Cp4.1LG10g10480 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g10480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChitinase
LocationCp4.1LG10 : 4053159 .. 4054811 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTCATACGCTTATTGTCTTAGCCTTTGCCTTCGTTTTGGGAGGCGCAGCAGAGCAATGTGGGCGGCAGGCCAATGGCGCTCTCTGCCCCAATCGCCTCTGCTGCAGCCAGTTTGGATGGTGCGGCAACACCGACGAGTATTGTAAAAACAATTGCCAGAGCCAGTGTGGCGGCTCCACTCCTTCTACACCCCCCAGTACTGGCGGCAGCGGCGTCGGAGGTATCATCAGTGAAGCCCTCTACAATCAAATGCTCAAGTATAGCAAGGATCCTCGATGCCCCAGTAATGGATTCTATAGATATAATGCTTTCATTACTGCCGCTCAATCCTTCTCTGGCTTTGGTACCACCGGAGATGCCGCTACTCGTAAACGGGAGCTCGCTGCTTTCTTCGGCCAAACTTCTCATGAAACTACTGGTTAGTGTTACAGAACTTTCCTGATTTTGCTTTTGATTTCTTAAATTAAATTATAAACTCATGATCATTTTTTAAATTAGCTGACGTTGGACTACTCCCTCGACAATTTTCCATTCGAACAAAGTACACTATAGAGTCTTTTTGAAGCCTATGCAGCCCTCGAACAGCCTCCCCTTAATTGAGATTCGACTTTTTCTAATCCTAGAACAAAGTACCCTTTGTTCGACATTTGAGTCACTCTTGACTACAACTTCGAGGCTCACAACTTATTTGTTCGACATTTTAGGATTTTATTGATATGGGTAAGTTAAAAGACATAACTCTATACCATGTTAGGAACCACGAACCTATACAATGGTATAATATTGTCCACTTTGAGCATAAGCTCTTATGTTCTATGTTCTCGGCTTCCCCAAAAGGCCTCATTCCCCAAGAGGCCTCATTCCCCAAGAGGCCTCAGGTTAGGAATCACGAACCTCTATAATGGTATAATATTGTCCACTTTGAGCATAAGCTCTAGTGACTTTTGTTCTAGACTTCCGAAAAAGCCTCATTCCAATCGAGATATAATCGGTACTGTAATTTTGACTTACAAATGGATGTTAAAACGAGTGTGGCGCAGGAGGGTGGGCTACCGCACCGGATGGCCCATATGCGTGGGGATATTGCTTCATAAGGGAGAGAAACCAAGACGTATATTGCTCACCTAACCAACAATGGCCGTGTGCTGCTGGCCAGAAATATTACGGCCGTGGCCCAATTCAGCTAACCCAGTAAGACCTCTGTTCTTCCTATAACACATTATATTATCAAAATTCTGAGATTCTAATCCTAATTCGTGAAATTATCAAACGTTTTGTAGTAACTACAACTACGGGCCAGCGGGTAGGGCGCTAAATTTGAATTTGCTAGGCAACCCTGATTTGGTAGCCACGGATGCGGTTGTTGCATTCAAGACAGCCATTTGGTTCTGGATGACACCACAAGGAAACAAGCCATCGTGCCATGATGTTATCACTGGGAGATGGCAGCCTTCGGCCGCCGACAGCGCTGCCGGGAGAGTGCCTGGGTATGGTGTCATCACCAACATCATCAATGGTGGGCTCGAGTGTGGGCGTGGTGCCGATAGCAGAGTTGCTGATAGAATTGGGTTTTACAAAAGGTACTGTGACTTGTTGGGCATCGGCTATGGCAACAACTTGGATTGCAACAATCAAAGGTCTTTCTAA

