Cp4.1LG10g03900 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g03900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionpentatricopeptide (PPR) repeat-containing protein
LocationCp4.1LG10 : 1670317 .. 1671483 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGAACTCTTGCGGCCACGGATCGTTTCGCTGAGCTCAAGTCGCTTCTTCAGTTCTTAGCTTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAAACGGAATCCATTTTTCAATTTGCCATTACTGCCTATTGTAGAGCTGCGAAATTTGATGAGGCTGTTTTTGCTTTTGATTCCATGAAAAAATTGATTGATGGGAAGCCTAGTGTTGTGATCTATAATATTTTGATTAATGGGTTTGTGAAATCTGGTAGATTTAACAAGGCTTTGGGGTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATTTGTACACTTTTAACATTTTGATTAGTGGGTATTGTCGCAATTCACAATTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTTGCCCAAATGTGGTGAGTTTCAATACTCTGATTAAAGGGTTCTTCAGGGAGAGAAAGTTTGATGATGGGATTGCCATGGCTTATGAAATGATTGAACTGGGATGCAAATTCTCAAGTGTTACTTGTGAAATTGTAATGGATGGGCTGTGTAGAGAAGGCAGGGTTCATGAAGCATGTGAAATTTTGATCGATTTTTCGAGGAAGCGAGTTTTGCCGAAGGATTATGATTACTTTGGAGTTATTGAGAAGCTTTGTGGGAAAGGGAATGCAGGGAAAGCCATGGAAGTTGTGGAGGAGCTTTGGAGGGAAGGAAATGTTCCCAGCTTCATTGCTTCCACCACTTTGATTGATGGACTGAGGAAAGAAGGAAGAGTGAATGATGCAATGAATTTAACAGAGAGGGTCCTTAAAGAAGCAATGGTTCCTGATAGTGTGACTTTGAACTCTCTTCTCCAAGAGCTTTGCAATGCGAGGAGAACAGTGGAAGCTAATAGGTTGAGGTTATTGGCTTCAAGCAAGGGATTTGAACCAGACAGCAAAACGTACTACATTTTGATTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGGTTGTGGATGAGATGTTGGATAAGGAGCTTATACCTGATATTGCTACGTATAATAGATTAATGGATCGGTTGTCGAATGCGTATGAGAAAAGATCTTTACTGTCACGATATCCATCAAGTTCTAAGCTCGTAACGTCAACGTAA

mRNA sequence

ATGGCCAGAACTCTTGCGGCCACGGATCGTTTCGCTGAGCTCAAGTCGCTTCTTCAGTTCTTAGCTTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAAACGGAATCCATTTTTCAATTTGCCATTACTGCCTATTGTAGAGCTGCGAAATTTGATGAGGCTGTTTTTGCTTTTGATTCCATGAAAAAATTGATTGATGGGAAGCCTAGTGTTGTGATCTATAATATTTTGATTAATGGGTTTGTGAAATCTGGTAGATTTAACAAGGCTTTGGGGTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATTTGTACACTTTTAACATTTTGATTAGTGGGTATTGTCGCAATTCACAATTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTTGCCCAAATGTGGTGAGTTTCAATACTCTGATTAAAGGGTTCTTCAGGGAGAGAAAGTTTGATGATGGGATTGCCATGGCTTATGAAATGATTGAACTGGGATGCAAATTCTCAAGTGTTACTTGTGAAATTGTAATGGATGGGCTGTGTAGAGAAGGCAGGGTTCATGAAGCATGTGAAATTTTGATCGATTTTTCGAGGAAGCGAGTTTTGCCGAAGGATTATGATTACTTTGGAGTTATTGAGAAGCTTTGTGGGAAAGGGAATGCAGGGAAAGCCATGGAAGTTGTGGAGGAGCTTTGGAGGGAAGGAAATGTTCCCAGCTTCATTGCTTCCACCACTTTGATTGATGGACTGAGGAAAGAAGGAAGAGTGAATGATGCAATGAATTTAACAGAGAGGGTCCTTAAAGAAGCAATGGTTCCTGATAGTGTGACTTTGAACTCTCTTCTCCAAGAGCTTTGCAATGCGAGGAGAACAGTGGAAGCTAATAGGTTGAGGTTATTGGCTTCAAGCAAGGGATTTGAACCAGACAGCAAAACGTACTACATTTTGATTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGGTTGTGGATGAGATGTTGGATAAGGAGCTTATACCTGATATTGCTACGTATAATAGATTAATGGATCGGTTGTCGAATGCGTATGAGAAAAGATCTTTACTGTCACGATATCCATCAAGTTCTAAGCTCGTAACGTCAACGTAA

Coding sequence (CDS)

