Cp4.1LG10g12030 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g12030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionzinc finger (C3HC4-type RING finger) family protein
LocationCp4.1LG10 : 8118696 .. 8119346 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACCCCAACACTCTGTCTCTCCAATATTGCATCCACACCCACCCCCTCAACACCACCGGCGTAGCCACCGACGCCCAACCCATGCAATACGCCGAGCTCCGATTAGCCTATTCCAACCAATTCGTCTCTCGATCCTCCAACCAACTCCTCCAACAAACCCCCGAAACCCCAATCTCCGATACTCTCTTACCTCTGTTTCTCCGAGACCTTCAACACCCGCCGTTCCTTTCCCACTTCTTACTCCTTCAATTTCTCTCTACCTTCAACATCTCCACCGCCACCTCCGACGCCATTTTCGATGACATCGCCACATTCGCCCTGGAATTGGCCGCCGGCGACCACGATCGGAACTTCCACATTATCGTCTATCTCGATTTAGTCCAGACGATCTGGGTGGACCTGGACCTGGAAATCCCTCGGAAACAAGAACCGGCGGCGGCGTGGGTGATGGAGAGGGTGATGAGGGAGGAATTTGATGGGTTTCGGGCGGAGGAGGCGGGAGATTGCAGCGTTTGTTGCGATGAGCTCCGTGGTGAAACGGAGGTGAGGCGACTCCCCTGCGGTCACGTCTTCCATAAATCCTGTATCCTCAACTGGCTTCAACTCACTAATTCCTGCCCTTTGTGCAGAGCAAAATTAGAATAA

mRNA sequence

ATGGCTAACCCCAACACTCTGTCTCTCCAATATTGCATCCACACCCACCCCCTCAACACCACCGGCGTAGCCACCGACGCCCAACCCATGCAATACGCCGAGCTCCGATTAGCCTATTCCAACCAATTCGTCTCTCGATCCTCCAACCAACTCCTCCAACAAACCCCCGAAACCCCAATCTCCGATACTCTCTTACCTCTGTTTCTCCGAGACCTTCAACACCCGCCGTTCCTTTCCCACTTCTTACTCCTTCAATTTCTCTCTACCTTCAACATCTCCACCGCCACCTCCGACGCCATTTTCGATGACATCGCCACATTCGCCCTGGAATTGGCCGCCGGCGACCACGATCGGAACTTCCACATTATCGTCTATCTCGATTTAGTCCAGACGATCTGGGTGGACCTGGACCTGGAAATCCCTCGGAAACAAGAACCGGCGGCGGCGTGGGTGATGGAGAGGGTGATGAGGGAGGAATTTGATGGGTTTCGGGCGGAGGAGGCGGGAGATTGCAGCGTTTGTTGCGATGAGCTCCGTGGTGAAACGGAGGTGAGGCGACTCCCCTGCGGTCACGTCTTCCATAAATCCTGTATCCTCAACTGGCTTCAACTCACTAATTCCTGCCCTTTGTGCAGAGCAAAATTAGAATAA

Coding sequence (CDS)

ATGGCTAACCCCAACACTCTGTCTCTCCAATATTGCATCCACACCCACCCCCTCAACACCACCGGCGTAGCCACCGACGCCCAACCCATGCAATACGCCGAGCTCCGATTAGCCTATTCCAACCAATTCGTCTCTCGATCCTCCAACCAACTCCTCCAACAAACCCCCGAAACCCCAATCTCCGATACTCTCTTACCTCTGTTTCTCCGAGACCTTCAACACCCGCCGTTCCTTTCCCACTTCTTACTCCTTCAATTTCTCTCTACCTTCAACATCTCCACCGCCACCTCCGACGCCATTTTCGATGACATCGCCACATTCGCCCTGGAATTGGCCGCCGGCGACCACGATCGGAACTTCCACATTATCGTCTATCTCGATTTAGTCCAGACGATCTGGGTGGACCTGGACCTGGAAATCCCTCGGAAACAAGAACCGGCGGCGGCGTGGGTGATGGAGAGGGTGATGAGGGAGGAATTTGATGGGTTTCGGGCGGAGGAGGCGGGAGATTGCAGCGTTTGTTGCGATGAGCTCCGTGGTGAAACGGAGGTGAGGCGACTCCCCTGCGGTCACGTCTTCCATAAATCCTGTATCCTCAACTGGCTTCAACTCACTAATTCCTGCCCTTTGTGCAGAGCAAAATTAGAATAA

Protein sequence

MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPISDTLLPLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDRNFHIIVYLDLVQTIWVDLDLEIPRKQEPAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE
Homology
[Close]
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.8e-12
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 1 

Query: 111 LAAGDHDRNFHIIVYLDLVQTIWVDLDLEIPRKQEPAAAWVMERVMREEFDGFRAEEAGD 170
           L A D  RN   +  L ++  I  D+++E+P   + A   ++E  + E     +++E GD
Sbjct: 16  LGANDLARNLKRLQVLAIMNGI--DMEIEVPEASKRA---ILELPVHEIV---KSDEGGD 75

Query: 171 --CSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE 217
             CSVC +      + R LPC H FH+ CIL WL+ TNSCPLCR +LE
Sbjct: 76  LECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELE 115

[Close]
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-11
Identity = 38/90 (42.22%), Postives = 50/90 (55.56%), Query Frame = 1 

Query: 126 LDLVQTIWVDLDLEIPRKQEPAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVR 185
           +DL    + + D  +P    PAA  V+E + +      +A+ A  C VC  E      VR
Sbjct: 37  IDLGALDFTEWDQRLP---PPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVR 96

Query: 186 RLPCGHVFHKSCILNWLQLTNSCPLCRAKL 216
           +LPC H+FH SCIL WL  TNSCPLCR +L
Sbjct: 97  QLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123

[Close]
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.4e-11
Identity = 38/82 (46.34%), Postives = 45/82 (54.88%), Query Frame = 1 

Query: 134 VDLDLEIPRKQEPAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVRRLPCGHVF 193
           VD D  +P    PAA  V+E + R    G +AE    C VC  E   E     +PC H+F
Sbjct: 44  VDWDHHLP---PPAAKTVVENLPRTVIRGSQAELK--CPVCLLEFEEEETAIEMPCHHLF 103

Query: 194 HKSCILNWLQLTNSCPLCRAKL 216
           H SCIL WL  TNSCPLCR +L
Sbjct: 104 HSSCILPWLSKTNSCPLCRYEL 120

[Close]
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-11
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 1 

Query: 146 PAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLT 205
           PA+   +E + R E          +C+VC +    ETE R +PC H+FH  CI+ WL + 
Sbjct: 174 PASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIR 233

Query: 206 NSCPLCRAKL 216
           NSCP+CR +L
Sbjct: 234 NSCPVCRFEL 243

[Close]
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.8e-11
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 1 

Query: 167 EAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKL 216
           E   C+VC DE    ++V+++PC HVFH+ C+L WL+L NSCP+CR +L
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 111/224 (49.55%), Postives = 150/224 (66.96%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTG-VATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETP 60
           M++P T S +  I     N  G  AT+ QP+Q+ ELRL + +Q V   S+Q+LQQT    
Sbjct: 1   MSSPTTFSFRCSIRC---NANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPIL 60

Query: 61  ISDTLLPLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDRN 120
           ISDTL+   LR+L+ PPF+SH  L +FLS++NIS A  DAIF  I++FA +L AG+ + N
Sbjct: 61  ISDTLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSN 120

Query: 121 FHIIVYLDLVQTIWVDLD--LEIPRKQEPAAAWVMERVMREEFDGFRAEEAGD-CSVCCD 180
           FHII  LD V T WVDLD   +    ++ A    +ER+M+E++DG   EE  D CSVC +
Sbjct: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180

Query: 181 ELRGET----EVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE 217
           +L G+T    EV R+PCGH+FHKSCIL WL+++NSCPLCR +LE
Sbjct: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELE 221

[Close]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match: A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-46
Identity = 111/232 (47.84%), Postives = 153/232 (65.95%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPI 60
           M+ P T S Q  I  +    + +ATD QP+Q+ +LRL +  Q V   S Q+LQQT  T I
Sbjct: 1   MSLPITFSFQCSIRRN--GKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLI 60

