Cp4.1LG10g08900 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTCCGAGAGGAATTATGGGGTTATATTACTCTGAGTTCTAGTTGGTCTCCCTCCCTTCTTTTCACTTCTTTCCCCTTTTGGTATATTTTATTTATCAATGAAATTTGTTCCTTGCTCGTAAAAGATTTATTTATAATTGGCACAACAGCTTAGTTGCATGCTTGAATGACGGGTGATTCCTATCATGATTGTGCTAGTATACTTATCCATTTCATGACTTATTGTAGTCAAACTTTATATTTGTATTTTTCAGGAATTGACATATGATATTAGAGAACTTGAGAACCAAAAGGATCATCTGGAAGCAGAACTGGAAAAGGTTGGGTTTCTTTTTCTGTCATGTTCAATAGACTCTTTCTTGTGACTGCAATCCGTTCTTTTTTTTTTTTCTTTTTTTTCTGTTGTTTCGTACATTCATTCTCTTGCCAATCTAGTTTCCTTGCTTCTATGATTACTTGCTGAGCTTTCATTTTTTCCATTCCAATGGGAAGTTGGTGATATACGCTTTATGAGTTACTATAGTATGTGTTCAATGAGAATCATTGATGTCTCAACAGCCAACAATGAATACTCTGTAGCTTCTCCCTCCTCAAGATAGAATGAAACCAACTCCAGTACACGAGGCACTAACAGGAGCTTCAAACAGGTGAGAAATCTAGTAAAAACCAAGACTGTTGTGGTATATAGATCATCTTCTTCATGCGTTCAACGCTCTGGAATGGAAAACAAGTCCAACAAAAGTTTGGTATGCAAGTTGAGAAGTTTTTATACGGATTAAAAGAGTTCTTGTGCTTGGTTTTACAGATTTGCCAAAGCTATGATTAAAAGTAGTTATTATCAATGTCCAGTTGATCATCTATATTTGTGAAATCCTCATACAAAAAAACTACAATCTGAATTGTATATGTAGATGATCTTATCATTGCAGAAGATGATATATGGGAAATTCTTAACCTGAAAAAGATGCTAGCAACTGAGTTTGAGATCAAGAACTTGAGAAATTTGAGGTACTCTTTAGGAATGAAGGTGGCATGATCTATGGATGCTATTGTCATTTCTCAGATACATTCTAGACTTGTTAAAGGAGACCAGAAATATTGGGTGTAAACTTGCTGAAACACCTATGGATCCATAGGCCAACACCAAAGTGAAGAGATTTGTCCAATTGACGAGTGCATGTATCGGGAAAGTTCATTTACTTGTCACATATCAAACCAGACATTGCATATTCCGTAAGCTTTGTTAGCAGCACGTTAATAGTCCAAATGAACATAATCTTAGGGTTAATAACAGAATATTAGGATACTTGAATGGTACTTCAGGTCAAGAGTTATTTTTTAAGAAGTCATGAAACAAAATGGTAGCACTCTATACCAATGCCATTTGGGCTTGGGAAAATTAACTTATAGAAGATTTATATCTGGATATAGCTCTTATGTATGGGGAAACTTAGTCACTTAGAGAAGCATTCAGTTGTAGCAAGAAGCAGTCTAGAGGCTAAAAATTAGTGAAGATTTGGACCATCTCTTCCTCCTATGTTTTTTGGCTCAGCTATTATGGTGGAAGATTCTGAAGCCTTCAATTTCACCTGTTATTCCGAGAAGCATTCAGAACTTGATTATCAATTCCCCTGCAGCCAGATGAGTAAGATTGGGGGACAACATAGACGAATTCTAGTTCCAGTAACCTTTAGATTCTTATATTCTCTTATTGATGGACTGAGTTGCGTACAAATATTTGTTTCTCATCTGGGCTATAGGTGTCCAGCCTCCTCCTTTGTTAACTTCATTCCATCACTGGAATAGAGATAGTATTTCCTCTTCNTAGAATTAGAAGGCAGCCAATAAAAAAAGAAATTAAGGAATTAAATAAAAAGTAGAATTGGATTTTCATTGTCAGTTTAATCAATATTCACTGTGCAGCTTTTTCTGCTTCTTTGGGGTGCGATCTTCACCATAATACTTGAACTCTGCTTTTACGTATCAGCTTTTGTGAGCATGTATATGTTTCAGGTCAACACATTGCTGTCTTCTGCTCGTATGCGCCTTCATAATGCAAGAGAAGAAAGAGAGCATTTTGATGAAGCGAGTAGCCAGATGCTTGTGCACTTGAAGACAAAGGTAATCAAGCTGTTGGTTGTGCTCTTGTTCGAACTAATTTCTTCTTTCAATAAAGTGTCAAATTGAATGCCTTTTATTTTCTCCCTTTCATTAGTTTCTCTAATGATTTTCTTTGGTTATAGGAAGATGAGCTGTTCAAATCTGTTGCTTCATATAAAGTAGAAGCCACTGCTGTAAATGCATGTAAAAACTTTTTAGAGAATACATGGGACCTACGAATATCCCAAAGACAAAAAACGGAGGAGCTTGTTGAGTATGTTAACCTTTTTGGTTAAAATATTATTTGAGTTACGTTGCTTGTTTTGGAACCAAAGAGATGGAATCAGCTACCATGTCTTTCCCTTAAGTCTTTTCTATTCTAGTATCAGTAAACTGTTTGATCCTTTGTTTCTTCACTTTTTCAAGTGGTGAGCTGGAAAAATATGGAGATTATTTTGTGAAGTTGGTCATCAGCCTTCTCTCTTCTTACAAGGTACCAGTTATAAGGCTATCTAGTTCACTGATTTTATCTTCAAGAGATGATTTACTGTTTTCTGATTGTCGTGCACATTGGCCTACATTCTCATTAGGAAAAACTGGAGCCCTCACTTTCTTCAATCAGGAAACTTGAGGAAAACTTGAGCTCGATGAAAGAGTATAGTTCTTCTGTTAAAAAAAAACTATTCTTATTGAGAATAACTTTGATATAATTAACCAGGCTGCTGAGACCAACTTTCCTCAGGTCAGATGTCTCGCCCAATACAGATGATGGAAGCTTACATGTCGATCAAGAACGGAGAAAACTCGAAGAGGAATATTTGGATATCGAATCCAAGGTAGTATTATGAATGCTTAGAACTTTCTGTTCACTCATAGGTGTTCATTTGATCCCGTATTTCAAAACTATATTGCATTTTCCACTCACAATCTCTAATTTGTGGCTATGTTTAGCTTTATGTCTTTCTTTGTATTGCATTATCTAATTTAATCTCTCTGGTGTGTCTATTTCCTGGCTTTTCTTTACTGGCCAGTTTGTTTCCACCTTAAGCACTGTGGACACAGTACGAATGCAATTCTATGAAACAAAAGGAGTTGTCAGGTACTAAAATAGTGTTTGACTAGACAAGGAGTTTTCTACTTTTATCTGCCCCTTGACTACTTGACTAATAATTTAGGCACTTTTGGCCACACGCTGAACTTTTGATCCAGGAATTTTGACGAGAAGGTACAAGAGTTATTTGATGCGCTTGAAAAGATAAAACAAGAATTTGAATCCATCAAGAGACCAAAACTGTTGATTGAAACCACAAGGCAAAGGTCAGAGTTAGCGGTCAATGAAAAGTCACATATAGATTCAAGTTCATCTGAACAGACAGCCGAAGTTCGAAGACTAAAATTTGAAGATATTAATGACTCCTTAGCAAAGGGAACAAAGAATTTTAACATGAAAGCAGAAATGGCGAAACCAGATTCGACTGAGGAGGTCGATACAGTTGACTCGAACGAGGAGATAAATGACTGGGAATTTGATGAACTTGGAAGGGACTATGATGCAGCAGCTTCCAACGACCAAAGAAGATGAAACTTCCATCCATCCATCCATCAATCCATCCATCCATCCATCCATCCATCCATCCATCCGGTATGTTGTTGTGTTTAATCATATCTTTATAATTCAATTCCTTATAGTAACACCTACCCATGATAGAAAAATGGTATTATTTACATGGAAGATTCATGAAGCAATAATACAATGATTAAATATATAGTTGTCTTATGCTTGTTTGGGGTGGTGGGTAGTAGCCCCATCGAGAATGTCCTGTGTGTACTGTTGTACATTGTGTAGTGTGGCTTTCTGCTGAAATGGAACAATGATTTATGGT TGTTTCCGAGAGGAATTATGGGGTTATATTACTCTGAGTTCTAGTTGGTCTCCCTCCCTTCTTTTCACTTCTTTCCCCTTTTGGTATATTTTATTTATCAATGAAATTTGTTCCTTGCTCGTAAAAGATTTATTTATAATTGGCACAACAGCTTAGTTGCATGCTTGAATGACGGGTGATTCCTATCATGATTGTGCTAGTATACTTATCCATTTCATGACTTATTGTAGTCAAACTTTATATTTGTATTTTTCAGGAATTGACATATGATATTAGAGAACTTGAGAACCAAAAGGATCATCTGGAAGCAGAACTGGAAAAGGTCAACACATTGCTGTCTTCTGCTCGTATGCGCCTTCATAATGCAAGAGAAGAAAGAGAGCATTTTGATGAAGCGAGTAGCCAGATGCTTGTGCACTTGAAGACAAAGGAAGATGAGCTGTTCAAATCTGTTGCTTCATATAAAGTAGAAGCCACTGCTGTAAATGCATGTAAAAACTTTTTAGAGAATACATGGGACCTACGAATATCCCAAAGACAAAAAACGGAGGAGCTTGTTGATGGTGAGCTGGAAAAATATGGAGATTATTTTGTGAAGTTGGTCATCAGCCTTCTCTCTTCTTACAAGGAAAAACTGGAGCCCTCACTTTCTTCAATCAGGAAACTTGAGGAAAACTTGAGCTCGATGAAAGAGTCAGATGTCTCGCCCAATACAGATGATGGAAGCTTACATGTCGATCAAGAACGGAGAAAACTCGAAGAGGAATATTTGGATATCGAATCCAAGTTTGTTTCCACCTTAAGCACTGTGGACACAGTACGAATGCAATTCTATGAAACAAAAGGAGTTGTCAGGAATTTTGACGAGAAGGTACAAGAGTTATTTGATGCGCTTGAAAAGATAAAACAAGAATTTGAATCCATCAAGAGACCAAAACTGTTGATTGAAACCACAAGGCAAAGGTCAGAGTTAGCGGTCAATGAAAAGTCACATATAGATTCAAGTTCATCTGAACAGACAGCCGAAGTTCGAAGACTAAAATTTGAAGATATTAATGACTCCTTAGCAAAGGGAACAAAGAATTTTAACATGAAAGCAGAAATGGCGAAACCAGATTCGACTGAGGAGGTCGATACAGTTGACTCGAACGAGGAGATAAATGACTGGGAATTTGATGAACTTGGAAGGGACTATGATGCAGCAGCTTCCAACGACCAAAGAAGATGAAACTTCCATCCATCCATCCATCAATCCATCCATCCATCCATCCATCCATCCATCCATCCGGTATGTTGTTGTGTTTAATCATATCTTTATAATTCAATTCCTTATAGTAACACCTACCCATGATAGAAAAATGGTATTATTTACATGGAAGATTCATGAAGCAATAATACAATGATTAAATATATAGTTGTCTTATGCTTGTTTGGGGTGGTGGGTAGTAGCCCCATCGAGAATGTCCTGTGTGTACTGTTGTACATTGTGTAGTGTGGCTTTCTGCTGAAATGGAACAATGATTTATGGT ATGCGCCTTCATAATGCAAGAGAAGAAAGAGAGCATTTTGATGAAGCGAGTAGCCAGATGCTTGTGCACTTGAAGACAAAGGAAGATGAGCTGTTCAAATCTGTTGCTTCATATAAAGTAGAAGCCACTGCTGTAAATGCATGTAAAAACTTTTTAGAGAATACATGGGACCTACGAATATCCCAAAGACAAAAAACGGAGGAGCTTGTTGATGGTGAGCTGGAAAAATATGGAGATTATTTTGTGAAGTTGGTCATCAGCCTTCTCTCTTCTTACAAGGAAAAACTGGAGCCCTCACTTTCTTCAATCAGGAAACTTGAGGAAAACTTGAGCTCGATGAAAGAGTCAGATGTCTCGCCCAATACAGATGATGGAAGCTTACATGTCGATCAAGAACGGAGAAAACTCGAAGAGGAATATTTGGATATCGAATCCAAGTTTGTTTCCACCTTAAGCACTGTGGACACAGTACGAATGCAATTCTATGAAACAAAAGGAGTTGTCAGGAATTTTGACGAGAAGGTACAAGAGTTATTTGATGCGCTTGAAAAGATAAAACAAGAATTTGAATCCATCAAGAGACCAAAACTGTTGATTGAAACCACAAGGCAAAGGTCAGAGTTAGCGGTCAATGAAAAGTCACATATAGATTCAAGTTCATCTGAACAGACAGCCGAAGTTCGAAGACTAAAATTTGAAGATATTAATGACTCCTTAGCAAAGGGAACAAAGAATTTTAACATGAAAGCAGAAATGGCGAAACCAGATTCGACTGAGGAGGTCGATACAGTTGACTCGAACGAGGAGATAAATGACTGGGAATTTGATGAACTTGGAAGGGACTATGATGCAGCAGCTTCCAACGACCAAAGAAGATGA MRLHNAREEREHFDEASSQMLVHLKTKEDELFKSVASYKVEATAVNACKNFLENTWDLRISQRQKTEELVDGELEKYGDYFVKLVISLLSSYKEKLEPSLSSIRKLEENLSSMKESDVSPNTDDGSLHVDQERRKLEEEYLDIESKFVSTLSTVDTVRMQFYETKGVVRNFDEKVQELFDALEKIKQEFESIKRPKLLIETTRQRSELAVNEKSHIDSSSSEQTAEVRRLKFEDINDSLAKGTKNFNMKAEMAKPDSTEEVDTVDSNEEINDWEFDELGRDYDAAASNDQRR
BLAST of Cp4.1LG10g08900 vs. TrEMBL
Match: A0A0A0KX44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G293200 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 7.6e-122 Identity = 239/295 (81.02%), Postives = 267/295 (90.51%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TrEMBL
Match: M5W3C7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022295mg PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 8.0e-55 Identity = 134/268 (50.00%), Postives = 182/268 (67.91%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TrEMBL
