Cp4.1LG10g11180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g11180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Arginine/serine-rich coiled-coil 2
Location	Cp4.1LG10 : 7655570 .. 7659403 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGACACGTATGCAGTGCGCAATTGAATCTCATTCCTTCGTATAAAAATCGCTCAAGCAGACAAACGGGAATTAATGCTGGAATCGAAGAGGGGGAATGAACAAACAATCGCCTACAAAATTATTCAAGTGCAGTGAATGAATTCAATCGTTTGCTATTGAATCTCCTCACAAGGTATGAATTTCCATTTCCGCTTTCAATTTTTCCATTTTGCTTTCGCTTTTTGGTTTAGGGTTTGTTTTGGAATTCGAATTCGTCGATGTTTGAAACCCTAGGGTTGGATGTTTTCTTTGTTTGTTTGTTTGTTGGTCTGTCTTCTGGGAGAATTTCCTCAGGAACTGGGGGAGAGGTTGCAGGTTTTGTCTCCTCAAGCTTTGAATAGGGTTTTCTTTTGGTCTTTTTTGGTTCGGTTCCGTTAGTTATGTTCTGGGTTTTTGTATTATCATGTTTCGCTCCCTTTCTTCTGGGAGAACAAAACTAGCTGCAACTTTTATAAGCTGAAATGTGATGTCGTTGTGTTCTTGTGGATGTGGTATTAATTGTTGTTTTGGTAGCTTGTAAAATTTTGGTGGGAATGTTGTGTTGATCGTAAACGCTGGTTGCTGAGGTTCGTGCCACTATGAATTGCATTATCGGCCACTTGCTTTACTTGTTTGCAATCTTCTACTCTCTTCCTCGTGGCAACGAGTGTTTGGTTTGATTGGATGATGTGCAATTTTTGCTCCTTTTGCGTCTTTGTATCAAGTTTTCGGGATTTGTAAGTGACTTGTTGACAGTGTGTGTCTGTGTTTCAGGTCACTCTGTTGGCTATTCTAGTTTCATTTGAAATCAGGTTCATTAAGTGGATTGAACTTATAGCCTCCTACGATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCTTCTTCTGAAACAGTTGGCAGGAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGGTTAGTTTGATTTGATTTTGGGTTTTTCTTTTTGTGGAGTGAAAGTTCCTTCCGAAGACAACTATCACATGATTCTCAATTATCTTTGTGTGGTCTGTCAGTTCTTTTTCTTTTCTATATTTAGTATGTTCATGCTCATTATAAATATATATTTTTTTTTTTCAGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCAGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAATCCTCAAGAACTTCGCATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTTCGTTCACGAGACTACTCTCGGGATGTAGAAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGACCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGAAAAGAAGTTAACCACGAACAGGATGGTAAGTGCTCTATCATGTCCTATTTCAAGTTGTTTACATGCTAGCTTCACACTAGCATTATTGTCCTTACCAGTTATGAAATTTGATTATGCAGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGACTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGGTAAAATCTAATTCTTTATCTAGAAATTCATGCTAACCTAAGATCAATAATCCCTCTCTGATTGTTTGTCAGTTCATTATGAGCAAAGGTCTAACAAATTTTATTTGAGAACTACAAGCGTCTAATTTAGACTATTTTTCTTCCCTTTCAAAAATTTATTCTAAATTAGATGATGGTTGTTCTCAAAAGTTTTTGTTGGACCTTTGCACATAATTTTGATTTTTTTTTTCAATTGTTGAAGATAGTTGACTGCATTCTGATATTGTTCTACTTACAATTCTAAAAGAATATGTTTACCAAATCTGCATGGCTTCTTTTAATATCAATAAGTTTTAGAGCATAGCTCAACTAATTATGGAATATGCCCCCGAAGTTAGAGATTCGAATTCCCTCTCTTACTTGTTGAACTGAAAAAAAGAAAAAGAAAAGATTACTGGAGCTATTTAGTGCACAAAGTAATAACGCTCGCCTACTTGGGATCTTTTCTTTTCCTGGTTTTAGTTGGATTTGGTTCTCTACAATCGTAGTTTGGTTTTCTTAGTTCAGTGACTGAAACTGGAACAAAATTCCGTTTGAAGGTTACATATCACTTTAATTCTGGTTTATGGCGTAGATTATTTACAATGGCAATAGTTCAGATTTGAATGATCTGTAACTTTTCACTTCGAACTTTTATAAATTTGTGGTTTCTGTTCCATTAACAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGGTATACACAATCATCTAATGCTTAATCATTTCTTCATTTTGTTTGGCATGAAATAGTTGTGCATTTGGTTCATAATTAGAGACTTCGAAGAACCGAACTGCTCTAGCCACAGAATGACATATATGGATACTTTTCCGTGTTCTTCATAATGCTTTTCCATTGGTTACAGTCCGGACACCACCAGTGGGATACAGCATTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGTAAACTCTTCCCCTCCCCTCCCCGCTCATCTACTCGATATATCCCTGAATGTTAGCAAGCTTTCATTGCTTAGTCGTGACTCAGTCCATTACAGTTTCTTCGTCACCTACTAACACATTTTTAGAGTCTGAGGTTGCCTTGGTGCCTATGGCCACTTGTAGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAAAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAAGCTTGTTCAGGTCTTTAAGCTTGTTCGTCATCAGCTGTGGATTATTTCTGTGCTTTGATGAAATTGTTATGAGAATCTTTTGTTTATGTTGTTGCTGCACAAGAGTTGTGTTGAATGTGCTTTCAACAGCCTTTAACGTTATGTTATTCTCCTCTCCACCTCCCCTTAAGACCATAGGATTGTGGGTTTATGCATTTATGAAGGTTATAAGATCATCAGGTTGCCTCCAATTCCTTGATTGACTGCCCACTTTCTATGCATTGGTTTTTTTGTT