Query: 61  SDTLLPLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFA---LELAAGDHD 120
           SDTL+P  L +L+ PPF+S+F L +FLS+++IS A  DAIF +I++FA   L  A  + +
Sbjct: 61  SDTLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNIN 120

Query: 121 RNFHIIVYLDLVQTIWVDLD--LEIPRKQEPAAAWVMERVMREEFDGFRAEE-AGD--CS 180
            NFHII  +D+V T WVDLD   + P  ++ A+  V+ERVM+E++DG   EE  GD  CS
Sbjct: 121 VNFHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCS 180

Query: 181 VCCDELRG--------ETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE 217
           VC ++L G        E EV R+PCGH++HKSCIL WL+++NSCPLCR +LE
Sbjct: 181 VCYEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

[Close]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match: A0A0A0LHI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889100 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32
Identity = 95/226 (42.04%), Postives = 129/226 (57.08%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPI 60
           M++   LSL  C+ + P             Q  E+RL   ++ VS  SNQ +QQT  T I
Sbjct: 1   MSSTTNLSLDCCVRSIPTTAD--------KQLVEIRLRRFSKLVSPFSNQNIQQTFPTSI 60

Query: 61  SDTLLPLFLRDLQ-HPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDRN 120
           S+ L    L +L+   P L H  LLQFLS      A S AIF +I++FAL+LAAG+ + N
Sbjct: 61  SNALFHFPLPELELENPSLFHDFLLQFLSP-----ADSAAIFHNISSFALQLAAGNLNLN 120

Query: 121 FHIIVYLDLVQTIWVDLDLEIPRKQEPAA----AWVMERVMREEFDGFRAEEA--GDCSV 180
           FH+I  +DL+ TI ++L+L  P+   P      A VMER+M E++D     E   G C V
Sbjct: 121 FHLIATVDLLYTISINLNLNPPQYSPPVRNGVPASVMERLMNEKYDDGNGGEGMGGQCCV 180

Query: 181 CCDELRGETE-----VRRLPCGHVFHKSCILNWLQLTNSCPLCRAK 215
           C ++L  E E       R+PCGHV+HKSCIL WL + NSCPLCR++
Sbjct: 181 CYEDLNCEREEEKEEATRIPCGHVYHKSCILKWLNVNNSCPLCRSE 213

[Close]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 75/206 (36.41%), Postives = 120/206 (58.25%), Query Frame = 1 

Query: 35  LRLAYSNQFVSRS------SNQLLQQTPETPISDTLLPLFLRDLQHPPFLSH--FLLLQF 94
           +RL + ++ +S+S       + +L+QTP T I + L  L   +LQ+P       +++ +F
Sbjct: 25  VRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEALFSL--SNLQYPLQQQELEYMVNEF 84

Query: 95  LSTFNISTATSDAIFDDIATFALELAAGDHDRNFHIIVYLDLVQTIWVDLDLEI------ 154
           L +FN+ ++    +  +I +FA +     ++  F I   +D ++  W +   E+      
Sbjct: 85  LRSFNLRSSVCRIVSHNILSFAQQFDI--NNECFKIETNVDYIKEYWTEAAPELYPISTV 144

Query: 155 ------PRKQEPAAAWVMERVMREEFDGFRAEEA---GDCSVCCDELRGET-EVRRLPCG 214
                 PR    +A   +ERV +++FDGFR EE    GDCSVCC+E++ +  EVRR+PCG
Sbjct: 145 GEEGLPPRGASESA---IERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGGEVRRIPCG 204

Query: 215 HVFHKSCILNWLQLTNSCPLCRAKLE 217
           HV+HKSCIL WL+++NSCPLCRA LE
Sbjct: 205 HVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-22
Identity = 74/202 (36.63%), Postives = 104/202 (51.49%), Query Frame = 1 

Query: 34  ELRLAYSNQFVSRSS-----NQLLQQTPETPISDTLLPLFLRDLQHPPFLSHFLLLQFLS 93
           ++ +++  Q +S S      +++L QTP  P  + L  L LR LQ P F     + Q LS
Sbjct: 25  QVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFY----ITQILS 84

Query: 94  TFNISTATSDAIFDDIATFALELAAGDHDRNFHIIVYLDLVQTIW--------------V 153
           + NI  A S  +   IA+  L++   + + NFHI+  +D ++ IW              V
Sbjct: 85  SLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETV 144

Query: 154 DLDLEIPRKQEPAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGET-EVRRLPCGHVF 213
            LD   P  +        ER+  EE    + EE GDCS+C DEL  E  EV R+PCGHV+
Sbjct: 145 VLDEAPPAVKRGVGVARGERLRSEE----KMEELGDCSICLDELSCEKREVMRIPCGHVY 204

Query: 214 HKSCILNWLQLTNSCPLCRAKL 216
           H+SCI  WL+  NSCPLCR  L
Sbjct: 205 HESCIFKWLENHNSCPLCRKPL 218

[Close]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 1 

Query: 167 EAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKL 216
           E   C+VC DE    ++V+++PC HVFH+ C+L WL+L NSCP+CR +L
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match: AT5G59550.1 (AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 1 

Query: 146 PAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLT 205
           PA+   +E + R E          +C+VC +    ETE R +PC H+FH  CI+ WL + 
Sbjct: 174 PASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIR 233

Query: 206 NSCPLCRAKL 216
           NSCP+CR +L
Sbjct: 234 NSCPVCRFEL 243

[Close]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-11
Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 1 

Query: 146 PAAAWVMERVMREEFDGFRAEEAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLT 205
           PA+   +E + R E      +   +C+VC +      E R +PC H+FH  CI+ WL + 
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249

Query: 206 NSCPLCRAKL 216
           NSCP+CR +L
Sbjct: 250 NSCPVCRFEL 259

[Close]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match: AT3G02340.1 (AT3G02340.1 RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-11
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1 

Query: 171 CSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKL 216
           C+VC DE+  E +VRRLPC H +H  CI+ WL + N+CP+CR +L
Sbjct: 335 CAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYEL 379

[Close]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 1 

Query: 164 RAEEAGDCSVCCDELRGETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKL 216
           + EE   CSVC D+    TE + +PC H FH  C+L WL+L +SCP+CR +L
Sbjct: 216 KIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267

[Close]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match: gi|778674460|ref|XP_011650219.1| (PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 111/224 (49.55%), Postives = 150/224 (66.96%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTG-VATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETP 60
           M++P T S +  I     N  G  AT+ QP+Q+ ELRL + +Q V   S+Q+LQQT    
Sbjct: 1   MSSPTTFSFRCSIRC---NANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPIL 60

Query: 61  ISDTLLPLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDRN 120
           ISDTL+   LR+L+ PPF+SH  L +FLS++NIS A  DAIF  I++FA +L AG+ + N
Sbjct: 61  ISDTLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSN 120

Query: 121 FHIIVYLDLVQTIWVDLD--LEIPRKQEPAAAWVMERVMREEFDGFRAEEAGD-CSVCCD 180
           FHII  LD V T WVDLD   +    ++ A    +ER+M+E++DG   EE  D CSVC +
Sbjct: 121 FHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCYE 180

Query: 181 ELRGET----EVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE 217
           +L G+T    EV R+PCGH+FHKSCIL WL+++NSCPLCR +LE
Sbjct: 181 DLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELE 221

[Close]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match: gi|700199693|gb|KGN54851.1| (hypothetical protein Csa_4G551140 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 111/232 (47.84%), Postives = 153/232 (65.95%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPI 60
           M+ P T S Q  I  +    + +ATD QP+Q+ +LRL +  Q V   S Q+LQQT  T I
Sbjct: 1   MSLPITFSFQCSIRRN--GKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLI 60

Query: 61  SDTLLPLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFA---LELAAGDHD 120
           SDTL+P  L +L+ PPF+S+F L +FLS+++IS A  DAIF +I++FA   L  A  + +
Sbjct: 61  SDTLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNIN 120

Query: 121 RNFHIIVYLDLVQTIWVDLD--LEIPRKQEPAAAWVMERVMREEFDGFRAEE-AGD--CS 180
            NFHII  +D+V T WVDLD   + P  ++ A+  V+ERVM+E++DG   EE  GD  CS
Sbjct: 121 VNFHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQCS 180

Query: 181 VCCDELRG--------ETEVRRLPCGHVFHKSCILNWLQLTNSCPLCRAKLE 217
           VC ++L G        E EV R+PCGH++HKSCIL WL+++NSCPLCR +LE
Sbjct: 181 VCYEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