mRNA sequence

ATGAAGCTTCATACGCTTATTGTCTTAGCCTTTGCCTTCGTTTTGGGAGGCGCAGCAGAGCAATGTGGGCGGCAGGCCAATGGCGCTCTCTGCCCCAATCGCCTCTGCTGCAGCCAGTTTGGATGGTGCGGCAACACCGACGAGTATTGTAAAAACAATTGCCAGAGCCAGTGTGGCGGCTCCACTCCTTCTACACCCCCCAGTACTGGCGGCAGCGGCGTCGGAGGTATCATCAGTGAAGCCCTCTACAATCAAATGCTCAATAACTACAACTACGGGCCAGCGGGTAGGGCGCTAAATTTGAATTTGCTAGGCAACCCTGATTTGGTAGCCACGGATGCGGTTGTTGCATTCAAGACAGCCATTTGGTTCTGGATGACACCACAAGGAAACAAGCCATCGTGCCATGATGTTATCACTGGGAGATGGCAGCCTTCGGCCGCCGACAGCGCTGCCGGGAGAGTGCCTGGGTATGGTGTCATCACCAACATCATCAATGGTGGGCTCGAGTGTGGGCGTGGTGCCGATAGCAGAGTTGCTGATAGAATTGGGTTTTACAAAAGGTACTGTGACTTGTTGGGCATCGGCTATGGCAACAACTTGGATTGCAACAATCAAAGGTCTTTCTAA

Coding sequence (CDS)

ATGAAGCTTCATACGCTTATTGTCTTAGCCTTTGCCTTCGTTTTGGGAGGCGCAGCAGAGCAATGTGGGCGGCAGGCCAATGGCGCTCTCTGCCCCAATCGCCTCTGCTGCAGCCAGTTTGGATGGTGCGGCAACACCGACGAGTATTGTAAAAACAATTGCCAGAGCCAGTGTGGCGGCTCCACTCCTTCTACACCCCCCAGTACTGGCGGCAGCGGCGTCGGAGGTATCATCAGTGAAGCCCTCTACAATCAAATGCTCAATAACTACAACTACGGGCCAGCGGGTAGGGCGCTAAATTTGAATTTGCTAGGCAACCCTGATTTGGTAGCCACGGATGCGGTTGTTGCATTCAAGACAGCCATTTGGTTCTGGATGACACCACAAGGAAACAAGCCATCGTGCCATGATGTTATCACTGGGAGATGGCAGCCTTCGGCCGCCGACAGCGCTGCCGGGAGAGTGCCTGGGTATGGTGTCATCACCAACATCATCAATGGTGGGCTCGAGTGTGGGCGTGGTGCCGATAGCAGAGTTGCTGATAGAATTGGGTTTTACAAAAGGTACTGTGACTTGTTGGGCATCGGCTATGGCAACAACTTGGATTGCAACAATCAAAGGTCTTTCTAA

Protein sequence

MKLHTLIVLAFAFVLGGAAEQCGRQANGALCPNRLCCSQFGWCGNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF
Homology
[Close]
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.7e-56
Identity = 93/125 (74.40%), Postives = 111/125 (88.80%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+  NYNYGP G AL +NLLGNPDLVATD V++FKTA+WFWMTPQ  KPSCHDV+TGRWQ
Sbjct: 118 QLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQ 177

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           PSAAD+AAGR+PGYGV+TN++NGGLECG+G + +VADR+GF++RYC LLG+G GNNLDC 
Sbjct: 178 PSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCY 237

Query: 205 NQRSF 210
           NQR F
Sbjct: 238 NQRPF 242

[Close]
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55
Identity = 106/175 (60.57%), Postives = 126/175 (72.00%), Query Frame = 1 

Query: 40  FGWC-----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGP 99
           +G+C     G+  +YC  + Q  C        P     G G I       Q+ +NYNYGP
Sbjct: 149 WGYCFLREQGSPGDYCTPSSQWPCA-------PGRKYFGRGPI-------QISHNYNYGP 208

Query: 100 AGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGR 159
            GRA+ ++LL NPDLVATD+V++FK+AIWFWMTPQ  KPSCHDVITGRWQPS AD AA R
Sbjct: 209 CGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANR 268

