Cp4.1LG10g11400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCAAAGAAAATAAGAAAAACCCAAATTTCCAAATTCATTTTCAAGCTTCCAACACCAACGCCCTTTCTTTTTTAACCAATTATTCCCTCTTTTCCCAAATCAAATTTCATTGCCGTTTGCCGCAACAACATCATAGAAAACACCAAAATCCGACATGGGAAGAGGCAGAGTAGAGATCAAGAAGATTGAGAATATCAACAGCCGACAAGTTACATTCTCAAAACGCCGAAATGGGTTGATGAAAAAGGCCAAAGAATTGTCGGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGCACTGGAAGACTTTATGAATTCTCCAGTACTAGGTACAAGAACAATCAAACATTTATGTTTCTGGGTTTTACTGGATTTGTCTCTTCAGATTTTTGTTCTTCATTATGTTCTTAAAGGGTTTTGAGTGTTTGATTATTTACCCATGTAAATTAATCACTGAATAGTAGAAACTTTTTGGGATTTTAACGATATGGGAGTTCGAAGATTGTTGGAAGAGAGTCCCGCATTGGCTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTCCGAGAAGCCCAAGGCAAACCCACGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTTCTAAAATGGTATTAGAGTCATGCCTTAAACTTAGCCAATTGTCGAACAAAGAAGTTGTGAGCCTCGAAGAAGTAGTCAAAAGTGACTCAAGTGTTGAACAAAGGGTGTACTTTGTTCAAGGACTCCAGAGAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTCGAGAGCTCCATAGGAATACTATCTCCGTTGGTATGAGGGCTTTTTGGAGAATCGCTATCTTAAAGAATAGAAGGGTTTTATTATTCAATCTTTTGGTCTTTAGTGAGCGTTCTTTTCTCAGTGATGAACCACACAAAGGTAAGATTTGGTCCTTTGTTATTGGAGACATGTTCTTTTAAATGTGGGGCTGTCTTGTCTCTCTGTCTTCCTGTCTTCTTGGAATGAGAAACATGTTTTGTTTTCCTCACTTCGAAAATTATTAACTGTTCTTTCTCTTTATGTTTTAAAGCATGGAACATACACTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAGAGAGACTTTGGACCATCCAACACAAGTAAAATGCGTTACATTCATGGCCTATGTTTTCTTCTCTTTGTCTTTTTTATGCTGAAATTCTCTGTTGAAAAATAGCTGCCACCATCGGATTCTGATGCGAAGTCATCCGAAGACGAGTTCGTAAAGCTGAAGTTAACGTACATGTAAGTTGACAGTTTTCTTGTTTGTTTATCAGCTATTCTTCTCGAGGGACCTCGCATAAGAGTTCTTAGTTGATATACTGAAATGAAAGAGTCTCTTAAGTTATGTGAGATCCCACGTCGGTTGGAGAGAAGAATGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAATAGGCGCGTTTTAAAACCGTGAGGCTGACGACGATACGTAATAGGCCAAAGTGGACAATATCTGTTAGTGGTGGGTTTGGGCTGTTACAAATGGTATCAGAGTCATACATCGGGCAGTGTGCCAATGAGAACGCTGGGCCACCAAGGGGAGTGGACTGTGAGATCCCACATCGGTTGGAGAGGAGAATAAAACATTCCTTATAAGGTTGTGGAAACCTCTCCCTAACGACGCGTTTTAAAACCGTGAGGCTGACGGCGATACATAACGGGCCAAAGTGGACAATATCTGTTAGCGGTGGGTTTGAGCTGTTACAAATGGTATCAGAGCCATACATCGCAGCGAGAACGTTGGGCCACTAATGGGGTGGATTTTGAGATCCCACATCAGTTAGAGAGGAAAATGAAACATTTCTTATAAGGCTGTGGAAACCTCTCCCTAACAAACGCATTTTAAAACTGTGAGGCTAACGACGATACGTAACGGGCCAAAGCGGACAAATATCTGTTAGCGGTGGGTTTGAGCTGTTACAAATAGTATCAGAGCCATACATCGGGTAGTATGTCAATGACAACATTGGGCTACCAAGAGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGAGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAAACACGTTTTAAAACCGTGAGACTGACGGCGATACGTAACAAGCCAAAGTGAACAATGTCTTTTAGCGGTGGGTTCGGGCTATTACAAGCTATGTCCGTTCATTTTACCAATTTATTTGCTTAACAATCTAGAATATGACTTAAAAAGGCTATTATGTGGCTTCCCATTTCCTGGATTTTATAGGCAGATGAGAGGGCAAGAACTGGATAGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAATTGCGGGAAGGGATCGTATCGATCAAAGACAAGAAGGTACCTTGCAAATAGACATGTTCATTTAAGTACACTTGTATGCTTGCCTTGGCTGAGACATGTTTTGCTTTCCTAGGAGTCATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCGCAGGTAACTTAGTTATCCCTTTTTTCAAATTTTCTTTTTGTTATATGTTTCTTAGAATCCAAAGAAGTTGAATTATCACAAGTAAGCTATTGAAGATTTTGGTTTGGAAGTCGAGTTTGTGACTTGTTTTTATAGGAACTTTATTACTGTGAGATCTCACGTCGGTTGGAGAGGGAAACGAAGCATTCTATGTATGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTAAAATGTGAGGTTGACGGCGATACGTAACGGGCGGAAGCGGACAATATCTGCTAGCTGTGGGTTTGGGCTGTTACAAATGGTATCAGAGTCAGACACCGAGCGATGTGCTAGTGAGGACACTAGGCCCCCAAGAGGAGTGGATTGTGAGATCCCACATTAGTTGGAGAGGGGAACGAAGCATTCCTTATAAAGGTGTGGAAATCTCTCCCTAGTAGATGCGTTTTAAAACTGTGAGGCTAATGACGATACGTAATGAACCAAAACGGATAATATCTGCTAGCGGTGGGTTTTGGCTGTTACAAATGGTATCAGAGTCAGACACTGAACGATGTGCCAGCGAGGACGCTAGGCCCTCAAGAGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAACAGACACGTTTTAAAATTGTGAGGCTGACGGCGATACGAAATGGGATAACGGACAATATCTACTTGGGTTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCAGGCGATGTGCCAACGAGGACGCTAGGCCTCAAGGGGGGTGGATTGTGAGATCTCACATTGCTTAGAGAGGGGAATGAAGCATTTCTTTTAAGGGTGTGGAAACCTCTCCTTCGTAGACGTGTTTTAAAACCGTGAGGTTGAGGACGATACATAACAGGCCAAAATGGACAATATCTGCTAGCGGTGTGTTTGGGCTGTTACAAATGGTATTAAAGCCAGACACTGAGCGATGTGCTAGCGAGGACGCTAAGCCCCCAAGGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCCAACAGACGCGTGTTAAAATTGTGAGGCTGACGGTGATACGAAACGGGATAAAGCGTACAATATCTACTAGCTGTGGGCTTGGGCTATTACCTACTATGATGTATGGAACGATGGGAAGTAGCTCGATAATGCCGAATAAAACGGTAGTGGGACAATTTGTAAGTTTATATAGACTGATGGATGAACTGAAATGCTTGTTGCATTACACTTGTATGAACATGTATGAACACAATCTTATAAGTTACTAACTTTCTCTCTTGATCTTAGTGATTGATTACTAACTATTTCCTATCTGATTTTGTTCATTCTTAGGGGGAAGTAGTCATTTCCGAGAACGAGACACTGCGAAAACAGGCTAGTTTTCGGCTCGTAGTTTAACTTCGATTTCCGAGATTGAACGAATGACACTAATGTTTTATATTTATCTTCCTTAGCTTGAGGAGTTTCAGCAGAGAAATAATACACCACTTTTGGAGTCGAGCCCGCTTCAGAGATCGTACTTTTCGGATTCGAAAACCGCTTCTACCAACGAGACTGAGGCCGAGACTGAGGCCGAGGAAAATGACTGCTCGGAAATTTCCTTGCATCTGGGGTAA ATGGACTCCAAAGAAAATAAGAAAAACCCAAATTTCCAAATTCATTTTCAAGCTTCCAACACCAACGCCCTTTCTTTTTTAACCAATTATTCCCTCTTTTCCCAAATCAAATTTCATTGCCGTTTGCCGCAACAACATCATAGAAAACACCAAAATCCGACATGGGAAGAGGCAGAGTAGAGATCAAGAAGATTGAGAATATCAACAGCCGACAAGTTACATTCTCAAAACGCCGAAATGGGTTGATGAAAAAGGCCAAAGAATTGTCGGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGCACTGGAAGACTTTATGAATTCTCCAGTACTAGCATGGAACATACACTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAGAGAGACTTTGGACCATCCAACACAACTGCCACCATCGGATTCTGATGCGAAGTCATCCGAAGACGAGTTCGTAAAGCTGAAGTTAACGTACATGCAGATGAGAGGGCAAGAACTGGATAGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAATTGCGGGAAGGGATCGTATCGATCAAAGACAAGAAGGAGTCATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCGCAGGGGGAAGTAGTCATTTCCGAGAACGAGACACTGCGAAAACAGGCTAGTTTTCGGCTCCTTGAGGAGTTTCAGCAGAGAAATAATACACCACTTTTGGAGTCGAGCCCGCTTCAGAGATCGTACTTTTCGGATTCGAAAACCGCTTCTACCAACGAGACTGAGGCCGAGACTGAGGCCGAGGAAAATGACTGCTCGGAAATTTCCTTGCATCTGGGGTAA ATGGGAAGAGGCAGAGTAGAGATCAAGAAGATTGAGAATATCAACAGCCGACAAGTTACATTCTCAAAACGCCGAAATGGGTTGATGAAAAAGGCCAAAGAATTGTCGGTTCTTTGTGATGCTGAGGTCGCCATTGTTGTCTTCTCCAGCACTGGAAGACTTTATGAATTCTCCAGTACTAGCATGGAACATACACTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAGAGAGACTTTGGACCATCCAACACAACTGCCACCATCGGATTCTGATGCGAAGTCATCCGAAGACGAGTTCGTAAAGCTGAAGTTAACGTACATGCAGATGAGAGGGCAAGAACTGGATAGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAATTGCGGGAAGGGATCGTATCGATCAAAGACAAGAAGGAGTCATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCGCAGGGGGAAGTAGTCATTTCCGAGAACGAGACACTGCGAAAACAGGCTAGTTTTCGGCTCCTTGAGGAGTTTCAGCAGAGAAATAATACACCACTTTTGGAGTCGAGCCCGCTTCAGAGATCGTACTTTTCGGATTCGAAAACCGCTTCTACCAACGAGACTGAGGCCGAGACTGAGGCCGAGGAAAATGACTGCTCGGAAATTTCCTTGCATCTGGGGTAA MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSSTSMEHTLSRYRGQGMELDFPRETLDHPTQLPPSDSDAKSSEDEFVKLKLTYMQMRGQELDSLSFRELQNLENQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQASFRLLEEFQQRNNTPLLESSPLQRSYFSDSKTASTNETEAETEAEENDCSEISLHLG
BLAST of Cp4.1LG10g11400 vs. Swiss-Prot
Match: AGL18_ARATH (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40 Identity = 102/229 (44.54%), Postives = 147/229 (64.19%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36 Identity = 86/172 (50.00%), Postives = 122/172 (70.93%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35 Identity = 81/172 (47.09%), Postives = 121/172 (70.35%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32 Identity = 76/174 (43.68%), Postives = 116/174 (66.67%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. Swiss-Prot
Match: AGL16_ARATH (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.8e-32 Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TrEMBL
