Cp4.1LG10g07770 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g07770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMYB-like transcription factor family protein
LocationCp4.1LG10 : 5463523 .. 5465198 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCCGAGTGTGAGGCCGTATGTTCGATCCAAACTCCCTAGACTCCGGTGGACATCCGATCTCCACTCCCGTTTCGTTCATGCCGTTGAAAGACTCGGTGGTCAAGAAAGTAATTTTCTTTTTAAATGGTTCGATTCGAACCGAGTTATAATTCGAGTGGAGAATCGAACGATCGATTTGAATTGAATTTTGTGTTTGATTTTGTTGTGTAGATGCTACTCCTAAGTTGGTTCTTCAGCTAATGAATATCAAAGGATTGAACATAGCTCATGTCAAGAGCCATCTTCAGGTTTGTTAATCTCTCTCTTTTTGTAAGAAATTTATTGAATAATTTGGATTTTGAATTTTGAAATTGTGTTGCTTTCAGATGTATAGAAGCAAGAACACCAATGAATCAAGTCAAGGTATTTATAAACTTGTTCTTATGATTCTATGTTGATTTTCAATTCATTTATTTGAAGTTTTTTTTGAAGAACAGTGATGGATCAAAGGGTTATTATGAATGAAAGTTGTGGAGATCATAACATATTTACTGTCAGCCAAATCCCCATGTTTCAACGCTTCAATCAAAGCTACGCCTCCAATGTTTTTCGGTAAGAACTTCGATTCGAGTTTGAAATAGTAGAAAGTGTTTTGAATTCAAATTAGGACGTACTTTTCAAAATATATTGTGAGATCTCACGTCGGTCCGGAAAGAGAATGGAGTATTCTTTATAAGGGTGTGGAAACTTCTTTCTAGAAGACGGGTTTTAAGAACCTTCAGGGAAAATTTGAAAGAGAAAGCCTAAGGAGAACAATATCTGCTAGCGGTGGGTTTGAGCTGTTATAAATAGTATCTAAGCCAGACACTGGGCGGTGTGCCAGCACGGACGCTGAGCCCTGAAGGGGAGTGAACACAAGGCGGTGTGCCAGCATGGATGCTGAACCTTAGAGGGGGGTGAAAACGAGGAGGTGTGCCAACACGGACGCTGAATCTTAGAGGGGGGTGAAAACGAGGCAGTGTGCCAACACGAACGCTAAGCCCTGAAGGAGGGGTGAACACGAGGTGGTGTGCCAGCGAGGTCGCTGGGCCTTGAAAGGAGGTGGATTATGAGATCCCACATCGGTTAGAGAGGAGAACGAAACATTCTTTATAAGGATGTGAAAACTTCTCCCTAGCAAACGTGTTTTAAAAATCTTGAGAGGAATTCGAAAGAGAATGTTCAAAGATGACAATATCTGTAGTGAGCTTATATGTTTATTTTTTAAAAGTTATTTCAAACTCACTCTACCATCCTATTAGATTTGGCGGGTCAACATGGAATGCTTACGAGACAAAAACAATACAAACCCCATATACCGAGAAGGCGAGATCGAGGCTCTTCGGCAGCAGCAAGAGCGCTACACCGGGAACAACCATCTGCAAGAATCACAGCTCGATCGGTGAACAGAACACGACAACAAGCAAAAGGGAAGAAATGAGAGAAAAGGAAGATCCATGCAGAGACATAATAATTACAGAGAAAAGGAAAACCCCAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAACAGAAGGGATGAAGATTGATAAGAGACGAAGAACACGAGAAGAACACGAACAAGAACACGAAGAACACGAAGAACAACGTAGAACTGATTTAACCCTATCTTTATGCCCATACTAG

