Cp4.1LG10g05050 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATGACAACCACCACTACGATCTGCCTCCACTCTCCTCCGCCACTCTCTCCGCCGCCACCATTCTCCTCTCTCATCCTCCTCCTCCTCCTCCTCCACAAGACTCCCATCTCCCACCTATTCTCTCCCAACACTGCTTAGGCTTCTCCTCCCCCGCCCCAAAATCCTATTTTTTCACAAACCCTCCTCCTCCTCCTCCACCTCCTCCGCCTCCTCACGACCAACTCCCATCCCATTTCCCGCCTTCCTCCGCCTTCCTCTCCTACAGCTTCAACGATCTCACAACTTCTTTATTTCAAAAAGACGAAGGCAGAAGGGTTCTTGATGCTTGGAGTACCAAAGTGGCTAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTAAGTCGAACCTCTTCTTCTTCCTCCTCCACCTCCGCCGCCTCCTCTTCCGGTTTTGGCTATAATAACGATGAGTATTCAAAGGGATTAATGGCTACCCACTTCCTAAACACCGATACACATAACAACGCCAATCCAAATAATTTTACCCTCTGCACGCCAGATAACAAGGTGGGTGTCATCAAGTTTTGA ATGGACGATGACAACCACCACTACGATCTGCCTCCACTCTCCTCCGCCACTCTCTCCGCCGCCACCATTCTCCTCTCTCATCCTCCTCCTCCTCCTCCTCCACAAGACTCCCATCTCCCACCTATTCTCTCCCAACACTGCTTAGGCTTCTCCTCCCCCGCCCCAAAATCCTATTTTTTCACAAACCCTCCTCCTCCTCCTCCACCTCCTCCGCCTCCTCACGACCAACTCCCATCCCATTTCCCGCCTTCCTCCGCCTTCCTCTCCTACAGCTTCAACGATCTCACAACTTCTTTATTTCAAAAAGACGAAGGCAGAAGGGTTCTTGATGCTTGGAGTACCAAAGTGGCTAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTAAGTCGAACCTCTTCTTCTTCCTCCTCCACCTCCGCCGCCTCCTCTTCCGGTTTTGGCTATAATAACGATGAGTATTCAAAGGGATTAATGGCTACCCACTTCCTAAACACCGATACACATAACAACGCCAATCCAAATAATTTTACCCTCTGCACGCCAGATAACAAGGTGGGTGTCATCAAGTTTTGA ATGGACGATGACAACCACCACTACGATCTGCCTCCACTCTCCTCCGCCACTCTCTCCGCCGCCACCATTCTCCTCTCTCATCCTCCTCCTCCTCCTCCTCCACAAGACTCCCATCTCCCACCTATTCTCTCCCAACACTGCTTAGGCTTCTCCTCCCCCGCCCCAAAATCCTATTTTTTCACAAACCCTCCTCCTCCTCCTCCACCTCCTCCGCCTCCTCACGACCAACTCCCATCCCATTTCCCGCCTTCCTCCGCCTTCCTCTCCTACAGCTTCAACGATCTCACAACTTCTTTATTTCAAAAAGACGAAGGCAGAAGGGTTCTTGATGCTTGGAGTACCAAAGTGGCTAGAAGTAAGAGAAGACTCGCCCGCCAAAGAACCCTTACTTTAAGTCGAACCTCTTCTTCTTCCTCCTCCACCTCCGCCGCCTCCTCTTCCGGTTTTGGCTATAATAACGATGAGTATTCAAAGGGATTAATGGCTACCCACTTCCTAAACACCGATACACATAACAACGCCAATCCAAATAATTTTACCCTCTGCACGCCAGATAACAAGGTGGGTGTCATCAAGTTTTGA MDDDNHHYDLPPLSSATLSAATILLSHPPPPPPPQDSHLPPILSQHCLGFSSPAPKSYFFTNPPPPPPPPPPPHDQLPSHFPPSSAFLSYSFNDLTTSLFQKDEGRRVLDAWSTKVARSKRRLARQRTLTLSRTSSSSSSTSAASSSGFGYNNDEYSKGLMATHFLNTDTHNNANPNNFTLCTPDNKVGVIKF
BLAST of Cp4.1LG10g05050 vs. TrEMBL
Match: A0A0A0KND0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517930 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.0e-26 Identity = 90/186 (48.39%), Postives = 116/186 (62.37%), Query Frame = 1
BLAST of Cp4.1LG10g05050 vs. NCBI nr
Match: gi|659080978|ref|XP_008441082.1| (PREDICTED: putative B3 domain-containing protein Os04g0676650 [Cucumis melo]) HSP 1 Score: 152.5 bits (384), Expect = 7.4e-34 Identity = 100/188 (53.19%), Postives = 124/188 (65.96%), Query Frame = 1
BLAST of Cp4.1LG10g05050 vs. NCBI nr
Match: gi|700194032|gb|KGN49236.1| (hypothetical protein Csa_6G517930 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26 Identity = 90/186 (48.39%), Postives = 116/186 (62.37%), Query Frame = 1
BLAST of Cp4.1LG10g05050 vs. NCBI nr
Match: gi|778722568|ref|XP_011658520.1| (PREDICTED: B3 domain-containing transcription factor LEC2 [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26 Identity = 90/186 (48.39%), Postives = 116/186 (62.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |