Cp4.1LG10g06660 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g06660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DDB1-and CUL4-associated factor 4
Location	Cp4.1LG10 : 18717 .. 27935 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAAAACAATCCATTCCATTATAAATTATGATTCGTATTTCTAAATCGATCCGATATTTTGCAGGCACGCCCAGCGATAGTCGGGATCGGAACATCTAATTCTCTGCCCTTCTGAACATCCGCTTCGAAAGTCCATCGCTTCAAAACTCTTCCACTGCAACTCCTACTTCGCCACGCTGCTTCCACCACCACTTTCTCAATAGTCATGCCACCAGGTTCCACTTTTGCTTTCCGCTCTCATTCTATTTCCTTCCTTTCAATCTCTCATCAATGTCAAATTTTGCTTTCCATACTTCCGTGCAGAGCTCCCTGGTTATTACTATGATGTCCAGAAGAACAGGTATTTCCCTCTCAAGGGCCCAATTCCTGGTTCTTCTCGCACTTCCTCCTCCTCTTCTTCAGCCCCTCATCACAAACGAGCTTCTAAGCCCACCCCGGTGTGTATTACTCTACCTCTGGATACTACCAATTTCACCTTTTCTGTTTAGGATTTATGCTTTTCAATGCGTATTCTGCTTCCCACAAAATTTCCGTGCTTAGTTGCTTTATTAAACACGGTATCTGACTTCTCTATCACTCGAGGCCCTGAATTTTGCGGTTCCTTAGTAGTCGTGGGGCAGGACTAGGGTTCGTAGTGCTGACTTAAATCTGGGTCGAGTCAGTTTCCTCTTGGAGCGCTTTTAGAAAGAAAAAAAGAAAAAACTGTCAAGCGTTTGGGGGCAGACCTGGGCTTTAAAATAATATTTTCAAAAGCTCATTATTTGGCACTTATTTTTATTTATTATTATTTTTTTTTTTTTGTATTTTCTTCTTATCAATGAAGTTCCATGTTTCCACAAACCAGCCTCCATTTTTTCCTCTCTCCTTTTGGCCCTTTCTTTCTCTCGTCTTCTCAAACAAAACTAATGAATAACAACCTTCAAATCTTGATGAATGAGGGCAAGGTAATAATTGGGGACGACTAAAGCCGTTTTTTCTCAGTGTGAGACCTTTTTGGGAAGGTTTAGATTGGTGTTCCCTTTCAAACTGAAACATGGAGGAGTTGGAAGCTTCTTTCTCGTCTGAAAGAGGTGGTCTTTGGTTTTGAGAGAGAAAAAAATACCTGGTCCAAATGGTTTTACGGGCTTTCTTCTAGGATAATTGGGGTGGTATTACTATTACTATGCTATTGTTTTCACTTCCTTAGGTTGTATACTTCGAGGACTAGTGCATTTTTCTTAGTTGGTAAGCTAATGTTTCATGATAGTCCTCGGTGCTGTCATGTGATAGTTTTGGCCTCACTTTAGAAATTATTTTATCATAATTAGGTACTTGATATCAATACATTAAAAAACAACTTTTCCCCTACAGATGGTCGATTCATGTTCGAAGGCAGATTTAAGAGCCGTGAAGCTGATTCAAGCCAGGGAGTTGTATGGTAATGTTATTGCTTCCAGTAAAGGAAAGTGGAACTTCAAGGAAGAATTCCAAAATTTACTGGCATCCAAACCTGTGGTATGTTCCTTATCAACGATCGTCCTAAACTTGAGAGCACTTGTTCCAATTTCACTTAAATGGAATGTCGAATTAGGCCTTAATATATTAGTTGAATTATTTTATTGATGTTTGTGGTGGAAACCACATAAGAAAGAAGGGTAATCTAAGCGTTATGAGGAAGCTCTTAGCTTTGGACATCATTTTCCTTCTACTTTTTTATGAACTGGTAGGTTTGGGCTATGGTAAATAACTAAATCAGTGTAAGATAGTGATTGTTTTGTTTCCATTGAAGACCCTTCAGAAGATGTAAAACTCCATTTGGTTTTATTCTTTAAATATCTTCTAAGCAATCATCATGTCGTTTTTCATTGTTTTGCCAAACCAATGATATCCTTCAGGAATTTTTAATGTATATTCTACATAGCAGAATATTTTTCTGTTTCTTTATTATAATAAGTTGAACAAGATATTCTATGCAGGTTTGGAAATACCGAGGAACTGATAGAATGGGGGATAGTGCTTTGCAAGAAATACCTATTAATGTGCACACCCTGGAGGGTCAAATGGAATCTACTGTTCTATTGACGGGCAATATAAGTGGCTCCTTGAGGTATTTATGGAGTTGCTCTACTGTGTGAATGCATTTGTGCTTGGACAATGCAAGAGAGTTTAATCTTTAAATCCAGTTTTTTATTAAATGGTAATCAATTCAGATTAGTTTTGTTTGTGTATGTCCGGACCATTTGGTTAGCTTTGTGTAAAGTTATGTGTAAAACAGTGTGAGGCATTTTTTGTTGGGTTGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAATATGGACCAAATAGAAACCTATAAAATCTTAGGGACTAAATTGAATAAAGCCCAAATGATAGGAATGCTTGGTGGGTGTGTTAGTTACATAGGAGAAAGTAAAATAAAAGTGCTAGAATTCAAAAGAATTAAGGAATAGTTTCAATTGTTGCCTTGTTTGAAGAGTTCTTGGTGGAAGTTCTTTTAGTGGGAGTGTTAGAATTTTTGTCCTGGAATTCTAGGGGGTTGTGGAATTATTCCAACAAGAATCGGTTTGAAGAATTTTCTGTTTTACCGTTGTCCTAATGTTGAGAGGATGTGTGCATAATGAGTAAAATTTGGTTGAGATTGCCAATGGTGTTTTGTCTTTTTTGCCATTGGAGTTAAAGGAATAGTTCCAGCTGTTAGCTTGTTTGAAGTGTTCTTGGTGGGAGATCTATTGATGTGGATTCCTTGGAAAGGTTACTCATTATAAGGTCCCTTGCATGAAGAGTTGCTGGTGGTTAAGAAACATTTAATACATCGATGGTGGAAGGTTCTTGAAACTTGATTCATTTAATTTTGATACCTTGGAATAGGCAGTGGTGGACTGGTAGTTAAAGTCTTGTATGGGTGTTTCTTTGGATGTCACATCGTCTTATTGGGTCATTTAAAGCTGGCTTTTTGAATTTTTACAGAATCCAAGTGCCTAGTTATGATTCTTTAGATTCCTCTACTGTATTTAAGGAGCAAGTTGTCATCCTCATCATTCTTATTGATATGGCTAGAAGTTTCTGCATTGACAGCCTGTTTTAATCAAGAGATTTTCAACAAGAATAATAATCCTTGGTCATATCGGTTTGTTTCTACTCGTTTGAAGGCATTGTCTTTGTGTGTTCTATCCAACCTCTTTCTGGACAGTCTATTCATTATTTTTAGTCCCATTTGTCGTGCTTTTTGTTGTACTCTTTATTTTCTTATTACTCACTCCTCGTGGAGTTTGTAACTTTTGAGCATTAATCTCTTTTCATTTCATCCATGTAAAAAATAGTTTCTCGTAAAAAAAGAAAAAAAACCCCTCTTGCATTTAGAATGTTTCATTTTACTTAAATCGATACTTCGGTTGTTTTTTTTTTCCTTCCATGAAGTGTTTAATCCTTAGCCTTTTGCTTCGAGGACCTTTATGTCTTATTGATTAACTATTAGTGCATCACTTGCATTTGTTATATTTCACTTTACTTAAATAAATATTTTTTATTTTTTTCTTTTTCATAAAATTTGATCCTGAATTCATTCCTTTTGATCTTTATGTCTTATTAATTAATTAGTAGTGCATTACGATTCAATGCTTTGAATTTCTAAATCTTGCAGCTTTTTTGGAGTTGGAGAGGGTGATCAGCATATTGAGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATTGGCTGGAGAAAACCAAATGGTTAGAGAAGTTCCTGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCATCGAACATATCTAGTATAAAGTTGTTTAAGAAGCGCTTCCCTTTGGTCCATGATGATGTTTCTGATATCCAACATGCACTGTATCCTTTCATTTTCTAGATTTCTTTTCCACTATTCTTCTTCCCCCGGCCCCATCTGCAGGGGGGTTGGGTTGATAAATGCCTTTATTTTCTCTTTTAGTGCCTTAACTTGAGGAACCAGAATAAGTACATTGGGATCTGACTCATCTGGTGGATCGGTTTATGTTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAAGCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTGAATCCAGTGGAGGTAGAGCTGTGATCGGTATGTGTTTCTTTTGGTCCCTGTATTCTTATTATCATGCTGGATCCGGATCCTTAACAAATGCACCATATTCTAATATTTGAGAGCTTTTGTGCTTGCTCCCCATATATTTTTGGCTATGAGGTTCAACAGATTGATTATATGACATTACTTCCATTGATATTTGTTTGTTCTGTTTGTATATGTTATAATCTTTAAAAAACACTTTCCTACGCTATGGAGATGCATGGTTCTGGTTATTTATTTCTATTTGTGGTGTTTTGCTCCATTTGGTTTGGCCATTTGAACCAAAAATTGGCTTGAATTAGATTCTCTCTCCCCCCCNCCCCAAAAAAAAAGAAAAAAAATCAACAGCAAACCCTGATTTTCTCAGAAGATTAAGGAAAAAAGTTTATGATCTTCCGTCTTCCCAAAATTCAGATGATTGCTCAGGTTGGGAGTCCAAAGTTCATTTCTCAAGCTGTAGAATCTAATAAGTGAAATTCGGCCCTGAAGAAATCCTTTTTATTCATGTTATTTAACATTCATCTGAGATTAAAGAATCTTCGTAGATTGCTCCTTATGGTGTTATTGACACGGATAATGGGTCTAAGATCAGTTTAAGTAGTGTACAACTTGATCTACAACCTTTTGGTAGTTTGGTGGATGATATTGTTGAGGATTCTTACGAAGCAACCTTGGATATGTTGTTTAGGATTTCTTCCAAGGAAGAATCTGTTTCCCATTAAGACTTAGTTTCACCTCATAATATTTTTAGTGCTAGCTCTTCTCCTCTAACCATTTGGCTAGGGTTTATATGATTATATCTATCTCCTCAATTTTATAGGATTATTCTTACTGGTGACTTGCTCAAGTCAAAAGCTAAAATTATTTGGCTCAATGCAGTGAGGTGCATTCTGTGGGAAATGAATGTGGTTGGAGAGATATAGAACTTCCGAAGATGTTGATAAAAACTTTTCCACTCTTTGGGAGAATATTGTTCGTCTCCTCTTCCTTGGTTACTTTTAGGTTCTTGGATTACCCCTGGGGAGTTTAGCAGATTGATCATTTTTTTAACCTTTCTTTAACTCTATTACACGAGCATTTTCTTTAACTGTGACCTCTCCTTGATTCATACATATTCAAGGAACTTTTCTGTAGCTCCTTAGGTTTAGTAGGCTTTTGCTTAGTTTTATCCAATCCATCCTTGTTATTGCTTCTCCAAATGTGTGTATTGAACTGGGTCAGTGTGTGTATGTTAATTCACGTAGAATAAATTAAGAAACATTTTTATCCCTATAGATGGAAGTTGGATATTCTACACGCCTGCATAGAAAAAGAGCTGATTTATGCATTTGTTCTTTGAGGAAAGAAGGCTTTGGTGAGTAAAAACAATCTCCAAGTCATACACAAGCCTGGTTGCAAAATGTTTTAGAAAAGGCAGTGGCTTCGTTTGAAGTAAAGTGAATTTTAGCACGCCCTACCATTGTCATTGATATAAGGCTTTAAAAGAACAATGGAGGATGCGAATAAAACCTTATATTTCATCTCTTCTTGATTTCCAACTAAATTTTCTTTGTCCTAGTGTGTTTGATTTCCAACTAAATTTTCTTTGTCCTAGTGTGTTTTTTAAACTGGAACTAGATCCTATTGCCAATATGGTACTTATCGTTCTCAATTATAATCTTGAATTGCAGTACCATGAACTTGATTATTGATGAGCAGATACGGGAGAGGAATGTGTCACTGGATTCTCTCTCTCTCTCTCTAGCGTTCTAGTCTCTAGCCCATTCTCTGTTAAGTACTTATCATGCAACTCTTTTGGTTTCTGCAGGGACGAACATGGGAGCTGCTTCAGTTGATATGGAAACCAGCAGGATATCATGGATCTTACATGGTAAAAGCGACATTTTTGCGCTACAACTCATTCATTCGGTAATTCACTTTGTATGCCTGTCATTTGCATTTAAAATCCCAATAATTAGTTCTTTTGGGCCTTTGCATTCTATTCCTTTGCTTGTGTGATGTGGAACTGTATCTTATATTAATTTACTGGATAACCTGTTGCAGGAAAATGTTGTTCTGTGTGGACTTAGAAATGGCATGATTGTGACAATTGATACTCGTGAAAGACAGGGAGTATGTAAAAGACTTGTAAGGCATAGAATTCCTTACTTACCCGTAGATAGAGACTCCAGAACGTCTTCTCAGCAATGGTATAAGGTAAATAGCATTTATATGTTTTAGAAATTTGTGTTATATTTTCAAATCTCAATATGCAATGTTTGTTTCCTGGTGAAATAAATAATAAAACTTATGAGGTTTTGTCTTAAGATATTGAAACTTTTAACCACTGTGGATTGGCTCAGTCTTGTAATCCAGATGTCTTTATAATCATCCGTTTAGTTGTGGGATTTAGTTATGGTAACCACCTAAGTAAGATGTCTAATATCTTATGGGCTACCATTGTCATGTTGTACAATTAGATAGTTCGTCCTTAAGATTACTGGAGGTGTACCAAACATTATGCACACCCGGTAAAGGTAGTACATATCGTCTTCTTAATTATACCCAAAGTCTTGGAGGAAGCTTCTCAAAAGTAAAAAACTTAGAATGATGAATGTTGTCTATGTTAACTCCTTTACGACTAAAACCATGGATAAGGTAGGAAAACTTTATTGAACAGGAATTTAGGTAATAGTTTGTGATTGTTGAAAAGTTTTACATGCTGAAAAGCTATTTAATTCCGGTATGTAGTAGCAGTTTCTGTCTAGCGTGAATCTGAGTAGTAAAATTCTCAGTAATTTCAGTGAATTGTTCATGTTAGGTGGCTAACATCCCTCCCCCCTCCGAACCCCCAAAGTGTACATTTCATTTATATCTATCAAATTTGCACACATGATCTCTGCGAACTTCTTGGAGATGTGCTTTTTTGGGTAATAAAACTATATATGACGTTTTGATTACTTTTCCATGCAGCTCACTGGGAACATTTATCCTTCTTGTACGGTTAAAATGCCTTCTTCCATATCGAGGTAGATCTCTATTTAAATTCATTTCCTTTGTACAAATTTAAAATTCTAACAGTTCTCTTTCCCCTTCCCCATTATCCACTAGCTTGGTGTCGCTTCAGTTTGATGACCGATATTTTCTGTCAAGCTCCATGGATGGATCGGTTAGTGTGCACTCTTCTTTAAATTGTATGTTGAAAGGTGGTAAATAAATATATGCCTGTGTAACTAATTACTGTGTCATTGAGTAGTTAGAACATCGATGAAGTTTTTATTTTGATAGAGCTCTTAGCTGAAATATGACAATGGTTATACTTAAGGAAAATTGTAAAATATCAAACAATGGGAGAGATTTGGGTCTCTTCCCTTGATACGAGCCCACTTTCTACCTTCTCCTCCCATGGTTCGCTCTGCATATTATTAGATTTTCCATTGAGAACATGAAAAGAAACCAGTGCTCAAAGAATACTAAATTCTCCGGAGAGTGGAAAGCAAGAAAAACTGAAAATTTCCTGTTTATTAAAAGGAGCCTCTGGGGTTAGCATTTCGTTTTTTAGAAATGGGGTTCAAGTGGATGGAGTGAGGGAGCAAGCCATATCCCTGTCATTTAGGAACTTGTCAACAGTCTTTGTGGTCATGATTTGACGGAAAGAGCTAGTGTTCTCAGCCCCTTCATCCAACCATTTTGTATTATAAAGTTTCTCCTTTGAAAGTTAAGTGGATAGAAGTTGGTCTCCCTTAAAGCCTCTTTGTTCCATGTTTTGATTAGTATCTTCAACCCTCTTAGTTTCTGTTAAAAACTATGGCTCTGCCAGCCTTGAATTGTTTTGGTTGCCTCCAATCATCCACAACAGTACCGAAAGTGTGATGCTGCAGCCACATATTTTCAGTTTCCAATCTTGCAAGTCCTCTTCCCATACTTAACAAATTACTCCTTATGTCTTCTCTTCACGCAAAGTTTCCCTCAGTTGGCATAACCTCCCTACTCACCGGCGTATCTATCCTCCTGGCATTGATAAAATGCATCGGGGGCTTGTTTTTCCTGACACATTTCTGTGTTGTTCTCATTTACTCATTTTAAATTCTTTGCCTGCCGGATTCATGTTTGTACAGGTAAGACTTTATGATCATCGCCTTATCCAGAGAGGTGCTGTACAAACCTATGATGGGCACGCAAATTCACATACTCGTATACAGCTTGGAGTTGATCCCACTGAGACGTTTGTTGCATCTGGTACTATCATTTTAGTGCAGGCTCAATATTTTTATATTCAGAAATCTCGTGGGTACTGGTAAAACTAGAGTTTCCACTAAACATATTCCGGTTTTAGGTGGAGAAGACTGCAACTTCCGTCTATGGAATATCAAGTCTGGTAAACTTATCTTTGAGGATAAGTTTGTTGATGCTGTCCCCTCAACCATATGCTGGCGAAGGGCTGGAAGTAATGCTCGCTCTCTATTGTTTCTTTCGTCTTTATACGCTTCTTCTACTATATTGTTTTCTATTGAACTTCTTCCAGGATTTCCGAGAGAGCAGAATGGATACCTAGGCTGTGGAGATCATAGTTCGGGAGCATGGCTTGGGTCACAAGGAGGACTTCATTATGTGAGCTTTCCAAGGTCATAGGTGAACTTGCACGAGGATTTCTGGCCAGCTTTTCAAAATCATCATAATTTAACCTTCAACCAAGTTTTGCTTTTACTTATATATGCTTCAGTCAGGAATGAAAGTTACTCAGCGGATAGGTCATCAGCAGCTTTTTTATTATTGTTTTTATTTCTTATTGCAAGGCCATCAGCAATTCAGTTGTTTAATTTACCTTTTCTTCCAAGGCATTGTAAATTTTTTTTGGCAGAATCATGTTGGGAGATGCATAGGTTGTAAATCTATACATATAAAATTACATTTTTGCATTGTAATATTCATATAAAATTACTTTTCTAATCTCACTTGTAATTTCTTAATTCATTTAAAAATGTCGCTCTTTCCTTTCTTAAAATTACTATAACCTAATACTTAAC