Match: I1L8N3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G046300 PE=4 SV=2) HSP 1 Score: 213.0 bits (541), Expect = 4.9e-52 Identity = 132/282 (46.81%), Postives = 182/282 (64.54%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TrEMBL
Match: A0A059DE96_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01215 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 4.1e-51 Identity = 134/286 (46.85%), Postives = 184/286 (64.34%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TrEMBL
Match: A0A061ES28_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022026 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-49 Identity = 124/241 (51.45%), Postives = 171/241 (70.95%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TAIR10
Match: AT2G37370.1 (AT2G37370.1 unknown protein) HSP 1 Score: 179.9 bits (455), Expect = 2.3e-45 Identity = 118/292 (40.41%), Postives = 176/292 (60.27%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. TAIR10
Match: AT5G13560.1 (AT5G13560.1 unknown protein) HSP 1 Score: 165.2 bits (417), Expect = 5.9e-41 Identity = 115/296 (38.85%), Postives = 177/296 (59.80%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. NCBI nr
Match: gi|778693314|ref|XP_011653611.1| (PREDICTED: golgin subfamily B member 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-121 Identity = 239/295 (81.02%), Postives = 267/295 (90.51%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. NCBI nr
Match: gi|700199052|gb|KGN54210.1| (hypothetical protein Csa_4G293200 [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-121 Identity = 239/295 (81.02%), Postives = 267/295 (90.51%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. NCBI nr
Match: gi|778693317|ref|XP_011653612.1| (PREDICTED: restin homolog isoform X2 [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-121 Identity = 239/295 (81.02%), Postives = 267/295 (90.51%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. NCBI nr
Match: gi|659068942|ref|XP_008447377.1| (PREDICTED: intracellular protein transport protein USO1 isoform X2 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 2.1e-120 Identity = 236/295 (80.00%), Postives = 267/295 (90.51%), Query Frame = 1
BLAST of Cp4.1LG10g08900 vs. NCBI nr
Match: gi|659068940|ref|XP_008447372.1| (PREDICTED: myosin-7 isoform X1 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 2.1e-120 Identity = 236/295 (80.00%), Postives = 267/295 (90.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |