Cp4.1LG10g03260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g03260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAlba DNA/RNA-binding protein
LocationCp4.1LG10 : 2123545 .. 2126466 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCAATTGGGCCGAAGAGGGAATGTGAAATGGGCCCAACTCCACAGAGAATCTGCTGATAGTGAAGATGGCGGAGGGGGATTGGTAGATGGCAGTGATCGAGGAGGATTACGTGCGGTAGCGTCGGCGGTAAGACCGGGACCTCAAAGCCCTACTCTCACTGGATCATACTCGGCCACCCCTTTTCTTCTCCTTTTCTTTCTATATATAAAATCCACGGGGCCTTCGGAGGGGCTTAGTTTTTGAAACCACCCACTGCCCAATCAAATAGGTGAATTCACGCACAGATGGAGTGGTTGTAGATTCTTCTATCGGTTGCGAGCTTCTCCAGATTATTCCCTTCTTCGTTTCTTCTTCTACTACTCAGACCACTCACGGTAACACATCATTAACTCTTGCGTGCTGTTTATATTTTGAGCGTTAATTCGTGTATTCAATCCTGCGTTGTTGTTTGTTGTGTCAGATGGATAGGTACCAGAGAGTGGAGAAGCCGAAGTTAGAGAACTCTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGGAACTACATTACTTATGCCACCACTCTTCTCCAGGTTCGTTTCTTCTCTCGACTGTATTTGCTCGTGTACAATTATGGGTATTACTTAATTATGTGAGTGAAGAACAACGTCCAATTTGTACTTCTAATTTTGTAGTGTTCCTGCTTTTAATACTCCAAATGCCTGATTCGAGGTCAATTTTATTTATCTTTTAGAGACATTATTTAATGCCAAAGTTTTGTTTTATGCTATTACTTTATTTGTTAGTGCTTTTCTTTTGCCATGAAAAACTGGAAACCTTGCTTTTGATTTTGTATCAATATCAATTAGGGGGCTCTACGCATAGAGATGTCTTTTCACTAATGACTACAATTCTCTATCCACTTTCTTTCTCACTAAGGTCTCTCGAAAGAGAATCCACTCCGCCCTTAACTCATTAACGAAAAAGATAAGGTCATTCCATTTCAACAAAAGACCCTCCTAAGTTCCATAGTTTTGGGTCTACTATCTTGATCATGATTTTCCTATCTTAGTCTTTCCCTTTTTGGCCGATTGTGGGTCTGGAGGGATTCAAACCCCGGACATGGTTCGTAGCTACACATTTGCACTTTGTTTCTATTATATTGTTTTCATTTTTGGTAATGTCCAACTCTTATTTCCTGCTTGTGCATGTTCCTCTTTCACCCACAGACTCTCAATAGTTGTTTGACCGTATTATTCTTGATACTTTTCACCATCCTTAAATAAATTGTTGTTATAGCTTGATTTCATTGCTTATGATTTCTGGGTTCTTTCACAGGATAAAGAGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATCAATAAGACTGTTATGATAGCTGAACTAATTAAGGTATGGTTATTCTCTTCACCATGCTTGTTCTTTTGGTGTTCTTGCGATACCCTCTATATTATCTACCTTTTCCTTCTTATTCAGAGAAGGATTGCTTGTCTCCATCAGAGCACCGCAATTGGATCTACTGATATAACTGACATGTGGGAGCCACTCGAAGAAGGCCTTCTTCCGTATGCTTCTGAAAATTTAACACTTTTAGCTTTGTAACACACTTGTTCTGATACCTCATTTTTCTCTACACTTTGCAGTCTCGAGACTACAAGGCATGTCTCGATGGTATCAATTATCTTGTCCAAGAACGAGCTAGATGCTTCCTCCACAGGGTAAATATTTGTCATGTGGTTTGCCTAATTTGTTAAGATTCTGTATTAAAGCTCCATGTTCTTCAATATTTAAGTGGATCTGCTTCTTGACCTCCATTTTCATTTGTTTTACTTCTATTTAGGTACCAATCACCTCTTCCCGTTGACCAGGTGAAACCATGGAATGAATTAGAAGATGACGGAGGTGAATAATACAAAATGGATTTTACATTTCAATTCATTTACTCGTAGTAATGAACTGATGTTAATTAATTTGCACCAATTTACTTTGATTTAGAGGGATCGCCTAGAGGTAGAGGCAGAGGACGTGGTAGAGGAAGAGGCAGAGGTAGAGGTAAAATTATTCTCTTAAACAAGGATCATGAGAGGTTCATCTTTTCATGATCTTAATTTGAATGTCGATCTCGTGTAGGGAACTACAACGGTCCATCTTTTCATGATCTTAATTTGAATGTCGATCTCATGTAGGGAACTACAATGGTCCATCTGAGTATCAGGGCGATGGTTGGGATGGAGGGCAAGGCTTTGGAAGTAGAGGTCGTGGACGTGGACGAGGTCGTGCATTTCGTGGAAGAGGACGCGGTTATGGTTACCAATCAGGTGGATATTTTGATTATGGTGATCCTATGGCACCACCAGTACCTGGTGAGTATCCTCTTGGTTAGCCTTCTTCTTTTGGTTATAAAAGTATGTAAACTCTAGTATGCCATACCATTGTTTCGAACCCGAGCACATTCGGTTGACTATATGTTATGTAAAGGTTTTGCAGGGCGTGGTCGGGGCAGGGGGCGGGCTCGTGGCCGTGGTGGTTTTTATCGATCAGATGGTCCAGTTCAAGCAGCAGCTGCTTGAGAGGCAAATTGTTGATGAATGTGGTTGGTAACATCGGTGCCATGGGGGTAGGAGTTTTAGTTTCCTTAGCGTTTTGACATAGGAAGATTTTGGTAGCTCCTAATTAACTTCAGACCCAAATTTTTACTCTATTCAATAGGCGGTAGTGTAGAAGCAGCCGTACATTCTTTCATACCCTTTTTCAACCAAATTTAATGGAATAGCTGCATTTCTATGAATTAGTCCACCCATTTATCTATTCATAGTTAGAATGGTAAATGGTGCCTTGTTCATTGAACTATGTTGACTTTGAAATAACGGGTTCACGTGTTATCCAACAAACATGT

