Cp4.1LG10g08200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g08200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCopper transporter, putative
LocationCp4.1LG10 : 5162921 .. 5163331 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTATGCCCATGTCTCCTCCAGCCATGGATGGCAGAGATACTCCAATGATGCAGATGAGCTTCTACTGGGGCAAAGAGGCAGTGGTTCTCTTTTCAGGGTGGCCTAAACAGAGTGTTGGCATGTACATACTGGCCTTCTTCTTCATCTTCCTGCTGGCCTTCGCCATCGAGTTCTTGAGCCACACGCAGCCAACCAAGCTTCCCAAGAGCCCTGTTGCCAGCGCCTCCATTCAGGCCCTCGTCTATGCTTTCAGGACAGGGTTGGCTTATCTGGTCATGTTGGCTGTTATGTCCTTCAACGTTGGGATGTTTATAGCGGCTGTGGCAGGGCATAGTCTTGGATATTTTGTTCTCAAACTTCGTGCTCTTACTGCTGGAAAGAGGAGTGATTGTAATGAAGTTTGA

mRNA sequence

ATGGAATCTATGCCCATGTCTCCTCCAGCCATGGATGGCAGAGATACTCCAATGATGCAGATGAGCTTCTACTGGGGCAAAGAGGCAGTGGTTCTCTTTTCAGGGTGGCCTAAACAGAGTGTTGGCATGTACATACTGGCCTTCTTCTTCATCTTCCTGCTGGCCTTCGCCATCGAGTTCTTGAGCCACACGCAGCCAACCAAGCTTCCCAAGAGCCCTGTTGCCAGCGCCTCCATTCAGGCCCTCGTCTATGCTTTCAGGACAGGGTTGGCTTATCTGGTCATGTTGGCTGTTATGTCCTTCAACGTTGGGATGTTTATAGCGGCTGTGGCAGGGCATAGTCTTGGATATTTTGTTCTCAAACTTCGTGCTCTTACTGCTGGAAAGAGGAGTGATTGTAATGAAGTTTGA

Coding sequence (CDS)

ATGGAATCTATGCCCATGTCTCCTCCAGCCATGGATGGCAGAGATACTCCAATGATGCAGATGAGCTTCTACTGGGGCAAAGAGGCAGTGGTTCTCTTTTCAGGGTGGCCTAAACAGAGTGTTGGCATGTACATACTGGCCTTCTTCTTCATCTTCCTGCTGGCCTTCGCCATCGAGTTCTTGAGCCACACGCAGCCAACCAAGCTTCCCAAGAGCCCTGTTGCCAGCGCCTCCATTCAGGCCCTCGTCTATGCTTTCAGGACAGGGTTGGCTTATCTGGTCATGTTGGCTGTTATGTCCTTCAACGTTGGGATGTTTATAGCGGCTGTGGCAGGGCATAGTCTTGGATATTTTGTTCTCAAACTTCGTGCTCTTACTGCTGGAAAGAGGAGTGATTGTAATGAAGTTTGA

Protein sequence

MESMPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLKLRALTAGKRSDCNEV
Homology
[Close]
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-21
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 1 

Query: 1   MESMPMSPPA---MDGRDTP---MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLL 60
           M  MP   P+   M    TP   MM M+F+WGK   VLFSGWP  S GMY L    IFLL
Sbjct: 6   MHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLL 65

Query: 61  AFAIEFLSHTQPTKLPKSPVASASI-QALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGH 120
           A   E+L+H+   ++  S   +A + Q  VY  +TGL+YLVMLAVMSFN G+FI A+AG+
Sbjct: 66  AVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGY 125

[Close]
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.6e-21
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1 

Query: 5   PMSPPAMDGRDTP---MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL 64
           P SP +M         MM M+F+WGK   +LFSGWP  S+GMY+L    +FLLA  +E+L
Sbjct: 8   PSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWL 67

Query: 65  SHTQPTK-LPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 120
           +H+   +    +  A   +Q  VY  +TGLAYLVMLAVMSFN G+FI A+AG ++G+ +
Sbjct: 68  AHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFML 126

[Close]
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 18  MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVASA 77
           MM M+F+WGK   VLFSGWP  S GMY L   F+F LA   E+L+H+   +      A+ 
Sbjct: 41  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANR 100

Query: 78  S---IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 120
           +   IQ  VY  R GLAYLVMLAVMSFN G+F+ A+AGH++G+ +
Sbjct: 101 AAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFML 145

[Close]
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match: COPT3_ORYSJ (Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.1e-19
Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 3   SMPMSPPAMDG--RDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEF 62
           +M M+P A  G  R    M M+FYWGK + +LF+GWP  S GMY LA   +F LA  +EF
Sbjct: 10  AMAMAPAAAGGAGRRKRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEF 69

Query: 63  LSHTQPTKLPKSPVAS---ASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGY 122
           L    P     S + S    +  A V+A R GLAYL+MLA+MSFNVG+ +AAVAGH+ G+
Sbjct: 70  LG--SPRVQESSSLGSRRRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGF 129

[Close]
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match: COPT2_ORYSJ (Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-18
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 1 

Query: 4   MPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSH 63
           M M PP    +    M M+F+WGK   VLF+ WP    GMY LA  F+F LA  +EF  +
Sbjct: 8   MAMPPPPAPVKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGY 67

Query: 64  -TQPTKLPK--SPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVL 122
                +L +  +P A+A+++  V+A R G+AYL+MLA+MSFN G+F+A VAGH+ G+   
Sbjct: 68  RVLEARLARRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAF 127

[Close]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match: A0A0A0KZS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303720 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.4e-47
Identity = 106/150 (70.67%), Postives = 125/150 (83.33%), Query Frame = 1 

Query: 1   MESMP-MSPP----AMDGR--DTPMM-------QMSFYWGKEAVVLFSGWPKQSVGMYIL 60
           M+SMP MSPP    +M+    D+P+M       QMSFYWGK+AV+LF  WPK+S+G+YIL
Sbjct: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60

Query: 61  AFFFIFLLAFAIEFLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMF 120
           AFFFIFLLAFA+EFLSHT P KL KSP+ASAS+QA VYAFRTGLAYLVMLAVMSFN+G+F
Sbjct: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120

Query: 121 IAAVAGHSLGYFVLKLRALTAGKRSDCNEV 137
           IAAVAGH+LG+FV+KLR LTA KR+D NEV
Sbjct: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

[Close]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match: V7B3N9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G113200g PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 73/131 (55.73%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 2   ESMPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL 61
           + MP  P   D     MMQMSFYWG +A VLFSGWP  +VGMYILA  F+FLLA AIE L
Sbjct: 12  QDMPSMPNGTDNNMKSMMQMSFYWGTDATVLFSGWPHNNVGMYILAVIFVFLLAMAIEVL 71

Query: 62  SHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLK 121
           S+    K   SP+    IQA+V+ FR    Y+VMLAVMSFN G+FIAAV GH+LG+F+ K
Sbjct: 72  SNQPLIKPGTSPLLGGLIQAIVHFFRISFVYMVMLAVMSFNGGIFIAAVVGHTLGFFIAK 131

Query: 122 LRALTAGKRSD 133
            RAL    R +
Sbjct: 132 SRALALANREE 142

[Close]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match: B9HC67_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s09430g PE=4 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-29
Identity = 74/130 (56.92%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 4   MPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSH 63
           M MSP  M      MM MSFYWGK+A++LFSGWP  S+GMY+LAFF +FLLA AIE  S 
Sbjct: 20  MHMSPSDM------MMHMSFYWGKDAIILFSGWPNGSLGMYMLAFFCVFLLAAAIEIFSV 79

Query: 64  TQPTKL-PKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLKL 123
           +   K+   +P+A A IQ  VYA R G AY+VMLAVMSFN+G+FIAAVAGH++G+F++K+
Sbjct: 80  SPTAKIGTHNPIAGALIQTCVYAVRMGFAYMVMLAVMSFNLGIFIAAVAGHTVGFFLVKV 139