Query: 160 VPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           VPG+GVITNIINGGLECG G+DSRV DRIGFY+RYC +LG+  G+NLDC NQRSF
Sbjct: 269 VPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSF 309

[Close]
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-55
Identity = 106/175 (60.57%), Postives = 124/175 (70.86%), Query Frame = 1 

Query: 40  FGWC-----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGP 99
           +G+C     G+  +YC  + Q  C        P     G G I       Q+ +NYNYGP
Sbjct: 153 WGYCFLREQGSPGDYCTPSSQWPCA-------PGRKYFGRGPI-------QISHNYNYGP 212

Query: 100 AGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGR 159
            GRA+ ++LL NPDLVATD V++FK+AIWFWMTPQ  KPSCHDVITGRWQPS AD AA R
Sbjct: 213 CGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANR 272

Query: 160 VPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           VPG+GVITNIINGGLECG G+DSRV DRIGFY+RYC +LG+  G NLDC NQRSF
Sbjct: 273 VPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSF 313

[Close]
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-55
Identity = 105/175 (60.00%), Postives = 125/175 (71.43%), Query Frame = 1 

Query: 40  FGWC-----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGP 99
           +G+C     G+  +YC  + Q  C        P     G G I       Q+ +NYNYGP
Sbjct: 149 WGYCFLREQGSPGDYCTPSSQWPCA-------PGRKYFGRGPI-------QISHNYNYGP 208

Query: 100 AGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGR 159
            GRA+ ++LL NPDLVATD+V++FK+AIWFWMTPQ  KPSCHDVITGRWQPS  D AA R
Sbjct: 209 CGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANR 268

Query: 160 VPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           VPG+GVITNIINGGLECG G+DSRV DRIGFY+RYC +LG+  G+NLDC NQRSF
Sbjct: 269 VPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSF 309

[Close]
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.2e-55
Identity = 104/175 (59.43%), Postives = 125/175 (71.43%), Query Frame = 1 

Query: 40  FGWC-----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGP 99
           +G+C     G+  +YC  + Q  C        P     G G I       Q+ +NYNYGP
Sbjct: 147 WGYCFLREQGSPGDYCTPSNQWPCA-------PGRKYFGRGPI-------QISHNYNYGP 206

Query: 100 AGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGR 159
            GRA+ ++LL NPDLVATD++++FK+AIWFWMTPQ  KPSCHDVITGRWQPS  D AA R
Sbjct: 207 CGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANR 266

Query: 160 VPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           VPG+GVITNIINGGLECG G+DSRV DRIGFY+RYC +LG+  G+NLDC NQRSF
Sbjct: 267 VPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSF 307

[Close]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match: K4D1N1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-71
Identity = 127/208 (61.06%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 5   TLIVLAFAFVL--GGAAEQCGRQANGALCPNRLCCSQFGWCGNTDEYCKN-NCQSQCGGS 64
           T   L F+ VL    +A+ CG Q  G +C +  CCS+FGWCGNT+++C + NCQSQC G 
Sbjct: 8   TTFSLVFSLVLLSAASAQNCGSQGGGKVCASGQCCSKFGWCGNTNDHCASGNCQSQCPGG 67

Query: 65  TPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTA 124
            P   P TGG  +  +IS ++++QMLNNYNYGP GRA+ ++LL NPDL ATD V++FKTA
Sbjct: 68  GPGPGPDTGGD-LRSVISNSMFDQMLNNYNYGPCGRAIGVDLLNNPDLAATDPVISFKTA 127

Query: 125 IWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRVPGYGVITNIINGGLECGRGADSRVAD 184
           IWFWMTPQ  KPS HDVI GRW PSA D +A R+PG+GVITNIINGGLECGRG D+RV D
Sbjct: 128 IWFWMTPQSPKPSGHDVIIGRWNPSAGDRSANRLPGFGVITNIINGGLECGRGNDNRVQD 187

Query: 185 RIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           RIGFY+ YC +LG+  G+NLDC NQR F
Sbjct: 188 RIGFYRSYCRILGVSPGDNLDCGNQRPF 214