mRNA sequence

ATGGGCCAATTGGGCCGAAGAGGGAATGTGAAATGGGCCCAACTCCACAGAGAATCTGCTGATAGTGAAGATGGCGGAGGGGGATTGGTAGATGGCAGTGATCGAGGAGGATTACGTGCGATGGATAGGTACCAGAGAGTGGAGAAGCCGAAGTTAGAGAACTCTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGGAACTACATTACTTATGCCACCACTCTTCTCCAGGATAAAGAGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATCAATAAGACTGTTATGATAGCTGAACTAATTAAGAGAAGGATTGCTTGTCTCCATCAGAGCACCGCAATTGGATCTACTGATATAACTGACATGTGGGAGCCACTCGAAGAAGGCCTTCTTCCTCTCGAGACTACAAGGCATGTCTCGATGGTATCAATTATCTTGTCCAAGAACGAGCTAGATGCTTCCTCCACAGGGTACCAATCACCTCTTCCCGTTGACCAGGTGAAACCATGGAATGAATTAGAAGATGACGGAGAGGGATCGCCTAGAGGTAGAGGCAGAGGACGTGGTAGAGGAAGAGGCAGAGGTAGAGGGAACTACAATGGTCCATCTGAGTATCAGGGCGATGGTTGGGATGGAGGGCAAGGCTTTGGAAGTAGAGGTCGTGGACGTGGACGAGGTCGTGCATTTCGTGGAAGAGGACGCGGTTATGGTTACCAATCAGGTGGATATTTTGATTATGGTGATCCTATGGCACCACCAGTACCTGGTGAGTATCCTCTTGGTTTTGCAGGGCGTGGTCGGGGCAGGGGGCGGGCTCGTGGCCGTGGTGGTTTTTATCGATCAGATGGTCCAGTTCAAGCAGCAGCTGCTTGAGAGGCAAATTGTTGATGAATGTGGTTGGTAACATCGGTGCCATGGGGGTAGGAGTTTTAGTTTCCTTAGCGTTTTGACATAGGAAGATTTTGGTAGCTCCTAATTAACTTCAGACCCAAATTTTTACTCTATTCAATAGGCGGTAGTGTAGAAGCAGCCGTACATTCTTTCATACCCTTTTTCAACCAAATTTAATGGAATAGCTGCATTTCTATGAATTAGTCCACCCATTTATCTATTCATAGTTAGAATGGTAAATGGTGCCTTGTTCATTGAACTATGTTGACTTTGAAATAACGGGTTCACGTGTTATCCAACAAACATGT

Coding sequence (CDS)