mRNA sequence

CGAAAAAACAATCCATTCCATTATAAATTATGATTCGTATTTCTAAATCGATCCGATATTTTGCAGGCACGCCCAGCGATAGTCGGGATCGGAACATCTAATTCTCTGCCCTTCTGAACATCCGCTTCGAAAGTCCATCGCTTCAAAACTCTTCCACTGCAACTCCTACTTCGCCACGCTGCTTCCACCACCACTTTCTCAATAGTCATGCCACCAGAGCTCCCTGGTTATTACTATGATGTCCAGAAGAACAGGTATTTCCCTCTCAAGGGCCCAATTCCTGGTTCTTCTCGCACTTCCTCCTCCTCTTCTTCAGCCCCTCATCACAAACGAGCTTCTAAGCCCACCCCGATGGTCGATTCATGTTCGAAGGCAGATTTAAGAGCCGTGAAGCTGATTCAAGCCAGGGAGTTGTATGGTAATGTTATTGCTTCCAGTAAAGGAAAGTGGAACTTCAAGGAAGAATTCCAAAATTTACTGGCATCCAAACCTGTGGTTTGGAAATACCGAGGAACTGATAGAATGGGGGATAGTGCTTTGCAAGAAATACCTATTAATGTGCACACCCTGGAGGGTCAAATGGAATCTACTGTTCTATTGACGGGCAATATAAGTGGCTCCTTGAGCTTTTTTGGAGTTGGAGAGGGTGATCAGCATATTGAGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATTGGCTGGAGAAAACCAAATGGTTAGAGAAGTTCCTGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCATCGAACATATCTAGTATAAAGTTGTTTAAGAAGCGCTTCCCTTTGGTCCATGATGATGTTTCTGATATCCAACATGCACTAATAAGTACATTGGGATCTGACTCATCTGGTGGATCGGTTTATGTTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAAGCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTGAATCCAGTGGAGGTAGAGCTGTGATCGGGACGAACATGGGAGCTGCTTCAGTTGATATGGAAACCAGCAGGATATCATGGATCTTACATGGTAAAAGCGACATTTTTGCGCTACAACTCATTCATTCGGAAAATGTTGTTCTGTGTGGACTTAGAAATGGCATGATTGTGACAATTGATACTCGTGAAAGACAGGGAGTATGTAAAAGACTTGTAAGGCATAGAATTCCTTACTTACCCGTAGATAGAGACTCCAGAACGTCTTCTCAGCAATGGTATAAGCTCACTGGGAACATTTATCCTTCTTGTACGGTTAAAATGCCTTCTTCCATATCGAGCTTGGTGTCGCTTCAGTTTGATGACCGATATTTTCTGTCAAGCTCCATGGATGGATCGGTAAGACTTTATGATCATCGCCTTATCCAGAGAGGTGCTGTACAAACCTATGATGGGCACGCAAATTCACATACTCGTATACAGCTTGGAGTTGATCCCACTGAGACGTTTGTTGCATCTGGTGGAGAAGACTGCAACTTCCGTCTATGGAATATCAAGTCTGGTAAACTTATCTTTGAGGATAAGTTTGTTGATGCTGTCCCCTCAACCATATGCTGGCGAAGGGCTGGAAGATTTCCGAGAGAGCAGAATGGATACCTAGGCTGTGGAGATCATAGTTCGGGAGCATGGCTTGGGTCACAAGGAGGACTTCATTATGTGAGCTTTCCAAGGTCATAGGTGAACTTGCACGAGGATTTCTGGCCAGCTTTTCAAAATCATCATAATTTAACCTTCAACCAAGTTTTGCTTTTACTTATATATGCTTCAGTCAGGAATGAAAGTTACTCAGCGGATAGGTCATCAGCAGCTTTTTTATTATTGTTTTTATTTCTTATTGCAAGGCCATCAGCAATTCAGTTGTTTAATTTACCTTTTCTTCCAAGGCATTGTAAATTTTTTTTGGCAGAATCATGTTGGGAGATGCATAGGTTGTAAATCTATACATATAAAATTACATTTTTGCATTGTAATATTCATATAAAATTACTTTTCTAATCTCACTTGTAATTTCTTAATTCATTTAAAAATGTCGCTCTTTCCTTTCTTAAAATTACTATAACCTAATACTTAAC

Coding sequence (CDS)

ATGCCACCAGAGCTCCCTGGTTATTACTATGATGTCCAGAAGAACAGGTATTTCCCTCTCAAGGGCCCAATTCCTGGTTCTTCTCGCACTTCCTCCTCCTCTTCTTCAGCCCCTCATCACAAACGAGCTTCTAAGCCCACCCCGATGGTCGATTCATGTTCGAAGGCAGATTTAAGAGCCGTGAAGCTGATTCAAGCCAGGGAGTTGTATGGTAATGTTATTGCTTCCAGTAAAGGAAAGTGGAACTTCAAGGAAGAATTCCAAAATTTACTGGCATCCAAACCTGTGGTTTGGAAATACCGAGGAACTGATAGAATGGGGGATAGTGCTTTGCAAGAAATACCTATTAATGTGCACACCCTGGAGGGTCAAATGGAATCTACTGTTCTATTGACGGGCAATATAAGTGGCTCCTTGAGCTTTTTTGGAGTTGGAGAGGGTGATCAGCATATTGAGCGTGGAGTAAACTGTTGTCCAGAACTTGTTTGGCCATTGGCTGGAGAAAACCAAATGGTTAGAGAAGTTCCTGGAGATATTTGGCAACTTTCTGGTGCTTCATTGCAAATGTCATCGAACATATCTAGTATAAAGTTGTTTAAGAAGCGCTTCCCTTTGGTCCATGATGATGTTTCTGATATCCAACATGCACTAATAAGTACATTGGGATCTGACTCATCTGGTGGATCGGTTTATGTTCTTAATCTTGTTGAACCGTTGGATTTTAATCGAAGCATTCCTGTCATTAGACGAAGGATACACGAGGTTGCTTCTTTCAATTGTTCCATCTGGACGGCTGATTGTGAATCCAGTGGAGGTAGAGCTGTGATCGGGACGAACATGGGAGCTGCTTCAGTTGATATGGAAACCAGCAGGATATCATGGATCTTACATGGTAAAAGCGACATTTTTGCGCTACAACTCATTCATTCGGAAAATGTTGTTCTGTGTGGACTTAGAAATGGCATGATTGTGACAATTGATACTCGTGAAAGACAGGGAGTATGTAAAAGACTTGTAAGGCATAGAATTCCTTACTTACCCGTAGATAGAGACTCCAGAACGTCTTCTCAGCAATGGTATAAGCTCACTGGGAACATTTATCCTTCTTGTACGGTTAAAATGCCTTCTTCCATATCGAGCTTGGTGTCGCTTCAGTTTGATGACCGATATTTTCTGTCAAGCTCCATGGATGGATCGGTAAGACTTTATGATCATCGCCTTATCCAGAGAGGTGCTGTACAAACCTATGATGGGCACGCAAATTCACATACTCGTATACAGCTTGGAGTTGATCCCACTGAGACGTTTGTTGCATCTGGTGGAGAAGACTGCAACTTCCGTCTATGGAATATCAAGTCTGGTAAACTTATCTTTGAGGATAAGTTTGTTGATGCTGTCCCCTCAACCATATGCTGGCGAAGGGCTGGAAGATTTCCGAGAGAGCAGAATGGATACCTAGGCTGTGGAGATCATAGTTCGGGAGCATGGCTTGGGTCACAAGGAGGACTTCATTATGTGAGCTTTCCAAGGTCATAG

Protein sequence

MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRAVKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHTLEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIWQLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLDFNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVDRDSRTSSQQWYKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFPREQNGYLGCGDHSSGAWLGSQGGLHYVSFPRS

Homology

[Close]

BLAST of Cp4.1LG10g06660 vs. Swiss-Prot
Match: DC4L2_HUMAN (DDB1- and CUL4-associated factor 4-like protein 2 OS=Homo sapiens GN=DCAF4L2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-07
Identity = 30/94 (31.91%), Postives = 57/94 (60.64%), Query Frame = 1


Query: 364 GNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSH 423
           G+ + +  +   S+++SL  LQ D ++ +SS M G+++L+D R  +   V  Y+GH N+ 
Sbjct: 259 GSGWKAICLSHDSAVTSLQILQ-DGQFLVSSDMTGTIKLWDLRATK--CVTQYEGHVNNS 318

Query: 424 TRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLI 458
             + + V+  E  VA+ G+DC  R+W+++ G L+
Sbjct: 319 AYLPVHVNEEEGVVAAVGQDCYTRIWSLRHGHLL 349

[Close]

BLAST of Cp4.1LG10g06660 vs. TrEMBL
Match: A0A0A0KMD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538710 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 1.6e-260
Identity = 447/512 (87.30%), Postives = 471/512 (91.99%), Query Frame = 1


Query: 2   PPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRAV 61
           PP+LPGYYYD QKNRYFPLKGPIPGSSR SSSSSSAPHHK  S  TP V+S  KADLR V
Sbjct: 4   PPDLPGYYYDAQKNRYFPLKGPIPGSSRASSSSSSAPHHKPPSDSTPTVNSYLKADLRTV 63

Query: 62  KLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHTL 121
           KLIQARELYG+VIASSK K NFKE+FQNLLASKPV WKYRGTD MGDSALQE+PINV TL
Sbjct: 64  KLIQARELYGDVIASSKAKCNFKEKFQNLLASKPVFWKYRGTDTMGDSALQEMPINVDTL 123

Query: 122 EGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIWQ 181
           EGQ ES+VLLTGNISGSLSFFGVG GDQHI   VNCCPELVWP A ENQM  EVPGDIWQ
Sbjct: 124 EGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSARENQMFGEVPGDIWQ 183

Query: 182 LSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLDF 241
           LSGASLQMSSNIS IKLFKKRFP VHD+VSDIQHALISTLGSD SGGSVY+LNLVEPLDF
Sbjct: 184 LSGASLQMSSNISCIKLFKKRFPSVHDEVSDIQHALISTLGSDVSGGSVYILNLVEPLDF 243

Query: 242 NRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKSD 301
           NR+IPVIRRRIHEVASF+CSIWTADC+SSGGRAVIGTN+GAASVDM T RISWILHGKSD
Sbjct: 244 NRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIGTNIGAASVDMGTGRISWILHGKSD 303

Query: 302 IFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVD-RDSRTSSQQWY 361
           IFALQLIHSENVVLCGLRNGMIVTIDTRERQ V KRL+RHRIPYLP+D R+SRTSSQQWY
Sbjct: 304 IFALQLIHSENVVLCGLRNGMIVTIDTRERQEVGKRLLRHRIPYLPIDRRNSRTSSQQWY 363

Query: 362 KLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHA 421
           KLTGNI+PSCTVKMPSSISSL+SLQFDDRYFL+SSMDGSV+LYDHRLIQRGAVQTYDGH 
Sbjct: 364 KLTGNIFPSCTVKMPSSISSLMSLQFDDRYFLASSMDGSVKLYDHRLIQRGAVQTYDGHE 423

Query: 422 NSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFP 481
           NSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA GRFP
Sbjct: 424 NSHTRVQLGVDPTETFVTSGGEDCKFRLWNIKSGKLIFEDKFGDAVPSTICWRRAGGRFP 483

Query: 482 REQNGYLGCGDHSSGAWLGSQGGLHYVSFPRS 512
           R  +GYLGC DHSSGAWLGSQ G+HYVS+PR+
Sbjct: 484 RGLDGYLGCEDHSSGAWLGSQAGIHYVSWPRT 515

[Close]

BLAST of Cp4.1LG10g06660 vs. TrEMBL
Match: D7TA65_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00400 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 8.3e-156
Identity = 285/513 (55.56%), Postives = 368/513 (71.73%), Query Frame = 1


Query: 2   PPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRAV 61
           P ELPG+YYDV+KNRYFP+K PIPGSS     SSS   +K  S P    + C +  +RA 
Sbjct: 3   PRELPGFYYDVEKNRYFPIKAPIPGSS-----SSSTRLNKPPSLPKSGNNICKRIGIRAA 62

Query: 62  KLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHTL 121
           KL+Q+REL+G+VI S KGK NF++E+  +LAS+P+VWKY+ TDR+GD AL++I  +++T 
Sbjct: 63  KLLQSRELHGDVIPSKKGKCNFEKEYLKVLASQPLVWKYQETDRIGDGALEQISTDINTS 122

Query: 122 EGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWP-LAGENQMVREVPGDIW 181
           +GQ    +LLTG ++G LS + V +  QH + GV C P+ VWP + G+     +  G IW
Sbjct: 123 DGQSPKDLLLTGGVNGYLSLYEVAKVGQHFDYGVKCMPDRVWPPVIGKQTECSKAVGHIW 182

Query: 182 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 241
           + +GASL M S+IS IK+  K  P   DD S IQH LI+TLGS++ GGSVY+LNL  PLD
Sbjct: 183 RPTGASLVMQSSISCIKMVGKHSPCTIDDQSAIQHVLITTLGSETIGGSVYILNLTRPLD 242

Query: 242 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKS 301
           FN SIP+IR+R+HEVASFNC+IWTADC S G +AVIGTN+G A V+MET   SW+   KS
Sbjct: 243 FN-SIPIIRQRMHEVASFNCTIWTADCNSKGSQAVIGTNVGVALVNMETRVPSWVCRTKS 302

Query: 302 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQ-GVCKRLVRHRIPYLPVDRDSRTSSQ-- 361
           D+ +LQL  S NVVLCGLRNG +VT+D RE+Q G   R  RHR+PY P  R S  SS+  
Sbjct: 303 DVLSLQLDQSGNVVLCGLRNGAVVTVDVREKQEGAYARHTRHRVPY-PSHRISEASSRTV 362

Query: 362 -----QWYKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGA 421
                QW++L G IYP  T+ +PSSIS L+SLQ  D+YFL+SSMDGS++LYDHRLIQRGA
Sbjct: 363 QKFSKQWFELKGKIYPESTIFLPSSISCLLSLQLYDQYFLASSMDGSMKLYDHRLIQRGA 422

Query: 422 VQTYDGHANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICW 481
           VQ+Y+GH NSHTRIQLGVDP+E FV SGGED NFR+W+I SG+L+FEDKF ++VP T+CW
Sbjct: 423 VQSYEGHVNSHTRIQLGVDPSERFVFSGGEDHNFRIWSITSGELLFEDKFSNSVPLTLCW 482

Query: 482 RRAGRF--PREQNGYLGCGDHSSGAWLGSQGGL 504
            +  R      Q+G +    H   AW+GS+ G+
Sbjct: 483 EQTQRVLDGTHQHGQM----HGWSAWIGSEEGV 504

[Close]

BLAST of Cp4.1LG10g06660 vs. TrEMBL
Match: A0A067L3S5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26654 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 6.8e-150
Identity = 276/512 (53.91%), Postives = 369/512 (72.07%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           MP ELPG+YYD +KNRYFPLKGPIPGSSR SSS+++    K +S+P    +SC +  +R 
Sbjct: 1   MPKELPGFYYDAEKNRYFPLKGPIPGSSRPSSSTNNTA--KTSSQPVQASNSCRRTRVRI 60