ATGGCCAGAACTCTTGCGGCCACGGATCGTTTCGCTGAGCTCAAGTCGCTTCTTCAGTTCTTAGCTTCCTCTCCTTGCCCCTGCTCTGATGGTATTTTCTCTTGCCCTCAAACGGAATCCATTTTTCAATTTGCCATTACTGCCTATTGTAGAGCTGCGAAATTTGATGAGGCTGTTTTTGCTTTTGATTCCATGAAAAAATTGATTGATGGGAAGCCTAGTGTTGTGATCTATAATATTTTGATTAATGGGTTTGTGAAATCTGGTAGATTTAACAAGGCTTTGGGGTTTTATGATAGGATGCTTAGTGATCGGGTTAAGCCTGATTTGTACACTTTTAACATTTTGATTAGTGGGTATTGTCGCAATTCACAATTTGCACTGGCTTTAGAGTTATTTAAGGAGATGAGGGAAAAGGGTTGTTGCCCAAATGTGGTGAGTTTCAATACTCTGATTAAAGGGTTCTTCAGGGAGAGAAAGTTTGATGATGGGATTGCCATGGCTTATGAAATGATTGAACTGGGATGCAAATTCTCAAGTGTTACTTGTGAAATTGTAATGGATGGGCTGTGTAGAGAAGGCAGGGTTCATGAAGCATGTGAAATTTTGATCGATTTTTCGAGGAAGCGAGTTTTGCCGAAGGATTATGATTACTTTGGAGTTATTGAGAAGCTTTGTGGGAAAGGGAATGCAGGGAAAGCCATGGAAGTTGTGGAGGAGCTTTGGAGGGAAGGAAATGTTCCCAGCTTCATTGCTTCCACCACTTTGATTGATGGACTGAGGAAAGAAGGAAGAGTGAATGATGCAATGAATTTAACAGAGAGGGTCCTTAAAGAAGCAATGGTTCCTGATAGTGTGACTTTGAACTCTCTTCTCCAAGAGCTTTGCAATGCGAGGAGAACAGTGGAAGCTAATAGGTTGAGGTTATTGGCTTCAAGCAAGGGATTTGAACCAGACAGCAAAACGTACTACATTTTGATTTCTGGTTACACCATGGAAGGCAACAAGGTGGAAGGGCAAAGGGTTGTGGATGAGATGTTGGATAAGGAGCTTATACCTGATATTGCTACGTATAATAGATTAATGGATCGGTTGTCGAATGCGTATGAGAAAAGATCTTTACTGTCACGATATCCATCAAGTTCTAAGCTCGTAACGTCAACGTAA

Protein sequence

MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNRLMDRLSNAYEKRSLLSRYPSSSKLVTST
Homology
[Close]
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match: PP187_ARATH (Pentatricopeptide repeat-containing protein At2g36240 OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 3.0e-135
Identity = 222/366 (60.66%), Postives = 293/366 (80.05%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           M+R+LAAT RF +L  LL F+A++PCPCS GIFSCP+ E IF+ AI AYCRA K D A+ 
Sbjct: 119 MSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALL 178

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFD+MK+LIDGKP+V +YN ++NG+VKSG  +KAL FY RM  +R KPD+ TFNILI+GY
Sbjct: 179 AFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGY 238

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CR+S+F LAL+LF+EM+EKGC PNVVSFNTLI+GF    K ++G+ MAYEMIELGC+FS 
Sbjct: 239 CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSE 298

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
            TCEI++DGLCREGRV +AC +++D   KRVLP ++DY  ++EKLCG+  A +AME++EE
Sbjct: 299 ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE 358

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW++G  P FIA TTL++GLRK GR   A    E+++   ++PDSVT N LL++LC++  
Sbjct: 359 LWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           + +ANRLRLLASSKG+EPD  TY++L+SG+T EG + EG+ +V+EMLDK+++PDI TYNR
Sbjct: 419 STDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNR 478

Query: 361 LMDRLS 367
           LMD LS
Sbjct: 479 LMDGLS 484

[Close]
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-49
Identity = 106/325 (32.62%), Postives = 174/325 (53.54%), Query Frame = 1 

Query: 42  FQFAITAYCRAAKFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRM 101
           +   I+ YC+A + + A+   D M       P VV YN ++     SG+  +A+   DRM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 234

Query: 102 LSDRVKPDLYTFNILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKF 161
           L     PD+ T+ ILI   CR+S    A++L  EMR++GC P+VV++N L+ G  +E + 
Sbjct: 235 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 294

Query: 162 DDGIAMAYEMIELGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGV 221
           D+ I    +M   GC+ + +T  I++  +C  GR  +A ++L D  RK   P    +  +
Sbjct: 295 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 354

Query: 222 IEKLCGKGNAGKAMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAM 281
           I  LC KG  G+A++++E++ + G  P+ ++   L+ G  KE +++ A+   ER++    
Sbjct: 355 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 414

Query: 282 VPDSVTLNSLLQELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQR 341
            PD VT N++L  LC   +  +A  +    SSKG  P   TY  +I G    G   +  +
Sbjct: 415 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 474

Query: 342 VVDEMLDKELIPDIATYNRLMDRLS 367
           ++DEM  K+L PD  TY+ L+  LS
Sbjct: 475 LLDEMRAKDLKPDTITYSSLVGGLS 495

[Close]
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.6e-48
Identity = 104/337 (30.86%), Postives = 181/337 (53.71%), Query Frame = 1 

Query: 35  CPQTESIFQFAITAYCRAAKFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGR-FNK 94
           C  T S+F   + +Y R +  D+A+ +   + +     P V+ YN +++  ++S R  + 
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKAL-SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 189

Query: 95  ALGFYDRMLSDRVKPDLYTFNILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIK 154
           A   +  ML  +V P+++T+NILI G+C      +AL LF +M  KGC PNVV++NTLI 
Sbjct: 190 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 249

Query: 155 GFFRERKFDDGIAMAYEMIELGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLP 214
           G+ + RK DDG  +   M   G + + ++  +V++GLCREGR+ E   +L + +R+    
Sbjct: 250 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 309

Query: 215 KDYDYFGVIEKLCGKGNAGKAMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLT 274
            +  Y  +I+  C +GN  +A+ +  E+ R G  PS I  T+LI  + K G +N AM   
Sbjct: 310 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 369

Query: 275 ERVLKEAMVPDSVTLNSLLQELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTME 334
           +++    + P+  T  +L+          EA R+    +  GF P   TY  LI+G+ + 
Sbjct: 370 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 429

Query: 335 GNKVEGQRVVDEMLDKELIPDIATYNRLMDRLSNAYE 371
           G   +   V+++M +K L PD+ +Y+ ++     +Y+
Sbjct: 430 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

[Close]
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-44
Identity = 104/362 (28.73%), Postives = 176/362 (48.62%), Query Frame = 1 

Query: 5   LAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVFAFDS 64
           L  +  F ++K +L+ + SS C             S F   I +Y +    DE +   D 
Sbjct: 93  LGRSGSFDDMKKILEDMKSSRCEMGT---------STFLILIESYAQFELQDEILSVVDW 152

Query: 65  MKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGYCRNS 124
           M      KP    YN ++N  V           + +M    +KPD+ TFN+LI   CR  
Sbjct: 153 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 212

Query: 125 QFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSSVTCE 184
           Q   A+ + ++M   G  P+  +F T+++G+  E   D  + +  +M+E GC +S+V+  
Sbjct: 213 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 272

Query: 185 IVMDGLCREGRVHEACEILIDFSRK-RVLPKDYDYFGVIEKLCGKGNAGKAMEVVEELWR 244
           +++ G C+EGRV +A   + + S +    P  Y +  ++  LC  G+   A+E+++ + +
Sbjct: 273 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 332

Query: 245 EGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARRTVE 304
           EG  P      ++I GL K G V +A+ + ++++     P++VT N+L+  LC   +  E
Sbjct: 333 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 392

Query: 305 ANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNRLMD 364
           A  L  + +SKG  PD  T+  LI G  +  N      + +EM  K   PD  TYN L+D
Sbjct: 393 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 445

Query: 365 RL 366
            L
Sbjct: 453 SL 445

[Close]
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.3e-41
Identity = 100/321 (31.15%), Postives = 172/321 (53.58%), Query Frame = 1 

Query: 54  KFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTF 113
           K D+AV  F  M K     PS+V ++ L++   K  +F+  +   ++M +  +  +LYT+
Sbjct: 61  KLDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 120

Query: 114 NILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIE 173
           +ILI+ +CR SQ +LAL +  +M + G  P++V+ N+L+ GF    +  D +++  +M+E
Sbjct: 121 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 180

Query: 174 LGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGK 233
           +G +  S T   ++ GL R  R  EA  ++     K   P    Y  V+  LC +G+   
Sbjct: 181 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 240

Query: 234 AMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQ 293
           A+ +++++ +    P  +   T+ID L     VNDA+NL   +  + + P+ VT NSL++
Sbjct: 241 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 300

Query: 294 ELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIP 353
            LCN  R  +A+RL      +   P+  T+  LI  +  EG  VE +++ DEM+ + + P
Sbjct: 301 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 360

Query: 354 DIATYNRLM------DRLSNA 369
           DI TY+ L+      DRL  A
Sbjct: 361 DIFTYSSLINGFCMHDRLDEA 380

[Close]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match: A0A0A0KA47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087810 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 3.3e-189
Identity = 321/375 (85.60%), Postives = 353/375 (94.13%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA TDRF EL SLL+FLASSPCPCSDGIFSCPQTESIFQF+I+AYCRA KFDEAVF
Sbjct: 1   MARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQTESIFQFSISAYCRARKFDEAVF 60

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDG+PSVV+YNILINGFVKSGRF+KALGFY RMLSDRVKPD+YTFNILISGY
Sbjct: 61  AFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDVYTFNILISGY 120

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNSQF  ALELFKEMREKGC PNV+SFNTLIKGFFRERKF+DGIA+AYEMIELGCKFSS
Sbjct: 121 CRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSS 180

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI+MDGL REG++ EACEIL+DFSRK+VLPKDYDY+GV+E LCGKGNAGKAMEVV+E
Sbjct: 181 VTCEILMDGLSREGKIFEACEILLDFSRKQVLPKDYDYYGVVEMLCGKGNAGKAMEVVDE 240

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW EGNVPSFI STTLIDGLRKEGRVNDAMN+TER+L+  M+PDSVT NSLLQ+LCN R+
Sbjct: 241 LWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRK 300

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEAN+LRLLASSKGFEPD+KTYY L+SGYTMEGNKVEGQR+V+EMLDKE IPDIATYNR
Sbjct: 301 TVEANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNR 360

Query: 361 LMDRLSNAYEKRSLL 376
           LMDRL N ++KRS L
Sbjct: 361 LMDRLLNTHKKRSKL 375

[Close]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match: W9R2G2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025847 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 3.2e-152
Identity = 264/367 (71.93%), Postives = 310/367 (84.47%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA +DRF+EL +LL FLA++PCPCSDGIFSC +TE IF+FAI AYCR  K + AV 
Sbjct: 176 MARTLAVSDRFSELAALLDFLAANPCPCSDGIFSCSRTEPIFRFAINAYCRVGKLECAVS 235

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDGKPSVV+ N LINGFVK G  +KAL FY+RM   RVKPD++TFNIL+S Y
Sbjct: 236 AFDSMRKLIDGKPSVVVCNTLINGFVKWGEHDKALEFYNRMSGYRVKPDVFTFNILLSSY 295

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNS+F  ALELF+EMRE GC PNVVSFN+LIKGFFRERKF++GI MAYEMI+LGC FS 
Sbjct: 296 CRNSKFGSALELFREMREMGCSPNVVSFNSLIKGFFRERKFEEGIGMAYEMIDLGCGFSP 355

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI++DGLCREGRV EACEILIDFSRKRVLP  YDYFG++E LC KGN+ +A+EVV E
Sbjct: 356 VTCEILVDGLCREGRVLEACEILIDFSRKRVLPDGYDYFGLVEILCRKGNSERALEVVNE 415