mRNA sequence

AAGCCGAGTGTGAGGCCGTATGTTCGATCCAAACTCCCTAGACTCCGGTGGACATCCGATCTCCACTCCCGTTTCGTTCATGCCGTTGAAAGACTCGGTGGTCAAGAAAATGCTACTCCTAAGTTGGTTCTTCAGCTAATGAATATCAAAGGATTGAACATAGCTCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAACACCAATGAATCAAGTCAAGTGATGGATCAAAGGGTTATTATGAATGAAAGTTGTGGAGATCATAACATATTTACTGTCAGCCAAATCCCCATGTTTCAACGCTTCAATCAAAGCTACGCCTCCAATGCGAGATCGAGGCTCTTCGGCAGCAGCAAGAGCGCTACACCGGGAACAACCATCTGCAAGAATCACAGCTCGATCGGTGAACAGAACACGACAACAAGCAAAAGGGAAGAAATGAGAGAAAAGGAAGATCCATGCAGAGACATAATAATTACAGAGAAAAGGAAAACCCCAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAACAGAAGGGATGAAGATTGATAAGAGACGAAGAACACGAGAAGAACACGAACAAGAACACGAAGAACACGAAGAACAACGTAGAACTGATTTAACCCTATCTTTATGCCCATACTAG

Coding sequence (CDS)

AAGCCGAGTGTGAGGCCGTATGTTCGATCCAAACTCCCTAGACTCCGGTGGACATCCGATCTCCACTCCCGTTTCGTTCATGCCGTTGAAAGACTCGGTGGTCAAGAAAATGCTACTCCTAAGTTGGTTCTTCAGCTAATGAATATCAAAGGATTGAACATAGCTCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAACACCAATGAATCAAGTCAAGTGATGGATCAAAGGGTTATTATGAATGAAAGTTGTGGAGATCATAACATATTTACTGTCAGCCAAATCCCCATGTTTCAACGCTTCAATCAAAGCTACGCCTCCAATGCGAGATCGAGGCTCTTCGGCAGCAGCAAGAGCGCTACACCGGGAACAACCATCTGCAAGAATCACAGCTCGATCGGTGAACAGAACACGACAACAAGCAAAAGGGAAGAAATGAGAGAAAAGGAAGATCCATGCAGAGACATAATAATTACAGAGAAAAGGAAAACCCCAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAACAGAAGGGATGAAGATTGATAAGAGACGAAGAACACGAGAAGAACACGAACAAGAACACGAAGAACACGAAGAACAACGTAGAACTGATTTAACCCTATCTTTATGCCCATACTAG

Protein sequence

KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSSKSATPGTTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRKTPDGEIDLSLSLKIAPTEGMKIDKRRRTREEHEQEHEEHEEQRRTDLTLSLCPY
Homology
[Close]
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 4   VRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQM 63
           VRPYVRS +PRLRWT +LH  FVHAV+ LGGQ  ATPKLVL++M++KGL I+HVKSHLQM
Sbjct: 15  VRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQM 74

Query: 64  YRSK------NTNESSQVMDQRVIMNESCGDH 90
           YR           ESS    +R    ++  DH
Sbjct: 75  YRGSRITLLGKPEESSSPSSRRRRRQDNEEDH 106

[Close]
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-18
Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 1 

Query: 11  KLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRSKNTN 70
           + PR+RWT+ LH+RFVHAVE LGG E ATPK VL+LM++K L +AHVKSHLQMYR+  T 
Sbjct: 212 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT 271

Query: 71  ESSQVMDQR--VIMNESCGDHN 91
           + +     +  V  N S GD+N
Sbjct: 272 DKAAASSGQSDVYENGSSGDNN 293

[Close]
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 1 

Query: 11  KLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRS-KNT 70
           + PR+RWTS LH+RFVHAVE LGG E ATPK VL+LM++K L +AHVKSHLQMYR+ K T
Sbjct: 218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT 277

Query: 71  NESSQVMD 78
           N+ +   D
Sbjct: 278 NKPAASSD 285

[Close]
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match: ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 9.3e-17
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 11  KLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRSKNTN 70
           + PR+RWTS LH+RFVHAVE LGG E ATPK VL+LM++K L +AHVKSHLQMYR+  + 
Sbjct: 323 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKST 382

Query: 71  E 72
           +
Sbjct: 383 D 383

[Close]
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match: KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-15
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 11  KLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRSKNTN 70
           + PR+RWT+ LH+ FVHAV+ LGG E ATPK VL+LM+++ L +AHVKSHLQMYR+  + 
Sbjct: 163 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKST 222

Query: 71  E 72
           E
Sbjct: 223 E 223

[Close]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match: A0A0A0L1D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312300 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.2e-40
Identity = 118/225 (52.44%), Postives = 138/225 (61.33%), Query Frame = 1 