[Close]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match: B9FQZ4_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22712 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68
Identity = 132/230 (57.39%), Postives = 153/230 (66.52%), Query Frame = 1 

Query: 14  VLGGAAEQCGRQANGALCPNRLCCSQFGWCGNTDEYCKNNCQSQCGGST---PSTPPSTG 73
           V+    EQCG QA GALCPN LCCSQ+GWCG+T +YC   CQSQC G     P+ P S G
Sbjct: 3   VVAVRGEQCGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCSGGCGGGPTPPSSGG 62

Query: 74  GSGVGGIISEALYNQMLNNYN------------------------YGPAG-------RAL 133
           GSGV  IIS +L++QML + N                        +   G        A+
Sbjct: 63  GSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREAI 122

Query: 134 NLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRVPGYG 193
             +LL NPDLVA+DA V+FKTA WFWMTPQ  KPSCH VITG+W PSA D AAGRVPGYG
Sbjct: 123 GSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYG 182

Query: 194 VITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
            ITNIINGG+ECG GAD +VADRIGFYKRYCD+LG+ YG+NLDC NQR +
Sbjct: 183 EITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 232

[Close]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match: O80404_9ROSI (Chitinase OS=Cucurbita cv. Ebisu Nankin GN=chitP1 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.5e-67
Identity = 132/174 (75.86%), Postives = 136/174 (78.16%), Query Frame = 1 

Query: 40  FGWC----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPA 99
           +G+C     N D YC  N Q  C              G G I       Q+ +NYNYGPA
Sbjct: 152 WGYCFIRERNQDVYCSPNQQWPCAAGQKYY-------GRGPI-------QLTHNYNYGPA 211

Query: 100 GRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 159
           GRALNLNLL NPDLVATD VVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV
Sbjct: 212 GRALNLNLLNNPDLVATDPVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 271

Query: 160 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF
Sbjct: 272 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 311

[Close]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match: Q207U1_MOMCH (Chitinase OS=Momordica charantia GN=ChiA PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.0e-59
Identity = 120/174 (68.97%), Postives = 128/174 (73.56%), Query Frame = 1 

Query: 40  FGWC----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPA 99
           +G+C     N D YC  N Q  C        P     G G I       Q+ +NYNYGPA
Sbjct: 154 WGYCFIRERNQDTYCSPNQQWPCA-------PGQKYYGRGPI-------QLTHNYNYGPA 213

Query: 100 GRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 159
           GRAL LNLL NPD VATD  V+FKTAIWFWMTPQGNKPS HDVI G+WQPS ADSAAGRV
Sbjct: 214 GRALGLNLLNNPDSVATDPTVSFKTAIWFWMTPQGNKPSSHDVIIGKWQPSGADSAAGRV 273

Query: 160 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           PGYGVITNIINGGLECGRG DSRVADRIGF+KRYCD+L IGYGNNLDCNNQR F
Sbjct: 274 PGYGVITNIINGGLECGRGPDSRVADRIGFFKRYCDILRIGYGNNLDCNNQRPF 313

[Close]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match: A0A0A0KGV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G508020 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.0e-59
Identity = 103/125 (82.40%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+ +NYNYGPAG AL+LNLL NPDLVAT+A+++FK AIWFWMTPQGNKPSCH+VITG WQ
Sbjct: 236 QLTHNYNYGPAGNALSLNLLSNPDLVATNAIISFKAAIWFWMTPQGNKPSCHNVITGNWQ 295

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           PS+ D AAGRVPGYGVITNIINGGLECG G DSRV DRIGFYKRYCD+LGIGYG+NLDCN
Sbjct: 296 PSSIDRAAGRVPGYGVITNIINGGLECGHGPDSRVEDRIGFYKRYCDMLGIGYGSNLDCN 355

Query: 205 NQRSF 210
           NQ+SF
Sbjct: 356 NQQSF 360

[Close]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match: AT3G12500.1 (AT3G12500.1 basic chitinase)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-52
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+  NYNYG  GRA+ ++LL NPDLVA DAV+AFK AIWFWMT Q  KPSCH VI G+WQ
Sbjct: 202 QLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQ 261

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           PS AD AAGR+PGYGVITNIINGGLECGRG D RVADRIGFY+RYC++ G+  G NLDC 
Sbjct: 262 PSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCY 321

Query: 205 NQRSF 210
           NQRSF
Sbjct: 322 NQRSF 326

[Close]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match: AT1G02360.1 (AT1G02360.1 Chitinase family protein)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+  NYNYGPAGRAL  + L NP+ V+ ++V+AF+TA+WFWMTPQ  KPSCHDV+ G+++
Sbjct: 147 QLSWNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYR 206

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           P+AAD AA R  G+G+ TNIINGGLECG   D RV DRIGF++RY  L  +  G NLDC 
Sbjct: 207 PTAADLAANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNLDCE 266

Query: 205 NQRSF 210
           NQR +
Sbjct: 267 NQRPY 271

[Close]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match: AT4G01700.1 (AT4G01700.1 Chitinase family protein)

HSP 1 Score: 165.2 bits (417), Expect = 4.2e-41
Identity = 74/125 (59.20%), Postives = 93/125 (74.40%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+  NYNYG AGRAL  + L NP+LVA ++V+AFKTA+WFWMT Q  KPSCH+V+  R++
Sbjct: 155 QLSWNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYR 214

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           P+ AD AA R  GYG++TNIINGGLECG   D RV DR+G+++RY  L  +  G NLDC 
Sbjct: 215 PTKADRAANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCE 274

Query: 205 NQRSF 210
           NQR F
Sbjct: 275 NQRPF 279

[Close]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match: AT3G16920.1 (AT3G16920.1 chitinase-like protein 2)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 89  NYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMT-PQGNKPSCHDVITGRWQPSA 148
           NYNYG  G AL ++LL +P+ +  +A +AF+ AIW WMT P+ + PS HDV  G+W+P+ 
Sbjct: 207 NYNYGQTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTK 266

Query: 149 ADSAAGRVPGYGVITNIINGGLECGRGADS-RVADRIGFYKRYCDLLGIGY-----GNNL 208
            D+AA R PG+G   N++ G   C  G D+  + + +  Y  Y DL+G+G         L
Sbjct: 267 NDTAAKRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKL 326

Query: 209 DCNNQRSF 210
            C +Q  F
Sbjct: 327 SCADQEPF 334

[Close]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match: AT1G05850.1 (AT1G05850.1 Chitinase family protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21
Identity = 59/176 (33.52%), Postives = 92/176 (52.27%), Query Frame = 1 

Query: 40  FGWCGNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPAGRAL 99
           +G C N +    +  QS C  S     P + G+   G  +  +Y     N+NYG AG AL
Sbjct: 142 WGLCYNRE---MSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYW----NFNYGAAGEAL 201

Query: 100 NLNLLGNPDLVATDAVVAFKTAIWFWMTP-QGNKPSCHDVITGRWQPSAADSAAGRVPGY 159
             +LL +P+ +  +A +AF+ AIW WMTP +  +PS HD+  G W+P+  D+ + R P +
Sbjct: 202 KADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTF 261

Query: 160 GVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGY-----GNNLDCNNQRSF 210
           G   N++ G   CG+G+   + + I  Y  + DL+GIG       + L C  Q+ F
Sbjct: 262 GSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQKPF 310

[Close]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match: gi|222636254|gb|EEE66386.1| (hypothetical protein OsJ_22712 [Oryza sativa Japonica Group])

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68
Identity = 132/230 (57.39%), Postives = 153/230 (66.52%), Query Frame = 1 

Query: 14  VLGGAAEQCGRQANGALCPNRLCCSQFGWCGNTDEYCKNNCQSQCGGST---PSTPPSTG 73
           V+    EQCG QA GALCPN LCCSQ+GWCG+T +YC   CQSQC G     P+ P S G
Sbjct: 3   VVAVRGEQCGSQAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCSGGCGGGPTPPSSGG 62

Query: 74  GSGVGGIISEALYNQMLNNYN------------------------YGPAG-------RAL 133
           GSGV  IIS +L++QML + N                        +   G        A+
Sbjct: 63  GSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREAI 122

Query: 134 NLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRVPGYG 193
             +LL NPDLVA+DA V+FKTA WFWMTPQ  KPSCH VITG+W PSA D AAGRVPGYG
Sbjct: 123 GSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYG 182

Query: 194 VITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
            ITNIINGG+ECG GAD +VADRIGFYKRYCD+LG+ YG+NLDC NQR +
Sbjct: 183 EITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 232

[Close]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match: gi|7435357|pir||T07838 (chitinase (EC 3.2.1.14) - cucurbit)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66
Identity = 132/174 (75.86%), Postives = 136/174 (78.16%), Query Frame = 1 

Query: 40  FGWC----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPA 99
           +G+C     N D YC  N Q  C              G G I       Q+ +NYNYGPA
Sbjct: 152 WGYCFIRERNQDVYCSPNQQWPCAAGQKYY-------GRGPI-------QLTHNYNYGPA 211

Query: 100 GRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 159
           GRALNLNLL NPDLVATD VVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV
Sbjct: 212 GRALNLNLLNNPDLVATDPVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 271

Query: 160 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF
Sbjct: 272 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 311

[Close]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match: gi|573945921|ref|XP_006655297.1| (PREDICTED: chitinase 9 [Oryza brachyantha])

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-66
Identity = 128/211 (60.66%), Postives = 148/211 (70.14%), Query Frame = 1 

Query: 2   KLHTLIVLAFAFVLGGAAEQCGRQANGALCPNRLCCSQFGWCGNTDEY---CKNNCQSQC 61
           K+  L+V A A      AEQCG QA GALCPN LCCS+FGWCG+  +Y   C  + +  C
Sbjct: 6   KVLALLVAAAALAAHAGAEQCGSQAGGALCPNCLCCSRFGWCGSKSDYAVYCVPSAEWPC 65

Query: 62  GGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAF 121
                   P     G G I       Q+  NYNYGPAG A+  +LL NP+LVATD VV+F
Sbjct: 66  A-------PGKKYFGRGPI-------QLSYNYNYGPAGEAIGEDLLNNPELVATDPVVSF 125

Query: 122 KTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRVPGYGVITNIINGGLECGRGADSR 181
           KTA+WFWMTPQ  KPSCHDV+TGRW P++ D AAGRVPGYGVITNIINGGLECG G D R
Sbjct: 126 KTALWFWMTPQAPKPSCHDVVTGRWTPTSGDVAAGRVPGYGVITNIINGGLECGHGPDDR 185

Query: 182 VADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           VA+RIGFY+RYCD+LGIGYG+NLDC  QR F
Sbjct: 186 VANRIGFYQRYCDVLGIGYGSNLDCYGQRPF 202

[Close]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match: gi|89275293|gb|ABD66068.1| (chitinase [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-59
Identity = 120/174 (68.97%), Postives = 128/174 (73.56%), Query Frame = 1 

Query: 40  FGWC----GNTDEYCKNNCQSQCGGSTPSTPPSTGGSGVGGIISEALYNQMLNNYNYGPA 99
           +G+C     N D YC  N Q  C        P     G G I       Q+ +NYNYGPA
Sbjct: 154 WGYCFIRERNQDTYCSPNQQWPCA-------PGQKYYGRGPI-------QLTHNYNYGPA 213

Query: 100 GRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQPSAADSAAGRV 159
           GRAL LNLL NPD VATD  V+FKTAIWFWMTPQGNKPS HDVI G+WQPS ADSAAGRV
Sbjct: 214 GRALGLNLLNNPDSVATDPTVSFKTAIWFWMTPQGNKPSSHDVIIGKWQPSGADSAAGRV 273

Query: 160 PGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCNNQRSF 210
           PGYGVITNIINGGLECGRG DSRVADRIGF+KRYCD+L IGYGNNLDCNNQR F
Sbjct: 274 PGYGVITNIINGGLECGRGPDSRVADRIGFFKRYCDILRIGYGNNLDCNNQRPF 313

[Close]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match: gi|778719872|ref|XP_004134832.2| (PREDICTED: chitinase 1-like [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-59
Identity = 103/125 (82.40%), Postives = 115/125 (92.00%), Query Frame = 1 

Query: 85  QMLNNYNYGPAGRALNLNLLGNPDLVATDAVVAFKTAIWFWMTPQGNKPSCHDVITGRWQ 144
           Q+ +NYNYGPAG AL+LNLL NPDLVAT+A+++FK AIWFWMTPQGNKPSCH+VITG WQ
Sbjct: 192 QLTHNYNYGPAGNALSLNLLSNPDLVATNAIISFKAAIWFWMTPQGNKPSCHNVITGNWQ 251

Query: 145 PSAADSAAGRVPGYGVITNIINGGLECGRGADSRVADRIGFYKRYCDLLGIGYGNNLDCN 204
           PS+ D AAGRVPGYGVITNIINGGLECG G DSRV DRIGFYKRYCD+LGIGYG+NLDCN
Sbjct: 252 PSSIDRAAGRVPGYGVITNIINGGLECGHGPDSRVEDRIGFYKRYCDMLGIGYGSNLDCN 311