mRNA sequence

TATGACACGTATGCAGTGCGCAATTGAATCTCATTCCTTCGTATAAAAATCGCTCAAGCAGACAAACGGGAATTAATGCTGGAATCGAAGAGGGGGAATGAACAAACAATCGCCTACAAAATTATTCAAGTGCAGTGAATGAATTCAATCGTTTGCTATTGAATCTCCTCACAAGGTCACTCTGTTGGCTATTCTAGTTTCATTTGAAATCAGGTTCATTAAGTGGATTGAACTTATAGCCTCCTACGATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCTTCTTCTGAAACAGTTGGCAGGAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCAGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAATCCTCAAGAACTTCGCATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTTCGTTCACGAGACTACTCTCGGGATGTAGAAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGACCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGAAAAGAAGTTAACCACGAACAGGATGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGACTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGTCCGGACACCACCAGTGGGATACAGCATTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAAAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAAGCTTGTTCAGGTCTTTAAGCTTGTTCGTCATCAGCTGTGGATTATTTCTGTGCTTTGATGAAATTGTTATGAGAATCTTTTGTTTATGTTGTTGCTGCACAAGAGTTGTGTTGAATGTGCTTTCAACAGCCTTTAACGTTATGTTATTCTCCTCTCCACCTCCCCTTAAGACCATAGGATTGTGGGTTTATGCATTTATGAAGGTTATAAGATCATCAGGTTGCCTCCAATTCCTTGATTGACTGCCCACTTTCTATGCATTGGTTTTTTTGTT

Coding sequence (CDS)

ATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCTTCTTCTGAAACAGTTGGCAGGAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCAGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAATCCTCAAGAACTTCGCATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTTCGTTCACGAGACTACTCTCGGGATGTAGAAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGACCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGAAAAGAAGTTAACCACGAACAGGATGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGACTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGTCCGGACACCACCAGTGGGATACAGCATTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAAAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAA

Protein sequence

MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYERLSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHGSGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL

Homology

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BLAST of Cp4.1LG10g11180 vs. TrEMBL
Match: A0A0A0KYU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G430840 PE=4 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 2.1e-206
Identity = 401/474 (84.60%), Postives = 428/474 (90.30%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSS SDESPKRDRS SPKL RDDASK SERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSS-SDESPKRDRSSSPKLLRDDASKHSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR+SDSYRYSDRKSSR+ HGYSRHDDY RHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRSSDSYRYSDRKSSRSLHGYSRHDDYVRHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRS RESKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 LSSRSNRESKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRH S +EMEKHRN RDRDG+DEKRDN+KHS DYKNERVLSHD+ RGN+YDS LGRD
Sbjct: 181 SGSRRHASFEEMEKHRNARDRDGQDEKRDNIKHSGDYKNERVLSHDDGRGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TK+I+K+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKDINKNDRKDLDDEKSSKEERKHDARETHWDKVQGKESKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAA 360
           LPAKKPKL S GKEVNHE+DA+ENQSSTSK+EQDGKMSLGQ QSGDSDFAADFSAAKVAA
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDADENQSSTSKKEQDGKMSLGQGQSGDSDFAADFSAAKVAA 360

Query: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKL 420
           MKAAELVNKNLVG GYMTTDQKKKLLWGSKKS+AVEES  HQWDTALF DRERQEKFNKL
Sbjct: 361 MKAAELVNKNLVGGGYMTTDQKKKLLWGSKKSTAVEESA-HQWDTALFNDRERQEKFNKL 420