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LWR GN PS IA TTLI+GLRK GR ++A  LTER++KE +VPD++T N LLQ+LCN  R
Sbjct: 416 LWRRGNSPSLIACTTLIEGLRKPGRSDEAFGLTERMIKEGLVPDNLTFNCLLQDLCNVGR 475

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEA++LRLLASSKGF PDS  Y IL+SGYT EG + EG+++VDEMLDK  IPDIA+YNR
Sbjct: 476 TVEADKLRLLASSKGFVPDSMAYNILVSGYTKEGERKEGEKLVDEMLDKGFIPDIASYNR 535

Query: 361 LMDRLSN 368
           LMDRL+N
Sbjct: 536 LMDRLAN 542

[Close]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match: A0A059BBC4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00971 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 4.2e-144
Identity = 246/368 (66.85%), Postives = 307/368 (83.42%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA + RFA+L SLLQF+AS+PCPCSDGIFSCP+TE IFQF+I AYCRA K +EAV 
Sbjct: 164 MARTLAISSRFAQLNSLLQFMASNPCPCSDGIFSCPRTEPIFQFSIEAYCRAQKLEEAVI 223

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AF+SM+K+IDG+PS V YN LI+GFVK G   +AL  YD+M+ +RVKP++ TFNILIS Y
Sbjct: 224 AFESMEKMIDGRPSAVSYNALIHGFVKWGDHARALAIYDQMIRNRVKPNVITFNILISSY 283

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CR+SQF LALE+FKEM+EKGC P+VVSFNTLI+GFFRERKF+D IAMAYEMIELGC+ SS
Sbjct: 284 CRSSQFGLALEVFKEMKEKGCSPDVVSFNTLIRGFFRERKFEDAIAMAYEMIELGCQLSS 343

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI++DGLCREG+V EACE+LI FS KRVLP++YDYFG++E LC  GN+ +A++VV +
Sbjct: 344 VTCEILVDGLCREGKVAEACELLIGFSSKRVLPEEYDYFGLVEALCSSGNSHRALDVVTD 403

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW+ GN+PS IA TTL++GLRK+ +  +A+ L E +LKE +VPD VT N LL++L +  +
Sbjct: 404 LWKTGNIPSLIACTTLVEGLRKQKKREEALALMENMLKEGIVPDIVTFNCLLEDLSDIGK 463

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEAN+LRLLA SKG EPD   Y IL+SG+T E  + EGQ +VDEMLDK+ IPD+ATYNR
Sbjct: 464 TVEANKLRLLAQSKGLEPDGMMYRILVSGFTRERKRKEGQILVDEMLDKDFIPDLATYNR 523

Query: 361 LMDRLSNA 369
           L+D LSN+
Sbjct: 524 LIDGLSNS 531

[Close]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match: V4SWL5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011570mg PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.4e-142
Identity = 240/369 (65.04%), Postives = 313/369 (84.82%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCS-DGIFSCPQTESIFQFAITAYCRAAKFDEAV 60
           + R+LA++ RF+EL+S+L F++++PCPCS DGIFSCP+ E IF FA+ A+ +A + ++ +
Sbjct: 116 IVRSLASSYRFSELQSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 175

Query: 61  FAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISG 120
            AF++M+KLIDG+PSV IYN+LINGFVK   F+KALGFYDRM+ DRVKPD+ TFNILISG
Sbjct: 176 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 235

Query: 121 YCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFS 180
           +CRN +F LAL LF+EMREKGC PNVVSFNTLI+GFF ERKFD+G+ MAYEMIELGC+FS
Sbjct: 236 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 295

Query: 181 SVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVE 240
           SVTCEI++DGLC EGRV +ACE++IDFSR+ V PKD+DYFG++EKLCG+GNAG+A+EVV+
Sbjct: 296 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVWPKDFDYFGLVEKLCGEGNAGRALEVVD 355

Query: 241 ELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNAR 300
           ELW++GN+PS IA TTLI+GLR+  +  +A  L E++LKE ++PDSVT N LL++LC+  
Sbjct: 356 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 415

Query: 301 RTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYN 360
           RTV+A+RLRLLAS+KG +PD  TY+IL+SGYT E  + EG+ +V+EMLD+  IPD+ATYN
Sbjct: 416 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 475

Query: 361 RLMDRLSNA 369
             MD LSNA
Sbjct: 476 SYMDGLSNA 484

[Close]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match: A0A067FW79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011201mg PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-142
Identity = 241/369 (65.31%), Postives = 312/369 (84.55%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCS-DGIFSCPQTESIFQFAITAYCRAAKFDEAV 60
           + R+LA++ RF+EL S+L F++++PCPCS DGIFSCP+ E IF FA+ A+ +A + ++ +
Sbjct: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174

Query: 61  FAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISG 120
            AF++M+KLIDG+PSV IYN+LINGFVK   F+KALGFYDRM+ DRVKPD+ TFNILISG
Sbjct: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234

Query: 121 YCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFS 180
           +CRN +F LAL LF+EMREKGC PNVVSFNTLI+GFF ERKFD+G+ MAYEMIELGC+FS
Sbjct: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294

Query: 181 SVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVE 240
           SVTCEI++DGLC EGRV +ACE++IDFSR+ VLPKD+DYFG++EKLCG+GNAG A+EVV+
Sbjct: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354

Query: 241 ELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNAR 300
           ELW++GN+PS IA TTLI+GLR+  +  +A  L E++LKE ++PDSVT N LL++LC+  
Sbjct: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414

Query: 301 RTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYN 360
           RTV+A+RLRLLAS+KG +PD  TY+IL+SGYT E  + EG+ +V+EMLD+  IPD+ATYN
Sbjct: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474

Query: 361 RLMDRLSNA 369
             MD LSNA
Sbjct: 475 SYMDGLSNA 483

[Close]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match: AT2G36240.1 (AT2G36240.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-136
Identity = 222/366 (60.66%), Postives = 293/366 (80.05%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           M+R+LAAT RF +L  LL F+A++PCPCS GIFSCP+ E IF+ AI AYCRA K D A+ 
Sbjct: 119 MSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALL 178

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFD+MK+LIDGKP+V +YN ++NG+VKSG  +KAL FY RM  +R KPD+ TFNILI+GY
Sbjct: 179 AFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGY 238

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CR+S+F LAL+LF+EM+EKGC PNVVSFNTLI+GF    K ++G+ MAYEMIELGC+FS 
Sbjct: 239 CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSE 298

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
            TCEI++DGLCREGRV +AC +++D   KRVLP ++DY  ++EKLCG+  A +AME++EE
Sbjct: 299 ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE 358

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW++G  P FIA TTL++GLRK GR   A    E+++   ++PDSVT N LL++LC++  
Sbjct: 359 LWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           + +ANRLRLLASSKG+EPD  TY++L+SG+T EG + EG+ +V+EMLDK+++PDI TYNR
Sbjct: 419 STDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNR 478

Query: 361 LMDRLS 367
           LMD LS
Sbjct: 479 LMDGLS 484

[Close]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-50
Identity = 106/325 (32.62%), Postives = 174/325 (53.54%), Query Frame = 1 

Query: 42  FQFAITAYCRAAKFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRM 101
           +   I+ YC+A + + A+   D M       P VV YN ++     SG+  +A+   DRM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 234

Query: 102 LSDRVKPDLYTFNILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKF 161
           L     PD+ T+ ILI   CR+S    A++L  EMR++GC P+VV++N L+ G  +E + 
Sbjct: 235 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 294

Query: 162 DDGIAMAYEMIELGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGV 221
           D+ I    +M   GC+ + +T  I++  +C  GR  +A ++L D  RK   P    +  +
Sbjct: 295 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 354

Query: 222 IEKLCGKGNAGKAMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAM 281
           I  LC KG  G+A++++E++ + G  P+ ++   L+ G  KE +++ A+   ER++    
Sbjct: 355 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 414

Query: 282 VPDSVTLNSLLQELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQR 341
            PD VT N++L  LC   +  +A  +    SSKG  P   TY  +I G    G   +  +
Sbjct: 415 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 474

Query: 342 VVDEMLDKELIPDIATYNRLMDRLS 367
           ++DEM  K+L PD  TY+ L+  LS
Sbjct: 475 LLDEMRAKDLKPDTITYSSLVGGLS 495

[Close]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-49
Identity = 104/337 (30.86%), Postives = 181/337 (53.71%), Query Frame = 1 

Query: 35  CPQTESIFQFAITAYCRAAKFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGR-FNK 94
           C  T S+F   + +Y R +  D+A+ +   + +     P V+ YN +++  ++S R  + 
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKAL-SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 189

Query: 95  ALGFYDRMLSDRVKPDLYTFNILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIK 154
           A   +  ML  +V P+++T+NILI G+C      +AL LF +M  KGC PNVV++NTLI 
Sbjct: 190 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 249

Query: 155 GFFRERKFDDGIAMAYEMIELGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLP 214
           G+ + RK DDG  +   M   G + + ++  +V++GLCREGR+ E   +L + +R+    
Sbjct: 250 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 309

Query: 215 KDYDYFGVIEKLCGKGNAGKAMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLT 274
            +  Y  +I+  C +GN  +A+ +  E+ R G  PS I  T+LI  + K G +N AM   
Sbjct: 310 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 369

Query: 275 ERVLKEAMVPDSVTLNSLLQELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTME 334
           +++    + P+  T  +L+          EA R+    +  GF P   TY  LI+G+ + 
Sbjct: 370 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 429

Query: 335 GNKVEGQRVVDEMLDKELIPDIATYNRLMDRLSNAYE 371
           G   +   V+++M +K L PD+ +Y+ ++     +Y+
Sbjct: 430 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

[Close]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match: AT3G53700.1 (AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-45
Identity = 104/362 (28.73%), Postives = 176/362 (48.62%), Query Frame = 1 

Query: 5   LAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVFAFDS 64
           L  +  F ++K +L+ + SS C             S F   I +Y +    DE +   D 
Sbjct: 93  LGRSGSFDDMKKILEDMKSSRCEMGT---------STFLILIESYAQFELQDEILSVVDW 152

Query: 65  MKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGYCRNS 124
           M      KP    YN ++N  V           + +M    +KPD+ TFN+LI   CR  
Sbjct: 153 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 212

Query: 125 QFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSSVTCE 184
           Q   A+ + ++M   G  P+  +F T+++G+  E   D  + +  +M+E GC +S+V+  
Sbjct: 213 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 272

Query: 185 IVMDGLCREGRVHEACEILIDFSRK-RVLPKDYDYFGVIEKLCGKGNAGKAMEVVEELWR 244
           +++ G C+EGRV +A   + + S +    P  Y +  ++  LC  G+   A+E+++ + +
Sbjct: 273 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 332

Query: 245 EGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARRTVE 304
           EG  P      ++I GL K G V +A+ + ++++     P++VT N+L+  LC   +  E
Sbjct: 333 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 392

Query: 305 ANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNRLMD 364
           A  L  + +SKG  PD  T+  LI G  +  N      + +EM  K   PD  TYN L+D
Sbjct: 393 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 445