Query: 124 RALTAGKRSD 133
           RAL    +++
Sbjct: 140 RALAIAYKNE 143

[Close]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match: A0A059D5N5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02737 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28
Identity = 67/132 (50.76%), Postives = 96/132 (72.73%), Query Frame = 1 

Query: 4   MPMSPPAMDGRDTP----MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIE 63
           M MS  + +G D      +M MSFYWGK+A++LFSGWP+Q +GMY+LA FF+F+LA A+E
Sbjct: 1   MSMSNSSSNGYDRVNLKMVMHMSFYWGKDAIILFSGWPEQWLGMYVLALFFVFVLALAVE 60

Query: 64  FLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 123
            LS +   +   +P+A A++QA +Y  +  LAY+VML+VMSFNVG+FI AV GH+ G+F+
Sbjct: 61  VLSVSPKIRTSTNPIAGATMQAAIYGLKMTLAYMVMLSVMSFNVGVFIVAVIGHAFGFFL 120

Query: 124 LKLRALTAGKRS 132
           +K RAL A  ++
Sbjct: 121 VKSRALAAANKA 132

[Close]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match: I3T3C3_MEDTR (Ctr family copper transporter OS=Medicago truncatula GN=MTR_7g066070 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.6e-28
Identity = 72/133 (54.14%), Postives = 88/133 (66.17%), Query Frame = 1 

Query: 4   MPMSP----PAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIE 63
           MPM+P    P  +G     MQMSF+WGK A+VLFSGWP  S+GMYILA  F+F+LA A E
Sbjct: 3   MPMAPGQSMPMSNGTMIMNMQMSFFWGKNAIVLFSGWPNNSLGMYILAILFVFILALAAE 62

Query: 64  FLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 123
            LS+    K   +P+    IQ+ VY FR    YL+MLAVMSFNVG+FIAAV GHSLG+FV
Sbjct: 63  VLSNQPSIKRGTNPLKGGLIQSGVYFFRISFIYLLMLAVMSFNVGIFIAAVLGHSLGFFV 122

Query: 124 LKLRALTAGKRSD 133
            + RA+      D
Sbjct: 123 ARSRAIAVANGED 135

[Close]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-23
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 1 

Query: 1   MESMPMSPPA---MDGRDTP---MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLL 60
           M  MP   P+   M    TP   MM M+F+WGK   VLFSGWP  S GMY L    IFLL
Sbjct: 6   MHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLL 65

Query: 61  AFAIEFLSHTQPTKLPKSPVASASI-QALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGH 120
           A   E+L+H+   ++  S   +A + Q  VY  +TGL+YLVMLAVMSFN G+FI A+AG+
Sbjct: 66  AVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGY 125

[Close]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-22
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1 

Query: 5   PMSPPAMDGRDTP---MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL 64
           P SP +M         MM M+F+WGK   +LFSGWP  S+GMY+L    +FLLA  +E+L
Sbjct: 8   PSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWL 67

Query: 65  SHTQPTK-LPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 120
           +H+   +    +  A   +Q  VY  +TGLAYLVMLAVMSFN G+FI A+AG ++G+ +
Sbjct: 68  AHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFML 126

[Close]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 18  MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVASA 77
           MM M+F+WGK   VLFSGWP  S GMY L   F+F LA   E+L+H+   +      A+ 
Sbjct: 41  MMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANR 100

Query: 78  S---IQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFV 120
           +   IQ  VY  R GLAYLVMLAVMSFN G+F+ A+AGH++G+ +
Sbjct: 101 AAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFML 145

[Close]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 1 

Query: 18  MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL---SHTQPTKLPKSPV 77
           ++  +FYWG    VLFSGWP    GMY LA  F+F LAF  E+L   S     K     +
Sbjct: 29  LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKL 88

Query: 78  ASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLKLRA 125
           A  + +  +Y  ++G +YLV+LAV+SFN G+F+AA+ GH+LG+ V + RA
Sbjct: 89  AKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRA 138

[Close]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1 

Query: 18  MMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSHTQPTKLPKSPVASA 77
           MM M+F+WGK   VLF GWP  S+ MY +    IF+++   E LS     K   + +   
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGG 88