Query: 2   PSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHL 61
           P+VRPYVRSKLPRLRWT DLH RFVHAVERLGGQENATPKLVLQLMNIKGL+IAHVKSHL
Sbjct: 59  PTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHL 118

Query: 62  QMYRSKNTNESSQVM-DQRVIMNES-CGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSS 121
           QMYRSK TNE  QV+ DQRV+M ES  GD NIF VSQIPMFQR+N SY SN   R  GSS
Sbjct: 119 QMYRSKKTNEPGQVVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYPSNL-FRFGGSS 178

Query: 122 KSATPGTTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRKTPDGEIDLSLSLKI 181
             A    TI         Q+    K   M         +  + K   P+    ++ +L++
Sbjct: 179 WKAIENKTI---------QSPFMEKSASMTTLTQARSSLFSSNKSNAPE---MINRNLRM 238

Query: 182 APTEGMKIDKRRRTREEHEQEHEEHEEQRR--------TDLTLSL 217
           + +E      +R+   E E    E   Q+R         DL+LSL
Sbjct: 239 SISESNTTTSKRQDEREKEDSCSEIIPQKRKRATDNGEIDLSLSL 270

[Close]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match: A0A118K6Z3_CYNCS (Homeodomain-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010174 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.6e-34
Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           KP +RPYVRSK+PRLRWT DLH RFV AVERLGGQE ATPKLVLQLMNIKGL+IAHVKSH
Sbjct: 51  KPPIRPYVRSKMPRLRWTDDLHLRFVQAVERLGGQERATPKLVLQLMNIKGLHIAHVKSH 110

Query: 61  LQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNAR 113
           LQMYRSK  ++ SQV D R       GD NI+ +SQ+PM   +NQ+Y S  R
Sbjct: 111 LQMYRSKKIDDPSQVADPRT----EDGDRNIYNLSQLPMLHCYNQTYDSAVR 158

[Close]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match: A0A164Z6V7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018677 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           K SVRPYVRSK PRLRWT DLH RFV AVERLGGQE ATPKLVLQLMN+KGLNIAHVKSH
Sbjct: 54  KSSVRPYVRSKTPRLRWTHDLHLRFVQAVERLGGQERATPKLVLQLMNVKGLNIAHVKSH 113

Query: 61  LQMYRSKNTNESSQ-VMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSY 108
           LQMYRSK  ++ +Q + D R +  E+ GD NI+ +SQ+PM Q +NQSY
Sbjct: 114 LQMYRSKKIDDPNQAIADNRSV--ENYGDRNIYNLSQLPMLQSYNQSY 159

[Close]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match: A0A061ERX5_THECC (Myb-like HTH transcriptional regulator family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_021628 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           KPSVRPYVRSK+PRLRWT DLH RF+HAVERLGGQ+ ATPKLVLQLMNIKGL+IAHVKSH
Sbjct: 51  KPSVRPYVRSKMPRLRWTPDLHLRFIHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSH 110

Query: 61  LQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNARS 114
           LQMYRSK  ++  QV+ +   + ES GD NI+ +SQ+PM Q +N  +  ++ S
Sbjct: 111 LQMYRSKKIDDPGQVITEHRHLVES-GDRNIYNLSQLPMLQGYNNHHHGDSSS 162

[Close]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match: M5W4P5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021179mg PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33
Identity = 78/123 (63.41%), Postives = 97/123 (78.86%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           K SVRPYVRSK+PRLRWT DLH RF+HAVERLGGQE ATPKLVLQLMNIKGL+IAHVKSH
Sbjct: 55  KASVRPYVRSKMPRLRWTPDLHLRFIHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSH 114

Query: 61  LQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSSK 120
           LQMYRSK  +++ Q     ++    CGD NI+ +SQ+PM Q +N+S++++ R   +G +K
Sbjct: 115 LQMYRSKKIDDAGQ---GHLV---ECGDKNIYNLSQLPMLQGYNRSHSTSFR---YGDAK 168

Query: 121 SAT 124
           S T
Sbjct: 175 SWT 168

[Close]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match: AT2G38300.1 (AT2G38300.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-33
Identity = 75/130 (57.69%), Postives = 95/130 (73.08%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           K  VRPYVRSK+PRLRWT DLH RFV AVERLGGQE ATPKLV Q+MNIKGL+IAHVKSH
Sbjct: 43  KTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSH 102