Query: 421 MGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           MGVKGE+K E +PTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 MGVKGEVKMESRPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Cp4.1LG10g11180 vs. TrEMBL
Match: A0A061EVL4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_024098 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.9e-112
Identity = 273/497 (54.93%), Postives = 350/497 (70.42%), Query Frame = 1


Query: 2   ENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSD-ESPKRDRSYSPKLSRDDASKDSERK 61
           + +  KA FRK S++   R+YRR S +S SSSS+  SP+RDRS SP LSRDD +K ++ +
Sbjct: 11  DGSDAKAAFRKFSNDASNRQYRRHSPISRSSSSEGNSPQRDRSVSPILSRDDLAKGADTQ 70

Query: 62  PRRKEDERELNKDSG-NHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYE 121
           P R  D REL++DS  N +SRNSDSYRYSDR+SSR+SHGYSRHD+Y RHDK+ADE   Y+
Sbjct: 71  PGR--DGRELDRDSSRNKYSRNSDSYRYSDRQSSRSSHGYSRHDNYVRHDKFADEGSKYD 130

Query: 122 RLSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSR--------- 181
           RLSSRSGRES+   H DH R++S+  RS+DYSR+ +K SRD+YDGSGHR R         
Sbjct: 131 RLSSRSGRESRFSTHSDHPRQESDISRSKDYSRNADKYSRDRYDGSGHRIRDKEKESQSL 190

Query: 182 ------DGDSLSEKHGSGSRRHVS-SKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVL 241
                 D DS  ++ GSG R+  S S+EM++ R  R RD R EK D  + S D K +   
Sbjct: 191 EHQKYKDKDSALDRAGSGRRQGSSFSEEMDRDRRRRGRDSRGEKGDYHRSSGDRKGDYTE 250

Query: 242 SHDNARGNQYDSFLG--RDESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKG-- 301
           S++ +RG++ DS  G  RD  K+  KE +KS  K++D +K AK+  K+D  ET+ +K   
Sbjct: 251 SYEESRGHRNDSSSGRERDNDKYRRKEGYKSGLKEIDGQKPAKERMKHDEWETNMEKDRY 310

Query: 302 --------HGKAVLVNENQGLPAKKPKLVSLGKEVNHEQDAEENQSSTSK-QEQDGKMSL 361
                     K++ V +NQ  PAKK KL S  K   +++DA+E +SS  + +E DG++++
Sbjct: 311 GGVLKEQCEEKSIFVGKNQESPAKKLKLFSSSKGNEYDKDADEKRSSLEQAEETDGRVTM 370

Query: 362 GQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGY--MTTDQKKKLLWGSKKSSAVEE 421
           GQA   D D   D ++AKVAAMKAAELVN+NL+G G+  MTT+QKKKLLWGSKKS+  EE
Sbjct: 371 GQAHGNDVDITNDINSAKVAAMKAAELVNRNLIGAGHSNMTTEQKKKLLWGSKKSTPAEE 430

Query: 422 SGHHQWDTALFTDRERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQ 466
           SG H+WDTALF DRERQEKFNKLMGVKGE+K E +P NQDGS LL+AEKQ+E+Q DLEKQ
Sbjct: 431 SG-HRWDTALFGDRERQEKFNKLMGVKGEVKVEQKPENQDGSGLLQAEKQREVQQDLEKQ 490

[Close]

BLAST of Cp4.1LG10g11180 vs. TrEMBL
Match: M5W8M2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004686mg PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-106
Identity = 259/503 (51.49%), Postives = 347/503 (68.99%), Query Frame = 1


Query: 2   ENNG-IKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 61
           +N+G  K  FRKP+++   RKYRRRS V GSS SD SP  + + SPK SR+D  K SE +
Sbjct: 9   KNSGDAKTAFRKPATDAANRKYRRRSPVGGSSPSDGSPMHEHNCSPKNSREDPGKVSEYQ 68

Query: 62  PRRKEDERELNKDSGN-HHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADE-DKDY 121
            RR++D REL +DS   ++ R+SDSYR+SDR+SSR+ HGY +HDD  +HDK+ADE DK+Y
Sbjct: 69  TRRRDDGRELERDSNRRYYGRSSDSYRHSDRQSSRSLHGYYKHDDCIKHDKHADEEDKNY 128

Query: 122 ERLSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGD----- 181
           ++LSSRSGRES+G  +YDH        +SR+YSR+++K SRDKYDGSG+R++D D     
Sbjct: 129 QKLSSRSGRESRGSAYYDH-------IKSREYSRNLDKYSRDKYDGSGYRNKDKDRESSF 188

Query: 182 ----------SLSEKHGSGSRR-HVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERV 241
                     S S++ GSG R  H    E E+ R+  DRD +DEK+D  ++S DY +ER+
Sbjct: 189 PENQKYKDKDSSSQRVGSGRRHGHFEEMERERDRHALDRDVQDEKKDYRRNSGDYISERI 248

Query: 242 LSHDNARGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDER-KYDGRETHW----- 301
            S++ ++G + DS   RDE KH  KE +KS+ K+LDD+  +K++R KYD +ET W     
Sbjct: 249 FSYEESKGQRSDSISRRDEGKHRMKEGYKSELKELDDDNVSKEQRKKYDDKETSWGNRIT 308

Query: 302 ----DKGHGKAVLVNENQGLPAKKPKLVSLGKEVNHEQD-------AEENQSSTSKQEQD 361
               ++   K  + +ENQ   AK+PKL S  K ++  +D       A+  +SS+SKQ Q+
Sbjct: 309 RETSERSADKHYIKSENQESTAKRPKLFSSEKGIDGRKDVSKFTTTADGRESSSSKQVQE 368

Query: 362 GKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVG---VGYMTTDQKKKLLWGSKK 421
            +M+  + Q+ D++ A D +AAKVAA+KAAELVN+NL+G   VG MT DQKKKLLWG+KK
Sbjct: 369 DEMTTEKTQANDAEAANDINAAKVAALKAAELVNRNLIGAGPVGCMTADQKKKLLWGNKK 428

Query: 422 SSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQ 466
           S+  EE G H+WD+ LF+DRERQEKFNKLMGVKGE+K E +P N+D       +KQKELQ
Sbjct: 429 STTAEEVG-HRWDSTLFSDRERQEKFNKLMGVKGEVKVEQKPENED-------QKQKELQ 488

[Close]

BLAST of Cp4.1LG10g11180 vs. TrEMBL
Match: D7TIR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05080 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.3e-104
Identity = 261/503 (51.89%), Postives = 349/503 (69.38%), Query Frame = 1


Query: 7   KAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKED 66
           K  FRKP+++   RKYRRRS  SGSSSS  SP  + + SP  S++D+ K S+R+ RRK D
Sbjct: 16  KTAFRKPTNDATNRKYRRRSPTSGSSSSGGSPIHEHNSSPIFSKEDSEKVSDRRQRRKGD 75

Query: 67  ERELNKDSG-NHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADE--DKDYERLSS 126
            REL++D+G + + + +DSYR+SDR+SSR+S G+ R+DD+ R +K+A +  D+D+  LSS
Sbjct: 76  GRELDRDAGRSQYRKTADSYRHSDRQSSRSSRGHYRYDDHVRQEKHAADEGDRDHHNLSS 135

Query: 127 RSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDG----------- 186
           RSGRES+ G + DH R++SEH R+RDY R  +K SRDK+D +G+RS+D            
Sbjct: 136 RSGRESRVGNYSDHVRQESEHSRTRDYFRGTDKYSRDKHDNAGYRSKDKEKETSSLEHQK 195

Query: 187 ----DSLSEKHGSGSRRHVSS-----KEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVL 246
               D  S++ GSG RRH +S     K  E+ +++RD DG DE++D  +   DYK++R +
Sbjct: 196 YKDKDLSSDRAGSG-RRHTNSNFEDSKAGEQDKHLRDGDGPDERKDYRRGLGDYKSDRSI 255

Query: 247 SHDNARGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDERK-YDGRET--HWDKGH 306
           SH+ +RG++ DS  GRD   + +KE+HK++ K++D +K  KDE+K YD  +T  H D+ +
Sbjct: 256 SHEESRGHRNDSTSGRDSGGYRSKEVHKNEPKEVDGQKQPKDEKKKYDEWKTDRHKDRYN 315

Query: 307 --------GKAVLVNENQGLPAKKPKLVSLGKEVNHEQD--------AEENQSSTSKQEQ 366
                    K V+ +ENQ   AKKPKLVSL K  ++ +D        A+  QSS+SK  Q
Sbjct: 316 RESREQFEDKTVVASENQESAAKKPKLVSLEKSTDYGKDVSRFSTAVADMKQSSSSKLAQ 375

Query: 367 D--GKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKK 426
           D   K++   A   +S+ A D +AAK+AAMKAAELVN+NLVGVGYM+ DQKKKLLWGSKK
Sbjct: 376 DIADKVTPEHAFLNNSEVANDLNAAKIAAMKAAELVNRNLVGVGYMSADQKKKLLWGSKK 435

Query: 427 SSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQ 466
           S+  EESGHH WDTALF+DRERQEKFNKLMGVKGE+K E +P NQD      AEKQ+ELQ
Sbjct: 436 STTAEESGHH-WDTALFSDRERQEKFNKLMGVKGEVKVEHKPDNQD------AEKQRELQ 495

[Close]

BLAST of Cp4.1LG10g11180 vs. TrEMBL
Match: V4S8F9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011438mg PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 3.0e-104
Identity = 257/483 (53.21%), Postives = 332/483 (68.74%), Query Frame = 1


Query: 7   KAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKED 66
           KA FRKPS++   R+YRRRS  +GSSSSD SPKRD + SP  SRDD S   E + RRK+D
Sbjct: 13  KASFRKPSNDAANRRYRRRSPANGSSSSDGSPKRDHNASPIYSRDDPSNVPEHQQRRKDD 72

Query: 67  ERELNKDSG-NHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYA-DEDKDYERLSSR 126
           EREL++DSG +HH R SDSYR+SDR+SSR+SH YS+HDDY RHDK+  DED++Y+RLSSR
Sbjct: 73  ERELDRDSGRSHHGRGSDSYRHSDRQSSRSSHNYSKHDDYVRHDKHENDEDRNYQRLSSR 132

Query: 127 SGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGH---------------RS 186
           SGRES+            +H RS+DY    E+SSRDKYD  GH               ++
Sbjct: 133 SGRESR------------DHSRSKDYLSSEERSSRDKYDVIGHGSKDKEKESSYLERQKN 192

Query: 187 RDGDSLSEKHGSGSRRHVS-SKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNA 246
           +D DS S++ GSG +  V+ S+E+++  + RDRDGRDEKRD  + S D++N+R +++D +
Sbjct: 193 KDKDSSSDRAGSGRKHTVAYSEELDRDWHKRDRDGRDEKRDYRRSSGDHRNDRTVTYDES 252

Query: 247 RGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDERK-YDGRETHWDKGH----GKA 306
           RG++  S  GRD   +  KE H+SD K+LD +K A +E+K ++  ET+ D+       K 
Sbjct: 253 RGHRNYSSSGRDYGSYRLKEAHRSDPKELDGQKLANEEKKKHNDSETNRDRDRYHRADKP 312

Query: 307 VLVNENQGLPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAA- 366
              +  Q  P KK +  +  K  ++ +DA    SS+S Q QD   +   AQS  +D  A 
Sbjct: 313 DFASGKQENPTKKQRFSNWDKGADNVKDAAGTMSSSSMQSQDIGDTDALAQSHANDAVAN 372

Query: 367 DFSAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDR 426
           D  AAKVAAM+AAELVNKNLVG  YM+TDQKKKLLWG+KKS+ VEES   +WDTAL  DR
Sbjct: 373 DLDAAKVAAMRAAELVNKNLVGGSYMSTDQKKKLLWGNKKSTPVEESAR-RWDTALIGDR 432

Query: 427 ERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVG 466
           +RQEKFNKLMGVKG+   E +P +QDG   L+AEKQ+ELQ+DLEKQYTAGLRRRDGRTVG
Sbjct: 433 DRQEKFNKLMGVKGDANVEHRPGDQDGGGHLQAEKQRELQLDLEKQYTAGLRRRDGRTVG 482

[Close]

BLAST of Cp4.1LG10g11180 vs. TAIR10
Match: AT3G56720.3 (AT3G56720.3 unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-14
Identity = 117/381 (30.71%), Postives = 170/381 (44.62%), Query Frame = 1


Query: 42  RSYSPKLSRDDASKDSERKPRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSR 101
           R Y  +   DD S  S+  P R       N+     HSR  DS     RK  R     SR
Sbjct: 30  RKYRRRALADDGSSSSDGSPER-------NQSPNPKHSRK-DSEPVHVRKEDRWESDRSR 89

Query: 102 HD----DYARHDKYADEDKDYERLSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKS 161
           +     D  RHD+Y                          +R D+  ++  +Y+R    +
Sbjct: 90  YGRGGVDSHRHDRY--------------------------SRDDNYGYKRDEYNRHGRDA 149

Query: 162 SRDKYDGSGHRSRDGDSLSEKHGSGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDY 221
                D  G R  D   +  ++ S  R        +K+ N   R   +EK +++   R +
Sbjct: 150 RSTSRDSRGGRHSDRRRVETEY-SRLRNDSDRSSHDKYSNSGHRVKSNEKGEDLSSGRRH 209

Query: 222 KNERVLSHDNARGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWD 281
            + RV  ++  RG+++      D      ++ H+  +   + E   K  R         D
Sbjct: 210 SDSRVEDNEK-RGSRWGF---GDRHSRVERKEHEDPEISKEKEVHVKSSR---------D 269

Query: 282 KGHGKAVLVNENQGLPAKKPK-LVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSG 341
           +  GK  L  E++   +KK K  +S             ++ +T    ++ + S+ +   G
Sbjct: 270 RSDGKC-LATEDRDTHSKKLKGFIS-------------DKFTTGNTNEEKQTSILKPSPG 329