[Close]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match: gi|659132530|ref|XP_008466247.1| (PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo])

HSP 1 Score: 176.4 bits (446), Expect = 5.4e-41
Identity = 112/226 (49.56%), Postives = 145/226 (64.16%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPI 60
           M++  TLSL+ CIH+       VAT A   Q  E+RL   ++ VS SSNQ++QQT  TPI
Sbjct: 1   MSSTTTLSLECCIHS------SVATTADE-QLVEIRLRRYSKLVSPSSNQIIQQTFPTPI 60

Query: 61  SDTLL--PLFLRDLQHPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDR 120
           SD L   PL   +L++PPF  H LLLQFLS      A S AIF +I++FAL+LAAG+ + 
Sbjct: 61  SDALFHFPLPELELENPPFFFHDLLLQFLSP-----ADSTAIFHNISSFALQLAAGNLNL 120

Query: 121 NFHIIVYLDLVQTIWVDLDLEIPRK----QEPAAAWVMERVMREEFD-GFRAEEAGD-CS 180
           NFH+I  +DL+ TI VDLDL+ P+     +  A A V+ER+M E++D G   EE GD C 
Sbjct: 121 NFHLIATVDLLYTISVDLDLDPPQYSPLVRNGAPASVIERLMDEKYDDGNGREEMGDQCC 180

Query: 181 VCCDELR------GETEVRRLPCGHVFHKSCILNWLQLTNSCPLCR 213
           VC ++L        E EV R+PCGHV+HK CIL WL + NSCPLCR
Sbjct: 181 VCYEDLNCEREEEKEEEVTRIPCGHVYHKYCILKWLNINNSCPLCR 214

[Close]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match: gi|778689036|ref|XP_011652885.1| (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 2.7e-32
Identity = 95/226 (42.04%), Postives = 129/226 (57.08%), Query Frame = 1 

Query: 1   MANPNTLSLQYCIHTHPLNTTGVATDAQPMQYAELRLAYSNQFVSRSSNQLLQQTPETPI 60
           M++   LSL  C+ + P             Q  E+RL   ++ VS  SNQ +QQT  T I
Sbjct: 1   MSSTTNLSLDCCVRSIPTTAD--------KQLVEIRLRRFSKLVSPFSNQNIQQTFPTSI 60

Query: 61  SDTLLPLFLRDLQ-HPPFLSHFLLLQFLSTFNISTATSDAIFDDIATFALELAAGDHDRN 120
           S+ L    L +L+   P L H  LLQFLS      A S AIF +I++FAL+LAAG+ + N
Sbjct: 61  SNALFHFPLPELELENPSLFHDFLLQFLSP-----ADSAAIFHNISSFALQLAAGNLNLN 120

Query: 121 FHIIVYLDLVQTIWVDLDLEIPRKQEPAA----AWVMERVMREEFDGFRAEEA--GDCSV 180
           FH+I  +DL+ TI ++L+L  P+   P      A VMER+M E++D     E   G C V
Sbjct: 121 FHLIATVDLLYTISINLNLNPPQYSPPVRNGVPASVMERLMNEKYDDGNGGEGMGGQCCV 180

Query: 181 CCDELRGETE-----VRRLPCGHVFHKSCILNWLQLTNSCPLCRAK 215
           C ++L  E E       R+PCGHV+HKSCIL WL + NSCPLCR++
Sbjct: 181 CYEDLNCEREEEKEEATRIPCGHVYHKSCILKWLNVNNSCPLCRSE 213

[Close]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match: gi|449442467|ref|XP_004139003.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 75/206 (36.41%), Postives = 120/206 (58.25%), Query Frame = 1 

Query: 35  LRLAYSNQFVSRS------SNQLLQQTPETPISDTLLPLFLRDLQHPPFLSH--FLLLQF 94
           +RL + ++ +S+S       + +L+QTP T I + L  L   +LQ+P       +++ +F
Sbjct: 25  VRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEALFSL--SNLQYPLQQQELEYMVNEF 84