ATGGGCCAATTGGGCCGAAGAGGGAATGTGAAATGGGCCCAACTCCACAGAGAATCTGCTGATAGTGAAGATGGCGGAGGGGGATTGGTAGATGGCAGTGATCGAGGAGGATTACGTGCGATGGATAGGTACCAGAGAGTGGAGAAGCCGAAGTTAGAGAACTCTCCTATAAACGAGAATGAGATTCGCATTACTACTCAAGGAAGGATGAGGAACTACATTACTTATGCCACCACTCTTCTCCAGGATAAAGAGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATCAATAAGACTGTTATGATAGCTGAACTAATTAAGAGAAGGATTGCTTGTCTCCATCAGAGCACCGCAATTGGATCTACTGATATAACTGACATGTGGGAGCCACTCGAAGAAGGCCTTCTTCCTCTCGAGACTACAAGGCATGTCTCGATGGTATCAATTATCTTGTCCAAGAACGAGCTAGATGCTTCCTCCACAGGGTACCAATCACCTCTTCCCGTTGACCAGGTGAAACCATGGAATGAATTAGAAGATGACGGAGAGGGATCGCCTAGAGGTAGAGGCAGAGGACGTGGTAGAGGAAGAGGCAGAGGTAGAGGGAACTACAATGGTCCATCTGAGTATCAGGGCGATGGTTGGGATGGAGGGCAAGGCTTTGGAAGTAGAGGTCGTGGACGTGGACGAGGTCGTGCATTTCGTGGAAGAGGACGCGGTTATGGTTACCAATCAGGTGGATATTTTGATTATGGTGATCCTATGGCACCACCAGTACCTGGTGAGTATCCTCTTGGTTTTGCAGGGCGTGGTCGGGGCAGGGGGCGGGCTCGTGGCCGTGGTGGTTTTTATCGATCAGATGGTCCAGTTCAAGCAGCAGCTGCTTGA

Protein sequence

MGQLGRRGNVKWAQLHRESADSEDGGGGLVDGSDRGGLRAMDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINKTVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDASSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRARGRGGFYRSDGPVQAAAA
Homology
[Close]
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match: RP25L_MOUSE (Ribonuclease P protein subunit p25-like protein OS=Mus musculus GN=Rpp25l PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.9e-14
Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENS------PINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGM 100
           M++Y+R    +L  S      P +  E+R+    ++RN +  A   L+   +  +V  G 
Sbjct: 1   MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGS 60

Query: 101 GRAINKTVMIAELIKRRIACLHQSTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSII 160
           GRA  K V  AE++KRR+  LHQ T +      D W P   + GL PL   RHV  V ++
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVL 120

Query: 161 LSKNELDASSTGYQSP 169
           LS++ LD S  GYQ P
Sbjct: 121 LSRDPLDPSECGYQPP 136

[Close]
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match: RP25L_HUMAN (Ribonuclease P protein subunit p25-like protein OS=Homo sapiens GN=RPP25L PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.0e-13
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 1 

Query: 41  MDRYQR---VEKPK---LENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGM 100
           M+ Y++   VE P    +   P +  E+R+    ++RN +  A   L+   +  +V  G 
Sbjct: 1   MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGS 60

Query: 101 GRAINKTVMIAELIKRRIACLHQSTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSII 160
           GRA  K V  AE++KRR+  LHQ T +      D W P   + GL PL   RHV  V ++
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVL 120

Query: 161 LSKNELDASSTGYQSP 169
           LS++ LD +  GYQ P
Sbjct: 121 LSRDPLDPNECGYQPP 136

[Close]
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match: RPP25_RAT (Ribonuclease P protein subunit p25 OS=Rattus norvegicus GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-12
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1 

Query: 62  IRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINKTVMIAELIKRRIACLHQSTAI 121
           +R+    ++RN + +AT  +    +  IV  G GRA  KTV  AE++KRR+A LHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 122 GSTDITDMWEPLEEGLLP----------LETTRHVSMVSIILSKNELDASSTGYQSP 169
               + ++W+ L  G  P          L   ++V  ++I+LSK+ LD    GYQ P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match: RPP25_MOUSE (Ribonuclease P protein subunit p25 OS=Mus musculus GN=Rpp25 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-12
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1 

Query: 62  IRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINKTVMIAELIKRRIACLHQSTAI 121
           +R+    ++RN + +AT  +    +  IV  G GRA  KTV  AE++KRR+A LHQ T +
Sbjct: 38  MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLAGLHQVTRL 97

Query: 122 GSTDITDMWEPLEEGLLP----------LETTRHVSMVSIILSKNELDASSTGYQSP 169
               + ++W+ L  G  P          L   ++V  ++I+LSK+ LD    GYQ P
Sbjct: 98  RYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDPRQLGYQPP 154

[Close]
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match: RP25L_BOVIN (Ribonuclease P protein subunit p25-like protein OS=Bos taurus GN=RPP25L PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.4e-12
Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 1 

Query: 41  MDRYQR---VEKPK---LENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGM 100
           M+ Y++   VE P    +   P +  E+R+    ++RN +  A   L+   +  +V  G 
Sbjct: 1   MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGS 60

Query: 101 GRAINKTVMIAELIKRRIACLHQSTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSII 160
           GRA  K V  AE++KRR+  L+Q T +      D W P   + GL PL    HV  V ++
Sbjct: 61  GRAAGKAVSCAEIVKRRVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVL 120

Query: 161 LSKNELDASSTGYQSP 169
           LS++ LD +  GYQ P
Sbjct: 121 LSRDPLDPNEYGYQPP 136

[Close]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match: A0A0A0KHW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486720 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-122
Identity = 233/257 (90.66%), Postives = 242/257 (94.16%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK EN+PINENEIRITTQGRMRNYITYATTLLQ+K SNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRI  LHQ+TAIGSTDITDMWEPLEEGLLPLETTRHVSMVSI LSK ELD 
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 220
           SSTGYQSPLPVDQVKPWNE ED+G+GSPR RGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 221 QGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRAR 280
           +GFG RGRGRGRGRAFRGRGRGYG QSGGY+DYG+PMAPPVPG    GFAGRGRGRGRAR
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGR---GFAGRGRGRGRAR 240

Query: 281 GRGGFYRSDGPVQAAAA 298
           GRGG+YRSDGPVQAAAA
Sbjct: 241 GRGGYYRSDGPVQAAAA 254

[Close]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match: V4UNX6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026333mg PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99
Identity = 204/259 (78.76%), Postives = 218/259 (84.17%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK E +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAE-APINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRIA LHQ+T+IGSTDITDMWEPLEEGLLPLETTRHVSM++I LSK +LD 
Sbjct: 61  TVMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKDLDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGR-GRGRGRGRGN-YNGPSEYQGDGWD 220
           SSTGYQ PLP DQVKPWNE ED+GEGSPRGRGRGR GRGRGRGRG  YNG  +Y  DGWD
Sbjct: 121 SSTGYQPPLPADQVKPWNEFEDEGEGSPRGRGRGRGGRGRGRGRGGFYNGAGDYNVDGWD 180

Query: 221 GGQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGR 280
           GG+GFG RGRGRGRGR+FRGRG GYG QSGGY+DYG+  APPV         GRGRGR R
Sbjct: 181 GGRGFGGRGRGRGRGRSFRGRGWGYGSQSGGYYDYGELEAPPVG-------RGRGRGRAR 240

Query: 281 ARGRGGFYRSDGPVQAAAA 298
            RGRG   RS GP QA  A
Sbjct: 241 GRGRGRNPRSGGPFQAVGA 251

[Close]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match: A0A067F1R4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025558mg PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-99
Identity = 204/259 (78.76%), Postives = 218/259 (84.17%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK E +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAE-APINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRIA LHQ+T+IGSTDITDMWEPLEEGLLPLETTRHVSM++I LSK +LD 
Sbjct: 61  TVMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKDLDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGR-GRGRGRGRGN-YNGPSEYQGDGWD 220
           SSTGYQ PLP DQVKPWNE ED+GEGSPRGRGRGR GRGRGRGRG  YNG  +Y  DGWD
Sbjct: 121 SSTGYQPPLPADQVKPWNEFEDEGEGSPRGRGRGRGGRGRGRGRGGFYNGAGDYNVDGWD 180

Query: 221 GGQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGR 280
           GG+GFG RGRGRGRGR+FRGRG GYG QSGGY+DYG+  APPV         GRGRGR R
Sbjct: 181 GGRGFGGRGRGRGRGRSFRGRGWGYGSQSGGYYDYGELEAPPVG-------RGRGRGRAR 240

Query: 281 ARGRGGFYRSDGPVQAAAA 298
            RGRG   RS GP QA  A
Sbjct: 241 GRGRGRNPRSGGPFQAVGA 251

[Close]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match: A0A067KSQ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09459 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.0e-97
Identity = 202/262 (77.10%), Postives = 218/262 (83.21%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK + +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAD-TPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRI  LHQ+TAIGSTDITDMWEPLEEGLLPLETTRHVSM++I  SK ELD 
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMITITFSKEELDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGR-GRGRGRGNYNGPSEYQGDGWDG 220
           SSTGYQ PLP+DQVKP NE ED+GE SPR RGRGR   GRGRGRGNYNG  EY GDGWDG
Sbjct: 121 SSTGYQPPLPIDQVKPLNEFEDEGESSPRMRGRGRDSWGRGRGRGNYNGAREYNGDGWDG 180

Query: 221 GQGFGSRGRGRGRGRAF----RGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRG 280
           G+G+G RGR RGRGR F    RGRGRG+G QS GY+DYG+  A P PG       GRGRG
Sbjct: 181 GRGYGGRGRARGRGRFFRGRGRGRGRGFGGQSSGYYDYGEFEAVPAPGR------GRGRG 240

Query: 281 RGRARGRGGFYRSDGPVQAAAA 298
           RGR RGRG  +RS+GPVQAAAA
Sbjct: 241 RGRGRGRGRGFRSEGPVQAAAA 255

[Close]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match: A0A067F0X9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025558mg PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.9e-97
Identity = 201/258 (77.91%), Postives = 215/258 (83.33%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK E +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAE-APINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRIA LHQ+T+IGSTDITDMWEPLEEGLLPLETTRHVSM++I LSK +LD 
Sbjct: 61  TVMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKDLDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGR-GRGRGRGRGNYNGPSEYQGDGWDG 220
           SSTGYQ PLP DQVKPWNE ED+GEGSPRGRGRGR GRGRGRGRG      +Y  DGWDG
Sbjct: 121 SSTGYQPPLPADQVKPWNEFEDEGEGSPRGRGRGRGGRGRGRGRG-----GDYNVDGWDG 180

Query: 221 GQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRA 280
           G+GFG RGRGRGRGR+FRGRG GYG QSGGY+DYG+  APPV         GRGRGR R 
Sbjct: 181 GRGFGGRGRGRGRGRSFRGRGWGYGSQSGGYYDYGELEAPPVG-------RGRGRGRARG 240

Query: 281 RGRGGFYRSDGPVQAAAA 298
           RGRG   RS GP QA  A
Sbjct: 241 RGRGRNPRSGGPFQAVGA 245

[Close]
BLAST of Cp4.1LG10g03260 vs. TAIR10
Match: AT1G76010.1 (AT1G76010.1 Alba DNA/RNA-binding protein)

HSP 1 Score: 249.2 bits (635), Expect = 3.2e-66
Identity = 166/288 (57.64%), Postives = 193/288 (67.01%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MD+YQRV KPK + +PI+ NEIRIT+QGR RNYITYA TLLQDK S E+V K MGRAINK
Sbjct: 1   MDKYQRVVKPKAD-TPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TV I ELIKRRI  LHQ+T+IGSTDITD WEP EEGLLPLETTRHVSM++I LSK EL+ 
Sbjct: 61  TVTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDG-EGSPRGRGRGRGRGRGR-----GRGNYNGPSEYQG 220
           SS GYQ P+P++ VKP  +++ +G EGSP GRGRGRGRGRGR     GRGN     E++ 
Sbjct: 121 SSVGYQCPIPIELVKPMGDIDYEGREGSPGGRGRGRGRGRGRGRGRGGRGNAYVNVEHED 180

Query: 221 DGWDGGQGFGSRGRGRGRGRAFRGRGR----------------GYGY----QSGGYFDYG 280
            GW+  Q +G RGRGRGRGR+ RGRGR                GYGY    +  GY D G
Sbjct: 181 GGWEREQSYG-RGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGGYGYDAPHEHRGYDDRG 240

Query: 281 DPMAPPVPGEYPLGFAGRG-----RGR----GRARGRGGFYRSDGPVQ 294
              APP       G  GRG     +GR    G  +GRGG+   DGP Q
Sbjct: 241 GYDAPPQGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGY---DGPSQ 283

[Close]
BLAST of Cp4.1LG10g03260 vs. TAIR10
Match: AT1G20220.1 (AT1G20220.1 Alba DNA/RNA-binding protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-60
Identity = 151/257 (58.75%), Postives = 178/257 (69.26%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MD+YQRVEKPK + +PI ENEIRIT+ GR RNYITYA  LLQ+ +SNE++ K MGRAINK
Sbjct: 1   MDKYQRVEKPKAD-TPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           +V I ELIKRRI  LHQ T+IGSTDITD WEP EEGL  +ETTRHVSM++I LSK +L+ 
Sbjct: 61  SVTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDG-EGSPRGRG--RGR-GRGRGRGRGNY-NGPSEYQGD 220
           SS GYQ P+P++ VKP  E++ +G +GSPRGRG  RGR GRGRGRGRG   NGP+  + D
Sbjct: 121 SSVGYQCPIPIEMVKPLAEIDYEGQDGSPRGRGGRRGRGGRGRGRGRGGRGNGPANVEYD 180

Query: 221 GWDGGQGFGSRGRG--------RGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPL 280
             DGG+G G RG G         GRGR     GRG GY +  Y D G         E   
Sbjct: 181 --DGGRGRGGRGNGYVNNEYDDGGRGRG----GRGSGYVNNEYNDGG--------MEQDR 240

Query: 281 GFAGRGRGRGRARGRGG 285
            + GRGRGRGR  GRGG
Sbjct: 241 SY-GRGRGRGRGGGRGG 241

[Close]
BLAST of Cp4.1LG10g03260 vs. TAIR10
Match: AT3G07030.1 (AT3G07030.1 Alba DNA/RNA-binding protein)

HSP 1 Score: 171.8 bits (434), Expect = 6.4e-43
Identity = 87/136 (63.97%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRV KPK E SPINENEIRIT++G +RNYI+YAT+LLQ+K   +IV+K MG+AI+K
Sbjct: 1   MDRYQRVAKPKPE-SPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TV I+E++K +I  LHQ  AI S  ITD+WEP EEGL P+E TRHVSM+SI LS +EL+ 
Sbjct: 61  TVAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNK 120

Query: 161 SSTGYQSPLPVDQVKP 177
            S GYQ+P   DQ KP
Sbjct: 121 DSPGYQAPAQSDQSKP 135

[Close]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match: gi|449448448|ref|XP_004141978.1| (PREDICTED: ribonuclease P protein subunit p25-like protein [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-122
Identity = 233/257 (90.66%), Postives = 242/257 (94.16%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK EN+PINENEIRITTQGRMRNYITYATTLLQ+K SNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRI  LHQ+TAIGSTDITDMWEPLEEGLLPLETTRHVSMVSI LSK ELD 
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 220
           SSTGYQSPLPVDQVKPWNE ED+G+GSPR RGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 221 QGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRAR 280
           +GFG RGRGRGRGRAFRGRGRGYG QSGGY+DYG+PMAPPVPG    GFAGRGRGRGRAR
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGR---GFAGRGRGRGRAR 240

Query: 281 GRGGFYRSDGPVQAAAA 298
           GRGG+YRSDGPVQAAAA
Sbjct: 241 GRGGYYRSDGPVQAAAA 254

[Close]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match: gi|659080813|ref|XP_008440994.1| (PREDICTED: ribonuclease P protein subunit p25-like protein [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 2.9e-122
Identity = 232/257 (90.27%), Postives = 242/257 (94.16%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK EN+PINENEIRITTQGRMRNYITYATT+LQ+K SNEIVVKGMGRAINK
Sbjct: 1   MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTILQEKGSNEIVVKGMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRI  LHQ+TAIGSTDITDMWEPLEEGLLPLETTRHVSMVSI LSK ELD 
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSITLSKKELDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 220
           SSTGYQSPLPVDQVKPWNE ED+G+GSPR RGRGRGRGRGRGRGNYNGPSEYQGDGWDGG
Sbjct: 121 SSTGYQSPLPVDQVKPWNEFEDEGDGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGG 180

Query: 221 QGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRAR 280
           +GFG RGRGRGRGRAFRGRGRGYG QSGGY+DYG+PMAPPVPG    GFAGRGRGRGRAR
Sbjct: 181 RGFGPRGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGR---GFAGRGRGRGRAR 240

Query: 281 GRGGFYRSDGPVQAAAA 298
           GRGG+YRSDGPVQAAAA
Sbjct: 241 GRGGYYRSDGPVQAAAA 254

[Close]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match: gi|567870555|ref|XP_006427899.1| (hypothetical protein CICLE_v10026333mg [Citrus clementina])

HSP 1 Score: 370.2 bits (949), Expect = 3.5e-99
Identity = 204/259 (78.76%), Postives = 218/259 (84.17%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK E +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAE-APINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRIA LHQ+T+IGSTDITDMWEPLEEGLLPLETTRHVSM++I LSK +LD 
Sbjct: 61  TVMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKDLDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGR-GRGRGRGRGN-YNGPSEYQGDGWD 220
           SSTGYQ PLP DQVKPWNE ED+GEGSPRGRGRGR GRGRGRGRG  YNG  +Y  DGWD
Sbjct: 121 SSTGYQPPLPADQVKPWNEFEDEGEGSPRGRGRGRGGRGRGRGRGGFYNGAGDYNVDGWD 180

Query: 221 GGQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGR 280
           GG+GFG RGRGRGRGR+FRGRG GYG QSGGY+DYG+  APPV         GRGRGR R
Sbjct: 181 GGRGFGGRGRGRGRGRSFRGRGWGYGSQSGGYYDYGELEAPPVG-------RGRGRGRAR 240