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
            KL+Q REL G++I  +KGK +F EE     AS+P+VWKY+GT + GD AL ++ IN+ T
Sbjct: 61  SKLLQGRELNGDIINFNKGKHSFVEELLKAQASQPMVWKYQGTQKQGDGALDQMRINILT 120

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGE-NQMVREVPGDI 180
            EGQ +  VL+TG+ SGSLS F VG+  QH + GV C P+ V P+ GE     R+ P DI
Sbjct: 121 PEGQTQVDVLITGSRSGSLSLFEVGKVGQHFDNGVKCIPDRVRPVVGEIKAECRKPPLDI 180

Query: 181 WQLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPL 240
           W+ SGASLQM S+ISSIK F K+ P   D+   IQHALI+TLGS++SGGSV +LNL+EPL
Sbjct: 181 WRPSGASLQMPSSISSIKPFVKQSPYA-DNSFTIQHALITTLGSETSGGSVCILNLIEPL 240

Query: 241 DFNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGK 300
           D     P +R+ + E+ SFNC+IWTAD   +  + VIGTN+GAA +++ET   +W+   K
Sbjct: 241 DLYSRTP-LRQSMREITSFNCTIWTADFNQNSNQVVIGTNLGAALINLETGTRTWMCRSK 300

Query: 301 SDIFALQLIHSENVVLCGLRNGMIVTIDTRE-RQGVCKRLVRHRIPYLPVDRDSRTSSQQ 360
           SD+ A QL  S NVVLCGLRNG I+T+D RE R+G   RL+RHRIP+  + +  + SS+Q
Sbjct: 301 SDVLAQQLDQSGNVVLCGLRNGAILTVDVRENREGFSARLIRHRIPHSTLGKFHQNSSKQ 360

Query: 361 WYKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDG 420
           W+++ GN+YPSCT  MPSSI SLVSL+  D+YFL+SSMDGS++LYDHR+  +G +Q+Y+G
Sbjct: 361 WFEVRGNVYPSCTFYMPSSICSLVSLRSYDQYFLASSMDGSIKLYDHRM-TKGELQSYEG 420

Query: 421 HANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRF 480
           + NSH+R+QL VD +E F+ +GGEDCN RLW+IKSG+L++E+K  D+V ST CW+R+ R+
Sbjct: 421 NVNSHSRLQLAVDQSERFLMAGGEDCNLRLWSIKSGELLYEEKVSDSVLSTGCWQRSERY 480

Query: 481 PR---EQNGYLGCGDHSS-GAWLGSQGGLHYV 507
            R   E+      G H+S GAW GSQ GL YV
Sbjct: 481 VRLQDERYEEFQSGQHNSWGAWCGSQEGLFYV 507

[Close]

BLAST of Cp4.1LG10g06660 vs. TrEMBL
Match: A0A067GCA7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037288mg PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 2.7e-146
Identity = 271/512 (52.93%), Postives = 352/512 (68.75%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           MP ELPG+YYD +KNRYFP+KGPIPG+SR+SS+++  P  K+ ++ T    + S      
Sbjct: 1   MPQELPGFYYDAEKNRYFPIKGPIPGTSRSSSTAAQKPISKQPTRAT----NSSLTGATT 60

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
            KL+QAREL GNV + SKGK NFKEEFQ  L S+PVVW+Y  T++ GD  L++I +NV T
Sbjct: 61  SKLLQARELRGNVFSLSKGKCNFKEEFQKRLISQPVVWRYEATNQTGDITLEQIELNVQT 120

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVR-EVPGDI 180
            EGQ  + VLLTG+++G  S F VG   QH    V   P  VWP   +N+    + P  I
Sbjct: 121 PEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHI 180

Query: 181 WQLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPL 240
           W+L+ AS+ M S++S IKLF K  P    D   ++HALI++LGS+++GGS+Y LNL  PL
Sbjct: 181 WRLNKASILMPSSVSCIKLFGKH-PSCATDGGSVRHALITSLGSETTGGSIYALNLDNPL 240

Query: 241 DFNRSIPVIRRR-IHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHG 300
           D   +  +IRR  +H VASF C++WTAD  ++  +AVIGTN+GAA VDMET   SW+   
Sbjct: 241 DIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRS 300

Query: 301 KSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLV--RHRIPYLPVDRDSRTSS 360
           KSDI A Q+IHS NVVLCG RNG IVT+D R+RQ  C      RHRIPY  + R+ R ++
Sbjct: 301 KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTN 360

Query: 361 QQWYKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTY 420
           +QW++L  NI+PS T  MPSSIS L SLQ  D+YFL+SSMDG+V+LYDHRL  RGAVQ+Y
Sbjct: 361 EQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSY 420

Query: 421 DGHANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAG 480
           +GH NSHTRIQLGVD +E FV SGGEDC  R+W+I+SG+L+FEDKF ++VPS +CWR   
Sbjct: 421 EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQR 480

Query: 481 RFPREQNGYL----GCGD-HSSGAWLGSQGGL 504
               +  G +      G  HS  AW+G+Q GL
Sbjct: 481 SMGPQIEGKIHEEFDLGQRHSWEAWIGTQEGL 507

[Close]

BLAST of Cp4.1LG10g06660 vs. TrEMBL
Match: A0A061DVK4_THECC (Transducin/WD40 repeat-like superfamily protein, putative OS=Theobroma cacao GN=TCM_005976 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.9e-144
Identity = 271/513 (52.83%), Postives = 351/513 (68.42%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           MP ELPG YYD +KNRYFP+K  IPGSS  +S     P     S        C +     
Sbjct: 1   MPQELPGLYYDAEKNRYFPIKPRIPGSSSHASQFQKNPLSN--SIQVEATKLCPQTKAPT 60

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
            +L+  REL G      +G+ +F+EEF  L ASKPV+W+YRGTD + DSAL++  I+  T
Sbjct: 61  SRLLHLRELNGGAFTFDRGRHSFQEEFHKLQASKPVIWRYRGTDNISDSALEQTQIDTQT 120

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180
           LEGQME+ VLL G+I GSLSF  VG+  QH E G+   P+LV P         E P  +W
Sbjct: 121 LEGQMETDVLLAGSIDGSLSFLNVGKFGQHFEYGLTHIPDLVGPSTKVEAESNETPRYMW 180

Query: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240
           +  GASL+MSS IS +KLF+K     ++D S ++ ALI+TLGS++SGG VY+LNL+EP+D
Sbjct: 181 RPLGASLRMSSRISCMKLFEKCPTFTNNDDSKVRRALITTLGSETSGGYVYILNLLEPVD 240

Query: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKS 300
           F+ ++    +R+H VASFN +IWTAD  S   RAVIGTN+GA+ V++E     W+   KS
Sbjct: 241 FSSTVD---QRLHAVASFNYTIWTADFNSHTSRAVIGTNIGASLVNVERGTSVWVCRTKS 300

Query: 301 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQ-GVCKRLVRHRIPYLPVDRDSRTSSQQW 360
           D+ A Q   + N+VLCGLRNG IVT+D RE Q G+  RL+RHR+PY       R++ +QW
Sbjct: 301 DVLAQQFDQTGNLVLCGLRNGAIVTVDVRENQDGLSARLMRHRVPYFS---SGRSNQKQW 360

Query: 361 YKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGH 420
           ++L G+IYPS T+ MPSSISSLVSLQ  D+YFL+SSMDGS++LYDHRL +RGAVQ+Y GH
Sbjct: 361 FELKGHIYPSHTIYMPSSISSLVSLQSYDQYFLASSMDGSMKLYDHRLTKRGAVQSYGGH 420

Query: 421 ANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA---- 480
            NSHTRIQLGVD +E FV SGG DC  RLW+IKSGKL+FEDKF D+ P+T+CW+RA    
Sbjct: 421 VNSHTRIQLGVDQSERFVVSGGGDCYLRLWSIKSGKLLFEDKFSDSAPTTVCWQRAERCG 480

Query: 481 GRFPREQ--NGYLGCGDHSSGAWLGSQGGLHYV 507
           GR   +Q    +L   +H+ GAWLGS+GGL Y+
Sbjct: 481 GREDEKQRYKEHLFGQNHNFGAWLGSRGGLFYM 505

[Close]

BLAST of Cp4.1LG10g06660 vs. TAIR10
Match: AT5G17370.1 (AT5G17370.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 391.7 bits (1005), Expect = 6.8e-109
Identity = 222/524 (42.37%), Postives = 315/524 (60.11%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           M PELPG+YYD +KNRYFP+KGPIPG+    SSSSS    K   KP    +   +  L+A
Sbjct: 20  MKPELPGFYYDEEKNRYFPIKGPIPGAK---SSSSSRTKQKPEPKPEQETNYQKRTKLKA 79