Match: A0A0A0KYB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G410880 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.2e-68 Identity = 145/169 (85.80%), Postives = 151/169 (89.35%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TrEMBL
Match: V7BLX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G251600g PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54 Identity = 128/234 (54.70%), Postives = 165/234 (70.51%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TrEMBL
Match: A0A067DSV8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039982mg PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.1e-54 Identity = 127/233 (54.51%), Postives = 169/233 (72.53%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TrEMBL
Match: V4SC55_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005698mg PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.1e-54 Identity = 127/233 (54.51%), Postives = 169/233 (72.53%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TrEMBL
Match: A0A0R0L5A9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G185500 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 126/231 (54.55%), Postives = 162/231 (70.13%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18) HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41 Identity = 102/229 (44.54%), Postives = 147/229 (64.19%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TAIR10
Match: AT5G13790.1 (AT5G13790.1 AGAMOUS-like 15) HSP 1 Score: 151.0 bits (380), Expect = 9.0e-37 Identity = 81/172 (47.09%), Postives = 121/172 (70.35%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33 Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TAIR10
Match: AT4G22950.1 (AT4G22950.1 AGAMOUS-like 19) HSP 1 Score: 128.6 bits (322), Expect = 4.8e-30 Identity = 72/172 (41.86%), Postives = 114/172 (66.28%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. TAIR10
Match: AT5G62165.1 (AT5G62165.1 AGAMOUS-like 42) HSP 1 Score: 127.9 bits (320), Expect = 8.2e-30 Identity = 72/174 (41.38%), Postives = 113/174 (64.94%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. NCBI nr
Match: gi|659111559|ref|XP_008455789.1| (PREDICTED: MADS-box transcription factor 23-like [Cucumis melo]) HSP 1 Score: 384.0 bits (985), Expect = 1.8e-103 Identity = 208/230 (90.43%), Postives = 214/230 (93.04%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. NCBI nr
Match: gi|778694571|ref|XP_004150520.2| (PREDICTED: MADS-box transcription factor 23-like [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 4.4e-102 Identity = 206/230 (89.57%), Postives = 212/230 (92.17%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. NCBI nr
Match: gi|700199477|gb|KGN54635.1| (hypothetical protein Csa_4G410880 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 3.2e-68 Identity = 145/169 (85.80%), Postives = 151/169 (89.35%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. NCBI nr
Match: gi|985470121|ref|XP_015380906.1| (PREDICTED: agamous-like MADS-box protein AGL18 [Citrus sinensis]) HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54 Identity = 127/232 (54.74%), Postives = 171/232 (73.71%), Query Frame = 1
BLAST of Cp4.1LG10g11400 vs. NCBI nr
Match: gi|593689982|ref|XP_007145592.1| (hypothetical protein PHAVU_007G251600g [Phaseolus vulgaris]) HSP 1 Score: 220.3 bits (560), Expect = 3.4e-54 Identity = 128/234 (54.70%), Postives = 165/234 (70.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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