Query: 365 RL 366
            L
Sbjct: 453 SL 445

[Close]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-42
Identity = 100/321 (31.15%), Postives = 172/321 (53.58%), Query Frame = 1 

Query: 54  KFDEAVFAFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTF 113
           K D+AV  F  M K     PS+V ++ L++   K  +F+  +   ++M +  +  +LYT+
Sbjct: 61  KLDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 120

Query: 114 NILISGYCRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIE 173
           +ILI+ +CR SQ +LAL +  +M + G  P++V+ N+L+ GF    +  D +++  +M+E
Sbjct: 121 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 180

Query: 174 LGCKFSSVTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGK 233
           +G +  S T   ++ GL R  R  EA  ++     K   P    Y  V+  LC +G+   
Sbjct: 181 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 240

Query: 234 AMEVVEELWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQ 293
           A+ +++++ +    P  +   T+ID L     VNDA+NL   +  + + P+ VT NSL++
Sbjct: 241 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 300

Query: 294 ELCNARRTVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIP 353
            LCN  R  +A+RL      +   P+  T+  LI  +  EG  VE +++ DEM+ + + P
Sbjct: 301 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 360

Query: 354 DIATYNRLM------DRLSNA 369
           DI TY+ L+      DRL  A
Sbjct: 361 DIFTYSSLINGFCMHDRLDEA 380

[Close]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match: gi|449445824|ref|XP_004140672.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis sativus])

HSP 1 Score: 669.1 bits (1725), Expect = 4.7e-189
Identity = 321/375 (85.60%), Postives = 353/375 (94.13%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA TDRF EL SLL+FLASSPCPCSDGIFSCPQTESIFQF+I+AYCRA KFDEAVF
Sbjct: 110 MARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQTESIFQFSISAYCRARKFDEAVF 169

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDG+PSVV+YNILINGFVKSGRF+KALGFY RMLSDRVKPD+YTFNILISGY
Sbjct: 170 AFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDVYTFNILISGY 229

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNSQF  ALELFKEMREKGC PNV+SFNTLIKGFFRERKF+DGIA+AYEMIELGCKFSS
Sbjct: 230 CRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSS 289

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI+MDGL REG++ EACEIL+DFSRK+VLPKDYDY+GV+E LCGKGNAGKAMEVV+E
Sbjct: 290 VTCEILMDGLSREGKIFEACEILLDFSRKQVLPKDYDYYGVVEMLCGKGNAGKAMEVVDE 349

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW EGNVPSFI STTLIDGLRKEGRVNDAMN+TER+L+  M+PDSVT NSLLQ+LCN R+
Sbjct: 350 LWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRK 409

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEAN+LRLLASSKGFEPD+KTYY L+SGYTMEGNKVEGQR+V+EMLDKE IPDIATYNR
Sbjct: 410 TVEANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNR 469

Query: 361 LMDRLSNAYEKRSLL 376
           LMDRL N ++KRS L
Sbjct: 470 LMDRLLNTHKKRSKL 484

[Close]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match: gi|700191149|gb|KGN46353.1| (hypothetical protein Csa_6G087810 [Cucumis sativus])

HSP 1 Score: 669.1 bits (1725), Expect = 4.7e-189
Identity = 321/375 (85.60%), Postives = 353/375 (94.13%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA TDRF EL SLL+FLASSPCPCSDGIFSCPQTESIFQF+I+AYCRA KFDEAVF
Sbjct: 1   MARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQTESIFQFSISAYCRARKFDEAVF 60

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDG+PSVV+YNILINGFVKSGRF+KALGFY RMLSDRVKPD+YTFNILISGY
Sbjct: 61  AFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDVYTFNILISGY 120

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNSQF  ALELFKEMREKGC PNV+SFNTLIKGFFRERKF+DGIA+AYEMIELGCKFSS
Sbjct: 121 CRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSS 180

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI+MDGL REG++ EACEIL+DFSRK+VLPKDYDY+GV+E LCGKGNAGKAMEVV+E
Sbjct: 181 VTCEILMDGLSREGKIFEACEILLDFSRKQVLPKDYDYYGVVEMLCGKGNAGKAMEVVDE 240

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW EGNVPSFI STTLIDGLRKEGRVNDAMN+TER+L+  M+PDSVT NSLLQ+LCN R+
Sbjct: 241 LWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRK 300

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEAN+LRLLASSKGFEPD+KTYY L+SGYTMEGNKVEGQR+V+EMLDKE IPDIATYNR
Sbjct: 301 TVEANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNR 360

Query: 361 LMDRLSNAYEKRSLL 376
           LMDRL N ++KRS L
Sbjct: 361 LMDRLLNTHKKRSKL 375

[Close]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match: gi|659120062|ref|XP_008459992.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis melo])

HSP 1 Score: 665.2 bits (1715), Expect = 6.8e-188
Identity = 318/375 (84.80%), Postives = 350/375 (93.33%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA TDRF EL SLL+FLASSPCPCSDGIFSCPQTES+FQ +I+AYCRA KFDEAVF
Sbjct: 110 MARTLATTDRFTELTSLLRFLASSPCPCSDGIFSCPQTESVFQLSISAYCRARKFDEAVF 169

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDG+PSVV+YNILINGFVKSGRF+KALGFY RM+SDRVKPD+YTFNILISGY
Sbjct: 170 AFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYGRMISDRVKPDVYTFNILISGY 229

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNSQF  ALELFKEMREKGC PNV+SFNTLIKGFFRERKF+DGIA+AYEMIELGCKFSS
Sbjct: 230 CRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSS 289