Query: 78  SIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLKLRALTAGKRSDCNEV 137
            +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LG+ +   RA  A   +   EV
Sbjct: 89  LLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEV 147

[Close]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match: gi|659069210|ref|XP_008448687.1| (PREDICTED: copper transporter 2-like [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-48
Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 1 

Query: 1   MESMPMSPPAMDGR--------DTPMM-------QMSFYWGKEAVVLFSGWPKQSVGMYI 60
           M+SMPM PPAM+G         D+P M       QM+FYWGKE V+LF GWPK+S+ +YI
Sbjct: 1   MDSMPMPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALYI 60

Query: 61  LAFFFIFLLAFAIEFLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGM 120
           LAFFFIFLLAFA+EFLSHT P KL KSPVA AS+QA +YAFRTGLAYLVMLAVMSFN+G+
Sbjct: 61  LAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIGI 120

Query: 121 FIAAVAGHSLGYFVLKLRALTAGKRSDCNEV 137
           FIAAVAGH+LG+FV+KLR LT  KR+D NEV
Sbjct: 121 FIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match: gi|778693610|ref|XP_011653663.1| (PREDICTED: copper transporter 2-like [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 9.2e-47
Identity = 106/150 (70.67%), Postives = 125/150 (83.33%), Query Frame = 1 

Query: 1   MESMP-MSPP----AMDGR--DTPMM-------QMSFYWGKEAVVLFSGWPKQSVGMYIL 60
           M+SMP MSPP    +M+    D+P+M       QMSFYWGK+AV+LF  WPK+S+G+YIL
Sbjct: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60

Query: 61  AFFFIFLLAFAIEFLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMF 120
           AFFFIFLLAFA+EFLSHT P KL KSP+ASAS+QA VYAFRTGLAYLVMLAVMSFN+G+F
Sbjct: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120

Query: 121 IAAVAGHSLGYFVLKLRALTAGKRSDCNEV 137
           IAAVAGH+LG+FV+KLR LTA KR+D NEV
Sbjct: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

[Close]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match: gi|593414155|ref|XP_007140450.1| (hypothetical protein PHAVU_008G113200g [Phaseolus vulgaris])

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29
Identity = 73/131 (55.73%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 2   ESMPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFL 61
           + MP  P   D     MMQMSFYWG +A VLFSGWP  +VGMYILA  F+FLLA AIE L
Sbjct: 12  QDMPSMPNGTDNNMKSMMQMSFYWGTDATVLFSGWPHNNVGMYILAVIFVFLLAMAIEVL 71

Query: 62  SHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLK 121
           S+    K   SP+    IQA+V+ FR    Y+VMLAVMSFN G+FIAAV GH+LG+F+ K
Sbjct: 72  SNQPLIKPGTSPLLGGLIQAIVHFFRISFVYMVMLAVMSFNGGIFIAAVVGHTLGFFIAK 131

Query: 122 LRALTAGKRSD 133
            RAL    R +
Sbjct: 132 SRALALANREE 142

[Close]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match: gi|702274111|ref|XP_010044028.1| (PREDICTED: copper transporter 1-like [Eucalyptus grandis])

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29
Identity = 69/133 (51.88%), Postives = 97/133 (72.93%), Query Frame = 1 

Query: 3   SMPMSPPAMDGRD----TPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAI 62
           SM MS  + +G D      MM MSFYWGK+A++LFSGWP+Q +GMY+LA FFIF+LA A+
Sbjct: 15  SMSMSNSSSNGYDGMNMKMMMHMSFYWGKDAIILFSGWPEQRLGMYVLALFFIFVLALAV 74

Query: 63  EFLSHTQPTKLPKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYF 122
           E LS +   +   +P+A A++QA +Y  +  LAY+VML++MSFNVG+FI AV GH+ G+F
Sbjct: 75  EVLSVSPNIRTSTNPIAGATMQAAIYGLKMALAYMVMLSLMSFNVGVFIVAVIGHAFGFF 134

