Cp4.1LG10g10390 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGATAGCCAACTATTCGAAGCGGGGGGAAAAGAAAGAACCACCCGCCACCAGCTGACGCAGGAGGACGGGAGGTCTGAAAATCACAGAGAGTAAAAAGAGGGGAGAAGAGGGTTGTGGGAAAGGGCATAGCAATCAGCAATCCCAAACCCCACCATTCAACCATCCATCAAAATTTGTAGAACTTTACAGTCTATTTGGTATATATAATTTGTAATTATCTCTGATTACCCTTACAAACTTGCGATTGTTTTACAAGGAAACTTCCCCCCTTTTCTCCCTTTATTATTTTTTCCTTCTAATCCAAACCCATCAAAGGAATCAACCCAGGAGAGAGATTCTAGCTTACCCAGATCGATCGATCGATCCCTTTCGAACCCTGATCGGATCGTTTCGGATCGGTGTAATTTGAGTGAACAACATGTCGTGTTCGTCTTCATCGGGGTCTGAGGATGATGAGGGAGTCGATTCTTACAGGAAAGGAGGATATCATGGGGTGAGGATCGGCGATCATTTCGCTGGTGGCCGCTATGTCGCTCAGAGAAAGCTCGGTTGGGGTCAGTTCTCCACCGTCTGGCTCGCCTATGATACTCGCACCTCTGTACGTTTCCCCCCCAACCCCATCATGTGTTTGATCATTTGCTTTGATCTTCGTTTTCTCATGAATCTTGATTCTATTACGCTGTTTCGCTATTTCGTATCAGTTCTGCTGCATTTTGTAGATTTCGTGATTTTTTTATGAACTTGTGCGGTTTATTTGGATCTGGGCGGTGATGCCCATTCTGGCATACGTTTCTTAGCTTAGTTTGTTAGATCTTCATGATATAACTCTCATTTATTTCTGCTTCTTTCCCTTTTATCATTAATTCGATGTTTTTGTTTTCCCCTCCTACGACCATGCCTGGTTGGAACGTTTAGAGCATTTGATGTGCGGTTCCTATTATGATTAACATCCACATTTTCCATTTATGGATATGGATATCGGTTTTTGATCTAAGTTAGTAACTTAGCAATCTTCATTAAGTTTTCGTATTGACCAGATGCTGTTGAAAATCATTCAAATTGTTCAATGTACTCTAAGAATGAATGGGAGAACAGGAAAGTAGCTGGGTGATGAGGGATTAAAAGACTCCTGGTTGGCTTTAATGTTTGAAGGGCTAGGCTAGCATTTTGGAAAAATGACATGGTTATACAGGGACTCGACCGCCANTGGTTATACAGGGACTCCACCGCCATTTTCTCCATCAACTTGCAACTGGGCCTACTTGTAANATGACATGGTTATACAGGGACTCGACCGCCATTTTCTCCATCAACTTGCAACTGGGCCTACTTGTAAAAGTGTTTCAGGATGGTTTCAACTATTTGTAAGAAAATAAATGTTGTAGAGGATTACAAGAAGGATCGGGGAGGCAAACTCGCAAAATTAGCCGAATGAGTGCGACGTTTTTTCCAATAGATTTGATTGTCAGATGAAGGGAAATAGGCATTTAGATTCAGGAAAAGTATTGTTGTGGGCTTTAATCTTTGGTAGATTATATATAATGTTGTTTCTTGTTTCTAATTTTTCCTTTTTTTTCCCTTAGNGGCTTTATATATAATGTTGTTTCTTGTTAATATCTCTAAATTGTGGTGGTGGCAGTATGTTTTCTGGTGTTCTAATATTTCCTTTTTTTCCCCTTAGAAATATGTATCACTTAAGATCCAGAAAAGTGCTCCANTGCTTTAATCTTTGGTAGATTATATATAATGTTGTTTCTTGTTTCTAATTTTTCCTTTTTTTTCCCTTAGAAATATGTATCACTTAAGATCCAGAAAAGTGCTCCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCAGCAATTTCAGATAGTGATCCTTCGAGCTCCAAGTGCATTGTGCAACTGATTGATCATTTTAAGCATTCAGGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTNGGCAATTTCAGATAGTGATCCTTCAAGCTCTAAGTGCATTGTGCAATTGATTGATCATTTTAAGCATGCAGGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTNCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCGGCAATTTCAGATAGTGATCCTTCAAGCTCTAAGTGCATTGTGCAATTGATTGATCATTTTAAGCATGCAGGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTTGGCGATAGCTTACTTCGGTTGATCAAGTATAACCGTTATAAAGTTCTTGAGTTGAATAAAGTGAGGGAGATCTGCAAATGTATTTTGGTTGCTCTGGATTATTTGCACAGAGAACTTGGCATTATCCACGCTGATCTGAAACCTGAAAATATTCTTCTATTGTCCACCATTGACCCTACCAAAGATCCTGTGAGGTCTGGACAGGCCCCTATTCTTGAAAAACCCGAGGGGAACCCGATTGGAGGAACCATGAATCTTATTGAGAAGAAATTGAAAAGAAGAGCCAGGAGAGCAGTTTCGAGGATCTCCGAAAAGCGAGCTTCTATGGGAGGAGCAACCGCAAAGCCTGATGAGAGAAAACTAGATGGCGTTGATCTGAGGTGCAAGATTGTCGATTTCGGTAATGCGTGTCGGGCAGATAGGCAGTTTATGGAAGAGATCCAAACAAGACAATACAGAGCTCCTGAAGTCATACTGCAGTCCGGATATTCCTACCCGGTTGACATGTGGTCATTTGGTTGCATTGCTTTTGAACTTGCCACAGGTGACATGATGTTTACCCCAAAAGAAGGACAAGACTATAGCGAGGACGAGGTAACGATGATTGCTAATGACAATTTCTTAGCAATATAGATTCTTAGAACTTATCATTATTAGCTGATTCCAAAGACATTTTTTATTATACCATGTCATGTTTTATTCTTATTTCAAAAATAGTGAGAAGGTATGGTCAATATAATAGGTCATAAGCATGTCCTCTAGTTTTGCTTTTTCTGAACCGATGAGTAGATAGTACCTTGTGAGATCTCACATCGGTTAGAGTGGGGAACGAAACATTCTTTATAAGGGTGTAGGAACTCCTCTCTAGTAGACGCGTTTTAAAACTTTGAAGGGAAACTCGGAAGATAAAACCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTGAACTGTTATAAACCAACGGCATGCGATCAAAAGTGTTGGATTAGGATTGAAGCAACTCCATCACTTGTCTAAGAGTTCATGTGTTCATATGCACGCATGGGGATGTCTGTTTACAGTAGTACTGACGATGTCGAAATGAGGGTGGGAGCTGTTATTTTGTTTGATAATGCTTTATCTTTACGAGCATTTCGAGCCTCATTTAATTAAACTATATGCAAGTATGGAAAATGTGAAAAGGTACAAGTTTGATATTTCATTACATCATCAAGTTTCTGTTTTGGTCACGCATTCGAATTCTTCAATTTGCTGCTTTCAGGATCATCTTGCATTGATGATGGAACTCCTTGGGAAGATGCCTAAAAAGGTAAGTCACAGCACATCAAACTTCTCCTTATAGCTTCTTAATACCTCTCAATTTCGATTTCTCATATGTTTGGCTCGGCACCCAGATTGCAATAGGAGGAGCTCGATCGAAAGACTACTTTGACAGGCACGGGGACCTAAAAAGGATTCGGAGGCTGAAATTCTGGTCTCTCGATAAACTGCTGGTCGAGAAATATAAACTTTCGGAAGCTGATGCTCAAGCTTTTGCCGAGTTTCTCTGTCCCCTTCTCGATTTCGCTCCAGAGAAGCGACCAACTGCTCAGCAATGCCTGCAGCATCCTTGGCTCAATCCTAGGAACATAGCTCAAAACGAATTGAAGAATAAATCAGAGGTTGAAAAGGTGAATGTTGGAATGAGCAAACTCCAGATTAGAGTGGGAAAGTGAAAGACTGGATCGACGACGACACCATTCGACTGCAGAGCAACACTATTTT GGATAGCCAACTATTCGAAGCGGGGGGAAAAGAAAGAACCACCCGCCACCAGCTGACGCAGGAGGACGGGAGGTCTGAAAATCACAGAGAGTAAAAAGAGGGGAGAAGAGGGTTGTGGGAAAGGGCATAGCAATCAGCAATCCCAAACCCCACCATTCAACCATCCATCAAAATTTGTAGAACTTTACAGTCTATTTGGTATATATAATTTGTAATTATCTCTGATTACCCTTACAAACTTGCGATTGTTTTACAAGGAAACTTCCCCCCTTTTCTCCCTTTATTATTTTTTCCTTCTAATCCAAACCCATCAAAGGAATCAACCCAGGAGAGAGATTCTAGCTTACCCAGATCGATCGATCGATCCCTTTCGAACCCTGATCGGATCGTTTCGGATCGGTGTAATTTGAGTGAACAACATGTCGTGTTCGTCTTCATCGGGGTCTGAGGATGATGAGGGAGTCGATTCTTACAGGAAAGGAGGATATCATGGGGTGAGGATCGGCGATCATTTCGCTGGTGGCCGCTATGTCGCTCAGAGAAAGCTCGGTTGGGGTCAGTTCTCCACCGTCTGGCTCGCCTATGATACTCGCACCTCTAAATATGTATCACTTAAGATCCAGAAAAGTGCTCCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCAGCAATTTCAGATAATAGTGATCCTTCAAGCTCTAAGTGCATTGTGCAATTGATTGATCATTTTAAGCATGCAGGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTNCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCGGCAATTTCAGATAGTGATCCTTCAAGCTCTAAGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTTGGCGATAGCTTACTTCGGTTGATCAAGTATAACCGTTATAAAGTTCTTGAGTTGAATAAAGTGAGGGAGATCTGCAAATGTATTTTGGTTGCTCTGGATTATTTGCACAGAGAACTTGGCATTATCCACGCTGATCTGAAACCTGAAAATATTCTTCTATTGTCCACCATTGACCCTACCAAAGATCCTGTGAGGTCTGGACAGGCCCCTATTCTTGAAAAACCCGAGGGGAACCCGATTGGAGGAACCATGAATCTTATTGAGAAGAAATTGAAAAGAAGAGCCAGGAGAGCAGTTTCGAGGATCTCCGAAAAGCGAGCTTCTATGGGAGGAGCAACCGCAAAGCCTGATGAGAGAAAACTAGATGGCGTTGATCTGAGATTAGAGTGGGAAAGTGAAAGACTGGATCGACGACGACACCATTCGACTGCAGAGCAACACTATTTT