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI+MDGLCREG++ EACEILIDFSRK+VLPKDYDY+GV+E LCGKGN GKA+EVV E
Sbjct: 290 VTCEILMDGLCREGKIFEACEILIDFSRKQVLPKDYDYYGVVEMLCGKGNTGKAVEVVNE 349

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LW EGNVPSFI STTLIDGLRKEGRV+DAMN+TER+LK  MVPDSVT NSLLQ+LCN  +
Sbjct: 350 LWMEGNVPSFITSTTLIDGLRKEGRVHDAMNITERMLKVGMVPDSVTFNSLLQDLCNVGK 409

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEAN+LRLLASSKGFEPD+KTYY L+SGYTMEGNKVEGQR+V+EMLDKE IPDIATYNR
Sbjct: 410 TVEANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNR 469

Query: 361 LMDRLSNAYEKRSLL 376
           LMDRL N Y+K+S L
Sbjct: 470 LMDRLLNTYKKKSKL 484

[Close]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match: gi|645277037|ref|XP_008243575.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Prunus mume])

HSP 1 Score: 547.0 bits (1408), Expect = 2.7e-152
Identity = 261/363 (71.90%), Postives = 307/363 (84.57%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA TDRF EL SLL F+ S+PCPCSDGIFSCP+TE IFQFAI AYCR  +  +AV 
Sbjct: 116 MARTLAITDRFVELGSLLSFMVSNPCPCSDGIFSCPRTEPIFQFAINAYCRVGRLGDAVN 175

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDG+PSVV+YNILI+GFVK G+ +KALG YD+M+ DRVK D++TFNILIS Y
Sbjct: 176 AFDSMRKLIDGRPSVVVYNILIHGFVKCGQHDKALGLYDKMMKDRVKADVFTFNILISSY 235

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNSQF LALELFK+MREKGC PNVVSFNTLIKGFFRERKFDDGI MAYEMIE GCKFSS
Sbjct: 236 CRNSQFGLALELFKDMREKGCSPNVVSFNTLIKGFFRERKFDDGIGMAYEMIEFGCKFSS 295

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI++DGLCREGRV EACE+LIDFSRK VLPK YDY G+IE LC KGN+G+A+EVV++
Sbjct: 296 VTCEILVDGLCREGRVSEACELLIDFSRKGVLPKWYDYLGLIEVLCKKGNSGRALEVVDD 355

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LWR+GNVP  IA TTLI+GLR+  R+++A  L +R+L+E +VPD VT N LLQ+LCN RR
Sbjct: 356 LWRKGNVPGLIACTTLIEGLRRSARIDEAFGLMKRMLEEGIVPDIVTFNCLLQDLCNLRR 415

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEA+ L+LL+SSKG + DS  Y IL+SGY+ EG + E + +VDEMLDK  IPD+ TYNR
Sbjct: 416 TVEADSLKLLSSSKGLDLDSTAYSILVSGYSREGKRKEQKLLVDEMLDKGFIPDLGTYNR 475

Query: 361 LMD 364
           L D
Sbjct: 476 LAD 478

[Close]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match: gi|703099748|ref|XP_010096729.1| (hypothetical protein L484_025847 [Morus notabilis])

HSP 1 Score: 546.2 bits (1406), Expect = 4.6e-152
Identity = 264/367 (71.93%), Postives = 310/367 (84.47%), Query Frame = 1 

Query: 1   MARTLAATDRFAELKSLLQFLASSPCPCSDGIFSCPQTESIFQFAITAYCRAAKFDEAVF 60
           MARTLA +DRF+EL +LL FLA++PCPCSDGIFSC +TE IF+FAI AYCR  K + AV 
Sbjct: 176 MARTLAVSDRFSELAALLDFLAANPCPCSDGIFSCSRTEPIFRFAINAYCRVGKLECAVS 235

Query: 61  AFDSMKKLIDGKPSVVIYNILINGFVKSGRFNKALGFYDRMLSDRVKPDLYTFNILISGY 120
           AFDSM+KLIDGKPSVV+ N LINGFVK G  +KAL FY+RM   RVKPD++TFNIL+S Y
Sbjct: 236 AFDSMRKLIDGKPSVVVCNTLINGFVKWGEHDKALEFYNRMSGYRVKPDVFTFNILLSSY 295

Query: 121 CRNSQFALALELFKEMREKGCCPNVVSFNTLIKGFFRERKFDDGIAMAYEMIELGCKFSS 180
           CRNS+F  ALELF+EMRE GC PNVVSFN+LIKGFFRERKF++GI MAYEMI+LGC FS 
Sbjct: 296 CRNSKFGSALELFREMREMGCSPNVVSFNSLIKGFFRERKFEEGIGMAYEMIDLGCGFSP 355

Query: 181 VTCEIVMDGLCREGRVHEACEILIDFSRKRVLPKDYDYFGVIEKLCGKGNAGKAMEVVEE 240
           VTCEI++DGLCREGRV EACEILIDFSRKRVLP  YDYFG++E LC KGN+ +A+EVV E
Sbjct: 356 VTCEILVDGLCREGRVLEACEILIDFSRKRVLPDGYDYFGLVEILCRKGNSERALEVVNE 415

Query: 241 LWREGNVPSFIASTTLIDGLRKEGRVNDAMNLTERVLKEAMVPDSVTLNSLLQELCNARR 300
           LWR GN PS IA TTLI+GLRK GR ++A  LTER++KE +VPD++T N LLQ+LCN  R
Sbjct: 416 LWRRGNSPSLIACTTLIEGLRKPGRSDEAFGLTERMIKEGLVPDNLTFNCLLQDLCNVGR 475