Query: 281 ARGRGGFYRSDGPVQAAAA 298
            RGRG   RS GP QA  A
Sbjct: 241 GRGRGRNPRSGGPFQAVGA 251

[Close]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match: gi|802615669|ref|XP_012075290.1| (PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas])

HSP 1 Score: 364.8 bits (935), Expect = 1.5e-97
Identity = 202/262 (77.10%), Postives = 218/262 (83.21%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK + +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAD-TPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRI  LHQ+TAIGSTDITDMWEPLEEGLLPLETTRHVSM++I  SK ELD 
Sbjct: 61  TVMIAELIKRRIVGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMITITFSKEELDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGRGR-GRGRGRGNYNGPSEYQGDGWDG 220
           SSTGYQ PLP+DQVKP NE ED+GE SPR RGRGR   GRGRGRGNYNG  EY GDGWDG
Sbjct: 121 SSTGYQPPLPIDQVKPLNEFEDEGESSPRMRGRGRDSWGRGRGRGNYNGAREYNGDGWDG 180

Query: 221 GQGFGSRGRGRGRGRAF----RGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRG 280
           G+G+G RGR RGRGR F    RGRGRG+G QS GY+DYG+  A P PG       GRGRG
Sbjct: 181 GRGYGGRGRARGRGRFFRGRGRGRGRGFGGQSSGYYDYGEFEAVPAPGR------GRGRG 240

Query: 281 RGRARGRGGFYRSDGPVQAAAA 298
           RGR RGRG  +RS+GPVQAAAA
Sbjct: 241 RGRGRGRGRGFRSEGPVQAAAA 255

[Close]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match: gi|641838201|gb|KDO57147.1| (hypothetical protein CISIN_1g025558mg [Citrus sinensis])

HSP 1 Score: 362.8 bits (930), Expect = 5.5e-97
Identity = 201/258 (77.91%), Postives = 215/258 (83.33%), Query Frame = 1 

Query: 41  MDRYQRVEKPKLENSPINENEIRITTQGRMRNYITYATTLLQDKESNEIVVKGMGRAINK 100
           MDRYQRVEKPK E +PINENEIRITTQGRMRNYITYATTLLQ+K SNEIV+K MGRAINK
Sbjct: 1   MDRYQRVEKPKAE-APINENEIRITTQGRMRNYITYATTLLQEKGSNEIVLKAMGRAINK 60

Query: 101 TVMIAELIKRRIACLHQSTAIGSTDITDMWEPLEEGLLPLETTRHVSMVSIILSKNELDA 160
           TVMIAELIKRRIA LHQ+T+IGSTDITDMWEPLEEGLLPLETTRHVSM++I LSK +LD 
Sbjct: 61  TVMIAELIKRRIAGLHQNTSIGSTDITDMWEPLEEGLLPLETTRHVSMITITLSKKDLDT 120

Query: 161 SSTGYQSPLPVDQVKPWNELEDDGEGSPRGRGRGR-GRGRGRGRGNYNGPSEYQGDGWDG 220
           SSTGYQ PLP DQVKPWNE ED+GEGSPRGRGRGR GRGRGRGRG      +Y  DGWDG
Sbjct: 121 SSTGYQPPLPADQVKPWNEFEDEGEGSPRGRGRGRGGRGRGRGRG-----GDYNVDGWDG 180

Query: 221 GQGFGSRGRGRGRGRAFRGRGRGYGYQSGGYFDYGDPMAPPVPGEYPLGFAGRGRGRGRA 280
           G+GFG RGRGRGRGR+FRGRG GYG QSGGY+DYG+  APPV         GRGRGR R 
Sbjct: 181 GRGFGGRGRGRGRGRSFRGRGWGYGSQSGGYYDYGELEAPPVG-------RGRGRGRARG 240

