeB0263
Cp4.1LG11g02250	Silver-seed gourd	carcpeB1307
Cp4.1LG11g02250	Cucumber (Chinese Long) v3	cpecucB0121
Cp4.1LG11g02250	Cucumber (Chinese Long) v3	cpecucB0133
Cp4.1LG11g02250	Cucumber (Chinese Long) v3	cpecucB0139
Cp4.1LG11g02250	Wax gourd	cpewgoB0153
Cp4.1LG11g02250	Wax gourd	cpewgoB0162
Cp4.1LG11g02250	Wax gourd	cpewgoB0165