ATGTCGTGTTCGTCTTCATCGGGGTCTGAGGATGATGAGGGAGTCGATTCTTACAGGAAAGGAGGATATCATGGGGTGAGGATCGGCGATCATTTCGCTGGTGGCCGCTATGTCGCTCAGAGAAAGCTCGGTTGGGGTCAGTTCTCCACCGTCTGGCTCGCCTATGATACTCGCACCTCTAAATATGTATCACTTAAGATCCAGAAAAGTGCTCCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCAGCAATTTCAGATAATAGTGATCCTTCAAGCTCTAAGTGCATTGTGCAATTGATTGATCATTTTAAGCATGCAGGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTNCACAATTTGCTGAAGCTGCCCGTCATGAAATCGAAGTTCTTTCGGCAATTTCAGATAGTGATCCTTCAAGCTCTAAGGCCAAATGGGCAACATCCGTGCATGGTTCTTGAATTTCTTGGCGATAGCTTACTTCGGTTGATCAAGTATAACCGTTATAAAGTTCTTGAGTTGAATAAAGTGAGGGAGATCTGCAAATGTATTTTGGTTGCTCTGGATTATTTGCACAGAGAACTTGGCATTATCCACGCTGATCTGAAACCTGAAAATATTCTTCTATTGTCCACCATTGACCCTACCAAAGATCCTGTGAGGTCTGGACAGGCCCCTATTCTTGAAAAACCCGAGGGGAACCCGATTGGAGGAACCATGAATCTTATTGAGAAGAAATTGAAAAGAAGAGCCAGGAGAGCAGTTTCGAGGATCTCCGAAAAGCGAGCTTCTATGGGAGGAGCAACCGCAAAGCCTGATGAGAGAAAACTAGATGGCGTTGATCTGAGATTAGAGTGGGAAAGTGAAAGACTGGATCGACGACGACACCATTCGACTGCAGAGCAACACTATTTT MSCSSSSGSEDDEGVDSYRKGGYHGVRIGDHFAGGRYVAQRKLGWGQFSTVWLAYDTRTSKYVSLKIQKSAPQFAEAARHEIEVLSAISDNSDPSSSKCIVQLIDHFKHAGPNGQHPCMVLEFLHNLLKLPVMKSKFFRQFQIVILQALRPNGQHPCMVLEFLGDSLLRLIKYNRYKVLELNKVREICKCILVALDYLHRELGIIHADLKPENILLLSTIDPTKDPVRSGQAPILEKPEGNPIGGTMNLIEKKLKRRARRAVSRISEKRASMGGATAKPDERKLDGVDLRLEWESERLDRRRHHSTAEQHYF
BLAST of Cp4.1LG10g10390 vs. Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=2 SV=3) HSP 1 Score: 137.5 bits (345), Expect = 2.5e-31 Identity = 95/280 (33.93%), Postives = 142/280 (50.71%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. Swiss-Prot
Match: SPK1_CAEBR (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis briggsae GN=spk-1 PE=3 SV=2) HSP 1 Score: 135.6 bits (340), Expect = 9.5e-31 Identity = 97/280 (34.64%), Postives = 144/280 (51.43%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. Swiss-Prot
Match: SRPK1_MOUSE (SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 4.7e-30 Identity = 103/276 (37.32%), Postives = 139/276 (50.36%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. Swiss-Prot
Match: SRPK2_HUMAN (SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3) HSP 1 Score: 130.6 bits (327), Expect = 3.0e-29 Identity = 100/292 (34.25%), Postives = 144/292 (49.32%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. Swiss-Prot
Match: SRPK2_MOUSE (SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 3.0e-29 Identity = 100/292 (34.25%), Postives = 144/292 (49.32%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TrEMBL
Match: D7SWB3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02130 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.5e-91 Identity = 190/292 (65.07%), Postives = 210/292 (71.92%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TrEMBL
Match: W9S9P9_9ROSA (Serine/threonine-protein kinase SRPK OS=Morus notabilis GN=L484_007065 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 4.3e-91 Identity = 192/293 (65.53%), Postives = 209/293 (71.33%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TrEMBL
Match: B9S6V7_RICCO (Srpk, putative OS=Ricinus communis GN=RCOM_0874710 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 3.1e-89 Identity = 186/293 (63.48%), Postives = 213/293 (72.70%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TrEMBL
Match: A0A0B0NEV3_GOSAR (Serine/threonine-protein kinase SRPK OS=Gossypium arboreum GN=F383_15337 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 7.7e-88 Identity = 188/297 (63.30%), Postives = 205/297 (69.02%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TrEMBL
Match: D7L9F6_ARALL (Kinase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_343373 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87 Identity = 186/297 (62.63%), Postives = 210/297 (70.71%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TAIR10
Match: AT2G17530.1 (AT2G17530.1 Protein kinase superfamily protein) HSP 1 Score: 230.3 bits (586), Expect = 1.6e-60 Identity = 152/294 (51.70%), Postives = 191/294 (64.97%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TAIR10
Match: AT4G35500.2 (AT4G35500.2 Protein kinase superfamily protein) HSP 1 Score: 222.6 bits (566), Expect = 3.3e-58 Identity = 145/296 (48.99%), Postives = 184/296 (62.16%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TAIR10
Match: AT3G44850.1 (AT3G44850.1 Protein kinase superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 3.0e-51 Identity = 122/305 (40.00%), Postives = 165/305 (54.10%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TAIR10
Match: AT3G53030.1 (AT3G53030.1 ser/arg-rich protein kinase 4) HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. TAIR10
Match: AT5G22840.1 (AT5G22840.1 Protein kinase superfamily protein) HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38 Identity = 109/295 (36.95%), Postives = 156/295 (52.88%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. NCBI nr
Match: gi|225438452|ref|XP_002277212.1| (PREDICTED: SRSF protein kinase 1 [Vitis vinifera]) HSP 1 Score: 343.6 bits (880), Expect = 3.7e-91 Identity = 190/292 (65.07%), Postives = 210/292 (71.92%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. NCBI nr
Match: gi|703125196|ref|XP_010103247.1| (Serine/threonine-protein kinase SRPK [Morus notabilis]) HSP 1 Score: 342.8 bits (878), Expect = 6.2e-91 Identity = 192/293 (65.53%), Postives = 209/293 (71.33%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. NCBI nr
Match: gi|255561431|ref|XP_002521726.1| (PREDICTED: SRSF protein kinase 1 [Ricinus communis]) HSP 1 Score: 336.7 bits (862), Expect = 4.5e-89 Identity = 186/293 (63.48%), Postives = 213/293 (72.70%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. NCBI nr
Match: gi|729468865|ref|XP_010526854.1| (PREDICTED: SRSF protein kinase 2-like [Tarenaya hassleriana]) HSP 1 Score: 333.6 bits (854), Expect = 3.8e-88 Identity = 189/295 (64.07%), Postives = 208/295 (70.51%), Query Frame = 1
BLAST of Cp4.1LG10g10390 vs. NCBI nr
Match: gi|728830856|gb|KHG10299.1| (Serine/threonine-protein kinase SRPK [Gossypium arboreum]) HSP 1 Score: 332.0 bits (850), Expect = 1.1e-87 Identity = 188/297 (63.30%), Postives = 205/297 (69.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |