Cp4.1LG10g04020 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g04020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCASP-like protein
LocationCp4.1LG10 : 1740986 .. 1741928 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGGAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTCCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCCATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGCCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTGGGTGCTTTTCATTTTTTAAACAAAATACTCTTCTTATTGCGATTGAATCACTTAAACAAATAATTGAAATTTTGAATTGAAATTTGCAGGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTTCTATCCCTTCCATTCTCAATTGTTTGCATTATTCGTCCCCACGCTGCTGGGCCTCGCCTTCTCCTCTTGATTTTGGACTCAGTAAGTATCACATAAAACTCCCGCTAGGAACCACGACTCTCAACAATAGTACGATATTGTCTACTTTGATGCTTTTGACTTCCTCAAAAAGCCTTATACGATCCTCGAAAATAACTGCGACAATAGCATAATATTGTCCATTTTAAGCATAAGCTCTGAATTAGCGGAATGTAGGACTGCTTTGAAGAAACGTACATGTTGTGGTTTGCAGGTGGCTTTGGCGTTGAGCACAGCAGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACGAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTTTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGA

mRNA sequence

ATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGGAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTCCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCCATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGCCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTGGCTTTGGCGTTGAGCACAGCAGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACGAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTTTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGA

Coding sequence (CDS)

ATGAAGAACGCCGAATCCTCTGCCATCAATGTTGCCTCCGAGACCACCAACAGCGGCCCAATTGGGAAGAAGAAGAGCACGACGCCGTTGCTAGCGGCGGAGGTCCCAATCCGGCCAGACAGGGGAACCCACCGGATGAAACGTGGGCTTGCCATTTTCGACATCGTTCTGAGAATCGGCGCCCTTTCCTCGGCGCTGGCGGCGGCAGCCACCATGGGAACCAGTGGCCAAACGTTGCCGTTTTTCACTCAGTTCTTCCAGTTCGAGGCTAGCTACGATGATTTGCCCACTTTCCAGTTTTTTGTGATCGTAATGGGAATCGTTGCGGGATATGTGGTGGCTTTGGCGTTGAGCACAGCAGCAGCAGGAGCGGCAGCGGCAGTGGTGGCGCTTGCACACAGTGGGAACTCAAGCACGAACTGGCTGGCAGTGTGCAACCAATTTGGGGACTTTTGCCAACAAGCGAGTGGGGCTGTGGTGGGCTCTTTTGCTGCTGTTTTGCTCTTCCTTCTACTCATCTTGTTCTCTGCCTTGTCCCTCAAGAATGCCCATTGA

Protein sequence

MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNAH
BLAST of Cp4.1LG10g04020 vs. Swiss-Prot
Match: CASP1_CUCME (Casparian strip membrane protein 1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-73
Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA VP   DRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV-------- 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYV        
Sbjct: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 --------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                               VAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

BLAST of Cp4.1LG10g04020 vs. Swiss-Prot
Match: CASP2_POPTR (Casparian strip membrane protein 2 OS=Populus trichocarpa GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 103/185 (55.68%), Postives = 129/185 (69.73%), Query Frame = 1

Query: 25  KSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQ 84
           K T PL+AA  P++   G    K+G+AIFD +LR+ A+++ALAAAA+MGTS +TLPFFTQ
Sbjct: 18  KGTAPLIAA--PMKEKGG---YKKGIAIFDFILRLAAIATALAAAASMGTSDETLPFFTQ 77

Query: 85  FFQFEASYDDLPTFQFFVIVMGIVAGYV----------------------------VALA 144
           FFQF+ASYDDLPTFQFFVI M IVAGY+                            VAL 
Sbjct: 78  FFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLLLIILDTVALT 137

Query: 145 LSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFS 182
           L+TAA  AAAA+V LAH+GNSSTNWLA+C QFGDFCQ+ SGAVV SF  V++F+ L++ S
Sbjct: 138 LNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVIFVFLLVLS 197

BLAST of Cp4.1LG10g04020 vs. Swiss-Prot
Match: CASP1_RICCO (Casparian strip membrane protein 1 OS=Ricinus communis GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.1e-42
Identity = 107/204 (52.45%), Postives = 134/204 (65.69%), Query Frame = 1

Query: 6   SSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSA 65
           S+ I + +E   S  + K K+  PL+ A       +G +  K+G+AIFD +LR+GA+ SA
Sbjct: 2   STTIEIPAE---SSAVAKGKA--PLIGASSSSYEKKGGY--KKGIAIFDFILRLGAVISA 61

Query: 66  LAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV------------- 125
           L+AAATMGTS +TLPFFTQFFQFEA YDD PTFQFFVI MG V GY+             
Sbjct: 62  LSAAATMGTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIR 121

Query: 126 ---------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASG 182
                          VAL L+TAAA AAAA+V LAH+GN S NWLAVC QFGDFCQ+ SG
Sbjct: 122 PHAVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSG 181

BLAST of Cp4.1LG10g04020 vs. Swiss-Prot
Match: CASP3_POPTR (Casparian strip membrane protein 3 OS=Populus trichocarpa GN=POPTRDRAFT_907513 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 106/204 (51.96%), Postives = 135/204 (66.18%), Query Frame = 1

Query: 6   SSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSA 65
           S+ +++ ++T+ +      K T PL+AA   ++        K+GLAIFD+VLR+GA+ +A
Sbjct: 2   SARVDIPADTSAAA-----KGTAPLIAASTHVKGG-----YKKGLAIFDLVLRLGAVVTA 61

Query: 66  LAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV------------- 125
           LAAAATMGT+ QTLPFFTQFFQF+ASYDDLPTFQFFVI M IV+GY+             
Sbjct: 62  LAAAATMGTTDQTLPFFTQFFQFQASYDDLPTFQFFVIAMAIVSGYLVLSLPFSIVAIIR 121

Query: 126 ---------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASG 182
                          VAL L+TAAA AA A+V LA +GNSS NWL +C QFGDFCQ+ASG
Sbjct: 122 PHATGPRLLLIILDTVALTLNTAAAAAAVAIVDLAQNGNSSANWLGICQQFGDFCQKASG 181

BLAST of Cp4.1LG10g04020 vs. Swiss-Prot
Match: CASP1_THECC (Casparian strip membrane protein 1 OS=Theobroma cacao PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 104/209 (49.76%), Postives = 132/209 (63.16%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK+ + +AI+V      S  + K K+  PL+A      P       K+GL IFD +LR+G
Sbjct: 1   MKSGDHAAIDVPE----SSAVAKGKA--PLIAT-----PREQKSGFKKGLGIFDFLLRLG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY--------- 120
           A+ +ALAAAATMGTS +TLPFFTQFFQFEASYDDLPTF FFVI M ++ GY         
Sbjct: 61  AIIAALAAAATMGTSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSI 120

Query: 121 -------------------VVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                              +VAL L+TAA  AAAA+V LAH+GN +TNWLA+C QFGDFC
Sbjct: 121 VTIVRPHAVAPRLLLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 182
           Q+ SGAVV SF  V++ + L+L S ++LK
Sbjct: 181 QEVSGAVVASFVTVVVLMSLVLLSGVALK 198

BLAST of Cp4.1LG10g04020 vs. TrEMBL
Match: A0A0A0KKJ8_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_6G453800 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.0e-71
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES++I++A ET NSGPIGKKKSTTPLLAA VP+  DRGTHRMKRGL+IFD VLRIG
Sbjct: 1   MKTGESTSIDIAPETNNSGPIGKKKSTTPLLAAPVPVT-DRGTHRMKRGLSIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV-------- 120
            L+SALAAAATMGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYV        
Sbjct: 61  VLASALAAAATMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 --------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                               VAL L+TAAAGAAAAVV+LAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 211

BLAST of Cp4.1LG10g04020 vs. TrEMBL
Match: M5VSP6_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024449mg PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.8e-43
Identity = 111/209 (53.11%), Postives = 138/209 (66.03%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK+ +S+ I+V     + G   K K         VP R ++G   M+RG+AI D+VLRIG
Sbjct: 1   MKSGDSTTIDVPHHEASGGAASKGKGAI----LTVPARQEKGG--MRRGMAIIDLVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY--------- 120
           A+ +ALAAAATMGTS Q LPFFTQFFQFEASYDD+P+FQFF+I M +VAGY         
Sbjct: 61  AIVAALAAAATMGTSDQNLPFFTQFFQFEASYDDMPSFQFFLIAMSLVAGYLVLSVPFSI 120