Query: 61  LQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNAR--SRLFGS 120
           LQMYRSK  ++  Q +     + E+  D NI+ +SQ+PMF+ +N ++ S  R  S++  +
Sbjct: 103 LQMYRSKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKISNA 162

Query: 121 S--KSATPGT 127
           S   S++ GT
Sbjct: 163 SLWNSSSQGT 172

[Close]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match: AT2G40260.1 (AT2G40260.1 Homeodomain-like superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-28
Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 3   SVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQ 62
           SVRPY RSK PRLRWT +LH  F+ AVERLGG + ATPKLVLQLMN+KGL+IAHVKSHLQ
Sbjct: 73  SVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQ 132

Query: 63  MYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASN 111
           MYRSK T+E ++  DQ        G    + +SQ+PM Q F+Q  +S+
Sbjct: 133 MYRSKKTDEPNE-GDQGFSFEHGAG--YTYNLSQLPMLQSFDQRPSSS 177

[Close]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match: AT2G42660.1 (AT2G42660.1 Homeodomain-like superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1 

Query: 3   SVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQ 62
           +VR Y+RS +PRLRWT DLH  FV AV+RLGG + ATPKLVL++MN+KGL+IAHVKSHLQ
Sbjct: 41  NVRQYIRSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQ 100

Query: 63  MYRSKNTNESSQ 75
           MYRSK    SS+
Sbjct: 101 MYRSKKLEPSSR 112

[Close]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match: AT2G02060.1 (AT2G02060.1 Homeodomain-like superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 54/101 (53.47%), Postives = 66/101 (65.35%), Query Frame = 1 

Query: 4   VRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQM 63
           VRPYVRS +PRLRWT DLH  FVHAVE LGGQ  ATPKLVL++M++KGL I+HVKSHLQM
Sbjct: 21  VRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQM 80

Query: 64  YR--SKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQR 103
           YR  SK T E  +      I      + + +    + +  R
Sbjct: 81  YRGGSKLTLEKPEESSSSSIRRRQDSEEDYYLHDNLSLHTR 121

[Close]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match: AT1G14600.1 (AT1G14600.1 Homeodomain-like superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 4   VRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQM 63
           VRPYVRS +PRLRWT +LH  FVHAV+ LGGQ  ATPKLVL++M++KGL I+HVKSHLQM
Sbjct: 15  VRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQM 74

Query: 64  YRSK------NTNESSQVMDQRVIMNESCGDH 90
           YR           ESS    +R    ++  DH
Sbjct: 75  YRGSRITLLGKPEESSSPSSRRRRRQDNEEDH 106

[Close]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match: gi|659128462|ref|XP_008464219.1| (PREDICTED: probable transcription factor KAN4 isoform X2 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 4.4e-43
Identity = 120/223 (53.81%), Postives = 143/223 (64.13%), Query Frame = 1 

Query: 2   PSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHL 61
           P+VRPYVRSKLPRLRWT DLH RFVHAVERLGGQENATPKLVLQLMNIKGL+IAHVKSHL
Sbjct: 59  PTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHL 118

Query: 62  QMYRSKNTNESSQVMDQRVIMNES-CGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSSK 121
           QMYRSK TNE  QV DQRV+M ES  GD NIF VSQIPMFQR+N SY SN   RL GSS 
Sbjct: 119 QMYRSKKTNEPGQVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYTSNL-FRLGGSSW 178

Query: 122 SATPGTTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRKTPDGEIDLSLSLKIA 181
           +A    TI    S   E++ + +   + R        +  + K   P G I+ +    I+
Sbjct: 179 NAIENNTI---QSPFMEKSASLTTLTQARS------SLFSSNKSNAPPGMINRNPRTSIS 238

Query: 182 PTEGMKIDKRRRTREEHE-------QEHEEHEEQRRTDLTLSL 217
            +  M   KR+  RE+ +       Q+ +   +    DL+LSL
Sbjct: 239 ES-NMTTSKRQEEREKEDPCSDIIPQKRKRATDNGEIDLSLSL 270

[Close]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match: gi|659128458|ref|XP_008464217.1| (PREDICTED: probable transcription factor KAN3 isoform X1 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-42
Identity = 120/224 (53.57%), Postives = 144/224 (64.29%), Query Frame = 1 

Query: 2   PSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHL 61
           P+VRPYVRSKLPRLRWT DLH RFVHAVERLGGQENATPKLVLQLMNIKGL+IAHVKSHL
Sbjct: 59  PTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHL 118

Query: 62  QMYRSKNTNESSQVM-DQRVIMNES-CGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSS 121
           QMYRSK TNE  QV+ DQRV+M ES  GD NIF VSQIPMFQR+N SY SN   RL GSS
Sbjct: 119 QMYRSKKTNEPGQVVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYTSNL-FRLGGSS 178

Query: 122 KSATPGTTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRKTPDGEIDLSLSLKI 181
            +A    TI    S   E++ + +   + R        +  + K   P G I+ +    I
Sbjct: 179 WNAIENNTI---QSPFMEKSASLTTLTQARS------SLFSSNKSNAPPGMINRNPRTSI 238

Query: 182 APTEGMKIDKRRRTREEHE-------QEHEEHEEQRRTDLTLSL 217
           + +  M   KR+  RE+ +       Q+ +   +    DL+LSL
Sbjct: 239 SES-NMTTSKRQEEREKEDPCSDIIPQKRKRATDNGEIDLSLSL 271

[Close]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match: gi|778693848|ref|XP_011653702.1| (PREDICTED: probable transcription factor KAN4 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 124/249 (49.80%), Postives = 148/249 (59.44%), Query Frame = 1 

Query: 2   PSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHL 61
           P+VRPYVRSKLPRLRWT DLH RFVHAVERLGGQENATPKLVLQLMNIKGL+IAHVKSHL
Sbjct: 59  PTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHL 118

Query: 62  QMYRSKNTNESSQVM-DQRVIMNES-CGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSS 121
           QMYRSK TNE  QV+ DQRV+M ES  GD NIF VSQIPMFQR+N SY SN   R  GSS
Sbjct: 119 QMYRSKKTNEPGQVVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYPSNL-FRFGGSS 178

Query: 122 KSATPG--------------TTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRK 181
             A                 TT+ +  SS+   N + +     R       +   T  ++
Sbjct: 179 WKAIENKTIQSPFMEKSASMTTLTQARSSLFSSNKSNAPEMINRNLRMSISESNTTTSKR 238

Query: 182 TPDGEIDLSLSLKIAP------TEGMKID---------KRRRTREEHEQEHEEHEEQRRT 220
             + E + S S +I P      T+  +ID         +     E+   + +E   + RT
Sbjct: 239 QDEREKEDSCS-EIIPQKRKRATDNGEIDLSLSLKIAPREEIKIEKRSIDQDEEVLESRT 298

[Close]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match: gi|700199239|gb|KGN54397.1| (hypothetical protein Csa_4G312300 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40
Identity = 118/225 (52.44%), Postives = 138/225 (61.33%), Query Frame = 1 

Query: 2   PSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHL 61
           P+VRPYVRSKLPRLRWT DLH RFVHAVERLGGQENATPKLVLQLMNIKGL+IAHVKSHL
Sbjct: 59  PTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHL 118

Query: 62  QMYRSKNTNESSQVM-DQRVIMNES-CGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSS 121
           QMYRSK TNE  QV+ DQRV+M ES  GD NIF VSQIPMFQR+N SY SN   R  GSS
Sbjct: 119 QMYRSKKTNEPGQVVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYPSNL-FRFGGSS 178

Query: 122 KSATPGTTICKNHSSIGEQNTTTSKREEMREKEDPCRDIIITEKRKTPDGEIDLSLSLKI 181
             A    TI         Q+    K   M         +  + K   P+    ++ +L++
Sbjct: 179 WKAIENKTI---------QSPFMEKSASMTTLTQARSSLFSSNKSNAPE---MINRNLRM 238

Query: 182 APTEGMKIDKRRRTREEHEQEHEEHEEQRR--------TDLTLSL 217
           + +E      +R+   E E    E   Q+R         DL+LSL
Sbjct: 239 SISESNTTTSKRQDEREKEDSCSEIIPQKRKRATDNGEIDLSLSL 270

[Close]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match: gi|694402861|ref|XP_009376409.1| (PREDICTED: two-component response regulator ARR18-like [Pyrus x bretschneideri])