Query: 95  LSTFNISTATSDAIFDDIATFALELAAGDHDRNFHIIVYLDLVQTIWVDLDLEI------ 154
           L +FN+ ++    +  +I +FA +     ++  F I   +D ++  W +   E+      
Sbjct: 85  LRSFNLRSSVCRIVSHNILSFAQQFDI--NNECFKIETNVDYIKEYWTEAAPELYPISTV 144

Query: 155 ------PRKQEPAAAWVMERVMREEFDGFRAEEA---GDCSVCCDELRGET-EVRRLPCG 214
                 PR    +A   +ERV +++FDGFR EE    GDCSVCC+E++ +  EVRR+PCG
Sbjct: 145 GEEGLPPRGASESA---IERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGGEVRRIPCG 204

Query: 215 HVFHKSCILNWLQLTNSCPLCRAKLE 217
           HV+HKSCIL WL+++NSCPLCRA LE
Sbjct: 205 HVYHKSCILKWLEISNSCPLCRAALE 223

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g12030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN181_DROME6.8e-1238.89E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 ... [more]
RN181_XENTR2.6e-1142.22E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1[more]
RN181_HUMAN4.4e-1146.34E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1[more]
RDUF2_ARATH5.8e-1140.00E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RNG1L_ARATH5.8e-1151.02E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
BLAST of Cp4.1LG10g12030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRB0_CUCSA1.1e-4849.55Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1[more]
A0A0A0L3Z2_CUCSA1.7e-4647.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1[more]
A0A0A0LHI3_CUCSA1.9e-3242.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889100 PE=4 SV=1[more]
A0A0A0LHS2_CUCSA1.9e-2436.41Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1[more]
A0A0A0K696_CUCSA1.0e-2236.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
BLAST of Cp4.1LG10g12030 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.13.3e-1251.02 RING/U-box superfamily protein[more]
AT5G59550.13.3e-1240.00 zinc finger (C3HC4-type RING finger) family protein[more]
AT3G46620.13.6e-1137.14 zinc finger (C3HC4-type RING finger) family protein[more]
AT3G02340.18.0e-1153.33 RING/U-box superfamily protein[more]
AT1G55530.11.0e-1048.08 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG10g12030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778674460|ref|XP_011650219.1|1.6e-4849.55PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus][more]
gi|700199693|gb|KGN54851.1|2.5e-4647.84hypothetical protein Csa_4G551140 [Cucumis sativus][more]
gi|659132530|ref|XP_008466247.1|5.4e-4149.56PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo][more]
gi|778689036|ref|XP_011652885.1|2.7e-3242.04PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus][more]
gi|449442467|ref|XP_004139003.1|2.7e-2436.41PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g12030.1Cp4.1LG10g12030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 170..212
score: 3.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 171..211
score: 6.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 171..212
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 166..215
score: 4.0
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 127..216
score: 2.1
NoneNo IPR availablePANTHERPTHR22763:SF3E3 UBIQUITIN-PROTEIN LIGASE RNF115coord: 127..216
score: 2.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 170..215
score: 1.12

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g12030Cucurbita pepo (Zucchini)cpecpeB079
Cp4.1LG10g12030Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g12030Cucumber (Gy14) v1cgycpeB0931
Cp4.1LG10g12030Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g12030Cucurbita moschata (Rifu)cmocpeB605
Cp4.1LG10g12030Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g12030Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g12030Wild cucumber (PI 183967)cpecpiB066
Cp4.1LG10g12030Cucumber (Chinese Long) v2cpecuB071
Cp4.1LG10g12030Bottle gourd (USVL1VR-Ls)cpelsiB055
Cp4.1LG10g12030Watermelon (Charleston Gray)cpewcgB079
Cp4.1LG10g12030Watermelon (97103) v1cpewmB091
Cp4.1LG10g12030Melon (DHL92) v3.5.1cpemeB072
Cp4.1LG10g12030Cucumber (Gy14) v2cgybcpeB464
Cp4.1LG10g12030Melon (DHL92) v3.6.1cpemedB087
Cp4.1LG10g12030Melon (DHL92) v3.6.1cpemedB095
Cp4.1LG10g12030Silver-seed gourdcarcpeB0398
Cp4.1LG10g12030Silver-seed gourdcarcpeB1196
Cp4.1LG10g12030Cucumber (Chinese Long) v3cpecucB0076
Cp4.1LG10g12030Wax gourdcpewgoB0092