Query: 281 RGRGGFYRSDGPVQAAAA 298
           RGRG   RS GP QA  A
Sbjct: 241 RGRGRNPRSGGPFQAVGA 245

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g03260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RP25L_MOUSE5.9e-1435.29Ribonuclease P protein subunit p25-like protein OS=Mus musculus GN=Rpp25l PE=1 S... [more]
RP25L_HUMAN5.0e-1334.56Ribonuclease P protein subunit p25-like protein OS=Homo sapiens GN=RPP25L PE=1 S... [more]
RPP25_RAT2.5e-1234.19Ribonuclease P protein subunit p25 OS=Rattus norvegicus GN=Rpp25 PE=2 SV=1[more]
RPP25_MOUSE2.5e-1234.19Ribonuclease P protein subunit p25 OS=Mus musculus GN=Rpp25 PE=2 SV=1[more]
RP25L_BOVIN9.4e-1233.09Ribonuclease P protein subunit p25-like protein OS=Bos taurus GN=RPP25L PE=2 SV=... [more]
BLAST of Cp4.1LG10g03260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHW5_CUCSA1.2e-12290.66Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486720 PE=4 SV=1[more]
V4UNX6_9ROSI2.4e-9978.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026333mg PE=4 SV=1[more]
A0A067F1R4_CITSI2.4e-9978.76Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025558mg PE=4 SV=1[more]
A0A067KSQ6_JATCU1.0e-9777.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09459 PE=4 SV=1[more]
A0A067F0X9_CITSI3.9e-9777.91Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025558mg PE=4 SV=1[more]
BLAST of Cp4.1LG10g03260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76010.13.2e-6657.64 Alba DNA/RNA-binding protein[more]
AT1G20220.12.0e-6058.75 Alba DNA/RNA-binding protein[more]
AT3G07030.16.4e-4363.97 Alba DNA/RNA-binding protein[more]
BLAST of Cp4.1LG10g03260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448448|ref|XP_004141978.1|1.7e-12290.66PREDICTED: ribonuclease P protein subunit p25-like protein [Cucumis sativus][more]
gi|659080813|ref|XP_008440994.1|2.9e-12290.27PREDICTED: ribonuclease P protein subunit p25-like protein [Cucumis melo][more]
gi|567870555|ref|XP_006427899.1|3.5e-9978.76hypothetical protein CICLE_v10026333mg [Citrus clementina][more]
gi|802615669|ref|XP_012075290.1|1.5e-9777.10PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas][more]
gi|641838201|gb|KDO57147.1|5.5e-9777.91hypothetical protein CISIN_1g025558mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR002775DNA/RNA-bd_Alba-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0008033 tRNA processing
biological_process GO:0006397 mRNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0030677 ribonuclease P complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0004526 ribonuclease P activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g03260.1Cp4.1LG10g03260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002775DNA/RNA-binding protein Alba-likeGENE3DG3DSA:3.30.110.20coord: 53..156
score: 8.1
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 60..124
score: 1.1
IPR002775DNA/RNA-binding protein Alba-likeunknownSSF82704AlbA-likecoord: 57..170
score: 1.83
NoneNo IPR availablePANTHERPTHR13516RIBONUCLEASE P SUBUNIT P25coord: 268..296
score: 3.8E-124coord: 42..251
score: 3.8E
NoneNo IPR availablePANTHERPTHR13516:SF9SUBFAMILY NOT NAMEDcoord: 268..296
score: 3.8E-124coord: 42..251
score: 3.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g03260Cucsa.101310Cucumber (Gy14) v1cgycpeB0211
Cp4.1LG10g03260CmaCh03G010650Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g03260CmaCh07G007760Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g03260CmoCh07G008000Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g03260CmoCh03G010620Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g03260Cla008467Watermelon (97103) v1cpewmB075
Cp4.1LG10g03260Csa6G486720Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g03260MELO3C008020Melon (DHL92) v3.5.1cpemeB069
Cp4.1LG10g03260ClCG01G015780Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g03260CSPI06G26900Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g03260Lsi01G011180Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g03260MELO3C008020.2Melon (DHL92) v3.6.1cpemedB092
Cp4.1LG10g03260CsaV3_6G042050Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g03260Bhi03G001082Wax gourdcpewgoB0087
Cp4.1LG10g03260CsGy6G026280Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g03260Carg05287Silver-seed gourdcarcpeB1128
Cp4.1LG10g03260Carg10562Silver-seed gourdcarcpeB0337
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g03260Cucurbita pepo (Zucchini)cpecpeB068
Cp4.1LG10g03260Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g03260Cucurbita pepo (Zucchini)cpecpeB098
Cp4.1LG10g03260Cucumber (Gy14) v1cgycpeB0663
Cp4.1LG10g03260Cucurbita maxima (Rimu)cmacpeB599
Cp4.1LG10g03260Cucurbita moschata (Rifu)cmocpeB547
Cp4.1LG10g03260Cucurbita moschata (Rifu)cmocpeB548
Cp4.1LG10g03260Wild cucumber (PI 183967)cpecpiB057
Cp4.1LG10g03260Watermelon (Charleston Gray)cpewcgB066
Cp4.1LG10g03260Watermelon (97103) v1cpewmB093
Cp4.1LG10g03260Cucumber (Gy14) v2cgybcpeB156
Cp4.1LG10g03260Silver-seed gourdcarcpeB1470
Cp4.1LG10g03260Silver-seed gourdcarcpeB1471
Cp4.1LG10g03260Wax gourdcpewgoB0083