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 85/144 (59.03%), Postives = 105/144 (72.92%), Query Frame = 1 

Query: 1   KPSVRPYVRSKLPRLRWTSDLHSRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSH 60
           K SVRPYVRSK+PRLRWT DLH RF+HAVERLGGQ+ ATPKLVLQLMNIKGLNIAHVKSH
Sbjct: 57  KTSVRPYVRSKMPRLRWTPDLHLRFIHAVERLGGQDRATPKLVLQLMNIKGLNIAHVKSH 116

Query: 61  LQMYRSKNTNESSQVMDQRVIMNESCGDHNIFTVSQIPMFQRFNQSYASNARSRLFGSSK 120
           LQMYRSK  +++ QV+         CGD NI+ +SQ+PM Q +N+S++++ R   +G + 
Sbjct: 117 LQMYRSKKIDDTGQVLADHQGHLVECGDKNIYNLSQLPMLQGYNRSHSTSFRYGSYGDTN 176

Query: 121 SATPGTTICKNHSSIGEQ-NTTTS 144
           S T       + SS G Q N +TS
Sbjct: 177 SWTALENPRFSRSSTGFQGNWSTS 200

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g07770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYBF_ARATH3.1e-2056.52Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At... [more]
KAN2_ARATH4.9e-1856.10Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1[more]
KAN1_ARATH1.9e-1764.71Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1[more]
ROLL9_ORYSJ9.3e-1765.57Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV... [more]
KAN3_ARATH3.0e-1560.66Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1[more]
BLAST of Cp4.1LG10g07770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1D1_CUCSA3.2e-4052.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312300 PE=4 SV=1[more]
A0A118K6Z3_CYNCS7.6e-3468.75Homeodomain-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010174 PE=4... [more]
A0A164Z6V7_DAUCA1.0e-3371.30Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018677 PE=4 SV=1[more]
A0A061ERX5_THECC1.7e-3366.37Myb-like HTH transcriptional regulator family protein, putative isoform 1 OS=The... [more]
M5W4P5_PRUPE3.8e-3363.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021179mg PE=4 SV=1[more]
BLAST of Cp4.1LG10g07770 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G38300.14.4e-3357.69 myb-like HTH transcriptional regulator family protein[more]
AT2G40260.17.3e-2860.19 Homeodomain-like superfamily protein[more]
AT2G42660.11.4e-2369.44 Homeodomain-like superfamily protein[more]
AT2G02060.13.5e-2253.47 Homeodomain-like superfamily protein[more]
AT1G14600.11.7e-2156.52 Homeodomain-like superfamily protein[more]
BLAST of Cp4.1LG10g07770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128462|ref|XP_008464219.1|4.4e-4353.81PREDICTED: probable transcription factor KAN4 isoform X2 [Cucumis melo][more]
gi|659128458|ref|XP_008464217.1|3.8e-4253.57PREDICTED: probable transcription factor KAN3 isoform X1 [Cucumis melo][more]
gi|778693848|ref|XP_011653702.1|1.2e-4049.80PREDICTED: probable transcription factor KAN4 [Cucumis sativus][more]
gi|700199239|gb|KGN54397.1|4.6e-4052.44hypothetical protein Csa_4G312300 [Cucumis sativus][more]
gi|694402861|ref|XP_009376409.1|4.5e-3559.03PREDICTED: two-component response regulator ARR18-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g07770.1Cp4.1LG10g07770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..65
score: 8.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 13..67
score: 1.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 9..67
score: 8.3
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..68
score: 6.63