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
           +KL+ +REL GNVI+ +K   NF++E Q   AS PVVW+Y  T+ +GD+AL++  ++V T
Sbjct: 80  LKLVYSRELNGNVISVNKKMSNFRDEIQKTQASYPVVWRYGSTEDIGDTALKQFQVDVQT 139

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180
             G     +L+ G+  G LS   V +  Q  +  + C P  V P    +   RE P  I 
Sbjct: 140 PVGLTRKNILVAGSAGGCLSILRVSKDRQVYDGVIECDPVSVLPCKENDTEEREAPEHIL 199

Query: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQH----ALISTLGSDSSGGSVYVLNLV 240
           + +   L   S+ISSI+L  +       D S+  H    ALI+TLGS +  GS+++LN+ 
Sbjct: 200 RPTQPCLVALSSISSIELIGR------SDASENSHPVNRALITTLGS-TGRGSIFILNVA 259

Query: 241 EPLDFNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWIL 300
           E ++      +  R +    S  C+IWT+DC  SG  A IGT++GA  VD+ET   S+ L
Sbjct: 260 EEVNI-----LTPRSLQGNVSSECTIWTSDCNISGSHAAIGTDLGAGLVDLETGVGSYFL 319

Query: 301 HGKSDIFALQLIHSENVVLCGLRNGMIVTIDTRERQG-VCKRLVRHRIPYLPVDRDSRTS 360
             KSD+FALQ   S N+V CGLRNG IV++D RER G    RL RH+I Y    +   TS
Sbjct: 320 RSKSDVFALQFHQSGNIVHCGLRNGAIVSVDLRERPGRPFPRLTRHQIRYQSSSKTGLTS 379

Query: 361 S-QQWY-----------------KLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMD 420
           + +QW+                 +L GNI PS  + MPSS++ L +L+  D+Y ++SSMD
Sbjct: 380 TKKQWFEVLLRSSFLTSHNILFLQLQGNINPSHVIYMPSSLTCLKTLKTSDQYLMASSMD 439

Query: 421 GSVRLYDHRLIQRG-AVQTYDGHANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKL 480
           G+++LYD R+++RG  VQTY+GH NSHT I+ G+DP+E F+ SGG+DC  R+W+IKSG+L
Sbjct: 440 GTIKLYDQRMVKRGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIWSIKSGQL 499

Query: 481 IFEDKFVDAVPSTICWRRAGRFPREQNGYLGCGDHSSGAWLGSQ 501
           + E+KF ++VPS +CW  A    R++   +G      GAWLGS+
Sbjct: 500 MSENKFSNSVPSVVCW-SADERQRDRKDSIG-----HGAWLGSR 522

[Close]

BLAST of Cp4.1LG10g06660 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 1


Query: 379 SSLVSLQFDD--RYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSHTRIQLGVDPTETF 438
           S+ VS+ F     +F S S+D +++++D R  ++G + TY GH      ++    P   +
Sbjct: 102 SNCVSVNFHPFGEFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRF--TPDGRW 161

Query: 439 VASGGEDCNFRLWNIKSGKLIFEDK 462
           + SGGED   ++W++ +GKL+ E K
Sbjct: 162 IVSGGEDNVVKVWDLTAGKLLHEFK 182

[Close]

BLAST of Cp4.1LG10g06660 vs. TAIR10
Match: AT5G23430.1 (AT5G23430.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-06
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 1


Query: 379 SSLVSLQFDD--RYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSHTRIQLGVDPTETF 438
           S+ +S+ F     +F S S+D +++++D R  ++G + TY GH      ++    P   +
Sbjct: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRF--TPDGRW 161

Query: 439 VASGGEDCNFRLWNIKSGKLIFEDK 462
           V SGGED   ++W++ +GKL+ E K
Sbjct: 162 VVSGGEDNIVKVWDLTAGKLLTEFK 182

[Close]

BLAST of Cp4.1LG10g06660 vs. TAIR10
Match: AT1G61210.1 (AT1G61210.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-06
Identity = 25/73 (34.25%), Postives = 44/73 (60.27%), Query Frame = 1


Query: 390 YFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSHTRIQLGVDPTETFVASGGEDCNFRLW 449
           +  S S D +++++D R  ++G +QTY GH+   + I+    P   +V SGG D   ++W
Sbjct: 114 FLASGSSDANLKIWDIR--KKGCIQTYKGHSRGISTIRF--TPDGRWVVSGGLDNVVKVW 173

Query: 450 NIKSGKLIFEDKF 463
           ++ +GKL+ E KF
Sbjct: 174 DLTAGKLLHEFKF 182

[Close]

BLAST of Cp4.1LG10g06660 vs. TAIR10
Match: AT1G11160.1 (AT1G11160.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 8.2e-06
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 1


Query: 390 YFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANSHTRIQLGVDPTETFVASGGEDCNFRLW 449
           +  S S D ++R++D R  ++G +QTY GH    + I+    P   +V SGG D   ++W
Sbjct: 114 FLASGSSDTNLRVWDTR--KKGCIQTYKGHTRGISTIEF--SPDGRWVVSGGLDNVVKVW 173

Query: 450 NIKSGKLIFEDK 462
           ++ +GKL+ E K
Sbjct: 174 DLTAGKLLHEFK 181

[Close]

BLAST of Cp4.1LG10g06660 vs. NCBI nr
Match: gi|778721902|ref|XP_004134515.2| (PREDICTED: uncharacterized protein LOC101220880 isoform X2 [Cucumis sativus])

HSP 1 Score: 906.4 bits (2341), Expect = 2.3e-260
Identity = 447/512 (87.30%), Postives = 471/512 (91.99%), Query Frame = 1


Query: 2   PPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRAV 61
           PP+LPGYYYD QKNRYFPLKGPIPGSSR SSSSSSAPHHK  S  TP V+S  KADLR V
Sbjct: 4   PPDLPGYYYDAQKNRYFPLKGPIPGSSRASSSSSSAPHHKPPSDSTPTVNSYLKADLRTV 63

Query: 62  KLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHTL 121
           KLIQARELYG+VIASSK K NFKE+FQNLLASKPV WKYRGTD MGDSALQE+PINV TL
Sbjct: 64  KLIQARELYGDVIASSKAKCNFKEKFQNLLASKPVFWKYRGTDTMGDSALQEMPINVDTL 123

Query: 122 EGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIWQ 181
           EGQ ES+VLLTGNISGSLSFFGVG GDQHI   VNCCPELVWP A ENQM  EVPGDIWQ
Sbjct: 124 EGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSARENQMFGEVPGDIWQ 183

Query: 182 LSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLDF 241
           LSGASLQMSSNIS IKLFKKRFP VHD+VSDIQHALISTLGSD SGGSVY+LNLVEPLDF
Sbjct: 184 LSGASLQMSSNISCIKLFKKRFPSVHDEVSDIQHALISTLGSDVSGGSVYILNLVEPLDF 243

Query: 242 NRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKSD 301
           NR+IPVIRRRIHEVASF+CSIWTADC+SSGGRAVIGTN+GAASVDM T RISWILHGKSD
Sbjct: 244 NRTIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIGTNIGAASVDMGTGRISWILHGKSD 303

Query: 302 IFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVD-RDSRTSSQQWY 361
           IFALQLIHSENVVLCGLRNGMIVTIDTRERQ V KRL+RHRIPYLP+D R+SRTSSQQWY
Sbjct: 304 IFALQLIHSENVVLCGLRNGMIVTIDTRERQEVGKRLLRHRIPYLPIDRRNSRTSSQQWY 363

Query: 362 KLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHA 421
           KLTGNI+PSCTVKMPSSISSL+SLQFDDRYFL+SSMDGSV+LYDHRLIQRGAVQTYDGH 
Sbjct: 364 KLTGNIFPSCTVKMPSSISSLMSLQFDDRYFLASSMDGSVKLYDHRLIQRGAVQTYDGHE 423

Query: 422 NSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFP 481
           NSHTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA GRFP
Sbjct: 424 NSHTRVQLGVDPTETFVTSGGEDCKFRLWNIKSGKLIFEDKFGDAVPSTICWRRAGGRFP 483

Query: 482 REQNGYLGCGDHSSGAWLGSQGGLHYVSFPRS 512
           R  +GYLGC DHSSGAWLGSQ G+HYVS+PR+
Sbjct: 484 RGLDGYLGCEDHSSGAWLGSQAGIHYVSWPRT 515

[Close]

BLAST of Cp4.1LG10g06660 vs. NCBI nr
Match: gi|778721898|ref|XP_011658371.1| (PREDICTED: uncharacterized protein LOC101220880 isoform X1 [Cucumis sativus])