Query: 123 VLKLRALTAGKRS 132
           ++K RAL A  ++
Sbjct: 135 LVKSRALAAANKA 147

[Close]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match: gi|566175385|ref|XP_002309099.2| (hypothetical protein POPTR_0006s09430g [Populus trichocarpa])

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-29
Identity = 74/130 (56.92%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 4   MPMSPPAMDGRDTPMMQMSFYWGKEAVVLFSGWPKQSVGMYILAFFFIFLLAFAIEFLSH 63
           M MSP  M      MM MSFYWGK+A++LFSGWP  S+GMY+LAFF +FLLA AIE  S 
Sbjct: 20  MHMSPSDM------MMHMSFYWGKDAIILFSGWPNGSLGMYMLAFFCVFLLAAAIEIFSV 79

Query: 64  TQPTKL-PKSPVASASIQALVYAFRTGLAYLVMLAVMSFNVGMFIAAVAGHSLGYFVLKL 123
           +   K+   +P+A A IQ  VYA R G AY+VMLAVMSFN+G+FIAAVAGH++G+F++K+
Sbjct: 80  SPTAKIGTHNPIAGALIQTCVYAVRMGFAYMVMLAVMSFNLGIFIAAVAGHTVGFFLVKV 139

Query: 124 RALTAGKRSD 133
           RAL    +++
Sbjct: 140 RALAIAYKNE 143

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g08200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COPT2_ARATH1.0e-2148.41Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1[more]
COPT6_ARATH8.6e-2146.22Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1[more]
COPT1_ARATH1.9e-2050.48Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2[more]
COPT3_ORYSJ8.1e-1946.77Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2 SV=1[more]
COPT2_ORYSJ3.1e-1842.98Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1[more]
BLAST of Cp4.1LG10g08200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZS9_CUCSA6.4e-4770.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303720 PE=4 SV=1[more]
V7B3N9_PHAVU1.6e-2955.73Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G113200g PE=4 SV=1[more]
B9HC67_POPTR2.1e-2956.92Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s09430g PE=4 SV=2[more]
A0A059D5N5_EUCGR1.7e-2850.76Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02737 PE=4 SV=1[more]
I3T3C3_MEDTR6.6e-2854.14Ctr family copper transporter OS=Medicago truncatula GN=MTR_7g066070 PE=2 SV=1[more]
BLAST of Cp4.1LG10g08200 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46900.15.7e-2348.41 copper transporter 2[more]
AT2G26975.14.9e-2246.22 Ctr copper transporter family[more]
AT5G59030.11.1e-2150.48 copper transporter 1[more]
AT2G37925.11.5e-1843.64 copper transporter 4[more]
AT5G59040.11.9e-1842.86 copper transporter 3[more]
BLAST of Cp4.1LG10g08200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069210|ref|XP_008448687.1|3.7e-4868.87PREDICTED: copper transporter 2-like [Cucumis melo][more]
gi|778693610|ref|XP_011653663.1|9.2e-4770.67PREDICTED: copper transporter 2-like [Cucumis sativus][more]
gi|593414155|ref|XP_007140450.1|2.3e-2955.73hypothetical protein PHAVU_008G113200g [Phaseolus vulgaris][more]
gi|702274111|ref|XP_010044028.1|2.3e-2951.88PREDICTED: copper transporter 1-like [Eucalyptus grandis][more]
gi|566175385|ref|XP_002309099.2|3.0e-2956.92hypothetical protein POPTR_0006s09430g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035434 copper ion transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005375 copper ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g08200.1Cp4.1LG10g08200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 1..132
score: 8.6
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 21..119
score: 1.5
NoneNo IPR availablePANTHERPTHR12483:SF41SUBFAMILY NOT NAMEDcoord: 1..132
score: 8.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g08200Cucsa.175910Cucumber (Gy14) v1cgycpeB0482
Cp4.1LG10g08200Cucsa.066760Cucumber (Gy14) v1cgycpeB0095
Cp4.1LG10g08200CmoCh03G003970Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g08200Cla018154Watermelon (97103) v1cpewmB086
Cp4.1LG10g08200Cla017944Watermelon (97103) v1cpewmB062
Cp4.1LG10g08200Csa4G303720Cucumber (Chinese Long) v2cpecuB070
Cp4.1LG10g08200Csa3G733240Cucumber (Chinese Long) v2cpecuB068
Cp4.1LG10g08200MELO3C003197Melon (DHL92) v3.5.1cpemeB062
Cp4.1LG10g08200ClCG10G021610Watermelon (Charleston Gray)cpewcgB056
Cp4.1LG10g08200CSPI03G31810Wild cucumber (PI 183967)cpecpiB063
Cp4.1LG10g08200CSPI04G15360Wild cucumber (PI 183967)cpecpiB065
Cp4.1LG10g08200Lsi01G014950Bottle gourd (USVL1VR-Ls)cpelsiB048
Cp4.1LG10g08200MELO3C003197.2Melon (DHL92) v3.6.1cpemedB082
Cp4.1LG10g08200MELO3C009211.2Melon (DHL92) v3.6.1cpemedB070
Cp4.1LG10g08200CsaV3_3G034410Cucumber (Chinese Long) v3cpecucB0073
Cp4.1LG10g08200CsaV3_4G025720Cucumber (Chinese Long) v3cpecucB0075
Cp4.1LG10g08200Bhi11G001609Wax gourdcpewgoB0068
Cp4.1LG10g08200CsGy4G014730Cucumber (Gy14) v2cgybcpeB463
Cp4.1LG10g08200CsGy3G029640Cucumber (Gy14) v2cgybcpeB294
Cp4.1LG10g08200Carg19963Silver-seed gourdcarcpeB0785
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g08200Wax gourdcpewgoB0085
Cp4.1LG10g08200Cucurbita pepo (Zucchini)cpecpeB071
Cp4.1LG10g08200Cucurbita pepo (Zucchini)cpecpeB072
Cp4.1LG10g08200Cucurbita pepo (Zucchini)cpecpeB084
Cp4.1LG10g08200Cucurbita pepo (Zucchini)cpecpeB093
Cp4.1LG10g08200Cucurbita pepo (Zucchini)cpecpeB105
Cp4.1LG10g08200Cucurbita maxima (Rimu)cmacpeB256
Cp4.1LG10g08200Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g08200Cucurbita maxima (Rimu)cmacpeB809
Cp4.1LG10g08200Cucurbita maxima (Rimu)cmacpeB862
Cp4.1LG10g08200Cucurbita moschata (Rifu)cmocpeB220
Cp4.1LG10g08200Cucurbita moschata (Rifu)cmocpeB653
Cp4.1LG10g08200Cucurbita moschata (Rifu)cmocpeB763
Cp4.1LG10g08200Cucurbita moschata (Rifu)cmocpeB802
Cp4.1LG10g08200Wild cucumber (PI 183967)cpecpiB079
Cp4.1LG10g08200Wild cucumber (PI 183967)cpecpiB082
Cp4.1LG10g08200Cucumber (Chinese Long) v2cpecuB084
Cp4.1LG10g08200Cucumber (Chinese Long) v2cpecuB086
Cp4.1LG10g08200Bottle gourd (USVL1VR-Ls)cpelsiB061
Cp4.1LG10g08200Watermelon (Charleston Gray)cpewcgB078
Cp4.1LG10g08200Melon (DHL92) v3.5.1cpemeB053
Cp4.1LG10g08200Silver-seed gourdcarcpeB0128
Cp4.1LG10g08200Cucumber (Gy14) v2cgybcpeB591
Cp4.1LG10g08200Melon (DHL92) v3.6.1cpemedB066
Cp4.1LG10g08200Silver-seed gourdcarcpeB0220
Cp4.1LG10g08200Silver-seed gourdcarcpeB0365
Cp4.1LG10g08200Silver-seed gourdcarcpeB0825
Cp4.1LG10g08200Silver-seed gourdcarcpeB1383
Cp4.1LG10g08200Cucumber (Chinese Long) v3cpecucB0090
Cp4.1LG10g08200Cucumber (Chinese Long) v3cpecucB0094