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..69
score: 11
NoneNo IPR availableunknownCoilCoilcoord: 187..210
scor
NoneNo IPR availablePANTHERPTHR31314FAMILY NOT NAMEDcoord: 1..113
score: 6.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g07770Cucsa.130050Cucumber (Gy14) v1cgycpeB0343
Cp4.1LG10g07770CmaCh03G003350Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g07770CmaCh07G010800Cucurbita maxima (Rimu)cmacpeB868
Cp4.1LG10g07770CmoCh07G011300Cucurbita moschata (Rifu)cmocpeB808
Cp4.1LG10g07770CmoCh03G003490Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g07770Cla018083Watermelon (97103) v1cpewmB086
Cp4.1LG10g07770Csa4G312300Cucumber (Chinese Long) v2cpecuB070
Cp4.1LG10g07770MELO3C026010Melon (DHL92) v3.5.1cpemeB070
Cp4.1LG10g07770ClCG04G006830Watermelon (Charleston Gray)cpewcgB078
Cp4.1LG10g07770CSPI04G16060Wild cucumber (PI 183967)cpecpiB065
Cp4.1LG10g07770Lsi01G015660Bottle gourd (USVL1VR-Ls)cpelsiB048
Cp4.1LG10g07770MELO3C026010.2Melon (DHL92) v3.6.1cpemedB089
Cp4.1LG10g07770CsaV3_4G026450Cucumber (Chinese Long) v3cpecucB0075
Cp4.1LG10g07770Bhi03G001711Wax gourdcpewgoB0085
Cp4.1LG10g07770CsGy4G015370Cucumber (Gy14) v2cgybcpeB463
Cp4.1LG10g07770Carg20009Silver-seed gourdcarcpeB0785
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g07770Cp4.1LG19g02660Cucurbita pepo (Zucchini)cpecpeB080
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g07770Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG10g07770Cucurbita pepo (Zucchini)cpecpeB093
Cp4.1LG10g07770Cucurbita pepo (Zucchini)cpecpeB094
Cp4.1LG10g07770Cucurbita pepo (Zucchini)cpecpeB105
Cp4.1LG10g07770Cucumber (Gy14) v1cgycpeB0482
Cp4.1LG10g07770Cucurbita maxima (Rimu)cmacpeB256
Cp4.1LG10g07770Cucurbita maxima (Rimu)cmacpeB701
Cp4.1LG10g07770Cucurbita maxima (Rimu)cmacpeB809
Cp4.1LG10g07770Cucurbita maxima (Rimu)cmacpeB862
Cp4.1LG10g07770Cucurbita moschata (Rifu)cmocpeB220
Cp4.1LG10g07770Cucurbita moschata (Rifu)cmocpeB265
Cp4.1LG10g07770Cucurbita moschata (Rifu)cmocpeB654
Cp4.1LG10g07770Cucurbita moschata (Rifu)cmocpeB763
Cp4.1LG10g07770Cucurbita moschata (Rifu)cmocpeB802
Cp4.1LG10g07770Wild cucumber (PI 183967)cpecpiB063
Cp4.1LG10g07770Wild cucumber (PI 183967)cpecpiB082
Cp4.1LG10g07770Cucumber (Chinese Long) v2cpecuB068
Cp4.1LG10g07770Cucumber (Chinese Long) v2cpecuB086
Cp4.1LG10g07770Bottle gourd (USVL1VR-Ls)cpelsiB061
Cp4.1LG10g07770Bottle gourd (USVL1VR-Ls)cpelsiB064
Cp4.1LG10g07770Watermelon (Charleston Gray)cpewcgB056
Cp4.1LG10g07770Watermelon (Charleston Gray)cpewcgB068
Cp4.1LG10g07770Watermelon (97103) v1cpewmB062
Cp4.1LG10g07770Watermelon (97103) v1cpewmB094
Cp4.1LG10g07770Watermelon (97103) v1cpewmB095
Cp4.1LG10g07770Melon (DHL92) v3.5.1cpemeB053
Cp4.1LG10g07770Cucumber (Gy14) v2cgybcpeB294
Cp4.1LG10g07770Cucumber (Gy14) v2cgybcpeB711
Cp4.1LG10g07770Melon (DHL92) v3.6.1cpemedB066
Cp4.1LG10g07770Melon (DHL92) v3.6.1cpemedB070
Cp4.1LG10g07770Silver-seed gourdcarcpeB0220
Cp4.1LG10g07770Silver-seed gourdcarcpeB0365
Cp4.1LG10g07770Silver-seed gourdcarcpeB0825
Cp4.1LG10g07770Silver-seed gourdcarcpeB1383
Cp4.1LG10g07770Cucumber (Chinese Long) v3cpecucB0073
Cp4.1LG10g07770Cucumber (Chinese Long) v3cpecucB0094
Cp4.1LG10g07770Wax gourdcpewgoB0079
Cp4.1LG10g07770Wax gourdcpewgoB0070
Cp4.1LG10g07770Wax gourdcpewgoB0076