Query: 301 TVEANRLRLLASSKGFEPDSKTYYILISGYTMEGNKVEGQRVVDEMLDKELIPDIATYNR 360
           TVEA++LRLLASSKGF PDS  Y IL+SGYT EG + EG+++VDEMLDK  IPDIA+YNR
Sbjct: 476 TVEADKLRLLASSKGFVPDSMAYNILVSGYTKEGERKEGEKLVDEMLDKGFIPDIASYNR 535

Query: 361 LMDRLSN 368
           LMDRL+N
Sbjct: 536 LMDRLAN 542

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g03900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP187_ARATH3.0e-13560.66Pentatricopeptide repeat-containing protein At2g36240 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH4.3e-4932.62Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH3.6e-4830.86Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP281_ARATH5.4e-4428.73Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PPR99_ARATH4.3e-4131.15Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG10g03900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA47_CUCSA3.3e-18985.60Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087810 PE=4 SV=1[more]
W9R2G2_9ROSA3.2e-15271.93Uncharacterized protein OS=Morus notabilis GN=L484_025847 PE=4 SV=1[more]
A0A059BBC4_EUCGR4.2e-14466.85Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00971 PE=4 SV=1[more]
V4SWL5_9ROSI1.4e-14265.04Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011570mg PE=4 SV=1[more]
A0A067FW79_CITSI1.8e-14265.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011201mg PE=4 SV=1[more]
BLAST of Cp4.1LG10g03900 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36240.11.7e-13660.66 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G09900.12.4e-5032.62 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.12.1e-4930.86 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53700.13.1e-4528.73 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63130.12.4e-4231.15 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG10g03900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445824|ref|XP_004140672.1|4.7e-18985.60PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis sativu... [more]
gi|700191149|gb|KGN46353.1|4.7e-18985.60hypothetical protein Csa_6G087810 [Cucumis sativus][more]
gi|659120062|ref|XP_008459992.1|6.8e-18884.80PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Cucumis melo][more]
gi|645277037|ref|XP_008243575.1|2.7e-15271.90PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Prunus mume][more]
gi|703099748|ref|XP_010096729.1|4.6e-15271.93hypothetical protein L484_025847 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g03900.1Cp4.1LG10g03900.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 46..67
score: 0.064coord: 254..275
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 283..330
score: 7.9E-8coord: 73..122
score: 2.2E-17coord: 143..192
score: 6.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 111..145
score: 3.2E-13coord: 181..213
score: 5.6E-5coord: 76..109
score: 1.8E-10coord: 146..178
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 144..178
score: 10.402coord: 319..353
score: 9.876coord: 249..283
score: 8.342coord: 38..68
score: 7.498coord: 109..143
score: 14.502coord: 179..213
score: 9.898coord: 284..318
score: 9.021coord: 214..248
score: 7.53coord: 74..108
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 48..139
score: 4.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..368
score: 5.4E
NoneNo IPR availablePANTHERPTHR24015:SF313SUBFAMILY NOT NAMEDcoord: 1..368
score: 5.4E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 49..180
score: 7.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g03900Carg10480Silver-seed gourdcarcpeB0337
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g03900Cucumber (Chinese Long) v3cpecucB0069
Cp4.1LG10g03900Cucumber (Chinese Long) v3cpecucB0093
Cp4.1LG10g03900Wax gourdcpewgoB0066
Cp4.1LG10g03900Wax gourdcpewgoB0101
Cp4.1LG10g03900Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g03900Cucurbita pepo (Zucchini)cpecpeB092
Cp4.1LG10g03900Cucurbita pepo (Zucchini)cpecpeB106
Cp4.1LG10g03900Cucumber (Gy14) v1cgycpeB0145
Cp4.1LG10g03900Cucumber (Gy14) v1cgycpeB0638
Cp4.1LG10g03900Cucurbita maxima (Rimu)cmacpeB254
Cp4.1LG10g03900Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g03900Cucurbita maxima (Rimu)cmacpeB807
Cp4.1LG10g03900Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g03900Cucurbita moschata (Rifu)cmocpeB218
Cp4.1LG10g03900Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g03900Cucurbita moschata (Rifu)cmocpeB761
Cp4.1LG10g03900Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g03900Wild cucumber (PI 183967)cpecpiB059
Cp4.1LG10g03900Wild cucumber (PI 183967)cpecpiB081
Cp4.1LG10g03900Cucumber (Chinese Long) v2cpecuB063
Cp4.1LG10g03900Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g03900Bottle gourd (USVL1VR-Ls)cpelsiB047
Cp4.1LG10g03900Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g03900Bottle gourd (USVL1VR-Ls)cpelsiB062
Cp4.1LG10g03900Watermelon (Charleston Gray)cpewcgB057
Cp4.1LG10g03900Watermelon (Charleston Gray)cpewcgB067
Cp4.1LG10g03900Watermelon (Charleston Gray)cpewcgB071
Cp4.1LG10g03900Watermelon (97103) v1cpewmB064
Cp4.1LG10g03900Watermelon (97103) v1cpewmB078
Cp4.1LG10g03900Watermelon (97103) v1cpewmB092
Cp4.1LG10g03900Melon (DHL92) v3.5.1cpemeB054
Cp4.1LG10g03900Melon (DHL92) v3.5.1cpemeB069
Cp4.1LG10g03900Cucumber (Gy14) v2cgybcpeB290
Cp4.1LG10g03900Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g03900Melon (DHL92) v3.6.1cpemedB071
Cp4.1LG10g03900Melon (DHL92) v3.6.1cpemedB090
Cp4.1LG10g03900Silver-seed gourdcarcpeB0213
Cp4.1LG10g03900Silver-seed gourdcarcpeB0348
Cp4.1LG10g03900Silver-seed gourdcarcpeB1128