Query: 121 -------------------VVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                              VVAL L+T+AAGAA A+V LAH+GNSS+NWLA+CNQFGDFC
Sbjct: 121 VSIVRPHASGIRLLLLILDVVALTLATSAAGAATAIVYLAHNGNSSSNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 182
           Q  SGAVV SF  V+ F+ LIL SA++L+
Sbjct: 181 QTVSGAVVASFVTVVTFMFLILLSAVALR 203

BLAST of Cp4.1LG10g04020 vs. TrEMBL
Match: A0A0A0LBG8_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G777660 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.4e-42
Identity = 110/213 (51.64%), Postives = 138/213 (64.79%), Query Frame = 1

Query: 1   MKNA-ESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRI 60
           MKN+ +S+ I+V     +S    KKK+     A      P + +  +KRGL+IFD VLR+
Sbjct: 1   MKNSGDSTVIDVPPTAASS----KKKAVVSTAA------PGQASGGVKRGLSIFDFVLRL 60

Query: 61  GALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV------- 120
           GAL +AL AAA MGTS +TLPFFTQFFQFEASYDDLPTFQFF+I MGIVAGY+       
Sbjct: 61  GALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFS 120

Query: 121 ---------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDF 180
                                V L L+T+AA AAAA+V LAH GN+STNWLA+C+QF DF
Sbjct: 121 IVCIVRPRAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDF 180

Query: 181 CQQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           CQ+ SGAV+G+F A LL + L+L SA  ++N H
Sbjct: 181 CQKVSGAVIGAFIAALLMMFLVLLSAFGIRNTH 203

BLAST of Cp4.1LG10g04020 vs. TrEMBL
Match: V4KRJ7_EUTSA (CASP-like protein OS=Eutrema salsugineum GN=EUTSA_v10015967mg PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.8e-40
Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 1

Query: 4   AESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALS 63
           ++S A++V +E++++      K   PLL          G+   KRGL+IFD +LR+ A+ 
Sbjct: 3   SDSIAVDVPAESSSA-----IKGKAPLLGLA-----HTGSGGYKRGLSIFDFLLRLAAIV 62

Query: 64  SALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY-----------V 123
           +ALAAAATMGTS +TLPFFTQF QF+ASYDDLPTFQFFVI + +VAGY           +
Sbjct: 63  AALAAAATMGTSDETLPFFTQFLQFQASYDDLPTFQFFVIAIAMVAGYLVLSLPISVVTI 122

Query: 124 VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLL 183
           VAL LSTAAA AAAA+V LAH+GN +TNWLA+C QFGDFCQ+ SG+VV +FA+V    +L
Sbjct: 123 VALVLSTAAASAAAAIVYLAHNGNQNTNWLAICQQFGDFCQKTSGSVVSAFASVTFIAIL 182

BLAST of Cp4.1LG10g04020 vs. TrEMBL
Match: A0A061EU57_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_022705 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38
Identity = 104/209 (49.76%), Postives = 132/209 (63.16%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK+ + +AI+V      S  + K K+  PL+A      P       K+GL IFD +LR+G
Sbjct: 1   MKSGDHAAIDVPE----SSAVAKGKA--PLIAT-----PREQKSGFKKGLGIFDFLLRLG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY--------- 120
           A+ +ALAAAATMGTS +TLPFFTQFFQFEASYDDLPTF FFVI M ++ GY         
Sbjct: 61  AIIAALAAAATMGTSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSI 120

Query: 121 -------------------VVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                              +VAL L+TAA  AAAA+V LAH+GN +TNWLA+C QFGDFC
Sbjct: 121 VTIVRPHAVAPRLLLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 182
           Q+ SGAVV SF  V++ + L+L S ++LK
Sbjct: 181 QEVSGAVVASFVTVVVLMSLVLLSGVALK 198

BLAST of Cp4.1LG10g04020 vs. TAIR10
Match: AT5G06200.1 (AT5G06200.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-41
Identity = 104/206 (50.49%), Postives = 134/206 (65.05%), Query Frame = 1

Query: 4   AESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALS 63
           ++S A++V +E+++       K   PLL      R   G+   KRGL+IFD +LR+ A+ 
Sbjct: 3   SDSIAVDVPAESSSV-----IKGKAPLLGLA---RDHTGSGGYKRGLSIFDFLLRLAAIV 62

Query: 64  SALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVV---------- 123
           +ALAAAATMGTS +TLPFFTQF QFEASYDDLPTFQFFV+ + IVAGY+V          
Sbjct: 63  AALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTI 122

Query: 124 ------------------ALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQA 182
                             ALAL TAAA AAAA+V LAH+GN++TNWL +C QFGDFCQ+ 
Sbjct: 123 VRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKT 182

BLAST of Cp4.1LG10g04020 vs. TAIR10
Match: AT3G11550.1 (AT3G11550.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-40
Identity = 103/209 (49.28%), Postives = 134/209 (64.11%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKN ES+ I+V +E++++      K   PL+          G+    RGLAIFD +LR+ 
Sbjct: 1   MKN-ESTFIDVPAESSSA-----MKGKAPLIGVARD-HTTSGSGGYNRGLAIFDFLLRLA 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYVV------- 120
           A+ +ALAAAATMGTS +TLPFFTQF QFEASYDDLPTFQFFVI M +V GY+V       
Sbjct: 61  AIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISV 120

Query: 121 ---------------------ALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                                 LAL+TAAA +AAA+  LAHSGN +TNWL +C QFGDFC
Sbjct: 121 VTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 182
           Q++SGAVV +F +V+ F +L++ S ++LK
Sbjct: 181 QKSSGAVVSAFVSVVFFTILVVISGVALK 202

BLAST of Cp4.1LG10g04020 vs. TAIR10
Match: AT2G36100.1 (AT2G36100.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 1

Query: 47  KRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMG 106
           KRGLAIFD +LR+ A++  + AA+ M T+ +TLPFFTQF QF+A YDDLP FQ+FVI + 
Sbjct: 42  KRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVA 101

Query: 107 IVAGYVV----------------------------ALALSTAAAGAAAAVVALAHSGNSS 166
           +VA Y+V                             + L+T+AA AAA++  LAH+GN S
Sbjct: 102 VVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQS 161

Query: 167 TNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLK 182
           TNWL +C QFGDFCQ  S AVV    A+L F++LI+ SA++LK
Sbjct: 162 TNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALK 204

BLAST of Cp4.1LG10g04020 vs. TAIR10
Match: AT2G27370.1 (AT2G27370.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 104.8 bits (260), Expect = 5.9e-23
Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = 1

Query: 47  KRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQFEAS--------------- 106
           KRG+AIFD VLR+ A  +A+AAAA M T+ +TLPFFTQF QF+A                
Sbjct: 56  KRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNS 115

Query: 107 ----YDDLPTFQFFVIVMG---------IVAGYVVALALSTAAAGAAAAVVALAHSGNSS 166
               Y  L      V ++          ++    V + L+  AA A+AA+V LAH+GNSS
Sbjct: 116 IVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSS 175

Query: 167 TNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLK 182
           +NWL VC QFGDFCQ  SGAVV SF A  L + L++ SA +LK
Sbjct: 176 SNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALK 218

BLAST of Cp4.1LG10g04020 vs. TAIR10
Match: AT5G15290.1 (AT5G15290.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 1

Query: 46  MKRGLAIFDIVLRIGALSSALAAAATMGTSGQTLPFFTQFFQF----------------- 105
           M R +AI + +LRI A  + + +A  MGT+ +TLPFFTQF +F                 
Sbjct: 21  MSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVAN 80

Query: 106 --EASYDDLPTFQFFVIVMG---------IVAGYVVALALSTAAAGAAAAVVALAHSGNS 165
              + Y  L     FV ++          ++   V  L L T+ A +AAA+V LAH+GN+
Sbjct: 81  AVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNN 140

Query: 166 STNWLAVCNQFGDFCQQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
            TNW A+C QF  FC++ SG+++GSF A++L +LLIL SA++L   H
Sbjct: 141 KTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

BLAST of Cp4.1LG10g04020 vs. NCBI nr
Match: gi|449451163|ref|XP_004143331.1| (PREDICTED: casparian strip membrane protein 1 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 159/212 (75.00%), Postives = 171/212 (80.66%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES++I++A ET NSGPIGKKKSTTPLLAA VP+  DRGTHRMKRGL+IFD VLRIG
Sbjct: 1   MKTGESTSIDIAPETNNSGPIGKKKSTTPLLAAPVPVT-DRGTHRMKRGLSIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV-------- 120
            L+SALAAAATMGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYV        
Sbjct: 61  VLASALAAAATMGTSDQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 --------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                               VAL L+TAAAGAAAAVV+LAHSGNSSTNWLAVCNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAVCNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 211

BLAST of Cp4.1LG10g04020 vs. NCBI nr
Match: gi|659125264|ref|XP_008462597.1| (PREDICTED: casparian strip membrane protein 1 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 5.5e-71
Identity = 159/212 (75.00%), Postives = 169/212 (79.72%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK  ES+AI++A ET NSGPIGKKKSTTPLLAA VP   DRGTHRMKRGLAIFD VLRIG
Sbjct: 1   MKTGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVP---DRGTHRMKRGLAIFDFVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV-------- 120
            L+SALAAAA MGTS QTLPFFTQFFQFEASYDDLPTFQFFV+ M +VAGYV        
Sbjct: 61  VLASALAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSI 120

Query: 121 --------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                               VAL L+TAAAGAAAAVV+LAHSGNSSTNWLA+CNQFGDFC
Sbjct: 121 VCIIRPHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           QQASGAVVGSFAAVLLFLLLILFSALSLKN+H
Sbjct: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNSH 209

BLAST of Cp4.1LG10g04020 vs. NCBI nr
Match: gi|595810960|ref|XP_007203160.1| (hypothetical protein PRUPE_ppa024449mg [Prunus persica])

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-43
Identity = 111/209 (53.11%), Postives = 138/209 (66.03%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MK+ +S+ I+V     + G   K K         VP R ++G   M+RG+AI D+VLRIG
Sbjct: 1   MKSGDSTTIDVPHHEASGGAASKGKGAI----LTVPARQEKGG--MRRGMAIIDLVLRIG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY--------- 120
           A+ +ALAAAATMGTS Q LPFFTQFFQFEASYDD+P+FQFF+I M +VAGY         
Sbjct: 61  AIVAALAAAATMGTSDQNLPFFTQFFQFEASYDDMPSFQFFLIAMSLVAGYLVLSVPFSI 120

Query: 121 -------------------VVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                              VVAL L+T+AAGAA A+V LAH+GNSS+NWLA+CNQFGDFC
Sbjct: 121 VSIVRPHASGIRLLLLILDVVALTLATSAAGAATAIVYLAHNGNSSSNWLAICNQFGDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLK 182
           Q  SGAVV SF  V+ F+ LIL SA++L+
Sbjct: 181 QTVSGAVVASFVTVVTFMFLILLSAVALR 203

BLAST of Cp4.1LG10g04020 vs. NCBI nr
Match: gi|659084408|ref|XP_008442871.1| (PREDICTED: casparian strip membrane protein POPTRDRAFT_576556-like [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-42
Identity = 110/212 (51.89%), Postives = 134/212 (63.21%), Query Frame = 1

Query: 1   MKNAESSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIG 60
           MKN+  S +     T  S    KKK+     A      P + +  +KRGL+IFD V+R+G
Sbjct: 1   MKNSGDSTVIDVPPTAGSS--SKKKAVVSTAA------PQQASGGVKRGLSIFDFVIRLG 60

Query: 61  ALSSALAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGYV-------- 120
           AL +AL AAA MGTS +TLPFFTQFFQFEASYDDLPTFQFF+I MGIVAGY+        
Sbjct: 61  ALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSI 120

Query: 121 --------------------VALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFC 180
                               V L L+T+AA AAAA+V LAH GNSSTNWLA+C+QF DFC
Sbjct: 121 VCIVRPGAVGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFC 180

Query: 181 QQASGAVVGSFAAVLLFLLLILFSALSLKNAH 185
           Q  SGAV+G+F A LL + LIL SA +++N H
Sbjct: 181 QNISGAVIGAFIAALLMMFLILLSAFAIRNTH 204

BLAST of Cp4.1LG10g04020 vs. NCBI nr
Match: gi|645277200|ref|XP_008243654.1| (PREDICTED: casparian strip membrane protein POPTRDRAFT_763057-like [Prunus mume])

HSP 1 Score: 179.5 bits (454), Expect = 5.4e-42
Identity = 111/204 (54.41%), Postives = 135/204 (66.18%), Query Frame = 1

Query: 6   SSAINVASETTNSGPIGKKKSTTPLLAAEVPIRPDRGTHRMKRGLAIFDIVLRIGALSSA 65
           SSAI+V     + G   K K         VP R ++G   M+RG+AI D+VLRIGA+ +A
Sbjct: 12  SSAIDVPHHEASGGGASKGKGAI----LTVPARQEKGG--MRRGMAIIDLVLRIGAVVAA 71

Query: 66  LAAAATMGTSGQTLPFFTQFFQFEASYDDLPTFQFFVIVMGIVAGY-------------- 125
           LAAAATMGTS Q LPFFTQFFQFEASYDD+P+FQFF+I M +VAGY              
Sbjct: 72  LAAAATMGTSDQNLPFFTQFFQFEASYDDMPSFQFFLIAMSLVAGYLVLSVPFSIVSIVR 131

Query: 126 --------------VVALALSTAAAGAAAAVVALAHSGNSSTNWLAVCNQFGDFCQQASG 182
                         VVAL L+T+AAGAA A+V LAH+GNSS+NWLA+CNQFGDFCQ  SG
Sbjct: 132 PHASGIRLLLLILDVVALTLATSAAGAATAIVYLAHNGNSSSNWLAICNQFGDFCQTVSG 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CASP1_CUCME3.5e-7375.00Casparian strip membrane protein 1 OS=Cucumis melo PE=2 SV=1[more]
CASP2_POPTR1.4e-4255.68Casparian strip membrane protein 2 OS=Populus trichocarpa GN=POPTRDRAFT_576556 P... [more]
CASP1_RICCO4.1e-4252.45Casparian strip membrane protein 1 OS=Ricinus communis GN=RCOM_1259250 PE=2 SV=1[more]
CASP3_POPTR1.6e-4151.96Casparian strip membrane protein 3 OS=Populus trichocarpa GN=POPTRDRAFT_907513 P... [more]
CASP1_THECC1.7e-4049.76Casparian strip membrane protein 1 OS=Theobroma cacao PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KKJ8_CUCSA1.0e-7175.00CASP-like protein OS=Cucumis sativus GN=Csa_6G453800 PE=3 SV=1[more]
M5VSP6_PRUPE5.8e-4353.11CASP-like protein OS=Prunus persica GN=PRUPE_ppa024449mg PE=3 SV=1[more]
A0A0A0LBG8_CUCSA6.4e-4251.64CASP-like protein OS=Cucumis sativus GN=Csa_3G777660 PE=3 SV=1[more]
V4KRJ7_EUTSA7.8e-4053.40CASP-like protein OS=Eutrema salsugineum GN=EUTSA_v10015967mg PE=3 SV=1[more]
A0A061EU57_THECC1.9e-3849.76CASP-like protein OS=Theobroma cacao GN=TCM_022705 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G06200.12.2e-4150.49 Uncharacterised protein family (UPF0497)[more]
AT3G11550.12.4e-4049.28 Uncharacterised protein family (UPF0497)[more]
AT2G36100.11.4e-3247.85 Uncharacterised protein family (UPF0497)[more]
AT2G27370.15.9e-2344.79 Uncharacterised protein family (UPF0497)[more]
AT5G15290.11.1e-1937.72 Uncharacterised protein family (UPF0497)[more]
Match NameE-valueIdentityDescription
gi|449451163|ref|XP_004143331.1|1.5e-7175.00PREDICTED: casparian strip membrane protein 1 [Cucumis sativus][more]
gi|659125264|ref|XP_008462597.1|5.5e-7175.00PREDICTED: casparian strip membrane protein 1 [Cucumis melo][more]
gi|595810960|ref|XP_007203160.1|8.3e-4353.11hypothetical protein PRUPE_ppa024449mg [Prunus persica][more]
gi|659084408|ref|XP_008442871.1|4.1e-4251.89PREDICTED: casparian strip membrane protein POPTRDRAFT_576556-like [Cucumis melo... [more]
gi|645277200|ref|XP_008243654.1|5.4e-4254.41PREDICTED: casparian strip membrane protein POPTRDRAFT_763057-like [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
IPR006459CASP/CASPL
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0071555 cell wall organization
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0003954 NADH dehydrogenase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g04020.1Cp4.1LG10g04020.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMsTIGR01569TIGR01569coord: 113..179
score: 1.5E-17coord: 55..113
score: 9.3
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 48..116
score: 3.7
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 37..184
score: 2.3
NoneNo IPR availablePANTHERPTHR11615:SF116CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATEDcoord: 37..184
score: 2.3

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g04020Cucsa.083570Cucumber (Gy14) v1cgycpeB0145
Cp4.1LG10g04020Cucsa.241390Cucumber (Gy14) v1cgycpeB0638
Cp4.1LG10g04020CmaCh06G004930Cucurbita maxima (Rimu)cmacpeB807
Cp4.1LG10g04020CmaCh07G008400Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g04020CmaCh03G011410Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g04020CmoCh03G011310Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g04020CmoCh07G008710Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g04020CmoCh06G004950Cucurbita moschata (Rifu)cmocpeB761
Cp4.1LG10g04020Cla017669Watermelon (97103) v1cpewmB064
Cp4.1LG10g04020Cla018414Watermelon (97103) v1cpewmB078
Cp4.1LG10g04020Csa3G777660Cucumber (Chinese Long) v2cpecuB063
Cp4.1LG10g04020Csa6G453800Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g04020MELO3C009495Melon (DHL92) v3.5.1cpemeB054
Cp4.1LG10g04020MELO3C024564Melon (DHL92) v3.5.1cpemeB069
Cp4.1LG10g04020ClCG10G018710Watermelon (Charleston Gray)cpewcgB057
Cp4.1LG10g04020ClCG04G010220Watermelon (Charleston Gray)cpewcgB071
Cp4.1LG10g04020CSPI06G25650Wild cucumber (PI 183967)cpecpiB081
Cp4.1LG10g04020CSPI03G35160Wild cucumber (PI 183967)cpecpiB059
Cp4.1LG10g04020Lsi01G012060Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g04020Lsi03G018700Bottle gourd (USVL1VR-Ls)cpelsiB062
Cp4.1LG10g04020MELO3C024564.2Melon (DHL92) v3.6.1cpemedB090
Cp4.1LG10g04020MELO3C009495.2Melon (DHL92) v3.6.1cpemedB071
Cp4.1LG10g04020CsaV3_3G037520Cucumber (Chinese Long) v3cpecucB0069
Cp4.1LG10g04020CsaV3_6G040860Cucumber (Chinese Long) v3cpecucB0093
Cp4.1LG10g04020Bhi11G001948Wax gourdcpewgoB0066
Cp4.1LG10g04020CsGy6G025200Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g04020CsGy3G032660Cucumber (Gy14) v2cgybcpeB290
Cp4.1LG10g04020Carg25886Silver-seed gourdcarcpeB0866
Cp4.1LG10g04020Carg05351Silver-seed gourdcarcpeB1128
Cp4.1LG10g04020Carg10495Silver-seed gourdcarcpeB0337
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g04020Cp4.1LG19g05200Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g04020Cp4.1LG08g10130Cucurbita pepo (Zucchini)cpecpeB106
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g04020Cucurbita pepo (Zucchini)cpecpeB092
Cp4.1LG10g04020Cucurbita maxima (Rimu)cmacpeB254
Cp4.1LG10g04020Cucurbita moschata (Rifu)cmocpeB218
Cp4.1LG10g04020Bottle gourd (USVL1VR-Ls)cpelsiB047
Cp4.1LG10g04020Watermelon (Charleston Gray)cpewcgB067
Cp4.1LG10g04020Watermelon (97103) v1cpewmB092
Cp4.1LG10g04020Silver-seed gourdcarcpeB0348
Cp4.1LG10g04020Wax gourdcpewgoB0101