Query: 342 DSDFAADFSAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWD- 401
           D D      AAKVAAM+AAELVNKNLVG GY+TTDQKKKLLWG KKS+A EES  H+WD 
Sbjct: 330 DVD------AAKVAAMQAAELVNKNLVGTGYLTTDQKKKLLWGKKKSTASEESA-HRWDN 341

Query: 402 -TALFTDRERQEKFNKLMGVK 416
            +AL  D ERQEKFNKLM ++
Sbjct: 390 ASALIGDPERQEKFNKLMSLR 341

[Close]

BLAST of Cp4.1LG10g11180 vs. NCBI nr
Match: gi|659111383|ref|XP_008455722.1| (PREDICTED: serine/threonine-protein kinase fray2 isoform X4 [Cucumis melo])

HSP 1 Score: 745.7 bits (1924), Expect = 4.8e-212
Identity = 408/474 (86.08%), Postives = 432/474 (91.14%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSSSSDESPKRDRS SPKL RDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSSSSDESPKRDRSSSPKLLRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR SDSYRYSDRKSSR+ HGYSRHDDYARHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRGSDSYRYSDRKSSRSLHGYSRHDDYARHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           +SSRS R+SKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 VSSRSNRDSKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SG RRH S +EMEKHRN RDRDGRDEKRDNMKHS DYKNERVLSHD+ARGN+YDS LGRD
Sbjct: 181 SGGRRHASFEEMEKHRNARDRDGRDEKRDNMKHSGDYKNERVLSHDDARGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TKEIHK+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKEIHKNDRKDLDDEKSSKEERKHDARETHWDKVQGKELKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAA 360
           LPAKKPKL S GKEVNHE+DA+ENQSSTSK+EQDGKMSLGQ +SGDSDFAADFSAAKVAA
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDADENQSSTSKKEQDGKMSLGQGESGDSDFAADFSAAKVAA 360

Query: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKL 420
           MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKS+AVEESG HQWDTALF DRERQEKFNKL
Sbjct: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSTAVEESG-HQWDTALFNDRERQEKFNKL 420

Query: 421 MGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           MGVKGELK E +PTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 MGVKGELKMESRPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 473

[Close]

BLAST of Cp4.1LG10g11180 vs. NCBI nr
Match: gi|659111381|ref|XP_008455721.1| (PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X3 [Cucumis melo])

HSP 1 Score: 738.8 bits (1906), Expect = 5.8e-210
Identity = 408/481 (84.82%), Postives = 432/481 (89.81%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSSSSDESPKRDRS SPKL RDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSSSSDESPKRDRSSSPKLLRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR SDSYRYSDRKSSR+ HGYSRHDDYARHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRGSDSYRYSDRKSSRSLHGYSRHDDYARHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           +SSRS R+SKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 VSSRSNRDSKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SG RRH S +EMEKHRN RDRDGRDEKRDNMKHS DYKNERVLSHD+ARGN+YDS LGRD
Sbjct: 181 SGGRRHASFEEMEKHRNARDRDGRDEKRDNMKHSGDYKNERVLSHDDARGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TKEIHK+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKEIHKNDRKDLDDEKSSKEERKHDARETHWDKVQGKELKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADF 360
           LPAKKPKL S GKEVNHE+D       A+ENQSSTSK+EQDGKMSLGQ +SGDSDFAADF
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDVMKFEYAADENQSSTSKKEQDGKMSLGQGESGDSDFAADF 360

Query: 361 SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRER 420
           SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKS+AVEESG HQWDTALF DRER
Sbjct: 361 SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSTAVEESG-HQWDTALFNDRER 420

Query: 421 QEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLG 466
           QEKFNKLMGVKGELK E +PTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLG
Sbjct: 421 QEKFNKLMGVKGELKMESRPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLG 480

[Close]

BLAST of Cp4.1LG10g11180 vs. NCBI nr
Match: gi|449453167|ref|XP_004144330.1| (PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 726.5 bits (1874), Expect = 3.0e-206
Identity = 401/474 (84.60%), Postives = 428/474 (90.30%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSS SDESPKRDRS SPKL RDDASK SERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSS-SDESPKRDRSSSPKLLRDDASKHSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR+SDSYRYSDRKSSR+ HGYSRHDDY RHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRSSDSYRYSDRKSSRSLHGYSRHDDYVRHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRS RESKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 LSSRSNRESKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRH S +EMEKHRN RDRDG+DEKRDN+KHS DYKNERVLSHD+ RGN+YDS LGRD
Sbjct: 181 SGSRRHASFEEMEKHRNARDRDGQDEKRDNIKHSGDYKNERVLSHDDGRGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TK+I+K+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKDINKNDRKDLDDEKSSKEERKHDARETHWDKVQGKESKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAA 360
           LPAKKPKL S GKEVNHE+DA+ENQSSTSK+EQDGKMSLGQ QSGDSDFAADFSAAKVAA
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDADENQSSTSKKEQDGKMSLGQGQSGDSDFAADFSAAKVAA 360