Query: 205 NQRSF 210
           NQ+SF
Sbjct: 312 NQQSF 316

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g10480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHIT_CARPA9.7e-5674.40Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI3_SOLTU1.3e-5560.57Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1[more]
CHIC_SOLLC2.8e-5560.57Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1[more]
CHI1_SOLTU3.7e-5560.00Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1[more]
CHI2_SOLTU8.2e-5559.43Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1[more]
BLAST of Cp4.1LG10g10480 vs. TrEMBL
Match NameE-valueIdentityDescription
K4D1N1_SOLLC2.6e-7161.06Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
B9FQZ4_ORYSJ1.6e-6857.39Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22712 PE=4 SV=1[more]
O80404_9ROSI8.5e-6775.86Chitinase OS=Cucurbita cv. Ebisu Nankin GN=chitP1 PE=2 SV=1[more]
Q207U1_MOMCH1.0e-5968.97Chitinase OS=Momordica charantia GN=ChiA PE=3 SV=1[more]
A0A0A0KGV0_CUCSA5.0e-5982.40Uncharacterized protein OS=Cucumis sativus GN=Csa_6G508020 PE=3 SV=1[more]
BLAST of Cp4.1LG10g10480 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12500.11.1e-5273.60 basic chitinase[more]
AT1G02360.12.9e-4260.00 Chitinase family protein[more]
AT4G01700.14.2e-4159.20 Chitinase family protein[more]
AT3G16920.13.0e-2339.84 chitinase-like protein 2[more]
AT1G05850.14.8e-2133.52 Chitinase family protein[more]
BLAST of Cp4.1LG10g10480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|222636254|gb|EEE66386.1|2.2e-6857.39hypothetical protein OsJ_22712 [Oryza sativa Japonica Group][more]
gi|7435357|pir||T078381.2e-6675.86chitinase (EC 3.2.1.14) - cucurbit[more]
gi|573945921|ref|XP_006655297.1|1.6e-6660.66PREDICTED: chitinase 9 [Oryza brachyantha][more]
gi|89275293|gb|ABD66068.1|1.5e-5968.97chitinase [Momordica charantia][more]
gi|778719872|ref|XP_004134832.2|7.2e-5982.40PREDICTED: chitinase 1-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004568chitinase activity
Vocabulary: Biological Process
TermDefinition
GO:0016998cell wall macromolecule catabolic process
GO:0006032chitin catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR023346Lysozyme-like_dom_sf
IPR018371Chitin-binding_1_CS
IPR001002Chitin-bd_1
IPR000726Glyco_hydro_19_cat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
biological_process GO:0006952 defense response
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004568 chitinase activity
molecular_function GO:0008061 chitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g10480.1Cp4.1LG10g10480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000726Glycoside hydrolase, family 19, catalyticPFAMPF00182Glyco_hydro_19coord: 85..203
score: 8.9
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00774CHITINASE_19_2coord: 116..126
scor
IPR001002Chitin-binding, type 1PRODOMPD000609coord: 20..58
score: 3.0
IPR001002Chitin-binding, type 1PRINTSPR00451CHITINBINDNGcoord: 44..51
score: 3.7E-6coord: 29..37
score: 3.7E-6coord: 37..44
score: 3.
IPR001002Chitin-binding, type 1GENE3DG3DSA:3.30.60.10coord: 20..59
score: 6.3
IPR001002Chitin-binding, type 1PFAMPF00187Chitin_bind_1coord: 21..58
score: 4.2
IPR001002Chitin-binding, type 1SMARTSM00270ChitinBD_3coord: 21..58
score: 6.4
IPR001002Chitin-binding, type 1PROFILEPS50941CHIT_BIND_I_2coord: 19..60
score: 10
IPR001002Chitin-binding, type 1unknownSSF57016Plant lectins/antimicrobial peptidescoord: 21..65
score: 8.64
IPR018371Chitin-binding, type 1, conserved sitePROSITEPS00026CHIT_BIND_I_1coord: 31..50
scor
IPR023346Lysozyme-like domainunknownSSF53955Lysozyme-likecoord: 86..209
score: 9.28
NoneNo IPR availableGENE3DG3DSA:1.10.530.10coord: 85..209
score: 3.4
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 3..209
score: 1.6E
NoneNo IPR availablePANTHERPTHR22595:SF34BASIC ENDOCHITINASE Bcoord: 3..209
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g10480ClCG10G000380Watermelon (Charleston Gray)cpewcgB059
Cp4.1LG10g10480Lsi01G005430Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g10480MELO3C013736.2Melon (DHL92) v3.6.1cpemedB076
Cp4.1LG10g10480MELO3C007961.2Melon (DHL92) v3.6.1cpemedB080
Cp4.1LG10g10480CsaV3_3G000410Cucumber (Chinese Long) v3cpecucB0074
Cp4.1LG10g10480CsaV3_6G047720Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g10480Bhi03G000576Wax gourdcpewgoB0097
Cp4.1LG10g10480CsGy6G031920Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g10480CsGy3G000360Cucumber (Gy14) v2cgybcpeB295
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g10480Cp4.1LG19g08590Cucurbita pepo (Zucchini)cpecpeB076
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g10480Cucurbita pepo (Zucchini)cpecpeB066
Cp4.1LG10g10480Cucumber (Gy14) v1cgycpeB0033
Cp4.1LG10g10480Cucumber (Gy14) v1cgycpeB0843
Cp4.1LG10g10480Cucurbita maxima (Rimu)cmacpeB557
Cp4.1LG10g10480Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g10480Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g10480Cucurbita moschata (Rifu)cmocpeB511
Cp4.1LG10g10480Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g10480Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g10480Wild cucumber (PI 183967)cpecpiB064
Cp4.1LG10g10480Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g10480Cucumber (Chinese Long) v2cpecuB069
Cp4.1LG10g10480Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g10480Bottle gourd (USVL1VR-Ls)cpelsiB066
Cp4.1LG10g10480Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g10480Watermelon (97103) v1cpewmB063
Cp4.1LG10g10480Watermelon (97103) v1cpewmB073
Cp4.1LG10g10480Melon (DHL92) v3.5.1cpemeB058
Cp4.1LG10g10480Melon (DHL92) v3.5.1cpemeB060
Cp4.1LG10g10480Silver-seed gourdcarcpeB0554
Cp4.1LG10g10480Silver-seed gourdcarcpeB0482
Cp4.1LG10g10480Silver-seed gourdcarcpeB0913
Cp4.1LG10g10480Wax gourdcpewgoB0071