HSP 1 Score: 901.4 bits (2328), Expect = 7.5e-259
Identity = 445/510 (87.25%), Postives = 469/510 (91.96%), Query Frame = 1


Query: 4   ELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRAVKL 63
           +LPGYYYD QKNRYFPLKGPIPGSSR SSSSSSAPHHK  S  TP V+S  KADLR VKL
Sbjct: 12  DLPGYYYDAQKNRYFPLKGPIPGSSRASSSSSSAPHHKPPSDSTPTVNSYLKADLRTVKL 71

Query: 64  IQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHTLEG 123
           IQARELYG+VIASSK K NFKE+FQNLLASKPV WKYRGTD MGDSALQE+PINV TLEG
Sbjct: 72  IQARELYGDVIASSKAKCNFKEKFQNLLASKPVFWKYRGTDTMGDSALQEMPINVDTLEG 131

Query: 124 QMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIWQLS 183
           Q ES+VLLTGNISGSLSFFGVG GDQHI   VNCCPELVWP A ENQM  EVPGDIWQLS
Sbjct: 132 QRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSARENQMFGEVPGDIWQLS 191

Query: 184 GASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLDFNR 243
           GASLQMSSNIS IKLFKKRFP VHD+VSDIQHALISTLGSD SGGSVY+LNLVEPLDFNR
Sbjct: 192 GASLQMSSNISCIKLFKKRFPSVHDEVSDIQHALISTLGSDVSGGSVYILNLVEPLDFNR 251

Query: 244 SIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKSDIF 303
           +IPVIRRRIHEVASF+CSIWTADC+SSGGRAVIGTN+GAASVDM T RISWILHGKSDIF
Sbjct: 252 TIPVIRRRIHEVASFDCSIWTADCQSSGGRAVIGTNIGAASVDMGTGRISWILHGKSDIF 311

Query: 304 ALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVD-RDSRTSSQQWYKL 363
           ALQLIHSENVVLCGLRNGMIVTIDTRERQ V KRL+RHRIPYLP+D R+SRTSSQQWYKL
Sbjct: 312 ALQLIHSENVVLCGLRNGMIVTIDTRERQEVGKRLLRHRIPYLPIDRRNSRTSSQQWYKL 371

Query: 364 TGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGHANS 423
           TGNI+PSCTVKMPSSISSL+SLQFDDRYFL+SSMDGSV+LYDHRLIQRGAVQTYDGH NS
Sbjct: 372 TGNIFPSCTVKMPSSISSLMSLQFDDRYFLASSMDGSVKLYDHRLIQRGAVQTYDGHENS 431

Query: 424 HTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRA-GRFPRE 483
           HTR+QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRA GRFPR 
Sbjct: 432 HTRVQLGVDPTETFVTSGGEDCKFRLWNIKSGKLIFEDKFGDAVPSTICWRRAGGRFPRG 491

Query: 484 QNGYLGCGDHSSGAWLGSQGGLHYVSFPRS 512
            +GYLGC DHSSGAWLGSQ G+HYVS+PR+
Sbjct: 492 LDGYLGCEDHSSGAWLGSQAGIHYVSWPRT 521

[Close]

BLAST of Cp4.1LG10g06660 vs. NCBI nr
Match: gi|659077853|ref|XP_008439422.1| (PREDICTED: uncharacterized protein LOC103484236 isoform X1 [Cucumis melo])

HSP 1 Score: 899.4 bits (2323), Expect = 2.8e-258
Identity = 441/512 (86.13%), Postives = 466/512 (91.02%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           +P +LPGYYYD QKNRYFPLKGPIPGSS  SSSSSSAPHHK  S  TP V+S  KADLR 
Sbjct: 3   LPADLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRT 62

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
           VKLIQARELYG+VIASSK + NFKE+FQN LASKPV WK+RGTD MGDSALQE+PINV T
Sbjct: 63  VKLIQARELYGDVIASSKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDT 122

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180
           LEGQ ES+VLLTGNISGSLSFFGVG GDQHI   VNCCPELVWP AGENQM  EVPGDIW
Sbjct: 123 LEGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIW 182

Query: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240
           QLSGASLQMSSNIS IKLFKK  PL HDDVSDIQHALISTLGSD SGGSVY+LNL+EPLD
Sbjct: 183 QLSGASLQMSSNISCIKLFKKCSPLAHDDVSDIQHALISTLGSDISGGSVYILNLIEPLD 242

Query: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKS 300
           FNR+IPVIRRRIHEVASFNCSIWTADC+SSGGRAVIGTNMGAASVDM T RISWILHGKS
Sbjct: 243 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIGTNMGAASVDMGTGRISWILHGKS 302

Query: 301 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVD-RDSRTSSQQW 360
           DIFALQLIHSENVVLCGLRNGMIVTIDTRERQ V KRL+RHRIPYLP+D R+SRTSSQQW
Sbjct: 303 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQEVAKRLLRHRIPYLPIDRRNSRTSSQQW 362

Query: 361 YKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGH 420
           YKLTGNI+PSCTVKMPSSISSLVSLQFDDRYFL+SSMDGSV+LYDHRLIQRGAVQTYDGH
Sbjct: 363 YKLTGNIFPSCTVKMPSSISSLVSLQFDDRYFLASSMDGSVKLYDHRLIQRGAVQTYDGH 422

Query: 421 ANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFP 480
           ANSHT +QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAGRFP
Sbjct: 423 ANSHTHVQLGVDPTETFVTSGGEDCKFRLWNIKSGKLIFEDKFGDAVPSTICWRRAGRFP 482

Query: 481 REQNGYLGCGDHSSGAWLGSQGGLHYVSFPRS 512
             QNGYLGC  + SGAWLGSQ G+HYV++PR+
Sbjct: 483 GGQNGYLGCEANCSGAWLGSQCGIHYVNWPRT 514

[Close]

BLAST of Cp4.1LG10g06660 vs. NCBI nr
Match: gi|659077857|ref|XP_008439424.1| (PREDICTED: uncharacterized protein LOC103484236 isoform X2 [Cucumis melo])

HSP 1 Score: 889.8 bits (2298), Expect = 2.2e-255
Identity = 439/512 (85.74%), Postives = 464/512 (90.62%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           +P +LPGYYYD QKNRYFPLKGPIPGSS  SSSSSSAPHHK  S  TP V+S  KADLR 
Sbjct: 3   LPADLPGYYYDAQKNRYFPLKGPIPGSSHASSSSSSAPHHKPVSDSTPTVNSYLKADLRT 62

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
           VKLIQARELYG+VIASSK + NFKE+FQN LASKPV WK+RGTD MGDSALQE+PINV T
Sbjct: 63  VKLIQARELYGDVIASSKARCNFKEKFQNFLASKPVFWKFRGTDTMGDSALQEMPINVDT 122

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQMVREVPGDIW 180
           LEGQ ES+VLLTGNISGSLSFFGVG GDQHI   VNCCPELVWP AGENQM  EVPGDIW
Sbjct: 123 LEGQRESSVLLTGNISGSLSFFGVGGGDQHIGHPVNCCPELVWPSAGENQMFGEVPGDIW 182

Query: 181 QLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPLD 240
           QLSGASLQMSSNIS IKLFKK  PL HDDVSDIQHALISTLGSD SGGSVY+LNL+EPLD
Sbjct: 183 QLSGASLQMSSNISCIKLFKKCSPLAHDDVSDIQHALISTLGSDISGGSVYILNLIEPLD 242

Query: 241 FNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGKS 300
           FNR+IPVIRRRIHEVASFNCSIWTADC+SSGGRAVIGTNMGAASVDM T RISWILHGKS
Sbjct: 243 FNRTIPVIRRRIHEVASFNCSIWTADCQSSGGRAVIGTNMGAASVDMGTGRISWILHGKS 302

Query: 301 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQGVCKRLVRHRIPYLPVDR-DSRTSSQQW 360
           DIFALQLIHSENVVLCGLRNGMIVTIDTRERQ V KRL+RHRIPYLP+DR +SRTSSQQW
Sbjct: 303 DIFALQLIHSENVVLCGLRNGMIVTIDTRERQEVAKRLLRHRIPYLPIDRRNSRTSSQQW 362

Query: 361 YKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDGH 420
           YKLTGNI+PSCTVKMPSSISSLVSLQFDDRYFL+SSMDGSV+LYDHRLIQRGAVQTYDGH
Sbjct: 363 YKLTGNIFPSCTVKMPSSISSLVSLQFDDRYFLASSMDGSVKLYDHRLIQRGAVQTYDGH 422

Query: 421 ANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRFP 480
           ANSHT +QLGVDPTETFV SGGEDC FRLWNIKSGKLIFEDKF DAVPSTICWRRAGR  
Sbjct: 423 ANSHTHVQLGVDPTETFVTSGGEDCKFRLWNIKSGKLIFEDKFGDAVPSTICWRRAGR-- 482

Query: 481 REQNGYLGCGDHSSGAWLGSQGGLHYVSFPRS 512
             QNGYLGC  + SGAWLGSQ G+HYV++PR+
Sbjct: 483 -GQNGYLGCEANCSGAWLGSQCGIHYVNWPRT 511

[Close]

BLAST of Cp4.1LG10g06660 vs. NCBI nr
Match: gi|470118837|ref|XP_004295528.1| (PREDICTED: DDB1- and CUL4-associated factor 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 569.7 bits (1467), Expect = 5.1e-159
Identity = 283/513 (55.17%), Postives = 370/513 (72.12%), Query Frame = 1


Query: 1   MPPELPGYYYDVQKNRYFPLKGPIPGSSRTSSSSSSAPHHKRASKPTPMVDSCSKADLRA 60
           MP +LPG+YYD ++NRYFP KGP+PGS R +S+++S+   ++ ++   +V  C +  ++ 
Sbjct: 1   MPQDLPGFYYDAERNRYFPNKGPVPGSRRANSAAASSSGSQKLNQ---IVKKCKRTKVKT 60

Query: 61  VKLIQARELYGNVIASSKGKWNFKEEFQNLLASKPVVWKYRGTDRMGDSALQEIPINVHT 120
            KL+QARELYGNVIAS KG+ NF EE+Q   AS PVVWKY+GT+++GD AL+ I I+V T
Sbjct: 61  TKLLQARELYGNVIASGKGRCNFMEEYQKAQASHPVVWKYQGTNKLGDGALERINIDVQT 120

Query: 121 LEGQMESTVLLTGNISGSLSFFGVGEGDQHIERGVNCCPELVWPLAGENQM-VREVPGDI 180
            EG  +   LL G   GSLSFF  G+ +  I  G  C P+LVWPL  ++Q+  R+ PG I
Sbjct: 121 GEGLTDRNFLLAGGRDGSLSFFEFGKFEGDIHFGRKCLPDLVWPLLNKSQVECRKAPGHI 180

Query: 181 WQLSGASLQMSSNISSIKLFKKRFPLVHDDVSDIQHALISTLGSDSSGGSVYVLNLVEPL 240
           W+ +  +  MSS IS IK F +      ++ S IQ+AL+ TLG++  GGSV+V+NL E L
Sbjct: 181 WRPAQNTQWMSSGISCIKTFGRHG--TENEGSSIQNALVCTLGAEDRGGSVFVINLTELL 240

Query: 241 DFNRSIPVIRRRIHEVASFNCSIWTADCESSGGRAVIGTNMGAASVDMETSRISWILHGK 300
           +F  + P++RR I EVA+FNC+IWTADC S G  AVIGTN+GAA VD+ET   SW+L GK
Sbjct: 241 EFRPNRPILRRNIDEVATFNCTIWTADCRSDGRHAVIGTNLGAALVDLETGVKSWLLRGK 300

Query: 301 SDIFALQLIHSENVVLCGLRNGMIVTIDTRE-RQGVCKRLVRHRIPYLPVDRDSRTSSQQ 360
           SD+ A QLIHS NVVLCGLRNG IVT+D RE R+G   R   HRI +  +D     S++Q
Sbjct: 301 SDVLAQQLIHSGNVVLCGLRNGAIVTVDVREKREGFSARHASHRIQHSTLDSTLGKSTKQ 360

Query: 361 WYKLTGNIYPSCTVKMPSSISSLVSLQFDDRYFLSSSMDGSVRLYDHRLIQRGAVQTYDG 420
           W+KL+GNI+PS T+KMPSSI+ LVSLQFDD+YFL+SSMDG+V+LYDHR+IQRGAVQTY+G
Sbjct: 361 WFKLSGNIHPSHTIKMPSSIACLVSLQFDDQYFLASSMDGTVKLYDHRIIQRGAVQTYEG 420

Query: 421 HANSHTRIQLGVDPTETFVASGGEDCNFRLWNIKSGKLIFEDKFVDAVPSTICWRRAGRF 480
           H NSHTR+QLGVDP+E F  SGGEDCN RLW+IKSG+L+FEDK  + V ST+CW++A  F
Sbjct: 421 HVNSHTRLQLGVDPSERFFVSGGEDCNLRLWSIKSGELLFEDKLTNTVTSTVCWQKAESF 480

Query: 481 ---PREQNGYLGCGDHSSGAWLGSQGGLHYVSF 509
                E+  Y      S GAWLGS  G+ Y+ +
Sbjct: 481 NGVQDERRSYDNVKHDSLGAWLGSAEGIFYMDW 508

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g06660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DC4L2_HUMAN	1.4e-07	31.91	DDB1- and CUL4-associated factor 4-like protein 2 OS=Homo sapiens GN=DCAF4L2 PE=...	[more]

BLAST of Cp4.1LG10g06660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMD9_CUCSA	1.6e-260	87.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538710 PE=4 SV=1	[more]
D7TA65_VITVI	8.3e-156	55.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00400 PE=4 SV=...	[more]
A0A067L3S5_JATCU	6.8e-150	53.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26654 PE=4 SV=1	[more]
A0A067GCA7_CITSI	2.7e-146	52.93	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037288mg PE=4 SV=1	[more]
A0A061DVK4_THECC	1.9e-144	52.83	Transducin/WD40 repeat-like superfamily protein, putative OS=Theobroma cacao GN=...	[more]

BLAST of Cp4.1LG10g06660 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17370.1	6.8e-109	42.37	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08390.1	2.8e-06	31.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.1	3.7e-06	31.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.1	3.7e-06	34.25	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	8.2e-06	34.72	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Cp4.1LG10g06660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778721902\|ref\|XP_004134515.2\|	2.3e-260	87.30	PREDICTED: uncharacterized protein LOC101220880 isoform X2 [Cucumis sativus]	[more]
gi\|778721898\|ref\|XP_011658371.1\|	7.5e-259	87.25	PREDICTED: uncharacterized protein LOC101220880 isoform X1 [Cucumis sativus]	[more]
gi\|659077853\|ref\|XP_008439422.1\|	2.8e-258	86.13	PREDICTED: uncharacterized protein LOC103484236 isoform X1 [Cucumis melo]	[more]
gi\|659077857\|ref\|XP_008439424.1\|	2.2e-255	85.74	PREDICTED: uncharacterized protein LOC103484236 isoform X2 [Cucumis melo]	[more]
gi\|470118837\|ref\|XP_004295528.1\|	5.1e-159	55.17	PREDICTED: DDB1- and CUL4-associated factor 4 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g06660.1	Cp4.1LG10g06660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 413..450 score: 3.
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 365..404 score: 0.76coord: 409..450 score: 0.88coord: 289..327 score: 1
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 416..459 score: 9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 225..477 score: 5.7
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 374..459 score: 11
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 373..478 score: 5.13E-20coord: 225..337 score: 5.13
None	No IPR available	PANTHER	PTHR19845	KATANIN P80 SUBUNIT	coord: 268..506 score: 1.0E
None	No IPR available	PANTHER	PTHR19845:SF6	TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN	coord: 268..506 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g06660	Cucsa.048990	Cucumber (Gy14) v1	cgycpeB0034
Cp4.1LG10g06660	Cla009904	Watermelon (97103) v1	cpewmB074
Cp4.1LG10g06660	Csa6G538710	Cucumber (Chinese Long) v2	cpecuB087
Cp4.1LG10g06660	MELO3C007000	Melon (DHL92) v3.5.1	cpemeB061
Cp4.1LG10g06660	ClCG01G025890	Watermelon (Charleston Gray)	cpewcgB062
Cp4.1LG10g06660	CSPI06G37640	Wild cucumber (PI 183967)	cpecpiB083
Cp4.1LG10g06660	Lsi01G000090	Bottle gourd (USVL1VR-Ls)	cpelsiB049
Cp4.1LG10g06660	MELO3C007000.2	Melon (DHL92) v3.6.1	cpemedB081
Cp4.1LG10g06660	CsaV3_6G053120	Cucumber (Chinese Long) v3	cpecucB0096
Cp4.1LG10g06660	BhiUN587G14	Wax gourd	cpewgoB0072
Cp4.1LG10g06660	CsGy6G037010	Cucumber (Gy14) v2	cgybcpeB713
Cp4.1LG10g06660	Carg24628	Silver-seed gourd	carcpeB1491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g06660	Cucurbita pepo (Zucchini)	cpecpeB083
Cp4.1LG10g06660	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g06660	Cucurbita maxima (Rimu)	cmacpeB861
Cp4.1LG10g06660	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g06660	Cucurbita moschata (Rifu)	cmocpeB801
Cp4.1LG10g06660	Silver-seed gourd	carcpeB1028