Query: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKL 420
           MKAAELVNKNLVG GYMTTDQKKKLLWGSKKS+AVEES  HQWDTALF DRERQEKFNKL
Sbjct: 361 MKAAELVNKNLVGGGYMTTDQKKKLLWGSKKSTAVEESA-HQWDTALFNDRERQEKFNKL 420

Query: 421 MGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           MGVKGE+K E +PTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 MGVKGEVKMESRPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Cp4.1LG10g11180 vs. NCBI nr
Match: gi|659111379|ref|XP_008455720.1| (PREDICTED: micronuclear linker histone polyprotein isoform X2 [Cucumis melo])

HSP 1 Score: 654.1 bits (1686), Expect = 1.9e-184
Identity = 358/424 (84.43%), Postives = 383/424 (90.33%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSSSSDESPKRDRS SPKL RDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSSSSDESPKRDRSSSPKLLRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR SDSYRYSDRKSSR+ HGYSRHDDYARHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRGSDSYRYSDRKSSRSLHGYSRHDDYARHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           +SSRS R+SKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 VSSRSNRDSKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SG RRH S +EMEKHRN RDRDGRDEKRDNMKHS DYKNERVLSHD+ARGN+YDS LGRD
Sbjct: 181 SGGRRHASFEEMEKHRNARDRDGRDEKRDNMKHSGDYKNERVLSHDDARGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TKEIHK+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKEIHKNDRKDLDDEKSSKEERKHDARETHWDKVQGKELKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAA 360
           LPAKKPKL S GKEVNHE+DA+ENQSSTSK+EQDGKMSLGQ +SGDSDFAADFSAAKVAA
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDADENQSSTSKKEQDGKMSLGQGESGDSDFAADFSAAKVAA 360

Query: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKL 416
           MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKS+AVEESG HQWDTALF DRERQEKFNKL
Sbjct: 361 MKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSTAVEESG-HQWDTALFNDRERQEKFNKL 420

[Close]

BLAST of Cp4.1LG10g11180 vs. NCBI nr
Match: gi|659111377|ref|XP_008455719.1| (PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 647.1 bits (1668), Expect = 2.3e-182
Identity = 358/431 (83.06%), Postives = 383/431 (88.86%), Query Frame = 1


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSET GRKYRRRSSVSGSSSSDESPKRDRS SPKL RDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETAGRKYRRRSSVSGSSSSDESPKRDRSSSPKLLRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDER+LNKDS NHHSR SDSYRYSDRKSSR+ HGYSRHDDYARHDKYADE++DYER
Sbjct: 61  PRRKEDERDLNKDSRNHHSRGSDSYRYSDRKSSRSLHGYSRHDDYARHDKYADEERDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180
           +SSRS R+SKG  HYDHTRR+SEH RSR+Y RDVEK SRDKYD SGHRSRDGDSLSE+HG
Sbjct: 121 VSSRSNRDSKGSAHYDHTRRESEHSRSREYFRDVEKGSRDKYDASGHRSRDGDSLSERHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SG RRH S +EMEKHRN RDRDGRDEKRDNMKHS DYKNERVLSHD+ARGN+YDS LGRD
Sbjct: 181 SGGRRHASFEEMEKHRNARDRDGRDEKRDNMKHSGDYKNERVLSHDDARGNRYDSLLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGH---------GKAVLVNENQG 300
           ESKH TKEIHK+D+KDLDDEK +K+ERK+D RETHWDK           GK V V+ENQG
Sbjct: 241 ESKHRTKEIHKNDRKDLDDEKSSKEERKHDARETHWDKVQGKELKGKYDGKGVFVDENQG 300

Query: 301 LPAKKPKLVSLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADF 360
           LPAKKPKL S GKEVNHE+D       A+ENQSSTSK+EQDGKMSLGQ +SGDSDFAADF
Sbjct: 301 LPAKKPKLFSSGKEVNHEEDVMKFEYAADENQSSTSKKEQDGKMSLGQGESGDSDFAADF 360

Query: 361 SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRER 416
           SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKS+AVEESG HQWDTALF DRER
Sbjct: 361 SAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSTAVEESG-HQWDTALFNDRER 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g11180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g11180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYU7_CUCSA	2.1e-206	84.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G430840 PE=4 SV=1	[more]
A0A061EVL4_THECC	3.9e-112	54.93	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_024098 PE=4 SV=1	[more]
M5W8M2_PRUPE	1.1e-106	51.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004686mg PE=4 SV=1	[more]
D7TIR0_VITVI	2.3e-104	51.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05080 PE=4 SV=...	[more]
V4S8F9_9ROSI	3.0e-104	53.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011438mg PE=4 SV=1	[more]

BLAST of Cp4.1LG10g11180 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56720.3	3.4e-14	30.71	unknown protein	[more]

BLAST of Cp4.1LG10g11180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111383\|ref\|XP_008455722.1\|	4.8e-212	86.08	PREDICTED: serine/threonine-protein kinase fray2 isoform X4 [Cucumis melo]	[more]
gi\|659111381\|ref\|XP_008455721.1\|	5.8e-210	84.82	PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X3 [Cucumis melo]	[more]
gi\|449453167\|ref\|XP_004144330.1\|	3.0e-206	84.60	PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X2 [Cucumis sativu...	[more]
gi\|659111379\|ref\|XP_008455720.1\|	1.9e-184	84.43	PREDICTED: micronuclear linker histone polyprotein isoform X2 [Cucumis melo]	[more]
gi\|659111377\|ref\|XP_008455719.1\|	2.3e-182	83.06	PREDICTED: arginine/serine-rich coiled-coil protein 2 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR028125	Lysine-rich nucleolar protein 1
IPR028124	SMAP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g11180.1	Cp4.1LG10g11180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028124	Small acidic protein-like domain	PFAM	PF15477	SMAP	coord: 394..464 score: 1.4
IPR028125	Lysine-rich nucleolar protein 1	PANTHER	PTHR22426	UNCHARACTERIZED	coord: 7..465 score: 1.5
None	No IPR available	PANTHER	PTHR22426:SF1	LYSINE-RICH NUCLEOLAR PROTEIN 1	coord: 7..465 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g11180	Cucsa.068470	Cucumber (Gy14) v1	cgycpeB0105
Cp4.1LG10g11180	CmaCh03G001440	Cucurbita maxima (Rimu)	cmacpeB655
Cp4.1LG10g11180	CmaCh07G010890	Cucurbita maxima (Rimu)	cmacpeB865
Cp4.1LG10g11180	CmoCh07G011390	Cucurbita moschata (Rifu)	cmocpeB805
Cp4.1LG10g11180	CmoCh03G001500	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g11180	Cla012101	Watermelon (97103) v1	cpewmB082
Cp4.1LG10g11180	Csa4G430840	Cucumber (Chinese Long) v2	cpecuB081
Cp4.1LG10g11180	MELO3C019097	Melon (DHL92) v3.5.1	cpemeB063
Cp4.1LG10g11180	ClCG04G005630	Watermelon (Charleston Gray)	cpewcgB076
Cp4.1LG10g11180	CSPI04G19100	Wild cucumber (PI 183967)	cpecpiB078
Cp4.1LG10g11180	Lsi01G017720	Bottle gourd (USVL1VR-Ls)	cpelsiB056
Cp4.1LG10g11180	MELO3C019097.2	Melon (DHL92) v3.6.1	cpemedB083
Cp4.1LG10g11180	CsaV3_4G029490	Cucumber (Chinese Long) v3	cpecucB0087
Cp4.1LG10g11180	Bhi03G002042	Wax gourd	cpewgoB0089
Cp4.1LG10g11180	CsGy4G018100	Cucumber (Gy14) v2	cgybcpeB474
Cp4.1LG10g11180	Carg13310	Silver-seed gourd	carcpeB0826
Cp4.1LG10g11180	Carg24091	Silver-seed gourd	carcpeB0307

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g11180	Cucurbita maxima (Rimu)	cmacpeB255
Cp4.1LG10g11180	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g11180	Cucurbita maxima (Rimu)	cmacpeB867
Cp4.1LG10g11180	Cucurbita moschata (Rifu)	cmocpeB219
Cp4.1LG10g11180	Cucurbita moschata (Rifu)	cmocpeB605
Cp4.1LG10g11180	Wild cucumber (PI 183967)	cpecpiB068
Cp4.1LG10g11180	Cucumber (Chinese Long) v2	cpecuB066
Cp4.1LG10g11180	Cucumber (Chinese Long) v2	cpecuB072
Cp4.1LG10g11180	Bottle gourd (USVL1VR-Ls)	cpelsiB048
Cp4.1LG10g11180	Watermelon (Charleston Gray)	cpewcgB082
Cp4.1LG10g11180	Cucumber (Gy14) v2	cgybcpeB293
Cp4.1LG10g11180	Cucumber (Gy14) v2	cgybcpeB466
Cp4.1LG10g11180	Melon (DHL92) v3.6.1	cpemedB074
Cp4.1LG10g11180	Silver-seed gourd	carcpeB0349
Cp4.1LG10g11180	Cucumber (Chinese Long) v3	cpecucB0072
Cp4.1LG10g11180	Cucumber (Chinese Long) v3	cpecucB0078